AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037963.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037963.01.T01 MTR_0388s0020 90.840 131 12 0 1 131 20 150 3.83e-88 253
MsG0780037963.01.T01 MTR_4g025830 52.941 136 51 3 4 128 18 151 4.18e-42 137
MsG0780037963.01.T01 MTR_7g118010 60.294 68 26 1 55 122 22 88 3.01e-24 89.7
MsG0780037963.01.T01 MTR_3g092220 50.000 74 36 1 55 128 32 104 9.36e-21 81.3
MsG0780037963.01.T01 MTR_8g026730 55.882 68 29 1 55 122 26 92 2.12e-20 80.1
MsG0780037963.01.T01 MTR_3g084250 49.398 83 37 3 42 122 10 89 1.81e-19 77.4
MsG0780037963.01.T01 MTR_4g072240 44.706 85 42 3 38 120 7 88 2.61e-18 74.3
MsG0780037963.01.T01 MTR_4g072500 42.045 88 46 3 37 122 5 89 3.99e-18 73.9
MsG0780037963.01.T01 MTR_4g072300 44.706 85 42 3 38 120 7 88 6.69e-18 73.2
MsG0780037963.01.T01 MTR_4g072530 40.909 88 47 3 37 122 5 89 1.05e-17 72.8
MsG0780037963.01.T01 MTR_4g072570 45.783 83 40 3 42 122 10 89 2.14e-17 72.0
MsG0780037963.01.T01 MTR_4g072220 40.909 88 47 3 38 123 7 91 2.61e-17 72.0
MsG0780037963.01.T01 MTR_4g072870 40.698 86 46 3 39 122 8 90 6.65e-17 70.9
MsG0780037963.01.T01 MTR_4g072980 40.217 92 47 4 32 122 8 92 8.30e-17 70.5
MsG0780037963.01.T01 MTR_4g072640 38.636 88 49 3 37 122 5 89 9.34e-17 70.5
MsG0780037963.01.T01 MTR_4g072600 43.590 78 40 2 47 123 11 85 4.54e-16 68.6
MsG0780037963.01.T01 MTR_3g117640 44.595 74 38 2 55 127 33 104 6.48e-16 68.6
MsG0780037963.01.T01 MTR_4g072190 37.755 98 55 3 27 122 6 99 7.28e-16 68.2
MsG0780037963.01.T01 MTR_4g072860 40.698 86 46 3 39 122 8 90 7.56e-16 68.2
MsG0780037963.01.T01 MTR_8g076040 48.649 74 34 2 49 122 35 104 2.32e-15 67.0
MsG0780037963.01.T01 MTR_3g084210 50.000 60 26 2 53 111 22 78 3.21e-15 66.6
MsG0780037963.01.T01 MTR_4g072330 44.595 74 37 2 50 122 17 87 3.58e-15 66.2
MsG0780037963.01.T01 MTR_3g084230 50.000 60 26 2 53 111 22 78 3.85e-15 66.2
MsG0780037963.01.T01 MTR_4g072850 46.269 67 32 2 55 120 26 89 4.05e-15 66.2
MsG0780037963.01.T01 MTR_3g117630 46.479 71 33 3 42 110 10 77 4.07e-15 66.2
MsG0780037963.01.T01 MTR_3g110038 41.250 80 43 2 42 120 11 87 5.05e-15 65.9
MsG0780037963.01.T01 MTR_3g084160 51.667 60 25 2 53 111 22 78 5.33e-15 65.9
MsG0780037963.01.T01 MTR_4g072910 52.632 57 23 2 55 110 34 87 5.37e-15 66.2
MsG0780037963.01.T01 MTR_4g072880 40.476 84 45 3 39 120 8 88 7.63e-15 65.5
MsG0780037963.01.T01 MTR_4g072230 39.286 84 44 3 39 120 8 86 8.09e-15 65.5
MsG0780037963.01.T01 MTR_8g461420 50.000 60 26 2 53 111 22 78 8.47e-15 65.5
MsG0780037963.01.T01 MTR_4g072890 42.500 80 41 3 38 115 7 83 8.54e-15 65.5
MsG0780037963.01.T01 MTR_4g072270 40.476 84 45 3 39 120 8 88 1.04e-14 65.1
MsG0780037963.01.T01 MTR_3g084190 51.667 60 25 2 53 111 22 78 1.07e-14 65.1
MsG0780037963.01.T01 MTR_3g117610 42.029 69 37 1 54 122 43 108 1.08e-14 65.5
MsG0780037963.01.T01 MTR_4g072480 43.373 83 42 3 42 122 10 89 1.10e-14 65.1
MsG0780037963.01.T01 MTR_4g072310 37.209 86 49 3 39 122 8 90 1.14e-14 65.1
MsG0780037963.01.T01 MTR_3g113310 42.857 70 37 1 53 122 39 105 1.15e-14 65.5
MsG0780037963.01.T01 MTR_3g084240 40.000 80 44 2 42 120 11 87 1.16e-14 65.1
MsG0780037963.01.T01 MTR_3g084170 40.000 80 44 2 42 120 11 87 1.60e-14 64.7
MsG0780037963.01.T01 MTR_4g072260 37.079 89 51 3 38 124 7 92 1.61e-14 64.7
MsG0780037963.01.T01 MTR_3g084220 44.286 70 35 2 42 110 11 77 1.67e-14 64.7
MsG0780037963.01.T01 MTR_4g072560 51.724 58 25 2 55 111 31 86 1.77e-14 64.7
MsG0780037963.01.T01 MTR_5g021820 43.210 81 41 3 42 122 28 103 1.96e-14 64.7
MsG0780037963.01.T01 MTR_4g072620 40.000 85 47 2 39 122 8 89 2.44e-14 64.3
MsG0780037963.01.T01 MTR_3g084150 45.070 71 34 3 42 110 10 77 2.96e-14 63.9
MsG0780037963.01.T01 MTR_3g084180 45.070 71 34 3 42 110 10 77 3.48e-14 63.9
MsG0780037963.01.T01 MTR_4g072370 43.243 74 38 2 50 122 17 87 3.98e-14 63.5
MsG0780037963.01.T01 MTR_3g110045 50.877 57 24 2 56 111 84 137 6.27e-14 64.7
MsG0780037963.01.T01 MTR_4g072250 42.647 68 34 2 56 122 26 89 6.79e-14 63.2
MsG0780037963.01.T01 MTR_4g072820 42.647 68 35 2 56 122 20 84 7.83e-14 62.8
MsG0780037963.01.T01 MTR_4g072730 43.836 73 37 2 51 122 20 89 8.07e-14 62.8
MsG0780037963.01.T01 MTR_4g072550 39.175 97 54 3 23 118 4 96 8.80e-14 63.2
MsG0780037963.01.T01 MTR_8g461410 43.662 71 35 3 42 110 10 77 9.39e-14 62.8
MsG0780037963.01.T01 MTR_4g072740 42.857 77 40 2 47 122 11 84 1.06e-13 62.4
MsG0780037963.01.T01 MTR_3g110042 42.169 83 43 3 42 122 10 89 1.64e-13 62.0
MsG0780037963.01.T01 MTR_4g072660 45.070 71 35 2 51 120 15 82 1.76e-13 62.0
MsG0780037963.01.T01 MTR_4g072590 49.231 65 26 3 55 115 19 80 1.77e-13 61.6
MsG0780037963.01.T01 MTR_4g072680 45.570 79 38 3 42 118 10 85 1.95e-13 62.0
MsG0780037963.01.T01 MTR_4g072940 46.154 65 31 2 55 118 56 117 1.98e-13 62.8
MsG0780037963.01.T01 MTR_4g124750 43.662 71 35 2 50 118 61 128 2.14e-13 63.5
MsG0780037963.01.T01 MTR_4g072460 45.570 79 38 3 42 118 10 85 2.32e-13 61.6
MsG0780037963.01.T01 MTR_4g072580 39.744 78 43 2 47 123 11 85 2.46e-13 61.6
MsG0780037963.01.T01 MTR_2g043960 41.096 73 40 1 52 124 72 141 2.63e-13 63.2
MsG0780037963.01.T01 MTR_4g072630 44.776 67 33 2 46 111 11 74 3.47e-13 61.2
MsG0780037963.01.T01 MTR_4g072830 42.667 75 39 2 50 123 17 88 3.74e-13 61.2
MsG0780037963.01.T01 MTR_5g008370 40.000 75 41 2 55 128 24 95 5.42e-13 62.0
MsG0780037963.01.T01 MTR_1g009150 40.541 74 41 1 55 128 70 140 6.29e-13 62.8
MsG0780037963.01.T01 MTR_4g072610 37.647 85 49 2 40 123 3 84 7.70e-13 60.1
MsG0780037963.01.T01 MTR_4g057810 38.750 80 45 2 39 118 24 99 1.05e-12 60.8
MsG0780037963.01.T01 MTR_2g095430 43.860 57 32 0 62 118 52 108 1.23e-12 60.8
MsG0780037963.01.T01 MTR_4g072540 42.029 69 36 2 55 122 20 85 1.45e-12 59.3
MsG0780037963.01.T01 MTR_3g084260 41.250 80 40 3 42 120 15 88 1.51e-12 59.7
MsG0780037963.01.T01 MTR_4g072670 43.478 69 35 2 55 122 20 85 1.52e-12 59.3
MsG0780037963.01.T01 MTR_5g008360 38.961 77 43 2 47 122 7 80 1.54e-12 59.3
MsG0780037963.01.T01 MTR_5g008350 44.737 76 37 3 40 113 3 75 2.22e-12 58.9
MsG0780037963.01.T01 MTR_4g050700 43.662 71 35 3 42 110 11 78 2.88e-12 58.9
MsG0780037963.01.T01 MTR_2g012410 43.662 71 35 3 42 110 11 78 2.88e-12 58.9
MsG0780037963.01.T01 MTR_4g072770 42.857 70 36 2 56 124 15 81 3.17e-12 58.5
MsG0780037963.01.T01 MTR_4g072160 42.857 70 37 1 54 123 35 101 4.05e-12 59.7
MsG0780037963.01.T01 MTR_4g072930 47.541 61 30 2 57 115 42 102 4.54e-12 58.9
MsG0780037963.01.T01 MTR_4g072720 42.029 69 36 2 55 122 20 85 4.69e-12 58.2
MsG0780037963.01.T01 MTR_2g066830 32.558 86 55 1 40 125 42 124 4.78e-12 59.7
MsG0780037963.01.T01 MTR_4g005320 42.857 63 33 1 56 118 70 129 4.82e-12 60.1
MsG0780037963.01.T01 MTR_1g024085 37.500 88 51 2 41 128 23 106 5.06e-12 59.7
MsG0780037963.01.T01 MTR_4g072465 41.791 67 35 2 46 111 11 74 5.06e-12 58.2
MsG0780037963.01.T01 MTR_8g461210 40.909 66 36 1 53 118 32 94 5.07e-12 58.9
MsG0780037963.01.T01 MTR_4g072470 44.615 65 32 2 47 110 11 72 7.51e-12 57.8
MsG0780037963.01.T01 MTR_4g072650 36.471 85 50 2 40 123 3 84 7.53e-12 57.8
MsG0780037963.01.T01 MTR_4g072510 41.429 70 37 2 54 122 19 85 1.14e-11 57.0
MsG0780037963.01.T01 MTR_4g072450 46.552 58 27 2 55 111 19 73 1.34e-11 57.0
MsG0780037963.01.T01 MTR_4g072280 45.312 64 31 2 38 100 7 67 2.17e-11 56.2
MsG0780037963.01.T01 MTR_4g072750 45.902 61 29 2 46 105 16 73 5.02e-11 55.5
MsG0780037963.01.T01 MTR_3g109160 42.188 64 34 1 55 118 68 128 8.08e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037963.01.T01 AT2G45210 48.148 135 63 3 1 128 17 151 5.13e-39 129
MsG0780037963.01.T01 AT3G60690 45.946 111 52 2 24 126 48 158 1.15e-31 110
MsG0780037963.01.T01 AT4G22620 46.226 106 52 2 20 124 46 147 1.27e-25 95.1
MsG0780037963.01.T01 AT4G12410 42.105 114 57 2 20 124 31 144 2.17e-25 94.4
MsG0780037963.01.T01 AT2G46690 45.882 85 46 0 47 131 15 99 6.67e-22 84.3
MsG0780037963.01.T01 AT3G61900 54.412 68 31 0 55 122 29 96 4.02e-21 82.8
MsG0780037963.01.T01 AT4G00880 55.224 67 29 1 56 122 28 93 8.57e-20 79.0
MsG0780037963.01.T01 AT5G53590 45.714 70 36 1 55 122 45 114 1.05e-17 74.3
MsG0780037963.01.T01 AT4G34800 55.738 61 26 1 56 115 21 81 1.90e-17 72.4
MsG0780037963.01.T01 AT4G34810 48.148 81 40 2 33 111 25 105 4.95e-17 72.0
MsG0780037963.01.T01 AT3G03820 49.275 69 34 1 55 122 26 94 7.43e-17 70.9
MsG0780037963.01.T01 AT4G38850 46.753 77 37 2 47 122 15 88 8.49e-17 70.5
MsG0780037963.01.T01 AT2G21210 42.308 78 43 2 50 126 22 98 1.31e-16 70.1
MsG0780037963.01.T01 AT4G34790 55.738 61 25 2 56 115 39 98 3.34e-16 69.3
MsG0780037963.01.T01 AT2G21210 41.772 79 44 2 49 126 88 165 5.01e-16 70.5
MsG0780037963.01.T01 AT4G34770 46.250 80 40 3 48 126 27 104 5.90e-16 68.9
MsG0780037963.01.T01 AT2G21220 38.095 105 55 3 26 123 3 104 8.80e-16 68.2
MsG0780037963.01.T01 AT3G43120 37.500 96 56 2 37 131 59 151 3.04e-15 68.2
MsG0780037963.01.T01 AT3G03850 47.761 67 33 2 57 122 26 91 4.92e-15 66.2
MsG0780037963.01.T01 AT4G34760 36.697 109 57 3 23 122 1 106 9.51e-15 65.9
MsG0780037963.01.T01 AT2G21200 47.692 65 31 2 47 110 12 74 1.02e-14 65.1
MsG0780037963.01.T01 AT4G38840 52.632 57 24 2 55 110 32 86 1.28e-14 65.1
MsG0780037963.01.T01 AT4G34780 50.877 57 27 1 55 110 27 83 1.87e-14 65.1
MsG0780037963.01.T01 AT1G75580 36.364 110 52 4 26 122 3 107 2.03e-14 65.1
MsG0780037963.01.T01 AT3G20220 44.444 63 33 1 56 118 47 107 3.02e-14 64.7
MsG0780037963.01.T01 AT3G12830 35.398 113 70 1 13 125 7 116 4.53e-14 64.7
MsG0780037963.01.T01 AT4G38825 44.928 69 35 2 55 122 22 88 4.53e-14 63.5
MsG0780037963.01.T01 AT5G20810 45.312 64 32 1 52 115 75 135 4.88e-14 65.5
MsG0780037963.01.T01 AT5G18020 49.123 57 26 2 55 110 23 77 8.43e-14 62.8
MsG0780037963.01.T01 AT5G20810 44.615 65 33 1 52 116 75 136 9.10e-14 65.1
MsG0780037963.01.T01 AT5G18080 50.877 57 25 2 55 110 23 77 9.16e-14 62.8
MsG0780037963.01.T01 AT4G13790 50.877 57 26 2 55 110 24 79 1.02e-13 62.8
MsG0780037963.01.T01 AT3G03840 44.928 69 36 2 55 122 26 93 1.78e-13 62.0
MsG0780037963.01.T01 AT5G18060 44.737 76 33 4 36 110 10 77 2.24e-13 61.6
MsG0780037963.01.T01 AT5G18050 40.580 69 38 2 55 122 23 89 3.60e-13 61.2
MsG0780037963.01.T01 AT3G03830 45.588 68 36 1 56 122 24 91 4.84e-13 60.8
MsG0780037963.01.T01 AT4G38860 38.095 105 54 4 26 122 3 104 4.95e-13 61.2
MsG0780037963.01.T01 AT5G18030 40.789 76 34 3 36 110 10 75 5.10e-13 60.8
MsG0780037963.01.T01 AT1G56150 41.096 73 40 1 56 128 38 107 2.17e-12 59.7
MsG0780037963.01.T01 AT2G18010 41.892 74 39 2 37 110 30 99 4.51e-12 58.9
MsG0780037963.01.T01 AT1G19830 42.466 73 35 2 50 120 42 109 5.61e-12 58.9
MsG0780037963.01.T01 AT5G10990 36.047 86 52 1 41 126 26 108 6.05e-12 59.3
MsG0780037963.01.T01 AT5G66260 46.429 56 27 1 55 110 33 85 6.08e-12 58.2
MsG0780037963.01.T01 AT4G36110 49.091 55 25 1 56 110 40 91 1.05e-11 57.8
MsG0780037963.01.T01 AT2G28085 40.678 59 35 0 62 120 62 120 3.62e-11 57.0
MsG0780037963.01.T01 AT1G75590 41.892 74 37 2 43 116 32 99 4.66e-11 57.4

Find 39 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAGAGGAAGAGATAAAT+AGG 0.176068 7:+37145659 MsG0780037963.01.T01:CDS
CCTTCGGCACGCTGAATTTC+GGG 0.191900 7:-37145612 None:intergenic
CCCTTCGGCACGCTGAATTT+CGG 0.222131 7:-37145613 None:intergenic
AAAGATGTTGAAGAGGAGTA+TGG 0.344907 7:+37145733 MsG0780037963.01.T01:CDS
TTGCATCAGGTTCCAGCAAT+TGG 0.352794 7:+37145824 MsG0780037963.01.T01:CDS
TACGATACCATGTAGGTTTA+CGG 0.360176 7:+37145777 MsG0780037963.01.T01:CDS
CGGCAATGAAACTTCTCAAA+TGG 0.360235 7:+37145521 MsG0780037963.01.T01:CDS
CGACCTGTTGAAAAGCTTCA+TGG 0.364741 7:-37145566 None:intergenic
CATTTGAGAAGTTTCATTGC+CGG 0.377274 7:-37145520 None:intergenic
GGAAGAGATAAATAGGGTTA+TGG 0.394223 7:+37145666 MsG0780037963.01.T01:CDS
GAAAGAGGAAGAGATAAATA+GGG 0.396870 7:+37145660 MsG0780037963.01.T01:CDS
GGCAATGAAACTTCTCAAAT+GGG 0.401699 7:+37145522 MsG0780037963.01.T01:CDS
AATAAGACGCGGATTCGAAC+TGG 0.406236 7:+37145466 MsG0780037963.01.T01:CDS
TACACAACCATTTGTCCCTT+CGG 0.440608 7:-37145628 None:intergenic
GCTGGAACCTGATGCAATCC+AGG 0.450641 7:-37145818 None:intergenic
TAAGCAATTCACTAAACAAT+GGG 0.459340 7:-37145711 None:intergenic
ATCAAGACCTGGATTGCATC+AGG 0.485980 7:+37145811 MsG0780037963.01.T01:CDS
CCCGAAATTCAGCGTGCCGA+AGG 0.490065 7:+37145612 MsG0780037963.01.T01:CDS
GTATCGTAATCCCACCTTGA+TGG 0.497196 7:-37145762 None:intergenic
CAGCGTGCCGAAGGGACAAA+TGG 0.509825 7:+37145621 MsG0780037963.01.T01:CDS
CGGCACGCTGAATTTCGGGC+TGG 0.511195 7:-37145608 None:intergenic
TGATTGTCATGCTCAATCTC+CGG 0.516355 7:+37145501 MsG0780037963.01.T01:CDS
GGGACAAATGGTTGTGTATG+TGG 0.525067 7:+37145633 MsG0780037963.01.T01:CDS
TGTGTATGTGGGACAGAAAG+AGG 0.554416 7:+37145645 MsG0780037963.01.T01:CDS
TTAAGCAATTCACTAAACAA+TGG 0.555508 7:-37145712 None:intergenic
ATTGCTTAAAGATGTTGAAG+AGG 0.557241 7:+37145726 MsG0780037963.01.T01:CDS
GGGTGGTTAAAGTATATCAC+TGG 0.571494 7:-37145691 None:intergenic
AGTTTGAACGGATCAAGACC+TGG 0.576336 7:+37145800 MsG0780037963.01.T01:CDS
GTAGGTTTACGGAGTTTGAA+CGG 0.580984 7:+37145788 MsG0780037963.01.T01:CDS
CCGAAATTCAGCGTGCCGAA+GGG 0.592901 7:+37145613 MsG0780037963.01.T01:CDS
TCAAACTCCGTAAACCTACA+TGG 0.593678 7:-37145784 None:intergenic
TCAACAGGTCGAGTTATACT+CGG 0.595591 7:+37145578 MsG0780037963.01.T01:CDS
GCAATTCACTAAACAATGGG+TGG 0.601342 7:-37145708 None:intergenic
TGGCATCCGTCGTTAGCTTG+CGG 0.604086 7:-37145546 None:intergenic
GTGGGATTACGATACCATGT+AGG 0.627453 7:+37145770 MsG0780037963.01.T01:CDS
GGACAAATGGTTGTGTATGT+GGG 0.635159 7:+37145634 MsG0780037963.01.T01:CDS
GCAATGAAACTTCTCAAATG+GGG 0.655342 7:+37145523 MsG0780037963.01.T01:CDS
ATGGGGCCGCAAGCTAACGA+CGG 0.684381 7:+37145540 MsG0780037963.01.T01:CDS
GATTGATGTTTAATAAGACG+CGG 0.689607 7:+37145455 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TAAGCAATTCACTAAACAAT+GGG - Chr7:37145714-37145733 None:intergenic 25.0%
! TTAAGCAATTCACTAAACAA+TGG - Chr7:37145715-37145734 None:intergenic 25.0%
AGAAAGAGGAAGAGATAAAT+AGG + Chr7:37145659-37145678 MsG0780037963.01.T01:CDS 30.0%
ATTGCTTAAAGATGTTGAAG+AGG + Chr7:37145726-37145745 MsG0780037963.01.T01:CDS 30.0%
GAAAGAGGAAGAGATAAATA+GGG + Chr7:37145660-37145679 MsG0780037963.01.T01:CDS 30.0%
AAAGATGTTGAAGAGGAGTA+TGG + Chr7:37145733-37145752 MsG0780037963.01.T01:CDS 35.0%
CATTTGAGAAGTTTCATTGC+CGG - Chr7:37145523-37145542 None:intergenic 35.0%
GCAATGAAACTTCTCAAATG+GGG + Chr7:37145523-37145542 MsG0780037963.01.T01:CDS 35.0%
GGAAGAGATAAATAGGGTTA+TGG + Chr7:37145666-37145685 MsG0780037963.01.T01:CDS 35.0%
GGCAATGAAACTTCTCAAAT+GGG + Chr7:37145522-37145541 MsG0780037963.01.T01:CDS 35.0%
TACGATACCATGTAGGTTTA+CGG + Chr7:37145777-37145796 MsG0780037963.01.T01:CDS 35.0%
!!! ATGGTTTTAACCATCAAGGT+GGG + Chr7:37145752-37145771 MsG0780037963.01.T01:CDS 35.0%
!!! GAGTATGGTTTTAACCATCA+AGG + Chr7:37145748-37145767 MsG0780037963.01.T01:CDS 35.0%
!!! TATGGTTTTAACCATCAAGG+TGG + Chr7:37145751-37145770 MsG0780037963.01.T01:CDS 35.0%
CGGCAATGAAACTTCTCAAA+TGG + Chr7:37145521-37145540 MsG0780037963.01.T01:CDS 40.0%
GCAATTCACTAAACAATGGG+TGG - Chr7:37145711-37145730 None:intergenic 40.0%
GGACAAATGGTTGTGTATGT+GGG + Chr7:37145634-37145653 MsG0780037963.01.T01:CDS 40.0%
GGGTGGTTAAAGTATATCAC+TGG - Chr7:37145694-37145713 None:intergenic 40.0%
GTAGGTTTACGGAGTTTGAA+CGG + Chr7:37145788-37145807 MsG0780037963.01.T01:CDS 40.0%
TACACAACCATTTGTCCCTT+CGG - Chr7:37145631-37145650 None:intergenic 40.0%
TCAAACTCCGTAAACCTACA+TGG - Chr7:37145787-37145806 None:intergenic 40.0%
TCAACAGGTCGAGTTATACT+CGG + Chr7:37145578-37145597 MsG0780037963.01.T01:CDS 40.0%
TGATTGTCATGCTCAATCTC+CGG + Chr7:37145501-37145520 MsG0780037963.01.T01:CDS 40.0%
! ATGCCATGAAGCTTTTCAAC+AGG + Chr7:37145563-37145582 MsG0780037963.01.T01:CDS 40.0%
AATAAGACGCGGATTCGAAC+TGG + Chr7:37145466-37145485 MsG0780037963.01.T01:CDS 45.0%
AGTTTGAACGGATCAAGACC+TGG + Chr7:37145800-37145819 MsG0780037963.01.T01:CDS 45.0%
ATCAAGACCTGGATTGCATC+AGG + Chr7:37145811-37145830 MsG0780037963.01.T01:CDS 45.0%
CGACCTGTTGAAAAGCTTCA+TGG - Chr7:37145569-37145588 None:intergenic 45.0%
GGGACAAATGGTTGTGTATG+TGG + Chr7:37145633-37145652 MsG0780037963.01.T01:CDS 45.0%
GTATCGTAATCCCACCTTGA+TGG - Chr7:37145765-37145784 None:intergenic 45.0%
GTGGGATTACGATACCATGT+AGG + Chr7:37145770-37145789 MsG0780037963.01.T01:CDS 45.0%
TGTGTATGTGGGACAGAAAG+AGG + Chr7:37145645-37145664 MsG0780037963.01.T01:CDS 45.0%
TTGCATCAGGTTCCAGCAAT+TGG + Chr7:37145824-37145843 MsG0780037963.01.T01:CDS 45.0%
CCCTTCGGCACGCTGAATTT+CGG - Chr7:37145616-37145635 None:intergenic 55.0%
CCGAAATTCAGCGTGCCGAA+GGG + Chr7:37145613-37145632 MsG0780037963.01.T01:CDS 55.0%
CCTTCGGCACGCTGAATTTC+GGG - Chr7:37145615-37145634 None:intergenic 55.0%
GCTGGAACCTGATGCAATCC+AGG - Chr7:37145821-37145840 None:intergenic 55.0%
! TGGCATCCGTCGTTAGCTTG+CGG - Chr7:37145549-37145568 None:intergenic 55.0%
ATGGGGCCGCAAGCTAACGA+CGG + Chr7:37145540-37145559 MsG0780037963.01.T01:CDS 60.0%
CAGCGTGCCGAAGGGACAAA+TGG + Chr7:37145621-37145640 MsG0780037963.01.T01:CDS 60.0%
CCCGAAATTCAGCGTGCCGA+AGG + Chr7:37145612-37145631 MsG0780037963.01.T01:CDS 60.0%
CGGCACGCTGAATTTCGGGC+TGG - Chr7:37145611-37145630 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 37145460 37145855 37145460 ID=MsG0780037963.01;Name=MsG0780037963.01
Chr7 mRNA 37145460 37145855 37145460 ID=MsG0780037963.01.T01;Parent=MsG0780037963.01;Name=MsG0780037963.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|131
Chr7 exon 37145460 37145855 37145460 ID=MsG0780037963.01.T01:exon:5759;Parent=MsG0780037963.01.T01
Chr7 CDS 37145460 37145855 37145460 ID=MsG0780037963.01.T01:cds;Parent=MsG0780037963.01.T01
Gene Sequence

>MsG0780037963.01.T01

ATGTTTAATAAGACGCGGATTCGAACTGGATATCATCGCTTTGATTGTCATGCTCAATCTCCGGCAATGAAACTTCTCAAATGGGGCCGCAAGCTAACGACGGATGCCATGAAGCTTTTCAACAGGTCGAGTTATACTCGGTTAGAATCCAGCCCGAAATTCAGCGTGCCGAAGGGACAAATGGTTGTGTATGTGGGACAGAAAGAGGAAGAGATAAATAGGGTTATGGTGCCAGTGATATACTTTAACCACCCATTGTTTAGTGAATTGCTTAAAGATGTTGAAGAGGAGTATGGTTTTAACCATCAAGGTGGGATTACGATACCATGTAGGTTTACGGAGTTTGAACGGATCAAGACCTGGATTGCATCAGGTTCCAGCAATTGGACCAGTTGA

Protein sequence

>MsG0780037963.01.T01

MFNKTRIRTGYHRFDCHAQSPAMKLLKWGRKLTTDAMKLFNRSSYTRLESSPKFSVPKGQMVVYVGQKEEEINRVMVPVIYFNHPLFSELLKDVEEEYGFNHQGGITIPCRFTEFERIKTWIASGSSNWTS*