Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780035979.01.T01 | XP_003621030.1 | 97.619 | 126 | 3 | 0 | 1 | 126 | 1 | 126 | 6.91E-78 | 236 |
| MsG0780035979.01.T02 | XP_027352573.1 | 84.127 | 126 | 20 | 0 | 5 | 130 | 4 | 129 | 8.16E-67 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780035979.01.T01 | Q6NMM1 | 50 | 120 | 60 | 0 | 2 | 121 | 3 | 122 | 1.82E-37 | 127 |
| MsG0780035979.01.T02 | Q6NMM1 | 51.327 | 113 | 55 | 0 | 13 | 125 | 10 | 122 | 3.48E-34 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780035979.01.T01 | A2Q4X9 | 97.619 | 126 | 3 | 0 | 1 | 126 | 1 | 126 | 3.30e-78 | 236 |
| MsG0780035979.01.T02 | A0A371E3T0 | 86.441 | 118 | 16 | 0 | 14 | 131 | 67 | 184 | 2.74e-65 | 206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0780035979.01 | 0.809794 | 1.586683e-50 | 9.404620e-48 |
| MsG0080048462.01 | MsG0780035979.01 | 0.808882 | 2.489808e-50 | 1.440204e-47 |
| MsG0080048855.01 | MsG0780035979.01 | 0.811483 | 6.843461e-51 | 4.241345e-48 |
| MsG0080048856.01 | MsG0780035979.01 | 0.842535 | 2.437416e-58 | 3.706997e-55 |
| MsG0180000001.01 | MsG0780035979.01 | 0.800694 | 1.278044e-48 | 5.989571e-46 |
| MsG0180000139.01 | MsG0780035979.01 | 0.837079 | 6.420670e-57 | 8.248466e-54 |
| MsG0180000144.01 | MsG0780035979.01 | 0.814853 | 1.246911e-51 | 8.460621e-49 |
| MsG0180000145.01 | MsG0780035979.01 | 0.831372 | 1.732667e-55 | 1.876587e-52 |
| MsG0180000155.01 | MsG0780035979.01 | 0.818238 | 2.175920e-52 | 1.619681e-49 |
| MsG0180000209.01 | MsG0780035979.01 | 0.813114 | 3.014470e-51 | 1.951159e-48 |
| MsG0180000332.01 | MsG0780035979.01 | 0.802631 | 5.119534e-49 | 2.520155e-46 |
| MsG0180000334.01 | MsG0780035979.01 | 0.814566 | 1.443338e-51 | 9.718540e-49 |
| MsG0180000607.01 | MsG0780035979.01 | 0.807030 | 6.168918e-50 | 3.399729e-47 |
| MsG0180000835.01 | MsG0780035979.01 | 0.801636 | 8.198982e-49 | 3.935104e-46 |
| MsG0180000836.01 | MsG0780035979.01 | 0.818269 | 2.140248e-52 | 1.594550e-49 |
| MsG0180001173.01 | MsG0780035979.01 | 0.801801 | 7.586345e-49 | 3.656363e-46 |
| MsG0180001892.01 | MsG0780035979.01 | 0.805877 | 1.079640e-49 | 5.776673e-47 |
| MsG0180002547.01 | MsG0780035979.01 | 0.817657 | 2.943783e-52 | 2.156721e-49 |
| MsG0180002895.01 | MsG0780035979.01 | 0.804778 | 1.834742e-49 | 9.543603e-47 |
| MsG0180003403.01 | MsG0780035979.01 | 0.802877 | 4.553288e-49 | 2.255502e-46 |
| MsG0180003548.01 | MsG0780035979.01 | 0.811371 | 7.237726e-51 | 4.472311e-48 |
| MsG0180003572.01 | MsG0780035979.01 | 0.826168 | 3.144941e-54 | 2.926786e-51 |
| MsG0180003669.01 | MsG0780035979.01 | 0.807906 | 4.019772e-50 | 2.266295e-47 |
| MsG0180003786.01 | MsG0780035979.01 | 0.832950 | 7.055160e-56 | 8.007095e-53 |
| MsG0180003920.01 | MsG0780035979.01 | 0.844265 | 8.412877e-59 | 1.350839e-55 |
| MsG0180004050.01 | MsG0780035979.01 | 0.821975 | 3.032804e-53 | 2.505021e-50 |
| MsG0180004099.01 | MsG0780035979.01 | 0.829054 | 6.379529e-55 | 6.455385e-52 |
| MsG0180004152.01 | MsG0780035979.01 | 0.816560 | 5.192094e-52 | 3.691323e-49 |
| MsG0180004389.01 | MsG0780035979.01 | 0.848772 | 4.953370e-60 | 9.189350e-57 |
| MsG0180004481.01 | MsG0780035979.01 | 0.836147 | 1.109270e-56 | 1.385813e-53 |
| MsG0180004482.01 | MsG0780035979.01 | 0.833025 | 6.757411e-56 | 7.686999e-53 |
| MsG0180004509.01 | MsG0780035979.01 | 0.823244 | 1.537228e-53 | 1.316369e-50 |
| MsG0180004754.01 | MsG0780035979.01 | 0.829167 | 5.987770e-55 | 6.080163e-52 |
| MsG0180004779.01 | MsG0780035979.01 | 0.808516 | 2.980868e-50 | 1.707861e-47 |
| MsG0180004854.01 | MsG0780035979.01 | 0.812878 | 3.396100e-51 | 2.184433e-48 |
| MsG0180004928.01 | MsG0780035979.01 | 0.836602 | 8.501230e-57 | 1.076541e-53 |
| MsG0180005575.01 | MsG0780035979.01 | 0.850215 | 1.960694e-60 | 3.812915e-57 |
| MsG0180005746.01 | MsG0780035979.01 | 0.829712 | 4.414874e-55 | 4.555227e-52 |
| MsG0180005954.01 | MsG0780035979.01 | 0.809966 | 1.457123e-50 | 8.675485e-48 |
| MsG0180005962.01 | MsG0780035979.01 | -0.807201 | 5.675279e-50 | 3.141609e-47 |
| MsG0180005993.01 | MsG0780035979.01 | 0.841360 | 4.982731e-58 | 7.303464e-55 |
| MsG0180006000.01 | MsG0780035979.01 | 0.804216 | 2.402396e-49 | 1.231614e-46 |
| MsG0180006013.01 | MsG0780035979.01 | 0.808326 | 3.272769e-50 | 1.865883e-47 |
| MsG0180006024.01 | MsG0780035979.01 | 0.814770 | 1.300523e-51 | 8.804438e-49 |
| MsG0280006405.01 | MsG0780035979.01 | 0.833896 | 4.096925e-56 | 4.783820e-53 |
| MsG0280006422.01 | MsG0780035979.01 | 0.827777 | 1.297037e-54 | 1.264517e-51 |
| MsG0280010778.01 | MsG0780035979.01 | 0.839408 | 1.613664e-57 | 2.226520e-54 |
| MsG0280010907.01 | MsG0780035979.01 | 0.806253 | 8.998347e-50 | 4.861300e-47 |
| MsG0280010980.01 | MsG0780035979.01 | 0.828384 | 9.266446e-55 | 9.196246e-52 |
| MsG0280011003.01 | MsG0780035979.01 | 0.818214 | 2.202960e-52 | 1.638799e-49 |
| MsG0280011013.01 | MsG0780035979.01 | 0.807291 | 5.431349e-50 | 3.013659e-47 |
| MsG0280011014.01 | MsG0780035979.01 | 0.870182 | 1.770531e-66 | 6.824453e-63 |
| MsG0280011156.01 | MsG0780035979.01 | 0.811079 | 8.375196e-51 | 5.135533e-48 |
| MsG0280011258.01 | MsG0780035979.01 | 0.814967 | 1.176237e-51 | 8.005786e-49 |
| MsG0280011282.01 | MsG0780035979.01 | 0.804263 | 2.348890e-49 | 1.205636e-46 |
| MsG0280011339.01 | MsG0780035979.01 | 0.823703 | 1.200817e-53 | 1.041898e-50 |
| MsG0280011388.01 | MsG0780035979.01 | 0.878871 | 1.976466e-69 | 1.048552e-65 |
| MsG0380011755.01 | MsG0780035979.01 | 0.807660 | 4.533982e-50 | 2.539933e-47 |
| MsG0380012460.01 | MsG0780035979.01 | 0.803232 | 3.846726e-49 | 1.922790e-46 |
| MsG0380012471.01 | MsG0780035979.01 | 0.853626 | 2.110385e-61 | 4.588626e-58 |
| MsG0380013178.01 | MsG0780035979.01 | 0.807595 | 4.681554e-50 | 2.618045e-47 |
| MsG0380013475.01 | MsG0780035979.01 | 0.812810 | 3.515428e-51 | 2.256970e-48 |
| MsG0380013834.01 | MsG0780035979.01 | 0.812728 | 3.662679e-51 | 2.346714e-48 |
| MsG0380014537.01 | MsG0780035979.01 | 0.815091 | 1.103839e-51 | 7.538120e-49 |
| MsG0380014647.01 | MsG0780035979.01 | 0.837453 | 5.151677e-57 | 6.695289e-54 |
| MsG0380014681.01 | MsG0780035979.01 | 0.800458 | 1.427789e-48 | 6.651368e-46 |
| MsG0380014701.01 | MsG0780035979.01 | 0.803230 | 3.849036e-49 | 1.923895e-46 |
| MsG0380014703.01 | MsG0780035979.01 | 0.838699 | 2.463082e-57 | 3.325464e-54 |
| MsG0680030881.01 | MsG0780035979.01 | 0.804210 | 2.409501e-49 | 1.235058e-46 |
| MsG0680031488.01 | MsG0780035979.01 | 0.823913 | 1.072140e-53 | 9.356651e-51 |
| MsG0680031506.01 | MsG0780035979.01 | 0.853874 | 1.790137e-61 | 3.924907e-58 |
| MsG0680031507.01 | MsG0780035979.01 | 0.843673 | 1.212289e-58 | 1.910885e-55 |
| MsG0680031549.01 | MsG0780035979.01 | 0.855029 | 8.299364e-62 | 1.890125e-58 |
| MsG0680031628.01 | MsG0780035979.01 | 0.848769 | 4.960898e-60 | 9.202813e-57 |
| MsG0680032935.01 | MsG0780035979.01 | 0.817832 | 2.687974e-52 | 1.978807e-49 |
| MsG0680034234.01 | MsG0780035979.01 | 0.821386 | 4.150772e-53 | 3.371993e-50 |
| MsG0680034853.01 | MsG0780035979.01 | 0.827076 | 1.910404e-54 | 1.824939e-51 |
| MsG0680035346.01 | MsG0780035979.01 | 0.866491 | 2.743726e-65 | 9.264415e-62 |
| MsG0680035475.01 | MsG0780035979.01 | 0.839787 | 1.286007e-57 | 1.795073e-54 |
| MsG0680035574.01 | MsG0780035979.01 | 0.800755 | 1.242034e-48 | 5.829752e-46 |
| MsG0480018477.01 | MsG0780035979.01 | 0.821433 | 4.049229e-53 | 3.293785e-50 |
| MsG0480018894.01 | MsG0780035979.01 | 0.869638 | 2.664516e-66 | 1.007129e-62 |
| MsG0480019416.01 | MsG0780035979.01 | 0.803156 | 3.987768e-49 | 1.989509e-46 |
| MsG0480019710.01 | MsG0780035979.01 | 0.815307 | 9.888184e-52 | 6.792713e-49 |
| MsG0480019922.01 | MsG0780035979.01 | 0.807059 | 6.082610e-50 | 3.354622e-47 |
| MsG0480020495.01 | MsG0780035979.01 | 0.800300 | 1.537723e-48 | 7.135315e-46 |
| MsG0480020675.01 | MsG0780035979.01 | 0.808396 | 3.162337e-50 | 1.806201e-47 |
| MsG0480020739.01 | MsG0780035979.01 | 0.814385 | 1.582626e-51 | 1.060479e-48 |
| MsG0480020780.01 | MsG0780035979.01 | 0.838055 | 3.610243e-57 | 4.779504e-54 |
| MsG0480020879.01 | MsG0780035979.01 | 0.831382 | 1.723268e-55 | 1.866978e-52 |
| MsG0480020907.01 | MsG0780035979.01 | 0.816116 | 6.525933e-52 | 4.583767e-49 |
| MsG0480021448.01 | MsG0780035979.01 | 0.828713 | 7.715424e-55 | 7.729995e-52 |
| MsG0480021452.01 | MsG0780035979.01 | 0.825955 | 3.534967e-54 | 3.269959e-51 |
| MsG0480021453.01 | MsG0780035979.01 | 0.812729 | 3.661517e-51 | 2.346020e-48 |
| MsG0480021464.01 | MsG0780035979.01 | 0.821906 | 3.146928e-53 | 2.594343e-50 |
| MsG0480021465.01 | MsG0780035979.01 | 0.832682 | 8.223385e-56 | 9.258587e-53 |
| MsG0480022052.01 | MsG0780035979.01 | -0.809193 | 2.135357e-50 | 1.245596e-47 |
| MsG0480022164.01 | MsG0780035979.01 | 0.862998 | 3.406362e-64 | 1.017044e-60 |
| MsG0480022223.01 | MsG0780035979.01 | 0.818109 | 2.327003e-52 | 1.726068e-49 |
| MsG0480022549.01 | MsG0780035979.01 | 0.808884 | 2.487070e-50 | 1.438703e-47 |
| MsG0480022620.01 | MsG0780035979.01 | 0.807234 | 5.584392e-50 | 3.093941e-47 |
| MsG0480022696.01 | MsG0780035979.01 | 0.852670 | 3.963384e-61 | 8.344046e-58 |
| MsG0480022795.01 | MsG0780035979.01 | 0.812329 | 4.477945e-51 | 2.838943e-48 |
| MsG0480022796.01 | MsG0780035979.01 | 0.818070 | 2.374012e-52 | 1.759047e-49 |
| MsG0480022825.01 | MsG0780035979.01 | 0.816373 | 5.717675e-52 | 4.044291e-49 |
| MsG0480022855.01 | MsG0780035979.01 | 0.828428 | 9.039062e-55 | 8.982412e-52 |
| MsG0480022965.01 | MsG0780035979.01 | 0.804856 | 1.767139e-49 | 9.210806e-47 |
| MsG0480022985.01 | MsG0780035979.01 | 0.804658 | 1.943191e-49 | 1.007629e-46 |
| MsG0480023221.01 | MsG0780035979.01 | 0.809495 | 1.839553e-50 | 1.081682e-47 |
| MsG0480023272.01 | MsG0780035979.01 | 0.801598 | 8.350289e-49 | 4.003659e-46 |
| MsG0480023463.01 | MsG0780035979.01 | 0.843622 | 1.250971e-58 | 1.968854e-55 |
| MsG0480023600.01 | MsG0780035979.01 | 0.832816 | 7.616367e-56 | 8.609217e-53 |
| MsG0480023636.01 | MsG0780035979.01 | 0.801342 | 9.422307e-49 | 4.488856e-46 |
| MsG0480023657.01 | MsG0780035979.01 | 0.809408 | 1.920525e-50 | 1.126744e-47 |
| MsG0480023707.01 | MsG0780035979.01 | 0.805757 | 1.144001e-49 | 6.102598e-47 |
| MsG0480023832.01 | MsG0780035979.01 | 0.805010 | 1.640925e-49 | 8.586327e-47 |
| MsG0480023873.01 | MsG0780035979.01 | 0.802294 | 6.007034e-49 | 2.931841e-46 |
| MsG0580024197.01 | MsG0780035979.01 | 0.820340 | 7.223430e-53 | 5.700024e-50 |
| MsG0580024339.01 | MsG0780035979.01 | 0.822536 | 2.247210e-53 | 1.886317e-50 |
| MsG0580024981.01 | MsG0780035979.01 | 0.829902 | 3.969114e-55 | 4.117984e-52 |
| MsG0580025409.01 | MsG0780035979.01 | 0.803800 | 2.933076e-49 | 1.487704e-46 |
| MsG0580025587.01 | MsG0780035979.01 | 0.811608 | 6.428553e-51 | 3.997091e-48 |
| MsG0580026002.01 | MsG0780035979.01 | 0.800033 | 1.742554e-48 | 8.030704e-46 |
| MsG0580026059.01 | MsG0780035979.01 | 0.842030 | 3.315451e-58 | 4.962592e-55 |
| MsG0580026075.01 | MsG0780035979.01 | 0.819669 | 1.028664e-52 | 7.967041e-50 |
| MsG0380015027.01 | MsG0780035979.01 | 0.810014 | 1.422953e-50 | 8.483072e-48 |
| MsG0380015332.01 | MsG0780035979.01 | 0.832929 | 7.140657e-56 | 8.098846e-53 |
| MsG0380015435.01 | MsG0780035979.01 | 0.807653 | 4.549401e-50 | 2.548113e-47 |
| MsG0380015440.01 | MsG0780035979.01 | 0.802517 | 5.404241e-49 | 2.652485e-46 |
| MsG0380015555.01 | MsG0780035979.01 | 0.844974 | 5.420190e-59 | 8.900125e-56 |
| MsG0380015677.01 | MsG0780035979.01 | 0.830632 | 2.632242e-55 | 2.789119e-52 |
| MsG0380015831.01 | MsG0780035979.01 | 0.820441 | 6.849105e-53 | 5.419907e-50 |
| MsG0380016005.01 | MsG0780035979.01 | 0.801731 | 7.839751e-49 | 3.771699e-46 |
| MsG0380016067.01 | MsG0780035979.01 | 0.810063 | 1.388708e-50 | 8.289181e-48 |
| MsG0380016131.01 | MsG0780035979.01 | 0.802863 | 4.584978e-49 | 2.270414e-46 |
| MsG0380016247.01 | MsG0780035979.01 | 0.827119 | 1.865442e-54 | 1.784170e-51 |
| MsG0380016860.01 | MsG0780035979.01 | 0.840191 | 1.008883e-57 | 1.426182e-54 |
| MsG0380016970.01 | MsG0780035979.01 | 0.858202 | 9.686664e-63 | 2.452748e-59 |
| MsG0380017039.01 | MsG0780035979.01 | 0.815731 | 7.954997e-52 | 5.529226e-49 |
| MsG0380017351.01 | MsG0780035979.01 | 0.801058 | 1.076903e-48 | 5.094144e-46 |
| MsG0380017996.01 | MsG0780035979.01 | 0.807769 | 4.298513e-50 | 2.414921e-47 |
| MsG0480018163.01 | MsG0780035979.01 | 0.836281 | 1.025923e-56 | 1.287014e-53 |
| MsG0580026157.01 | MsG0780035979.01 | 0.808987 | 2.364341e-50 | 1.371488e-47 |
| MsG0580026485.01 | MsG0780035979.01 | 0.811042 | 8.531496e-51 | 5.226405e-48 |
| MsG0580026593.01 | MsG0780035979.01 | 0.809647 | 1.706245e-50 | 1.007429e-47 |
| MsG0580026718.01 | MsG0780035979.01 | 0.823069 | 1.689295e-53 | 1.439529e-50 |
| MsG0580027031.01 | MsG0780035979.01 | 0.833612 | 4.826887e-56 | 5.587406e-53 |
| MsG0580027091.01 | MsG0780035979.01 | 0.819374 | 1.201049e-52 | 9.225205e-50 |
| MsG0580027320.01 | MsG0780035979.01 | 0.811266 | 7.630981e-51 | 4.702133e-48 |
| MsG0580027431.01 | MsG0780035979.01 | 0.846568 | 2.001267e-59 | 3.459066e-56 |
| MsG0580027650.01 | MsG0780035979.01 | 0.809175 | 2.155068e-50 | 1.256460e-47 |
| MsG0580027925.01 | MsG0780035979.01 | 0.821925 | 3.115839e-53 | 2.570050e-50 |
| MsG0580028060.01 | MsG0780035979.01 | 0.826600 | 2.481778e-54 | 2.338027e-51 |
| MsG0580028394.01 | MsG0780035979.01 | 0.803545 | 3.312810e-49 | 1.669410e-46 |
| MsG0580028897.01 | MsG0780035979.01 | 0.809023 | 2.321764e-50 | 1.348107e-47 |
| MsG0580029127.01 | MsG0780035979.01 | 0.830183 | 3.389977e-55 | 3.545565e-52 |
| MsG0580029640.01 | MsG0780035979.01 | 0.810983 | 8.787100e-51 | 5.374997e-48 |
| MsG0580029729.01 | MsG0780035979.01 | 0.815014 | 1.148403e-51 | 7.826570e-49 |
| MsG0280006712.01 | MsG0780035979.01 | 0.806945 | 6.428458e-50 | 3.534934e-47 |
| MsG0280006993.01 | MsG0780035979.01 | 0.810421 | 1.162306e-50 | 7.002796e-48 |
| MsG0280007101.01 | MsG0780035979.01 | 0.801112 | 1.049694e-48 | 4.972073e-46 |
| MsG0280007196.01 | MsG0780035979.01 | 0.806449 | 8.180306e-50 | 4.441400e-47 |
| MsG0280007321.01 | MsG0780035979.01 | 0.823786 | 1.148331e-53 | 9.986341e-51 |
| MsG0280007452.01 | MsG0780035979.01 | 0.843855 | 1.083948e-58 | 1.718447e-55 |
| MsG0280007506.01 | MsG0780035979.01 | 0.821619 | 3.666127e-53 | 2.997708e-50 |
| MsG0280007527.01 | MsG0780035979.01 | 0.815317 | 9.836474e-52 | 6.759192e-49 |
| MsG0280007955.01 | MsG0780035979.01 | 0.835374 | 1.741605e-56 | 2.125757e-53 |
| MsG0280008378.01 | MsG0780035979.01 | 0.813436 | 2.562007e-51 | 1.673055e-48 |
| MsG0280008457.01 | MsG0780035979.01 | 0.827305 | 1.683817e-54 | 1.619349e-51 |
| MsG0280008615.01 | MsG0780035979.01 | 0.801881 | 7.304489e-49 | 3.527846e-46 |
| MsG0280008885.01 | MsG0780035979.01 | 0.821184 | 4.621167e-53 | 3.733298e-50 |
| MsG0280008909.01 | MsG0780035979.01 | 0.824116 | 9.608894e-54 | 8.433189e-51 |
| MsG0280009748.01 | MsG0780035979.01 | 0.819036 | 1.434063e-52 | 1.091386e-49 |
| MsG0280009794.01 | MsG0780035979.01 | 0.851470 | 8.693997e-61 | 1.761349e-57 |
| MsG0280010015.01 | MsG0780035979.01 | 0.826670 | 2.387742e-54 | 2.254189e-51 |
| MsG0280010176.01 | MsG0780035979.01 | 0.842483 | 2.516281e-58 | 3.820970e-55 |
| MsG0280010489.01 | MsG0780035979.01 | 0.826041 | 3.372194e-54 | 3.126966e-51 |
| MsG0280010491.01 | MsG0780035979.01 | 0.831111 | 2.008446e-55 | 2.158382e-52 |
| MsG0280010533.01 | MsG0780035979.01 | 0.812569 | 3.969690e-51 | 2.532708e-48 |
| MsG0680035876.01 | MsG0780035979.01 | 0.853069 | 3.048809e-61 | 6.505722e-58 |
| MsG0680035888.01 | MsG0780035979.01 | 0.833808 | 4.310957e-56 | 5.020208e-53 |
| MsG0780035979.01 | MsG0780036136.01 | 0.801708 | 7.927379e-49 | 3.811622e-46 |
| MsG0780035979.01 | MsG0780036147.01 | 0.816618 | 5.040782e-52 | 3.589397e-49 |
| MsG0780035979.01 | MsG0780036340.01 | 0.815956 | 7.085310e-52 | 4.954748e-49 |
| MsG0780035979.01 | MsG0780036477.01 | 0.838482 | 2.802107e-57 | 3.758075e-54 |
| MsG0780035979.01 | MsG0780036663.01 | 0.810087 | 1.372321e-50 | 8.196022e-48 |
| MsG0780035979.01 | MsG0780036719.01 | 0.819379 | 1.198200e-52 | 9.204442e-50 |
| MsG0780035979.01 | MsG0780036752.01 | 0.819118 | 1.373368e-52 | 1.047525e-49 |
| MsG0780035979.01 | MsG0780036810.01 | 0.806745 | 7.084319e-50 | 3.875534e-47 |
| MsG0780035979.01 | MsG0780036815.01 | 0.854303 | 1.346288e-61 | 2.993477e-58 |
| MsG0780035979.01 | MsG0780036943.01 | 0.804716 | 1.890033e-49 | 9.815593e-47 |
| MsG0780035979.01 | MsG0780037054.01 | 0.802755 | 4.826415e-49 | 2.383435e-46 |
| MsG0780035979.01 | MsG0780037141.01 | 0.819544 | 1.098623e-52 | 8.479334e-50 |
| MsG0780035979.01 | MsG0780037240.01 | 0.823059 | 1.698132e-53 | 1.446670e-50 |
| MsG0780035979.01 | MsG0780038400.01 | 0.816308 | 5.911653e-52 | 4.174359e-49 |
| MsG0780035979.01 | MsG0780038401.01 | 0.805612 | 1.227347e-49 | 6.522423e-47 |
| MsG0780035979.01 | MsG0780038424.01 | 0.818793 | 1.628714e-52 | 1.231117e-49 |
| MsG0780035979.01 | MsG0780038603.01 | 0.851795 | 7.032041e-61 | 1.439616e-57 |
| MsG0780035979.01 | MsG0780039137.01 | 0.840640 | 7.697831e-58 | 1.103377e-54 |
| MsG0780035979.01 | MsG0780039170.01 | 0.831295 | 1.810372e-55 | 1.956121e-52 |
| MsG0780035979.01 | MsG0780039243.01 | 0.821507 | 3.892368e-53 | 3.172589e-50 |
| MsG0780035979.01 | MsG0780039423.01 | 0.804971 | 1.671752e-49 | 8.739293e-47 |
| MsG0780035979.01 | MsG0780039443.01 | 0.817411 | 3.344699e-52 | 2.434062e-49 |
| MsG0780035979.01 | MsG0780039527.01 | 0.806002 | 1.016101e-49 | 5.454490e-47 |
| MsG0780035979.01 | MsG0780039866.01 | 0.820212 | 7.730138e-53 | 6.078232e-50 |
| MsG0780035979.01 | MsG0780040044.01 | 0.816241 | 6.120355e-52 | 4.313555e-49 |
| MsG0780035979.01 | MsG0780040057.01 | 0.824802 | 6.624650e-54 | 5.930348e-51 |
| MsG0780035979.01 | MsG0780040162.01 | 0.834281 | 3.282008e-56 | 3.876739e-53 |
| MsG0780035979.01 | MsG0780040529.01 | 0.852061 | 5.910866e-61 | 1.220361e-57 |
| MsG0780035979.01 | MsG0780040545.01 | 0.817579 | 3.064571e-52 | 2.240390e-49 |
| MsG0780035979.01 | MsG0780040841.01 | 0.843001 | 1.832476e-58 | 2.827357e-55 |
| MsG0780035979.01 | MsG0780040845.01 | 0.802620 | 5.145631e-49 | 2.532281e-46 |
| MsG0780035979.01 | MsG0780040926.01 | 0.836317 | 1.004299e-56 | 1.261264e-53 |
| MsG0780035979.01 | MsG0780041016.01 | 0.822583 | 2.191920e-53 | 1.842414e-50 |
| MsG0780035979.01 | MsG0780041268.01 | 0.809725 | 1.642046e-50 | 9.715028e-48 |
| MsG0780035979.01 | MsG0780041295.01 | 0.811225 | 7.788614e-51 | 4.794138e-48 |
| MsG0780035979.01 | MsG0780041392.01 | 0.828874 | 7.052738e-55 | 7.098835e-52 |
| MsG0780035979.01 | MsG0780041462.01 | 0.815904 | 7.278389e-52 | 5.082369e-49 |
| MsG0780035979.01 | MsG0780041535.01 | 0.820097 | 8.212837e-53 | 6.438017e-50 |
| MsG0780035979.01 | MsG0780041559.01 | 0.869233 | 3.610495e-66 | 1.344910e-62 |
| MsG0780035979.01 | MsG0780041584.01 | 0.810335 | 1.213484e-50 | 7.294544e-48 |
| MsG0780035979.01 | MsG0780041796.01 | 0.841657 | 4.160613e-58 | 6.154919e-55 |
| MsG0780035979.01 | MsG0880041986.01 | 0.831452 | 1.656241e-55 | 1.798112e-52 |
| MsG0780035979.01 | MsG0880042518.01 | 0.819319 | 1.236525e-52 | 9.483004e-50 |
| MsG0780035979.01 | MsG0880042519.01 | 0.803284 | 3.752067e-49 | 1.877970e-46 |
| MsG0780035979.01 | MsG0880042552.01 | 0.806320 | 8.709314e-50 | 4.712976e-47 |
| MsG0780035979.01 | MsG0880042760.01 | 0.809582 | 1.761852e-50 | 1.038467e-47 |
| MsG0780035979.01 | MsG0880042779.01 | 0.873277 | 1.665724e-67 | 7.186588e-64 |
| MsG0780035979.01 | MsG0880044415.01 | 0.818707 | 1.703166e-52 | 1.284331e-49 |
| MsG0780035979.01 | MsG0880044555.01 | 0.800078 | 1.705963e-48 | 7.871217e-46 |
| MsG0780035979.01 | MsG0880044782.01 | 0.856907 | 2.341636e-62 | 5.676650e-59 |
| MsG0780035979.01 | MsG0880044975.01 | 0.800054 | 1.725077e-48 | 7.954575e-46 |
| MsG0780035979.01 | MsG0880045145.01 | 0.850459 | 1.674723e-60 | 3.282748e-57 |
| MsG0780035979.01 | MsG0880045294.01 | 0.806796 | 6.912655e-50 | 3.786575e-47 |
| MsG0780035979.01 | MsG0880045393.01 | 0.812690 | 3.734269e-51 | 2.390192e-48 |
| MsG0780035979.01 | MsG0880045453.01 | 0.829364 | 5.366012e-55 | 5.480606e-52 |
| MsG0780035979.01 | MsG0880045653.01 | 0.825957 | 3.530320e-54 | 3.265909e-51 |
| MsG0780035979.01 | MsG0880045736.01 | 0.816375 | 5.713692e-52 | 4.041663e-49 |
| MsG0780035979.01 | MsG0880045965.01 | 0.860480 | 2.005704e-63 | 5.490898e-60 |
| MsG0780035979.01 | MsG0880046012.01 | 0.820962 | 5.197144e-53 | 4.173014e-50 |
| MsG0780035979.01 | MsG0880046284.01 | 0.851219 | 1.023635e-60 | 2.057291e-57 |
| MsG0780035979.01 | MsG0880047470.01 | 0.804448 | 2.149370e-49 | 1.108505e-46 |
| MsG0780035979.01 | MsG0880047472.01 | 0.843306 | 1.519634e-58 | 2.367993e-55 |
| MsG0780035979.01 | MsG0880047473.01 | 0.815225 | 1.031206e-51 | 7.067715e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780035979.01 | MsG0480021670.01 | PPI |
| MsG0780035979.01 | MsG0480021670.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780035979.01.T01 | MTR_7g006340 | 97.619 | 126 | 3 | 0 | 1 | 126 | 1 | 126 | 8.37e-82 | 236 |
| MsG0780035979.01.T01 | MTR_5g089500 | 50.413 | 121 | 60 | 0 | 1 | 121 | 2 | 122 | 1.58e-41 | 134 |
| MsG0780035979.01.T01 | MTR_0180s0070 | 52.679 | 112 | 53 | 0 | 10 | 121 | 6 | 117 | 5.31e-37 | 123 |
| MsG0780035979.01.T02 | MTR_7g006340 | 97.115 | 104 | 3 | 0 | 27 | 130 | 23 | 126 | 2.16e-65 | 194 |
| MsG0780035979.01.T02 | MTR_5g089500 | 50.000 | 118 | 59 | 0 | 8 | 125 | 5 | 122 | 1.95e-38 | 127 |
| MsG0780035979.01.T02 | MTR_0180s0070 | 53.097 | 113 | 53 | 0 | 13 | 125 | 5 | 117 | 1.31e-37 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780035979.01.T01 | AT1G05785 | 65.625 | 128 | 44 | 0 | 1 | 128 | 1 | 128 | 4.05e-56 | 171 |
| MsG0780035979.01.T01 | AT1G05785 | 67.213 | 122 | 40 | 0 | 1 | 122 | 1 | 122 | 8.19e-56 | 172 |
| MsG0780035979.01.T01 | AT1G05785 | 67.213 | 122 | 40 | 0 | 1 | 122 | 1 | 122 | 8.19e-56 | 172 |
| MsG0780035979.01.T01 | AT1G05785 | 67.213 | 122 | 40 | 0 | 1 | 122 | 1 | 122 | 1.32e-55 | 170 |
| MsG0780035979.01.T01 | AT1G05785 | 67.213 | 122 | 40 | 0 | 1 | 122 | 1 | 122 | 1.32e-55 | 170 |
| MsG0780035979.01.T01 | AT1G05785 | 67.213 | 122 | 40 | 0 | 1 | 122 | 1 | 122 | 1.32e-55 | 170 |
| MsG0780035979.01.T01 | AT1G05785 | 66.667 | 114 | 38 | 0 | 9 | 122 | 3 | 116 | 5.62e-50 | 155 |
| MsG0780035979.01.T01 | AT5G01430 | 51.240 | 121 | 59 | 0 | 1 | 121 | 2 | 122 | 1.19e-42 | 137 |
| MsG0780035979.01.T01 | AT5G01430 | 51.240 | 121 | 59 | 0 | 1 | 121 | 2 | 122 | 1.19e-42 | 137 |
| MsG0780035979.01.T01 | AT3G49420 | 51.240 | 121 | 59 | 0 | 1 | 121 | 2 | 122 | 1.19e-42 | 137 |
| MsG0780035979.01.T01 | AT3G49420 | 51.240 | 121 | 59 | 0 | 1 | 121 | 2 | 122 | 1.19e-42 | 137 |
| MsG0780035979.01.T01 | AT3G49420 | 51.240 | 121 | 59 | 0 | 1 | 121 | 2 | 122 | 1.19e-42 | 137 |
| MsG0780035979.01.T01 | AT3G03180 | 50.000 | 120 | 60 | 0 | 2 | 121 | 3 | 122 | 1.86e-38 | 127 |
| MsG0780035979.01.T01 | AT3G03180 | 50.000 | 120 | 60 | 0 | 2 | 121 | 3 | 122 | 4.65e-38 | 127 |
| MsG0780035979.01.T01 | AT3G03180 | 46.429 | 84 | 45 | 0 | 38 | 121 | 1 | 84 | 9.55e-21 | 80.9 |
| MsG0780035979.01.T02 | AT1G05785 | 62.400 | 125 | 47 | 0 | 8 | 132 | 4 | 128 | 2.17e-51 | 159 |
| MsG0780035979.01.T02 | AT1G05785 | 68.421 | 114 | 36 | 0 | 13 | 126 | 3 | 116 | 3.57e-51 | 159 |
| MsG0780035979.01.T02 | AT1G05785 | 63.866 | 119 | 43 | 0 | 8 | 126 | 4 | 122 | 6.52e-51 | 158 |
| MsG0780035979.01.T02 | AT1G05785 | 63.866 | 119 | 43 | 0 | 8 | 126 | 4 | 122 | 6.52e-51 | 158 |
| MsG0780035979.01.T02 | AT1G05785 | 63.866 | 119 | 43 | 0 | 8 | 126 | 4 | 122 | 6.52e-51 | 158 |
| MsG0780035979.01.T02 | AT1G05785 | 63.866 | 119 | 43 | 0 | 8 | 126 | 4 | 122 | 6.81e-51 | 159 |
| MsG0780035979.01.T02 | AT1G05785 | 63.866 | 119 | 43 | 0 | 8 | 126 | 4 | 122 | 6.81e-51 | 159 |
| MsG0780035979.01.T02 | AT5G01430 | 50.000 | 118 | 59 | 0 | 8 | 125 | 5 | 122 | 5.45e-39 | 128 |
| MsG0780035979.01.T02 | AT5G01430 | 50.000 | 118 | 59 | 0 | 8 | 125 | 5 | 122 | 5.45e-39 | 128 |
| MsG0780035979.01.T02 | AT3G49420 | 50.000 | 118 | 59 | 0 | 8 | 125 | 5 | 122 | 5.45e-39 | 128 |
| MsG0780035979.01.T02 | AT3G49420 | 50.000 | 118 | 59 | 0 | 8 | 125 | 5 | 122 | 5.45e-39 | 128 |
| MsG0780035979.01.T02 | AT3G49420 | 50.000 | 118 | 59 | 0 | 8 | 125 | 5 | 122 | 5.45e-39 | 128 |
| MsG0780035979.01.T02 | AT3G03180 | 51.327 | 113 | 55 | 0 | 13 | 125 | 10 | 122 | 3.55e-35 | 119 |
| MsG0780035979.01.T02 | AT3G03180 | 51.327 | 113 | 55 | 0 | 13 | 125 | 10 | 122 | 1.37e-34 | 119 |
| MsG0780035979.01.T02 | AT3G03180 | 46.429 | 84 | 45 | 0 | 42 | 125 | 1 | 84 | 1.37e-20 | 80.5 |
Find 7 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCATCTTCTTCACGTTTCT+TGG | 0.168278 | 7:-882673 | MsG0780035979.01.T01:CDS |
| GAGATTGGCATAGGACTAAT+TGG | 0.281662 | 7:-882700 | MsG0780035979.01.T01:CDS |
| GGCATAGGACTAATTGGTTT+TGG | 0.288547 | 7:-882694 | MsG0780035979.01.T01:CDS |
| ATCATGCATTTCTCTGACCT+TGG | 0.415598 | 7:-882742 | MsG0780035979.01.T01:intron |
| GACCGTGGTTTGCTTGCTCT+AGG | 0.538182 | 7:-882634 | MsG0780035979.01.T01:CDS |
| AAACATGCAGAGATTGGCAT+AGG | 0.608707 | 7:-882709 | MsG0780035979.01.T01:intron |
| TTCCTAGAGCAAGCAAACCA+CGG | 0.680667 | 7:+882632 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAAATAAATAAATAA+AGG | + | Chr7:881086-881105 | None:intergenic | 0.0% |
| !! | TAAGTTCTTAAAATTATTTA+TGG | - | Chr7:883089-883108 | MsG0780035979.01.T01:intron | 10.0% |
| !!! | GAAATAAAATGTTTTATTAA+TGG | + | Chr7:881699-881718 | None:intergenic | 10.0% |
| !! | TTCTTAAAATTATTTATGGA+TGG | - | Chr7:883093-883112 | MsG0780035979.01.T01:intron | 15.0% |
| !!! | TAAACCATTTTTATGATAAA+AGG | - | Chr7:880904-880923 | MsG0780035979.01.T01:CDS | 15.0% |
| !!! | TAATTTGGTTTTAAAAACAT+TGG | + | Chr7:881139-881158 | None:intergenic | 15.0% |
| !!! | TTATTTTCTTAAATTGTTAC+CGG | + | Chr7:881847-881866 | None:intergenic | 15.0% |
| !!! | TTTACCTTTTATCATAAAAA+TGG | + | Chr7:880911-880930 | None:intergenic | 15.0% |
| !!! | TTTTTAAAACCAAATTAAAC+CGG | - | Chr7:881142-881161 | MsG0780035979.01.T01:intron | 15.0% |
| !! | AAAACAATTCTTCAATTCAT+TGG | + | Chr7:882896-882915 | None:intergenic | 20.0% |
| !! | ATTTGTACAGTAAATTTATC+AGG | + | Chr7:882426-882445 | None:intergenic | 20.0% |
| !! | CATAAAAATGACAAACATAT+GGG | + | Chr7:882625-882644 | None:intergenic | 20.0% |
| !! | GGTATAATACTTGAAATTTA+TGG | - | Chr7:883225-883244 | MsG0780035979.01.T01:intron | 20.0% |
| !! | TATGGTTACATAAAACAATT+TGG | + | Chr7:880940-880959 | None:intergenic | 20.0% |
| !! | TCATAAAAATGACAAACATA+TGG | + | Chr7:882626-882645 | None:intergenic | 20.0% |
| !! | TGATTGTTTCAATGATTATT+TGG | - | Chr7:882703-882722 | MsG0780035979.01.T01:intron | 20.0% |
| !! | TTATTTAAATTGTTCAACTG+CGG | - | Chr7:881213-881232 | MsG0780035979.01.T01:intron | 20.0% |
| !! | TTTGTACAGTAAATTTATCA+GGG | + | Chr7:882425-882444 | None:intergenic | 20.0% |
| !!! | ATTTTTGCTTGTAATCAATA+TGG | - | Chr7:880706-880725 | MsG0780035979.01.T01:CDS | 20.0% |
| !!! | CTTTTTTGCAAATCTTTTAT+AGG | + | Chr7:882061-882080 | None:intergenic | 20.0% |
| !!! | GTAATTTTTTGTTTTTGCAA+AGG | + | Chr7:882864-882883 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTTGACTTAATTT+TGG | - | Chr7:881548-881567 | MsG0780035979.01.T01:intron | 20.0% |
| ! | AATGTTTCAAAAACCAAAAC+AGG | + | Chr7:881304-881323 | None:intergenic | 25.0% |
| ! | ATCAATAAATAACCTCTAAC+AGG | + | Chr7:882785-882804 | None:intergenic | 25.0% |
| ! | GGATAATGAATCATTCTATA+TGG | - | Chr7:883114-883133 | MsG0780035979.01.T01:intron | 25.0% |
| ! | GTTACATAAAACAATTTGGT+TGG | + | Chr7:880936-880955 | None:intergenic | 25.0% |
| ! | TAAATAATTCTCTCATTCTG+TGG | - | Chr7:882209-882228 | MsG0780035979.01.T01:intron | 25.0% |
| ! | TATCATACAGATATCAAAAC+TGG | + | Chr7:882395-882414 | None:intergenic | 25.0% |
| ! | TCAAGTATTATACCAACTAT+TGG | + | Chr7:883219-883238 | None:intergenic | 25.0% |
| ! | TGATATGTATTAGTGAATAC+TGG | - | Chr7:881749-881768 | MsG0780035979.01.T01:intron | 25.0% |
| ! | TTCCAAAATAAATGTGGATT+GGG | + | Chr7:882467-882486 | None:intergenic | 25.0% |
| ! | TTTAAGAACTTATGTCAAAC+TGG | + | Chr7:883081-883100 | None:intergenic | 25.0% |
| ! | TTTCCAAAATAAATGTGGAT+TGG | + | Chr7:882468-882487 | None:intergenic | 25.0% |
| !! | ACATTTATCATTGATGCTTT+TGG | - | Chr7:883326-883345 | MsG0780035979.01.T01:intron | 25.0% |
| !! | GAAACTTTTCAACTAGATTT+TGG | + | Chr7:882533-882552 | None:intergenic | 25.0% |
| !! | GTGTTTTTCCAAAATAAATG+TGG | + | Chr7:882473-882492 | None:intergenic | 25.0% |
| !! | TAAATAAAGGTGTATTGCAT+TGG | + | Chr7:881073-881092 | None:intergenic | 25.0% |
| !!! | CATGTTTTTCAAAATTTCCA+AGG | + | Chr7:881393-881412 | None:intergenic | 25.0% |
| !!! | CTTTGACTTAATTTTGGTTT+TGG | - | Chr7:881554-881573 | MsG0780035979.01.T01:intron | 25.0% |
| !!! | TACCCTTTTTTATACAGTAA+GGG | - | Chr7:882147-882166 | MsG0780035979.01.T01:intron | 25.0% |
| !!! | TGTTTTCAAGAAACAACTTA+TGG | - | Chr7:880963-880982 | MsG0780035979.01.T01:intron | 25.0% |
| !!! | TGTTTTGGTTTTTGAAACAT+TGG | - | Chr7:881303-881322 | MsG0780035979.01.T01:intron | 25.0% |
| !!! | TTACCCTTTTTTATACAGTA+AGG | - | Chr7:882146-882165 | MsG0780035979.01.T01:intron | 25.0% |
| AAACCTTGATTTAGTGAGAT+GGG | - | Chr7:882106-882125 | MsG0780035979.01.T01:intron | 30.0% | |
| AATGAATCTTAGACTCTGTT+TGG | - | Chr7:880820-880839 | MsG0780035979.01.T01:intron | 30.0% | |
| ACAACTTTAATCCGAAATGT+CGG | - | Chr7:881934-881953 | MsG0780035979.01.T01:intron | 30.0% | |
| ACACCCTTACTGTATAAAAA+AGG | + | Chr7:882153-882172 | None:intergenic | 30.0% | |
| ACCTCACAAAAATGAAAAAG+AGG | + | Chr7:883194-883213 | None:intergenic | 30.0% | |
| ATATCACAAGAGATGCATTA+GGG | + | Chr7:881735-881754 | None:intergenic | 30.0% | |
| ATGTATTAGTGAATACTGGT+AGG | - | Chr7:881753-881772 | MsG0780035979.01.T01:intron | 30.0% | |
| CACCCTTACTGTATAAAAAA+GGG | + | Chr7:882152-882171 | None:intergenic | 30.0% | |
| CTTGATCTTAGTTAGCATAA+CGG | + | Chr7:882185-882204 | None:intergenic | 30.0% | |
| GACAAACATATGGGATATAT+CGG | + | Chr7:882616-882635 | None:intergenic | 30.0% | |
| TAAACCTTGATTTAGTGAGA+TGG | - | Chr7:882105-882124 | MsG0780035979.01.T01:intron | 30.0% | |
| TCCAAGTAAAATTGATTGAC+AGG | + | Chr7:882835-882854 | None:intergenic | 30.0% | |
| TGTACTTCTAGTCACATAAT+AGG | + | Chr7:881993-882012 | None:intergenic | 30.0% | |
| TGTTTCTTGAAAACAGCTTA+TGG | + | Chr7:880958-880977 | None:intergenic | 30.0% | |
| TTTGAAAAACATGCAGAGAT+TGG | - | Chr7:881400-881419 | MsG0780035979.01.T01:intron | 30.0% | |
| TTTGTATATCACATCAGCAT+AGG | - | Chr7:882274-882293 | MsG0780035979.01.T01:intron | 30.0% | |
| ! | ATAATTCTTTTCTTTGACCG+TGG | - | Chr7:881466-881485 | MsG0780035979.01.T01:intron | 30.0% |
| ! | CATTGTTTACCTCTTTTGTA+GGG | - | Chr7:883147-883166 | MsG0780035979.01.T01:intron | 30.0% |
| ! | TCCTGTCAATCAATTTTACT+TGG | - | Chr7:882831-882850 | MsG0780035979.01.T01:intron | 30.0% |
| ! | TTCCCAATCCACATTTATTT+TGG | - | Chr7:882462-882481 | MsG0780035979.01.T01:intron | 30.0% |
| !! | TCTTTTTCATTTTTGTGAGG+TGG | - | Chr7:883193-883212 | MsG0780035979.01.T01:intron | 30.0% |
| !!! | AGATGATAGTTTTGAAGCAA+TGG | - | Chr7:882305-882324 | MsG0780035979.01.T01:intron | 30.0% |
| !!! | GATGATAGTTTTGAAGCAAT+GGG | - | Chr7:882306-882325 | MsG0780035979.01.T01:intron | 30.0% |
| AATAACCTCTTGCAAATGCA+AGG | - | Chr7:882027-882046 | MsG0780035979.01.T01:intron | 35.0% | |
| AGGAATAAACTAACCTGAAG+AGG | + | Chr7:883260-883279 | None:intergenic | 35.0% | |
| ATGTCAAACTGGATTATGAC+AGG | + | Chr7:883070-883089 | None:intergenic | 35.0% | |
| CACTAGTAGAGCAAACTATA+AGG | - | Chr7:881649-881668 | MsG0780035979.01.T01:intron | 35.0% | |
| CATATCACAAGAGATGCATT+AGG | + | Chr7:881736-881755 | None:intergenic | 35.0% | |
| CTGGTCAAACACAAATAGAA+AGG | + | Chr7:882376-882395 | None:intergenic | 35.0% | |
| TGGAATTGTCCGGTTTAATT+TGG | + | Chr7:881154-881173 | None:intergenic | 35.0% | |
| TGTGAATTGTGACACTGTTT+AGG | + | Chr7:881018-881037 | None:intergenic | 35.0% | |
| TTTAAGAGTTCTTAGCTGCA+TGG | - | Chr7:882956-882975 | MsG0780035979.01.T01:intron | 35.0% | |
| ! | GCATTGTTTACCTCTTTTGT+AGG | - | Chr7:883146-883165 | MsG0780035979.01.T01:intron | 35.0% |
| !! | CAGGTTAGTTTATTCCTTGA+CGG | - | Chr7:883263-883282 | MsG0780035979.01.T01:intron | 35.0% |
| !! | GCCTCTTTTTCATTTTTGTG+AGG | - | Chr7:883190-883209 | MsG0780035979.01.T01:intron | 35.0% |
| !!! | AATCAGATATTTTGGTTGGC+AGG | - | Chr7:881584-881603 | MsG0780035979.01.T01:intron | 35.0% |
| !!! | ATCAGATATTTTGGTTGGCA+GGG | - | Chr7:881585-881604 | MsG0780035979.01.T01:intron | 35.0% |
| !!! | CTGGAATCAGATATTTTGGT+TGG | - | Chr7:881580-881599 | MsG0780035979.01.T01:intron | 35.0% |
| !!! | TTAATTTTGGTTTTGGCGTC+TGG | - | Chr7:881561-881580 | MsG0780035979.01.T01:intron | 35.0% |
| AAACACTGACACATAGACTC+CGG | - | Chr7:881825-881844 | MsG0780035979.01.T01:intron | 40.0% | |
| AAACATGCAGAGATTGGCAT+AGG | - | Chr7:881406-881425 | MsG0780035979.01.T01:intron | 40.0% | |
| AATAACCTCTAACAGGCAAG+TGG | + | Chr7:882778-882797 | None:intergenic | 40.0% | |
| ACACTGTTTAGGAGAGCTTA+TGG | + | Chr7:881007-881026 | None:intergenic | 40.0% | |
| ATAACCTCTAACAGGCAAGT+GGG | + | Chr7:882777-882796 | None:intergenic | 40.0% | |
| ATCATGCATTTCTCTGACCT+TGG | - | Chr7:881373-881392 | MsG0780035979.01.T01:intron | 40.0% | |
| GAGATTGGCATAGGACTAAT+TGG | - | Chr7:881415-881434 | MsG0780035979.01.T01:intron | 40.0% | |
| GATCCCATCTCACTAAATCA+AGG | + | Chr7:882112-882131 | None:intergenic | 40.0% | |
| GTATAACCCATCCAACAACT+GGG | + | Chr7:883397-883416 | None:intergenic | 40.0% | |
| GTTCAATCAGTGGAATTGTC+CGG | + | Chr7:881164-881183 | None:intergenic | 40.0% | |
| ! | ATGATGACTCGTTGATTGAG+AGG | - | Chr7:882642-882661 | MsG0780035979.01.T01:CDS | 40.0% |
| ! | ATGGTTGTGTTTTCCTCTTC+AGG | - | Chr7:883244-883263 | MsG0780035979.01.T01:intron | 40.0% |
| !! | ACTATGTAGCACCGACATTT+CGG | + | Chr7:881948-881967 | None:intergenic | 40.0% |
| !! | ATTGATGCTTTTGGTTGCAG+TGG | - | Chr7:883335-883354 | MsG0780035979.01.T01:intron | 40.0% |
| !! | CAGTTGTTGGATGGGTTATA+CGG | - | Chr7:883396-883415 | MsG0780035979.01.T01:exon | 40.0% |
| !! | CTTTTGGTTGCAGTGGTTTT+TGG | - | Chr7:883342-883361 | MsG0780035979.01.T01:intron | 40.0% |
| !! | GCGTCTGGAATCAGATATTT+TGG | - | Chr7:881576-881595 | MsG0780035979.01.T01:intron | 40.0% |
| !! | GGCATAGGACTAATTGGTTT+TGG | - | Chr7:881421-881440 | MsG0780035979.01.T01:intron | 40.0% |
| !!! | TCAGATATTTTGGTTGGCAG+GGG | - | Chr7:881586-881605 | MsG0780035979.01.T01:intron | 40.0% |
| AAACTAGTTGAGCCGTGACT+TGG | - | Chr7:881259-881278 | MsG0780035979.01.T01:intron | 45.0% | |
| ACCATATCCCAGTTGTTGGA+TGG | - | Chr7:883387-883406 | MsG0780035979.01.T01:CDS | 45.0% | |
| ACTAGTGAAGAGTGACCACA+TGG | + | Chr7:881636-881655 | None:intergenic | 45.0% | |
| CAACAACTGGGATATGGTAG+AGG | + | Chr7:883385-883404 | None:intergenic | 45.0% | |
| CAGTCCAAGGAAAATGCAGT+AGG | - | Chr7:882556-882575 | MsG0780035979.01.T01:intron | 45.0% | |
| CCAGTTTAGCAGATCTAGAG+AGG | + | Chr7:882245-882264 | None:intergenic | 45.0% | |
| CCATATCCCAGTTGTTGGAT+GGG | - | Chr7:883388-883407 | MsG0780035979.01.T01:CDS | 45.0% | |
| CCTCTCTAGATCTGCTAAAC+TGG | - | Chr7:882242-882261 | MsG0780035979.01.T01:intron | 45.0% | |
| CCTCTTGCAAATGCAAGGTA+AGG | - | Chr7:882032-882051 | MsG0780035979.01.T01:intron | 45.0% | |
| CCTTACCTTGCATTTGCAAG+AGG | + | Chr7:882035-882054 | None:intergenic | 45.0% | |
| CGTATAACCCATCCAACAAC+TGG | + | Chr7:883398-883417 | None:intergenic | 45.0% | |
| CTAGTTTAAACCGCTCGAAC+CGG | + | Chr7:881246-881265 | None:intergenic | 45.0% | |
| CTCTACCATATCCCAGTTGT+TGG | - | Chr7:883383-883402 | MsG0780035979.01.T01:intron | 45.0% | |
| GAAAAGTTTCCTGCAGTCCA+AGG | - | Chr7:882543-882562 | MsG0780035979.01.T01:intron | 45.0% | |
| GGCATCTTCTTCACGTTTCT+TGG | - | Chr7:881442-881461 | MsG0780035979.01.T01:intron | 45.0% | |
| GTTGTGTCTAGTGTCTGACA+CGG | + | Chr7:881919-881938 | None:intergenic | 45.0% | |
| TAGTTTAAACCGCTCGAACC+GGG | + | Chr7:881245-881264 | None:intergenic | 45.0% | |
| TCACAAGAGATGCATTAGGG+AGG | + | Chr7:881732-881751 | None:intergenic | 45.0% | |
| TTCCTAGAGCAAGCAAACCA+CGG | + | Chr7:881486-881505 | None:intergenic | 45.0% | |
| TTTGTGAGGTGGCCAATAGT+TGG | - | Chr7:883204-883223 | MsG0780035979.01.T01:intron | 45.0% | |
| ! | GGGTAGCAATTTTGCTTGGT+TGG | - | Chr7:881606-881625 | MsG0780035979.01.T01:intron | 45.0% |
| !! | GCAAGTAGGAGCTATTTTGC+GGG | + | Chr7:882755-882774 | None:intergenic | 45.0% |
| !! | GGCAAGTAGGAGCTATTTTG+CGG | + | Chr7:882756-882775 | None:intergenic | 45.0% |
| !!! | ACCTCTTTTGTAGGGTACTG+CGG | - | Chr7:883155-883174 | MsG0780035979.01.T01:intron | 45.0% |
| AACACCAGTGTCATGTGCAG+TGG | - | Chr7:882488-882507 | MsG0780035979.01.T01:CDS | 50.0% | |
| ACACCAGTGTCATGTGCAGT+GGG | - | Chr7:882489-882508 | MsG0780035979.01.T01:CDS | 50.0% | |
| ACTTGGAGGTCTTCTCGGTT+CGG | - | Chr7:881276-881295 | MsG0780035979.01.T01:intron | 50.0% | |
| CCCATCCAACAACTGGGATA+TGG | + | Chr7:883391-883410 | None:intergenic | 50.0% | |
| GAGACTTCAAGAAGCCGTCA+AGG | + | Chr7:883280-883299 | None:intergenic | 50.0% | |
| GCTGCATGGTTGTATGCTTC+AGG | - | Chr7:882970-882989 | MsG0780035979.01.T01:intron | 50.0% | |
| GGTACTGCGGCATTTCTTCT+AGG | - | Chr7:883168-883187 | MsG0780035979.01.T01:intron | 50.0% | |
| TAACAGGCAAGTGGGCAAGT+AGG | + | Chr7:882769-882788 | None:intergenic | 50.0% | |
| TTTCCCACTGCACATGACAC+TGG | + | Chr7:882495-882514 | None:intergenic | 50.0% | |
| ! | CCACTGATTGAACCATGAGC+CGG | - | Chr7:881171-881190 | MsG0780035979.01.T01:intron | 50.0% |
| ! | CTGCATTTTCCTTGGACTGC+AGG | + | Chr7:882555-882574 | None:intergenic | 50.0% |
| ! | GCAGGGGTAGCAATTTTGCT+TGG | - | Chr7:881602-881621 | MsG0780035979.01.T01:intron | 50.0% |
| ! | GCTGCCTACTGCATTTTCCT+TGG | + | Chr7:882563-882582 | None:intergenic | 50.0% |
| CCGAGAAGACCTCCAAGTCA+CGG | + | Chr7:881274-881293 | None:intergenic | 55.0% | |
| CCGGCTCATGGTTCAATCAG+TGG | + | Chr7:881174-881193 | None:intergenic | 55.0% | |
| CTTGCCCACTTGCCTGTTAG+AGG | - | Chr7:882770-882789 | MsG0780035979.01.T01:intron | 55.0% | |
| GCCGCAGTACCCTACAAAAG+AGG | + | Chr7:883159-883178 | None:intergenic | 55.0% | |
| GTTCAACTGCGGTTTCGTCC+CGG | - | Chr7:881224-881243 | MsG0780035979.01.T01:intron | 55.0% | |
| TGCTTGGTTGGCGTTCCATG+TGG | - | Chr7:881618-881637 | MsG0780035979.01.T01:intron | 55.0% | |
| ! | CCGTGACTTGGAGGTCTTCT+CGG | - | Chr7:881271-881290 | MsG0780035979.01.T01:intron | 55.0% |
| ! | CTAGTTGAGCCGTGACTTGG+AGG | - | Chr7:881262-881281 | MsG0780035979.01.T01:intron | 55.0% |
| !! | CTGTAGACAATGCCGGCTCA+TGG | + | Chr7:881186-881205 | None:intergenic | 55.0% |
| !! | GACCGTGGTTTGCTTGCTCT+AGG | - | Chr7:881481-881500 | MsG0780035979.01.T01:intron | 55.0% |
| !!! | TCTCGGTTCGGTGCCTGTTT+TGG | - | Chr7:881288-881307 | MsG0780035979.01.T01:intron | 55.0% |
| CCGGCATTGTCTACAGCGCT+CGG | - | Chr7:881190-881209 | MsG0780035979.01.T01:intron | 60.0% | |
| ! | CCGAGCGCTGTAGACAATGC+CGG | + | Chr7:881193-881212 | None:intergenic | 60.0% |
| ! | CGGTTTCGTCCCGGTTCGAG+CGG | - | Chr7:881233-881252 | MsG0780035979.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 880692 | 883445 | 880692 | ID=MsG0780035979.01;Name=MsG0780035979.01 |
| Chr7 | mRNA | 880692 | 883445 | 880692 | ID=MsG0780035979.01.T01;Parent=MsG0780035979.01;Name=MsG0780035979.01.T01;_AED=0.46;_eAED=0.49;_QI=33|1|0.8|1|0|0|5|0|129 |
| Chr7 | exon | 882630 | 882721 | 882630 | ID=MsG0780035979.01.T01:exon:6397;Parent=MsG0780035979.01.T01 |
| Chr7 | exon | 883385 | 883445 | 883385 | ID=MsG0780035979.01.T01:exon:6396;Parent=MsG0780035979.01.T01 |
| Chr7 | five_prime_UTR | 883413 | 883445 | 883413 | ID=MsG0780035979.01.T01:five_prime_utr;Parent=MsG0780035979.01.T01 |
| Chr7 | CDS | 883385 | 883412 | 883385 | ID=MsG0780035979.01.T01:cds;Parent=MsG0780035979.01.T01 |
| Chr7 | CDS | 882630 | 882721 | 882630 | ID=MsG0780035979.01.T01:cds;Parent=MsG0780035979.01.T01 |
| Chr7 | CDS | 882467 | 882547 | 882467 | ID=MsG0780035979.01.T01:cds;Parent=MsG0780035979.01.T01 |
| Chr7 | CDS | 880872 | 880969 | 880872 | ID=MsG0780035979.01.T01:cds;Parent=MsG0780035979.01.T01 |
| Chr7 | CDS | 880692 | 880782 | 880692 | ID=MsG0780035979.01.T01:cds;Parent=MsG0780035979.01.T01 |
| Chr7 | mRNA | 880692 | 882761 | 880692 | ID=MsG0780035979.01.T02;Parent=MsG0780035979.01;Name=MsG0780035979.01.T02;_AED=0.47;_eAED=0.54;_QI=0|1|0.5|1|0|0|4|0|133 |
| Chr7 | exon | 882630 | 882761 | 882630 | ID=MsG0780035979.01.T02:exon:6401;Parent=MsG0780035979.01.T02 |
| Chr7 | CDS | 882630 | 882761 | 882630 | ID=MsG0780035979.01.T02:cds;Parent=MsG0780035979.01.T02 |
| Chr7 | CDS | 882467 | 882547 | 882467 | ID=MsG0780035979.01.T02:cds;Parent=MsG0780035979.01.T02 |
| Chr7 | CDS | 880872 | 880969 | 880872 | ID=MsG0780035979.01.T02:cds;Parent=MsG0780035979.01.T02 |
| Chr7 | CDS | 880692 | 880782 | 880692 | ID=MsG0780035979.01.T02:cds;Parent=MsG0780035979.01.T02 |
| Gene Sequence |
| Protein sequence |
