AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036288.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036288.01.T01 MTR_7g010920 96.918 292 9 0 15 306 17 308 0.0 593
MsG0780036288.01.T01 MTR_2g064415 38.542 96 58 1 81 175 146 241 9.36e-20 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036288.01.T01 AT3G28970 50.179 279 90 4 36 292 40 291 8.36e-82 249
MsG0780036288.01.T01 AT3G28970 47.670 279 90 5 36 292 40 284 1.17e-72 226
MsG0780036288.01.T01 AT3G12760 38.983 118 67 2 64 176 126 243 5.27e-22 93.2

Find 66 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACTTTCTGATGATTTA+TGG 0.134739 7:-6016320 MsG0780036288.01.T01:three_prime_UTR
GCTTGGAAATTAGTTCTTAA+TGG 0.193823 7:-6019369 MsG0780036288.01.T01:CDS
GTATATACTTAAACTATAAA+AGG 0.225290 7:+6016526 None:intergenic
TTCTTCATGTGTCGTGAAAA+TGG 0.285875 7:-6019541 MsG0780036288.01.T01:CDS
TCTTTATCAAAGGGATTTGC+AGG 0.312985 7:-6016615 MsG0780036288.01.T01:CDS
CTTGGAAATTAGTTCTTAAT+GGG 0.328992 7:-6019368 MsG0780036288.01.T01:CDS
CCCGAATCTCTGTCAATTCC+TGG 0.339087 7:-6017191 MsG0780036288.01.T01:intron
ACTGACACAGTTGTCGAAAT+TGG 0.351775 7:-6021557 MsG0780036288.01.T01:CDS
GTCGATGCTCATGTCACGGC+TGG 0.379662 7:-6019932 MsG0780036288.01.T01:CDS
CATGTCACGGCTGGGTTTGA+TGG 0.382201 7:-6019923 MsG0780036288.01.T01:intron
CCAGGAATTGACAGAGATTC+GGG 0.386277 7:+6017191 None:intergenic
GTTTGTGCAGATATAAAATC+AGG 0.388294 7:-6021655 MsG0780036288.01.T01:CDS
ACCAGGAATTGACAGAGATT+CGG 0.411060 7:+6017190 None:intergenic
ACAAAATCATCTATTAAAAC+AGG 0.431309 7:+6018621 None:intergenic
TCCTCTGCTGCATTCCCTTG+TGG 0.433158 7:+6016705 None:intergenic
AAGTCCCAATGTTCAGTTGA+AGG 0.434913 7:-6016639 MsG0780036288.01.T01:CDS
GGAAGCAAGAAAAGACGATA+TGG 0.438124 7:-6016811 MsG0780036288.01.T01:CDS
ATCTGAGGATACGTGGCAAC+AGG 0.440502 7:-6018935 MsG0780036288.01.T01:CDS
GCATTTGTTGTTGGTGAAGA+AGG 0.443323 7:-6021628 MsG0780036288.01.T01:CDS
AACAATACCTTCAGGATCAT+AGG 0.449382 7:+6018873 None:intergenic
TTCAGAAGGCTAAGGTATCA+AGG 0.453806 7:-6021585 MsG0780036288.01.T01:CDS
GTTGAAGGTTCTTTATCAAA+GGG 0.457296 7:-6016624 MsG0780036288.01.T01:CDS
AGAACCTTCAACTGAACATT+GGG 0.463296 7:+6016635 None:intergenic
TCAGGACATGCATTTGTTGT+TGG 0.472036 7:-6021637 MsG0780036288.01.T01:CDS
ACTAGTTCCTATGTACGGTT+TGG 0.488365 7:-6016582 MsG0780036288.01.T01:CDS
AGTTGAAGGTTCTTTATCAA+AGG 0.491994 7:-6016625 MsG0780036288.01.T01:CDS
GGTTTCCACTGCTTCAGCCA+TGG 0.492666 7:-6019344 MsG0780036288.01.T01:CDS
GTGGAATCTAGAGTTTGTAC+AGG 0.496706 7:-6021535 MsG0780036288.01.T01:CDS
TTCAACTGAACATTGGGACT+TGG 0.500557 7:+6016641 None:intergenic
GAATGCAGCAGAGGAATGTA+TGG 0.500725 7:-6016697 MsG0780036288.01.T01:CDS
TAAGCAAGGCACTAACTGCT+TGG 0.506583 7:-6019386 MsG0780036288.01.T01:CDS
GAACCGAGAAAACTCGGAAA+AGG 0.509010 7:+6019576 None:intergenic
AAATACATTCGACTAGCAAA+AGG 0.518867 7:+6016498 None:intergenic
TTCATAGAACCGAGAAAACT+CGG 0.519204 7:+6019570 None:intergenic
AAGAACCTTCAACTGAACAT+TGG 0.530073 7:+6016634 None:intergenic
TCGATGCTCATGTCACGGCT+GGG 0.538429 7:-6019931 MsG0780036288.01.T01:CDS
ATAATTTACAGCGGTAAGCA+AGG 0.568351 7:-6019400 MsG0780036288.01.T01:intron
TCCAACATCCACTGTAACTG+TGG 0.568417 7:-6017218 MsG0780036288.01.T01:CDS
GACACAGTTGTCGAAATTGG+TGG 0.569386 7:-6021554 MsG0780036288.01.T01:CDS
AACTGTCGATGCTCATGTCA+CGG 0.573372 7:-6019936 MsG0780036288.01.T01:CDS
TCAGAAGGCTAAGGTATCAA+GGG 0.574939 7:-6021584 MsG0780036288.01.T01:CDS
GCCATGGTGTGACTTTGTTG+AGG 0.576084 7:-6019328 MsG0780036288.01.T01:intron
CATTTGTTGTTGGTGAAGAA+GGG 0.577921 7:-6021627 MsG0780036288.01.T01:CDS
TCTCAACTAGTTCCTATGTA+CGG 0.578114 7:-6016587 MsG0780036288.01.T01:CDS
TCACACCATGGCTGAAGCAG+TGG 0.579870 7:+6019339 None:intergenic
TGGTGAAGAAGGGTATAGAC+AGG 0.591795 7:-6021617 MsG0780036288.01.T01:CDS
ACCACAGTTACAGTGGATGT+TGG 0.592385 7:+6017217 None:intergenic
TTATTGTTCTGCAGGCAACC+AGG 0.601075 7:-6017257 MsG0780036288.01.T01:intron
CTCTCTACCAAACCGTACAT+AGG 0.602331 7:+6016575 None:intergenic
TCCACAAGGGAATGCAGCAG+AGG 0.604535 7:-6016706 MsG0780036288.01.T01:CDS
CTAGATGCCTATGATCCTGA+AGG 0.604779 7:-6018880 MsG0780036288.01.T01:intron
TTATGGTTTAGTAGATTGTG+AGG 0.607239 7:-6016733 MsG0780036288.01.T01:CDS
TGGGACTTGGATGAACACAC+AGG 0.611343 7:+6016654 None:intergenic
GGAAATTAGTTCTTAATGGG+CGG 0.614712 7:-6019365 MsG0780036288.01.T01:CDS
TCTAAAGAGGAAGTTAGCTG+AGG 0.640393 7:-6016832 MsG0780036288.01.T01:CDS
CGGGATCACCACAGTTACAG+TGG 0.655332 7:+6017210 None:intergenic
CGGTTTGGTAGAGAGAGGAG+AGG 0.657217 7:-6016567 MsG0780036288.01.T01:CDS
TGGAATCTAGAGTTTGTACA+GGG 0.668019 7:-6021534 MsG0780036288.01.T01:intron
GATTGTGAGGACAATCCACA+AGG 0.669114 7:-6016720 MsG0780036288.01.T01:CDS
ATGTACGGTTTGGTAGAGAG+AGG 0.675580 7:-6016572 MsG0780036288.01.T01:CDS
GAAGGCTAAGGTATCAAGGG+AGG 0.676555 7:-6021581 MsG0780036288.01.T01:CDS
TCAACGATACAACATATCTG+AGG 0.678525 7:-6018950 MsG0780036288.01.T01:CDS
ACAACATATCTGAGGATACG+TGG 0.679333 7:-6018942 MsG0780036288.01.T01:CDS
GGGACTTGGATGAACACACA+GGG 0.701412 7:+6016655 None:intergenic
ACCTCAACAAAGTCACACCA+TGG 0.717123 7:+6019327 None:intergenic
ATTGTGAGGACAATCCACAA+GGG 0.748048 7:-6016719 MsG0780036288.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTTTTCTTTTTTGTTT+GGG + Chr7:6018198-6018217 None:intergenic 10.0%
!!! ATAATTTTTAAGTTGAATTT+CGG - Chr7:6020471-6020490 MsG0780036288.01.T01:intron 10.0%
!!! TAAAATTTTTCTTTTTTGTT+TGG + Chr7:6018199-6018218 None:intergenic 10.0%
!!! TATTTTCATTTAATTTCTAT+TGG - Chr7:6018984-6019003 MsG0780036288.01.T01:intron 10.0%
!!! TGTTTTTCTTTTTTAAATTA+CGG + Chr7:6017895-6017914 None:intergenic 10.0%
!!! TTGTTTTAATATAAGTTATT+TGG + Chr7:6021020-6021039 None:intergenic 10.0%
!! AGCAAAATAAATCATATTAT+GGG + Chr7:6016803-6016822 None:intergenic 15.0%
!! ATACATTGTTATATATCTTT+GGG - Chr7:6017003-6017022 MsG0780036288.01.T01:intron 15.0%
!! CTTAAAAATTATTGAAAGAT+AGG + Chr7:6020463-6020482 None:intergenic 15.0%
!! GTATATACTTAAACTATAAA+AGG + Chr7:6021465-6021484 None:intergenic 15.0%
!! TAAAAAATTAAAACTTATGC+TGG + Chr7:6017128-6017147 None:intergenic 15.0%
!! TATAGATTTATGAAGTTTAA+GGG - Chr7:6017699-6017718 MsG0780036288.01.T01:intron 15.0%
!!! AATTAATATTTTGTTGGTTT+TGG - Chr7:6019535-6019554 MsG0780036288.01.T01:CDS 15.0%
!!! TATCAAATTTTGAAAAACAA+AGG + Chr7:6018571-6018590 None:intergenic 15.0%
!!! TGGATTAATTAATATTTTGT+TGG - Chr7:6019529-6019548 MsG0780036288.01.T01:CDS 15.0%
!! AAATTATTGAAAGATAGGAT+TGG + Chr7:6020458-6020477 None:intergenic 20.0%
!! AAGTTGTATAAGATATTGAA+AGG - Chr7:6017201-6017220 MsG0780036288.01.T01:CDS 20.0%
!! AATAAGTTAAAAGCAGTTAA+TGG + Chr7:6020985-6021004 None:intergenic 20.0%
!! ACAAAATCATCTATTAAAAC+AGG + Chr7:6019370-6019389 None:intergenic 20.0%
!! CAGCAAAATAAATCATATTA+TGG + Chr7:6016804-6016823 None:intergenic 20.0%
!! CATAAGATTAATAAATAGGT+CGG - Chr7:6019785-6019804 MsG0780036288.01.T01:intron 20.0%
!! GACCTATTTATTAATCTTAT+GGG + Chr7:6019786-6019805 None:intergenic 20.0%
!! GATACATTGTTATATATCTT+TGG - Chr7:6017002-6017021 MsG0780036288.01.T01:intron 20.0%
!! GTATAGATTTATGAAGTTTA+AGG - Chr7:6017698-6017717 MsG0780036288.01.T01:intron 20.0%
!! TACATTGTTATATATCTTTG+GGG - Chr7:6017004-6017023 MsG0780036288.01.T01:intron 20.0%
!! TGAATGTGGTTAAAAAAATA+AGG + Chr7:6018098-6018117 None:intergenic 20.0%
!!! AAACACTTGTATGATTTTTT+GGG - Chr7:6020930-6020949 MsG0780036288.01.T01:intron 20.0%
!!! AATTCAAGTTGTTCAATTTA+TGG - Chr7:6016527-6016546 MsG0780036288.01.T01:three_prime_UTR 20.0%
!!! ACATCTTTTAACTAGTTTTT+TGG - Chr7:6020419-6020438 MsG0780036288.01.T01:intron 20.0%
!!! ATTCTTTTTAACCTGATATA+GGG - Chr7:6018854-6018873 MsG0780036288.01.T01:intron 20.0%
!!! ATTTTGATTCAAATGAAAAC+TGG + Chr7:6017235-6017254 None:intergenic 20.0%
!!! CAAAATTTGATAATTTACAG+CGG - Chr7:6018579-6018598 MsG0780036288.01.T01:intron 20.0%
!!! CTATAATTCTTATTTCATCT+AGG + Chr7:6020203-6020222 None:intergenic 20.0%
!!! GAATGTATTTCATCATATTT+TGG - Chr7:6019736-6019755 MsG0780036288.01.T01:intron 20.0%
!!! TAAACACTTGTATGATTTTT+TGG - Chr7:6020929-6020948 MsG0780036288.01.T01:intron 20.0%
!!! TTTGAAAGATATCTAGAATT+TGG - Chr7:6019871-6019890 MsG0780036288.01.T01:intron 20.0%
!!! TTTTTCGATAAGTATGATTT+AGG - Chr7:6019662-6019681 MsG0780036288.01.T01:intron 20.0%
!!! TTTTTTACAATTTGAGGTTT+CGG - Chr7:6017477-6017496 MsG0780036288.01.T01:intron 20.0%
! AAAAATTAAATGCTTGAGCA+CGG + Chr7:6017051-6017070 None:intergenic 25.0%
! AAAATTAAAACTTATGCTGG+TGG + Chr7:6017125-6017144 None:intergenic 25.0%
! AAATTAAAACTTATGCTGGT+GGG + Chr7:6017124-6017143 None:intergenic 25.0%
! AAGATAAGTGACTTATCATT+TGG - Chr7:6020305-6020324 MsG0780036288.01.T01:intron 25.0%
! AGAATGTTATAAAAGATGTG+TGG - Chr7:6018770-6018789 MsG0780036288.01.T01:intron 25.0%
! ATAAATCATATTATGGGAAC+TGG + Chr7:6016797-6016816 None:intergenic 25.0%
! CAGAACAATAAACTAAACAA+AGG + Chr7:6020722-6020741 None:intergenic 25.0%
! CGACCTATTTATTAATCTTA+TGG + Chr7:6019787-6019806 None:intergenic 25.0%
! GTCCCATAAGATTAATAAAT+AGG - Chr7:6019781-6019800 MsG0780036288.01.T01:intron 25.0%
! TAAATCATATTATGGGAACT+GGG + Chr7:6016796-6016815 None:intergenic 25.0%
! TAAGTATTTCGAATTCAACA+AGG + Chr7:6018719-6018738 None:intergenic 25.0%
! TAATAAAGTGCATTTAAACG+AGG - Chr7:6017078-6017097 MsG0780036288.01.T01:intron 25.0%
! TCATTTGAATCAAAATTAGC+TGG - Chr7:6017239-6017258 MsG0780036288.01.T01:CDS 25.0%
! TCTATAATTGCTACAGATTT+AGG - Chr7:6019933-6019952 MsG0780036288.01.T01:CDS 25.0%
! TGTAAAAAAAGTAGAGCTTA+TGG - Chr7:6021238-6021257 MsG0780036288.01.T01:intron 25.0%
! TTCTCTGATGAATTTGTATA+TGG - Chr7:6020581-6020600 MsG0780036288.01.T01:intron 25.0%
! TTCTTGAATATGATTACTTG+AGG - Chr7:6019255-6019274 MsG0780036288.01.T01:intron 25.0%
! TTGATAAATGTTGAACTCAA+TGG - Chr7:6020670-6020689 MsG0780036288.01.T01:intron 25.0%
!! AAGTTTTGCAACCTAATTTT+TGG - Chr7:6020636-6020655 MsG0780036288.01.T01:intron 25.0%
!! ACACATCTTTTATAACATTC+TGG + Chr7:6018771-6018790 None:intergenic 25.0%
!! ACTTTTTACAATTAGCTACA+TGG - Chr7:6019148-6019167 MsG0780036288.01.T01:intron 25.0%
!! ATGCAATTTTGTGAACATTT+AGG + Chr7:6017955-6017974 None:intergenic 25.0%
!! ATTTCACATGTCAAATTTTC+AGG - Chr7:6018013-6018032 MsG0780036288.01.T01:intron 25.0%
!! CTTGGAAATTAGTTCTTAAT+GGG - Chr7:6018620-6018639 MsG0780036288.01.T01:CDS 25.0%
!! GATTCTTTTTAACCTGATAT+AGG - Chr7:6018853-6018872 MsG0780036288.01.T01:intron 25.0%
!! GTTCTATTCAATCCTTTTAA+TGG - Chr7:6018517-6018536 MsG0780036288.01.T01:intron 25.0%
!! TAGCATGATACAAAGAATTT+TGG - Chr7:6018327-6018346 MsG0780036288.01.T01:intron 25.0%
!! TCACAAAATTTTGCAATTAG+TGG - Chr7:6020099-6020118 MsG0780036288.01.T01:intron 25.0%
!! TGCAATTTTGTGAACATTTA+GGG + Chr7:6017954-6017973 None:intergenic 25.0%
!! TTGTGATTCTTTGATAATCT+AGG - Chr7:6016825-6016844 MsG0780036288.01.T01:CDS 25.0%
!! TTTAAGTTAGAGAAGAAAGA+TGG + Chr7:6017993-6018012 None:intergenic 25.0%
!! TTTCACATGTCAAATTTTCA+GGG - Chr7:6018014-6018033 MsG0780036288.01.T01:intron 25.0%
!!! ATTTCATCATATTTTGGACA+AGG - Chr7:6019742-6019761 MsG0780036288.01.T01:intron 25.0%
!!! GCACTTTTTCATTATTTCTA+TGG - Chr7:6021543-6021562 MsG0780036288.01.T01:CDS 25.0%
!!! TCTACTTTTTTTACAGTTTG+AGG + Chr7:6021233-6021252 None:intergenic 25.0%
!!! TTACTTATTTTCTCAAGTCT+CGG - Chr7:6018883-6018902 MsG0780036288.01.T01:CDS 25.0%
!!! TTTCTCTCTAAGATGTTATT+TGG - Chr7:6016481-6016500 MsG0780036288.01.T01:three_prime_UTR 25.0%
AAATACATTCGACTAGCAAA+AGG + Chr7:6021493-6021512 None:intergenic 30.0%
AAATAGAGTGAGTTATGTCA+TGG - Chr7:6020010-6020029 MsG0780036288.01.T01:intron 30.0%
AAATCATATTATGGGAACTG+GGG + Chr7:6016795-6016814 None:intergenic 30.0%
AAATCGGTGAAGTTTATTGT+TGG + Chr7:6020358-6020377 None:intergenic 30.0%
AAGACAGTGTTAGATTAACT+GGG + Chr7:6017349-6017368 None:intergenic 30.0%
AATTGCATGATTGTACTAAG+TGG - Chr7:6017967-6017986 MsG0780036288.01.T01:intron 30.0%
ACAACTTGAATTGAACAACT+TGG + Chr7:6016519-6016538 None:intergenic 30.0%
ACAAGTAAGCAAATTTCAAG+GGG - Chr7:6019706-6019725 MsG0780036288.01.T01:intron 30.0%
ACTTAAATCTCATGAGTCAA+AGG - Chr7:6018734-6018753 MsG0780036288.01.T01:intron 30.0%
AGTCAAAGACAACAACAATA+AGG + Chr7:6017643-6017662 None:intergenic 30.0%
AGTTGAAGGTTCTTTATCAA+AGG - Chr7:6021363-6021382 MsG0780036288.01.T01:intron 30.0%
CAATAAACTAAACAAAGGTC+AGG + Chr7:6020717-6020736 None:intergenic 30.0%
CAATTATAGATTTGAGGATC+TGG + Chr7:6019923-6019942 None:intergenic 30.0%
CATTCTACTTCACCATTAAA+AGG + Chr7:6018532-6018551 None:intergenic 30.0%
CCAAAAAGTCAAACAAATAC+AGG + Chr7:6019826-6019845 None:intergenic 30.0%
CTGTAGCAATTATAGATTTG+AGG + Chr7:6019929-6019948 None:intergenic 30.0%
GACAAGTAAGCAAATTTCAA+GGG - Chr7:6019705-6019724 MsG0780036288.01.T01:intron 30.0%
GTAGACAGAAAATGTTATGT+TGG + Chr7:6018143-6018162 None:intergenic 30.0%
GTTGAAGGTTCTTTATCAAA+GGG - Chr7:6021364-6021383 MsG0780036288.01.T01:intron 30.0%
GTTTGTGCAGATATAAAATC+AGG - Chr7:6016333-6016352 MsG0780036288.01.T01:three_prime_UTR 30.0%
TAAACCTTATGTTGCGTTAA+CGG - Chr7:6016673-6016692 MsG0780036288.01.T01:CDS 30.0%
TAAAGACAACATATGAGAAC+TGG + Chr7:6019629-6019648 None:intergenic 30.0%
TAAGTCACTTATCTTCTTCA+AGG + Chr7:6020300-6020319 None:intergenic 30.0%
TATTTCCTTATATCAGTGAG+TGG + Chr7:6020849-6020868 None:intergenic 30.0%
TCAACATTTATCAAACAACG+AGG + Chr7:6020664-6020683 None:intergenic 30.0%
TGAAAAACAAAGGATAACCA+GGG + Chr7:6018561-6018580 None:intergenic 30.0%
TGTGCATTCTCTATATTATG+AGG - Chr7:6018284-6018303 MsG0780036288.01.T01:intron 30.0%
TTATGGTTTAGTAGATTGTG+AGG - Chr7:6021255-6021274 MsG0780036288.01.T01:intron 30.0%
TTCAAATAAGCCAATCCAAA+CGG + Chr7:6020895-6020914 None:intergenic 30.0%
TTGAAAAACAAAGGATAACC+AGG + Chr7:6018562-6018581 None:intergenic 30.0%
TTGCACTTTCTGATGATTTA+TGG - Chr7:6021668-6021687 MsG0780036288.01.T01:CDS 30.0%
TTTAACCTGATATAGGGTTA+GGG - Chr7:6018860-6018879 MsG0780036288.01.T01:intron 30.0%
! AAATTTTCACTCATGACTGA+AGG - Chr7:6020513-6020532 MsG0780036288.01.T01:intron 30.0%
! AATTTGAGGTTTCGGTATAT+CGG - Chr7:6017485-6017504 MsG0780036288.01.T01:intron 30.0%
! AATTTTCACTCATGACTGAA+GGG - Chr7:6020514-6020533 MsG0780036288.01.T01:intron 30.0%
! CTCCTAAATGCTTGTTAAAT+CGG + Chr7:6020374-6020393 None:intergenic 30.0%
! GATTCTTTGATAATCTAGGA+AGG - Chr7:6016829-6016848 MsG0780036288.01.T01:CDS 30.0%
! GCTTGGAAATTAGTTCTTAA+TGG - Chr7:6018619-6018638 MsG0780036288.01.T01:CDS 30.0%
! TAGTGATTTTGCTCAAAACA+TGG - Chr7:6019447-6019466 MsG0780036288.01.T01:intron 30.0%
! TCCCATTTTATATAACCCAT+GGG - Chr7:6018928-6018947 MsG0780036288.01.T01:CDS 30.0%
! TGTTTAGTTTATTGTTCTGC+AGG - Chr7:6020723-6020742 MsG0780036288.01.T01:intron 30.0%
! TTTTAACCTGATATAGGGTT+AGG - Chr7:6018859-6018878 MsG0780036288.01.T01:intron 30.0%
!! CCTGTATTTGTTTGACTTTT+TGG - Chr7:6019823-6019842 MsG0780036288.01.T01:intron 30.0%
!! GTGTTTGTTACTATTTCTGT+GGG - Chr7:6017453-6017472 MsG0780036288.01.T01:intron 30.0%
!! TGTGTTTGTTACTATTTCTG+TGG - Chr7:6017452-6017471 MsG0780036288.01.T01:intron 30.0%
!! TTTTCTTTTTTTGTGCATGC+AGG - Chr7:6019337-6019356 MsG0780036288.01.T01:CDS 30.0%
!! TTTTTGTTTGGGAAAAGAAG+AGG + Chr7:6018187-6018206 None:intergenic 30.0%
!!! ACTTTTTGGAACTTCTAGAT+GGG - Chr7:6019837-6019856 MsG0780036288.01.T01:intron 30.0%
!!! GAACTGGGGTTTTAAATAAA+AGG + Chr7:6016781-6016800 None:intergenic 30.0%
!!! GTGGGATTTTTTACAATTTG+AGG - Chr7:6017471-6017490 MsG0780036288.01.T01:intron 30.0%
!!! GTTTTTTTCGTAGTCATGAT+TGG - Chr7:6017542-6017561 MsG0780036288.01.T01:intron 30.0%
AAAAAATCCAAATGCATGGC+TGG - Chr7:6017304-6017323 MsG0780036288.01.T01:intron 35.0%
AAAAGAATCACACATGAGCT+CGG + Chr7:6018842-6018861 None:intergenic 35.0%
AACAACAATAAGGTGGAAGT+AGG + Chr7:6017633-6017652 None:intergenic 35.0%
AACAATACCTTCAGGATCAT+AGG + Chr7:6019118-6019137 None:intergenic 35.0%
AAGAACCTTCAACTGAACAT+TGG + Chr7:6021357-6021376 None:intergenic 35.0%
AAGTGTTTATGCTAGAAGAC+AGG + Chr7:6020918-6020937 None:intergenic 35.0%
ACTAGGTTGTATACATGGAT+TGG + Chr7:6018954-6018973 None:intergenic 35.0%
AGAACCTTCAACTGAACATT+GGG + Chr7:6021356-6021375 None:intergenic 35.0%
AGACAGTGTTAGATTAACTG+GGG + Chr7:6017348-6017367 None:intergenic 35.0%
ATAATTTACAGCGGTAAGCA+AGG - Chr7:6018588-6018607 MsG0780036288.01.T01:intron 35.0%
ATACTAGTATCCGTTTGGAT+TGG - Chr7:6020882-6020901 MsG0780036288.01.T01:intron 35.0%
ATCCATGTATACAACCTAGT+AGG - Chr7:6018954-6018973 MsG0780036288.01.T01:CDS 35.0%
ATCTTACATCATCACTTGCA+TGG + Chr7:6020540-6020559 None:intergenic 35.0%
ATGATGAGAACAATACCTTC+AGG + Chr7:6019126-6019145 None:intergenic 35.0%
ATTAAGCTGTTAGTCCAAAC+TGG - Chr7:6021079-6021098 MsG0780036288.01.T01:intron 35.0%
ATTACTTGAGGAATCTGCAT+TGG - Chr7:6019267-6019286 MsG0780036288.01.T01:intron 35.0%
ATTATGAGTACTATGCTGCT+AGG - Chr7:6016908-6016927 MsG0780036288.01.T01:intron 35.0%
CAAAGACAACAACAATAAGG+TGG + Chr7:6017640-6017659 None:intergenic 35.0%
CCAAACGGATACTAGTATAT+CGG + Chr7:6020880-6020899 None:intergenic 35.0%
CTAGGAAGGTTATTGATCTA+AGG - Chr7:6016843-6016862 MsG0780036288.01.T01:CDS 35.0%
GAAAAACAAAGGATAACCAG+GGG + Chr7:6018560-6018579 None:intergenic 35.0%
GAAAATAACAAGACCCTACT+AGG + Chr7:6018971-6018990 None:intergenic 35.0%
GAAGACAGTGTTAGATTAAC+TGG + Chr7:6017350-6017369 None:intergenic 35.0%
GCAGAAAAAATCCAAATGCA+TGG - Chr7:6017300-6017319 MsG0780036288.01.T01:intron 35.0%
GCTAATCTCAGCAATATCAA+TGG + Chr7:6016570-6016589 None:intergenic 35.0%
GGACAAGTAAGCAAATTTCA+AGG - Chr7:6019704-6019723 MsG0780036288.01.T01:intron 35.0%
GTTGTTTGATTGCATGATTG+AGG - Chr7:6020032-6020051 MsG0780036288.01.T01:intron 35.0%
TAAAAACATCATGACTACCC+TGG + Chr7:6019301-6019320 None:intergenic 35.0%
TAAACTAAACAAAGGTCAGG+AGG + Chr7:6020714-6020733 None:intergenic 35.0%
TAAATCTCATGAGTCAAAGG+TGG - Chr7:6018737-6018756 MsG0780036288.01.T01:intron 35.0%
TAACAAGCATTTAGGAGAGT+TGG - Chr7:6020377-6020396 MsG0780036288.01.T01:intron 35.0%
TATATGGTTTCCATTCTAGC+TGG - Chr7:6020597-6020616 MsG0780036288.01.T01:intron 35.0%
TCAACGATACAACATATCTG+AGG - Chr7:6019038-6019057 MsG0780036288.01.T01:intron 35.0%
TCCAAAAGTGAAATTTCGAG+AGG - Chr7:6018260-6018279 MsG0780036288.01.T01:intron 35.0%
TCCATGTATACAACCTAGTA+GGG - Chr7:6018955-6018974 MsG0780036288.01.T01:CDS 35.0%
TCGGTATATCGGAAAAATGA+AGG - Chr7:6017496-6017515 MsG0780036288.01.T01:intron 35.0%
TCTCAACTAGTTCCTATGTA+CGG - Chr7:6021401-6021420 MsG0780036288.01.T01:intron 35.0%
TCTTTATCAAAGGGATTTGC+AGG - Chr7:6021373-6021392 MsG0780036288.01.T01:intron 35.0%
TGTTGAGGTACAATAATGCT+TGG - Chr7:6018675-6018694 MsG0780036288.01.T01:intron 35.0%
TTAAGCTGTTAGTCCAAACT+GGG - Chr7:6021080-6021099 MsG0780036288.01.T01:intron 35.0%
TTCATAGAACCGAGAAAACT+CGG + Chr7:6018421-6018440 None:intergenic 35.0%
TTCTTCATGTGTCGTGAAAA+TGG - Chr7:6018447-6018466 MsG0780036288.01.T01:intron 35.0%
TTGATGCATGTATACTACGT+AGG - Chr7:6019558-6019577 MsG0780036288.01.T01:CDS 35.0%
TTGCTTACTTGTCCATGAAA+TGG + Chr7:6019698-6019717 None:intergenic 35.0%
! ACCTCTCGAAATTTCACTTT+TGG + Chr7:6018264-6018283 None:intergenic 35.0%
! ATATGGTTTCCATTCTAGCT+GGG - Chr7:6020598-6020617 MsG0780036288.01.T01:intron 35.0%
! ATGAAGTTTAAGGGTGTGTT+TGG - Chr7:6017708-6017727 MsG0780036288.01.T01:intron 35.0%
! ATTTTGTCGAGCATATGTAC+AGG - Chr7:6019383-6019402 MsG0780036288.01.T01:CDS 35.0%
! GAATTTTCATAGTACGATCC+TGG + Chr7:6020752-6020771 None:intergenic 35.0%
! GCCCATGGGTTATATAAAAT+GGG + Chr7:6018932-6018951 None:intergenic 35.0%
! GGAAATTAGTTCTTAATGGG+CGG - Chr7:6018623-6018642 MsG0780036288.01.T01:CDS 35.0%
! GGATTGTTGTTACCATTTCA+TGG - Chr7:6019683-6019702 MsG0780036288.01.T01:intron 35.0%
! GTCCCATTTTATATAACCCA+TGG - Chr7:6018927-6018946 MsG0780036288.01.T01:CDS 35.0%
! GTTGTTTCAATTCAGACAGA+AGG - Chr7:6020225-6020244 MsG0780036288.01.T01:intron 35.0%
! TCTAAAATTCACACGATCGA+CGG + Chr7:6020177-6020196 None:intergenic 35.0%
! TGGAATCTAGAGTTTGTACA+GGG - Chr7:6016454-6016473 MsG0780036288.01.T01:three_prime_UTR 35.0%
!! AAAGTTTTGCTGGTCTAAAG+AGG - Chr7:6021143-6021162 MsG0780036288.01.T01:intron 35.0%
!! CACCGATTTAACAAGCATTT+AGG - Chr7:6020369-6020388 MsG0780036288.01.T01:intron 35.0%
!! CATTTGTTGTTGGTGAAGAA+GGG - Chr7:6016361-6016380 MsG0780036288.01.T01:three_prime_UTR 35.0%
!! CGACAAAAAGCGTTATGTTT+CGG - Chr7:6016642-6016661 MsG0780036288.01.T01:CDS 35.0%
!! TACAAATTGCTTTTGCTAGC+TGG - Chr7:6021611-6021630 MsG0780036288.01.T01:CDS 35.0%
!! TAGTCCTCTAAGATGCTAAA+TGG - Chr7:6019506-6019525 MsG0780036288.01.T01:intron 35.0%
!!! GACTTTTTGGAACTTCTAGA+TGG - Chr7:6019836-6019855 MsG0780036288.01.T01:intron 35.0%
!!! GATTTTTTCTGCCACTATAC+CGG + Chr7:6017292-6017311 None:intergenic 35.0%
!!! GCTGATTTTGGTTTTCATAC+AGG - Chr7:6021115-6021134 MsG0780036288.01.T01:intron 35.0%
AAAGAATCACACATGAGCTC+GGG + Chr7:6018841-6018860 None:intergenic 40.0%
AAATAGGTCGGTCAGTGTAA+CGG - Chr7:6019797-6019816 MsG0780036288.01.T01:intron 40.0%
AAGTCCCAATGTTCAGTTGA+AGG - Chr7:6021349-6021368 MsG0780036288.01.T01:intron 40.0%
AATCTCAAGTCATCAGCATC+TGG + Chr7:6019971-6019990 None:intergenic 40.0%
ACAACATATCTGAGGATACG+TGG - Chr7:6019046-6019065 MsG0780036288.01.T01:intron 40.0%
ACAACCGTTAACGCAACATA+AGG + Chr7:6016680-6016699 None:intergenic 40.0%
ACCAGGAATTGACAGAGATT+CGG + Chr7:6020801-6020820 None:intergenic 40.0%
ACCCTACTAGGTTGTATACA+TGG + Chr7:6018959-6018978 None:intergenic 40.0%
ACTAGTTCCTATGTACGGTT+TGG - Chr7:6021406-6021425 MsG0780036288.01.T01:intron 40.0%
ACTGACACAGTTGTCGAAAT+TGG - Chr7:6016431-6016450 MsG0780036288.01.T01:three_prime_UTR 40.0%
AGAACTTCAATCAACTGACC+AGG + Chr7:6020818-6020837 None:intergenic 40.0%
AGCAGAAATGACAAGAAGAG+AGG + Chr7:6019197-6019216 None:intergenic 40.0%
AGCTACATGGATGCAGAAAT+TGG - Chr7:6019161-6019180 MsG0780036288.01.T01:intron 40.0%
AGTAACCCTAACCCTATATC+AGG + Chr7:6018868-6018887 None:intergenic 40.0%
AGTGCATTTAAACGAGGCTT+TGG - Chr7:6017084-6017103 MsG0780036288.01.T01:intron 40.0%
ATGCAATGCATGACTGAATG+TGG + Chr7:6018112-6018131 None:intergenic 40.0%
ATGTGTCAATCAATGCCATC+AGG + Chr7:6019485-6019504 None:intergenic 40.0%
ATTGTGAGGACAATCCACAA+GGG - Chr7:6021269-6021288 MsG0780036288.01.T01:intron 40.0%
CAAACAGACATGCAGATGAA+GGG + Chr7:6019225-6019244 None:intergenic 40.0%
CAATTCAGACAGAAGGAACA+GGG - Chr7:6020232-6020251 MsG0780036288.01.T01:intron 40.0%
CCAAAATCAGCTACGCATTT+AGG + Chr7:6021106-6021125 None:intergenic 40.0%
CCGATATACTAGTATCCGTT+TGG - Chr7:6020877-6020896 MsG0780036288.01.T01:intron 40.0%
GGAAGCAAGAAAAGACGATA+TGG - Chr7:6021177-6021196 MsG0780036288.01.T01:intron 40.0%
GTACAGGTTAGGTTTCTTTG+TGG - Chr7:6019399-6019418 MsG0780036288.01.T01:intron 40.0%
GTAGTGACCAGTTGAATGAA+AGG + Chr7:6020126-6020145 None:intergenic 40.0%
TCAATTCAGACAGAAGGAAC+AGG - Chr7:6020231-6020250 MsG0780036288.01.T01:intron 40.0%
TCATCAGAGAACAAGTGTCT+AGG + Chr7:6020572-6020591 None:intergenic 40.0%
TCCACCATTTAGCATCTTAG+AGG + Chr7:6019513-6019532 None:intergenic 40.0%
TCTAAAGAGGAAGTTAGCTG+AGG - Chr7:6021156-6021175 MsG0780036288.01.T01:intron 40.0%
TGACTACGAAAAAAACTGCC+AGG + Chr7:6017538-6017557 None:intergenic 40.0%
TGCAACCACTCACTGATATA+AGG - Chr7:6020841-6020860 MsG0780036288.01.T01:intron 40.0%
TGTTGTTGTCTTGTGAGTCA+CGG - Chr7:6016697-6016716 MsG0780036288.01.T01:CDS 40.0%
TTCAACTGAACATTGGGACT+TGG + Chr7:6021350-6021369 None:intergenic 40.0%
TTCCTGTGTTTCTCTTTCCT+AGG - Chr7:6018386-6018405 MsG0780036288.01.T01:intron 40.0%
TTGATTGCATGATTGAGGAG+TGG - Chr7:6020037-6020056 MsG0780036288.01.T01:intron 40.0%
! ACAACGAGGTGCCAAAAATT+AGG + Chr7:6020650-6020669 None:intergenic 40.0%
! ACAGGAAGTACATAAGTGAG+AGG + Chr7:6018373-6018392 None:intergenic 40.0%
! ACAGGACAGTGATTTTCAGA+AGG - Chr7:6016389-6016408 MsG0780036288.01.T01:three_prime_UTR 40.0%
! ACAGGACTGAAAAGTTTTGC+TGG - Chr7:6021133-6021152 MsG0780036288.01.T01:intron 40.0%
! AGAACTCAAGATGCCTTGTT+TGG + Chr7:6019425-6019444 None:intergenic 40.0%
! AGTTTAAGGGTGTGTTTGGA+TGG - Chr7:6017712-6017731 MsG0780036288.01.T01:intron 40.0%
! CAACCTTTTCCGAGTTTTCT+CGG - Chr7:6018409-6018428 MsG0780036288.01.T01:intron 40.0%
! CAGTGATTTTCAGAAGGCTA+AGG - Chr7:6016395-6016414 MsG0780036288.01.T01:three_prime_UTR 40.0%
! GGCCCATGGGTTATATAAAA+TGG + Chr7:6018933-6018952 None:intergenic 40.0%
! GTGAACATTTAGGGTGTGTT+TGG + Chr7:6017945-6017964 None:intergenic 40.0%
! GTGATCTAGAACGCAACATA+AGG + Chr7:6016749-6016768 None:intergenic 40.0%
! GTGGAATCTAGAGTTTGTAC+AGG - Chr7:6016453-6016472 MsG0780036288.01.T01:three_prime_UTR 40.0%
! TAGTGGACCTTTCATTCAAC+TGG - Chr7:6020116-6020135 MsG0780036288.01.T01:intron 40.0%
! TATGGTTTCCATTCTAGCTG+GGG - Chr7:6020599-6020618 MsG0780036288.01.T01:intron 40.0%
! TCAGAAGGCTAAGGTATCAA+GGG - Chr7:6016404-6016423 MsG0780036288.01.T01:three_prime_UTR 40.0%
! TCTAGAATTTGGCATGCTAG+TGG - Chr7:6019882-6019901 MsG0780036288.01.T01:intron 40.0%
! TGGTTTTTGATAGAGCCTGA+TGG - Chr7:6019467-6019486 MsG0780036288.01.T01:intron 40.0%
! TTCAGAAGGCTAAGGTATCA+AGG - Chr7:6016403-6016422 MsG0780036288.01.T01:three_prime_UTR 40.0%
!! ACTAATCTATGAGAGTGCTC+TGG + Chr7:6020263-6020282 None:intergenic 40.0%
!! CCTAAATGCGTAGCTGATTT+TGG - Chr7:6021103-6021122 MsG0780036288.01.T01:intron 40.0%
!! CTAATCTATGAGAGTGCTCT+GGG + Chr7:6020262-6020281 None:intergenic 40.0%
!! GCATTTGTTGTTGGTGAAGA+AGG - Chr7:6016360-6016379 MsG0780036288.01.T01:three_prime_UTR 40.0%
!! TCAGGACATGCATTTGTTGT+TGG - Chr7:6016351-6016370 MsG0780036288.01.T01:three_prime_UTR 40.0%
!! TCCTCTAAGATGCTAAATGG+TGG - Chr7:6019509-6019528 MsG0780036288.01.T01:intron 40.0%
!! TGCGTTCTAGATCACAGTTT+TGG - Chr7:6016754-6016773 MsG0780036288.01.T01:CDS 40.0%
!! TGTGTTTGGTTTGAGGGTTT+GGG + Chr7:6017931-6017950 None:intergenic 40.0%
!! TTAGGGTGTGTTTGGTTTGA+GGG + Chr7:6017937-6017956 None:intergenic 40.0%
!! TTTAGGGTGTGTTTGGTTTG+AGG + Chr7:6017938-6017957 None:intergenic 40.0%
AAACTCGGAAAAGGTTGCCT+AGG + Chr7:6018406-6018425 None:intergenic 45.0%
AACTGTCGATGCTCATGTCA+CGG - Chr7:6018052-6018071 MsG0780036288.01.T01:intron 45.0%
ACCACAGTTACAGTGGATGT+TGG + Chr7:6020774-6020793 None:intergenic 45.0%
ACCTCAACAAAGTCACACCA+TGG + Chr7:6018664-6018683 None:intergenic 45.0%
CAGCTGATACACCACAATTG+CGG - Chr7:6016599-6016618 MsG0780036288.01.T01:CDS 45.0%
CCAAACAGACATGCAGATGA+AGG + Chr7:6019226-6019245 None:intergenic 45.0%
CCAGGAATTGACAGAGATTC+GGG + Chr7:6020800-6020819 None:intergenic 45.0%
CCTTCATCTGCATGTCTGTT+TGG - Chr7:6019223-6019242 MsG0780036288.01.T01:intron 45.0%
CTAGATGCCTATGATCCTGA+AGG - Chr7:6019108-6019127 MsG0780036288.01.T01:intron 45.0%
CTCTCTACCAAACCGTACAT+AGG + Chr7:6021416-6021435 None:intergenic 45.0%
CTGTCTACAAGCACATAAGC+AGG - Chr7:6018155-6018174 MsG0780036288.01.T01:intron 45.0%
GAACCGAGAAAACTCGGAAA+AGG + Chr7:6018415-6018434 None:intergenic 45.0%
GAAGTAGAATGCATAACCCC+TGG - Chr7:6018541-6018560 MsG0780036288.01.T01:intron 45.0%
GAATGCAGCAGAGGAATGTA+TGG - Chr7:6021291-6021310 MsG0780036288.01.T01:intron 45.0%
GACACAGTTGTCGAAATTGG+TGG - Chr7:6016434-6016453 MsG0780036288.01.T01:three_prime_UTR 45.0%
GATTCAACCTGTGTCATGAC+CGG - Chr7:6017270-6017289 MsG0780036288.01.T01:intron 45.0%
GATTGTGAGGACAATCCACA+AGG - Chr7:6021268-6021287 MsG0780036288.01.T01:intron 45.0%
GGTTTCTTTGTGGCCAAACA+AGG - Chr7:6019409-6019428 MsG0780036288.01.T01:intron 45.0%
GTCGAGCATATGTACAGGTT+AGG - Chr7:6019388-6019407 MsG0780036288.01.T01:CDS 45.0%
GTGTTAGATTAACTGGGGAC+TGG + Chr7:6017343-6017362 None:intergenic 45.0%
TCCAACATCCACTGTAACTG+TGG - Chr7:6020770-6020789 MsG0780036288.01.T01:intron 45.0%
TGCCTAGGAAAGAGAAACAC+AGG + Chr7:6018391-6018410 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - Chr7:6017722-6017741 MsG0780036288.01.T01:intron 45.0%
TTATTGTTCTGCAGGCAACC+AGG - Chr7:6020731-6020750 MsG0780036288.01.T01:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - Chr7:6017726-6017745 MsG0780036288.01.T01:intron 45.0%
! TAAGCAAGGCACTAACTGCT+TGG - Chr7:6018602-6018621 MsG0780036288.01.T01:intron 45.0%
! TAAGGGTGTGTTTGGATGGA+GGG - Chr7:6017716-6017735 MsG0780036288.01.T01:intron 45.0%
! TGGTGAAGAAGGGTATAGAC+AGG - Chr7:6016371-6016390 MsG0780036288.01.T01:three_prime_UTR 45.0%
! TTAAGGGTGTGTTTGGATGG+AGG - Chr7:6017715-6017734 MsG0780036288.01.T01:intron 45.0%
! TTTTTGTGCATGCAGGTGCT+TGG - Chr7:6019344-6019363 MsG0780036288.01.T01:CDS 45.0%
!! ATGTACGGTTTGGTAGAGAG+AGG - Chr7:6021416-6021435 MsG0780036288.01.T01:intron 45.0%
!! GAGTCACGGTCTTGTTGTTT+CGG - Chr7:6016711-6016730 MsG0780036288.01.T01:CDS 45.0%
!! GTATACATGGATTGGCCCAT+GGG + Chr7:6018946-6018965 None:intergenic 45.0%
!! GTGTGTTTGGTTTGAGGGTT+TGG + Chr7:6017932-6017951 None:intergenic 45.0%
!! GTGTTTGGTTTGAGGGTTTG+GGG + Chr7:6017930-6017949 None:intergenic 45.0%
!! TAAACGAGGCTTTGGATGTG+TGG - Chr7:6017092-6017111 MsG0780036288.01.T01:intron 45.0%
!! TGTATACATGGATTGGCCCA+TGG + Chr7:6018947-6018966 None:intergenic 45.0%
!! TGTTTGGTTTGAGGGTTTGG+GGG + Chr7:6017929-6017948 None:intergenic 45.0%
!!! TATATTTCATTTTTAAATTA+CGG - Chr7:6017766-6017785 MsG0780036288.01.T01:intron 5.0%
ACGATCGACGGAATTCAGGA+AGG + Chr7:6020165-6020184 None:intergenic 50.0%
AGACATGCAGATGAAGGGTG+AGG + Chr7:6019220-6019239 None:intergenic 50.0%
ATCAGGTCCAGCCATGCATT+TGG + Chr7:6017314-6017333 None:intergenic 50.0%
ATCTGAGGATACGTGGCAAC+AGG - Chr7:6019053-6019072 MsG0780036288.01.T01:intron 50.0%
ATGCATGGCTGGACCTGATA+TGG - Chr7:6017315-6017334 MsG0780036288.01.T01:intron 50.0%
CACTATACCGGTCATGACAC+AGG + Chr7:6017280-6017299 None:intergenic 50.0%
CCCGAATCTCTGTCAATTCC+TGG - Chr7:6020797-6020816 MsG0780036288.01.T01:intron 50.0%
CTACGCATTTAGGCCCAGTT+TGG + Chr7:6021096-6021115 None:intergenic 50.0%
CTGCATTGGAAGCAACACCA+GGG - Chr7:6019281-6019300 MsG0780036288.01.T01:intron 50.0%
CTGTGTCATGACCGGTATAG+TGG - Chr7:6017278-6017297 MsG0780036288.01.T01:intron 50.0%
GCCATGGTGTGACTTTGTTG+AGG - Chr7:6018660-6018679 MsG0780036288.01.T01:intron 50.0%
GGGACTTGGATGAACACACA+GGG + Chr7:6021336-6021355 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - Chr7:6017725-6017744 MsG0780036288.01.T01:intron 50.0%
TCACACGATCGACGGAATTC+AGG + Chr7:6020169-6020188 None:intergenic 50.0%
TCACAGCAAGACCGCAATTG+TGG + Chr7:6016613-6016632 None:intergenic 50.0%
TCTGCATTGGAAGCAACACC+AGG - Chr7:6019280-6019299 MsG0780036288.01.T01:intron 50.0%
TGCATGGCTGGACCTGATAT+GGG - Chr7:6017316-6017335 MsG0780036288.01.T01:intron 50.0%
TGGGACTTGGATGAACACAC+AGG + Chr7:6021337-6021356 None:intergenic 50.0%
TTGCAAGACCCCAGCTAGAA+TGG + Chr7:6020610-6020629 None:intergenic 50.0%
TTGGATGGAGGGTTTAGGAG+GGG - Chr7:6017727-6017746 MsG0780036288.01.T01:intron 50.0%
! GAAGGCTAAGGTATCAAGGG+AGG - Chr7:6016407-6016426 MsG0780036288.01.T01:three_prime_UTR 50.0%
!! GTTTGGTTTGAGGGTTTGGG+GGG + Chr7:6017928-6017947 None:intergenic 50.0%
!! TTTGGTTTGAGGGTTTGGGG+GGG + Chr7:6017927-6017946 None:intergenic 50.0%
ATGGAGGGTTTAGGAGGGGA+AGG - Chr7:6017731-6017750 MsG0780036288.01.T01:intron 55.0%
CATGTCACGGCTGGGTTTGA+TGG - Chr7:6018065-6018084 MsG0780036288.01.T01:intron 55.0%
CGGGATCACCACAGTTACAG+TGG + Chr7:6020781-6020800 None:intergenic 55.0%
GGCATGCTTGAGCTGAATCC+TGG - Chr7:6017517-6017536 MsG0780036288.01.T01:intron 55.0%
GGTTTCCACTGCTTCAGCCA+TGG - Chr7:6018644-6018663 MsG0780036288.01.T01:intron 55.0%
TAGGTCGGTCAGTGTAACGG+TGG - Chr7:6019800-6019819 MsG0780036288.01.T01:intron 55.0%
TCACACCATGGCTGAAGCAG+TGG + Chr7:6018652-6018671 None:intergenic 55.0%
TCCACAAGGGAATGCAGCAG+AGG - Chr7:6021282-6021301 MsG0780036288.01.T01:intron 55.0%
TCCTCTGCTGCATTCCCTTG+TGG + Chr7:6021286-6021305 None:intergenic 55.0%
TCGATGCTCATGTCACGGCT+GGG - Chr7:6018057-6018076 MsG0780036288.01.T01:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG - Chr7:6017732-6017751 MsG0780036288.01.T01:intron 55.0%
! TTGGTTTGAGGGTTTGGGGG+GGG + Chr7:6017926-6017945 None:intergenic 55.0%
!! CGGTTTGGTAGAGAGAGGAG+AGG - Chr7:6021421-6021440 MsG0780036288.01.T01:intron 55.0%
AGGGTTTAGGAGGGGAAGGG+AGG - Chr7:6017735-6017754 MsG0780036288.01.T01:intron 60.0%
CTGGGGACTGGACCCATATC+AGG + Chr7:6017331-6017350 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - Chr7:6017736-6017755 MsG0780036288.01.T01:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - Chr7:6017737-6017756 MsG0780036288.01.T01:intron 60.0%
GTCGATGCTCATGTCACGGC+TGG - Chr7:6018056-6018075 MsG0780036288.01.T01:intron 60.0%
TGGTTTGAGGGTTTGGGGGG+GGG + Chr7:6017925-6017944 None:intergenic 60.0%
GGTTTGAGGGTTTGGGGGGG+GGG + Chr7:6017924-6017943 None:intergenic 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - Chr7:6017741-6017760 MsG0780036288.01.T01:intron 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - Chr7:6017740-6017759 MsG0780036288.01.T01:intron 65.0%
TGAGGGTTTGGGGGGGGGGA+GGG + Chr7:6017920-6017939 None:intergenic 70.0%
TTGAGGGTTTGGGGGGGGGG+AGG + Chr7:6017921-6017940 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 6016300 6021710 6016300 ID=MsG0780036288.01;Name=MsG0780036288.01
Chr7 mRNA 6016300 6021710 6016300 ID=MsG0780036288.01.T01;Parent=MsG0780036288.01;Name=MsG0780036288.01.T01;_AED=0.41;_eAED=0.43;_QI=0|1|0.87|1|1|1|8|257|306
Chr7 exon 6016300 6016873 6016300 ID=MsG0780036288.01.T01:exon:3250;Parent=MsG0780036288.01.T01
Chr7 exon 6017192 6017265 6017192 ID=MsG0780036288.01.T01:exon:3249;Parent=MsG0780036288.01.T01
Chr7 exon 6018606 6018651 6018606 ID=MsG0780036288.01.T01:exon:3248;Parent=MsG0780036288.01.T01
Chr7 exon 6018881 6018977 6018881 ID=MsG0780036288.01.T01:exon:3247;Parent=MsG0780036288.01.T01
Chr7 exon 6019329 6019411 6019329 ID=MsG0780036288.01.T01:exon:3246;Parent=MsG0780036288.01.T01
Chr7 exon 6019527 6019602 6019527 ID=MsG0780036288.01.T01:exon:3245;Parent=MsG0780036288.01.T01
Chr7 exon 6019924 6019975 6019924 ID=MsG0780036288.01.T01:exon:3244;Parent=MsG0780036288.01.T01
Chr7 exon 6021535 6021710 6021535 ID=MsG0780036288.01.T01:exon:3243;Parent=MsG0780036288.01.T01
Chr7 CDS 6021535 6021710 6021535 ID=MsG0780036288.01.T01:cds;Parent=MsG0780036288.01.T01
Chr7 CDS 6019924 6019975 6019924 ID=MsG0780036288.01.T01:cds;Parent=MsG0780036288.01.T01
Chr7 CDS 6019527 6019602 6019527 ID=MsG0780036288.01.T01:cds;Parent=MsG0780036288.01.T01
Chr7 CDS 6019329 6019411 6019329 ID=MsG0780036288.01.T01:cds;Parent=MsG0780036288.01.T01
Chr7 CDS 6018881 6018977 6018881 ID=MsG0780036288.01.T01:cds;Parent=MsG0780036288.01.T01
Chr7 CDS 6018606 6018651 6018606 ID=MsG0780036288.01.T01:cds;Parent=MsG0780036288.01.T01
Chr7 CDS 6017192 6017265 6017192 ID=MsG0780036288.01.T01:cds;Parent=MsG0780036288.01.T01
Chr7 CDS 6016557 6016873 6016557 ID=MsG0780036288.01.T01:cds;Parent=MsG0780036288.01.T01
Chr7 three_prime_UTR 6016300 6016556 6016300 ID=MsG0780036288.01.T01:three_prime_utr;Parent=MsG0780036288.01.T01
Gene Sequence

>MsG0780036288.01.T01

ATGAATGTATTTATTGTTTATTATATTGAGTTTGTTTGTGCAGATATAAAATCAGGACATGCATTTGTTGTTGGTGAAGAAGGGTATAGACAGGACAGTGATTTTCAGAAGGCTAAGGTATCAAGGGAGGCACTGACACAGTTGTCGAAATTGGTGGAATCTAGAGTTTGTACAGGGGCAACAATTTTTGATGAACTGTCGATGCTCATGTCACGGCTGGGTTTGATGGCAACCTTTTCCGAGTTTTCTCGGTTCTATGAATTTGTTTTCTTCATGTGTCGTGAAAATGGTCAAAAGAACATCACGGTAAGCAAGGCACTAACTGCTTGGAAATTAGTTCTTAATGGGCGGTTTCCACTGCTTCAGCCATGGTGTGACTTTGTTGAGAAAAATCAACGATACAACATATCTGAGGATACGTGGCAACAGGTTCTGTCTTTCAGCATATGTACTCGTGATAGTCTAGATGCCTATGATCCTGAAGGTGCTTGGCCTGTTTTAATAGATGATTTTGTCGAGCATATGTACAGGCAACCAGGATCGTACTATGAAAATTCCAACATCCACTGTAACTGTGGTGATCCCGAATCTCTGTCAATTCCTGGACTGAAAAGTTTTGCTGGTCTAAAGAGGAAGTTAGCTGAGGAAGCAAGAAAAGACGATATGGAGTACTCTTATTCATCTGAAGAGATGAATTCCTCAAACTGTAAAAAAAGTAGAGCTTATGGTTTAGTAGATTGTGAGGACAATCCACAAGGGAATGCAGCAGAGGAATGTATGGAAACTAGTAGACATAATAGCCCTGTGTGTTCATCCAAGTCCCAATGTTCAGTTGAAGGTTCTTTATCAAAGGGATTTGCAGGACTACTCTCAACTAGTTCCTATGTACGGTTTGGTAGAGAGAGGAGAGGCTTCATTTAG

Protein sequence

>MsG0780036288.01.T01

MNVFIVYYIEFVCADIKSGHAFVVGEEGYRQDSDFQKAKVSREALTQLSKLVESRVCTGATIFDELSMLMSRLGLMATFSEFSRFYEFVFFMCRENGQKNITVSKALTAWKLVLNGRFPLLQPWCDFVEKNQRYNISEDTWQQVLSFSICTRDSLDAYDPEGAWPVLIDDFVEHMYRQPGSYYENSNIHCNCGDPESLSIPGLKSFAGLKRKLAEEARKDDMEYSYSSEEMNSSNCKKSRAYGLVDCEDNPQGNAAEECMETSRHNSPVCSSKSQCSVEGSLSKGFAGLLSTSSYVRFGRERRGFI*