Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004160.01.T01 | XP_003591816.1 | 98.315 | 178 | 3 | 0 | 1 | 178 | 1 | 178 | 6.20E-125 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004160.01.T01 | P32294 | 70.833 | 192 | 42 | 3 | 1 | 178 | 1 | 192 | 5.89E-95 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004160.01.T01 | G7I486 | 98.315 | 178 | 3 | 0 | 1 | 178 | 1 | 178 | 2.96e-125 | 359 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048383.01 | MsG0180004160.01 | 0.822641 | 2.125180e-53 | 1.789187e-50 |
| MsG0080048687.01 | MsG0180004160.01 | 0.821603 | 3.698401e-53 | 3.022673e-50 |
| MsG0080048843.01 | MsG0180004160.01 | 0.806505 | 7.964061e-50 | 4.329999e-47 |
| MsG0080048968.01 | MsG0180004160.01 | 0.801025 | 1.093981e-48 | 5.170625e-46 |
| MsG0080049135.01 | MsG0180004160.01 | 0.812880 | 3.393706e-51 | 2.182993e-48 |
| MsG0180000001.01 | MsG0180004160.01 | 0.808976 | 2.376849e-50 | 1.378367e-47 |
| MsG0180000023.01 | MsG0180004160.01 | 0.823924 | 1.065944e-53 | 9.305235e-51 |
| MsG0180000144.01 | MsG0180004160.01 | 0.805896 | 1.069818e-49 | 5.726956e-47 |
| MsG0180000331.01 | MsG0180004160.01 | 0.809846 | 1.546328e-50 | 9.177657e-48 |
| MsG0180000611.01 | MsG0180004160.01 | 0.827447 | 1.556825e-54 | 1.503423e-51 |
| MsG0180000806.01 | MsG0180004160.01 | 0.801347 | 9.398280e-49 | 4.478021e-46 |
| MsG0180000824.01 | MsG0180004160.01 | 0.811066 | 8.429174e-51 | 5.166833e-48 |
| MsG0180001173.01 | MsG0180004160.01 | 0.814185 | 1.752482e-51 | 1.167859e-48 |
| MsG0180001237.01 | MsG0180004160.01 | 0.811916 | 5.509171e-51 | 3.453516e-48 |
| MsG0180001260.01 | MsG0180004160.01 | 0.803391 | 3.564672e-49 | 1.789143e-46 |
| MsG0180001566.01 | MsG0180004160.01 | 0.809658 | 1.696886e-50 | 1.002188e-47 |
| MsG0180001911.01 | MsG0180004160.01 | 0.814359 | 1.604195e-51 | 1.074058e-48 |
| MsG0180002992.01 | MsG0180004160.01 | 0.811699 | 6.142378e-51 | 3.828308e-48 |
| MsG0180003181.01 | MsG0180004160.01 | 0.829584 | 4.743310e-55 | 4.875317e-52 |
| MsG0180003303.01 | MsG0180004160.01 | 0.801615 | 8.280829e-49 | 3.972213e-46 |
| MsG0180003793.01 | MsG0180004160.01 | 0.806681 | 7.310020e-50 | 3.992211e-47 |
| MsG0180003922.01 | MsG0180004160.01 | 0.816378 | 5.702560e-52 | 4.034196e-49 |
| MsG0180003932.01 | MsG0180004160.01 | 0.821126 | 4.764165e-53 | 3.842597e-50 |
| MsG0180003984.01 | MsG0180004160.01 | 0.815903 | 7.283845e-52 | 5.085930e-49 |
| MsG0180004016.01 | MsG0180004160.01 | 0.817799 | 2.733457e-52 | 2.010509e-49 |
| MsG0180004128.01 | MsG0180004160.01 | 0.802909 | 4.485602e-49 | 2.223802e-46 |
| MsG0180004160.01 | MsG0180004272.01 | 0.915850 | 3.601797e-85 | 9.612155e-81 |
| MsG0180004160.01 | MsG0180004437.01 | 0.815608 | 8.473366e-52 | 5.869638e-49 |
| MsG0180004160.01 | MsG0180004767.01 | 0.804530 | 2.067066e-49 | 1.068254e-46 |
| MsG0180004160.01 | MsG0180004843.01 | 0.805569 | 1.253159e-49 | 6.651992e-47 |
| MsG0180004160.01 | MsG0180004991.01 | 0.833997 | 3.865591e-56 | 4.527278e-53 |
| MsG0180004160.01 | MsG0180005049.01 | 0.843943 | 1.026643e-58 | 1.632063e-55 |
| MsG0180004160.01 | MsG0180005443.01 | 0.843185 | 1.637287e-58 | 2.541070e-55 |
| MsG0180004160.01 | MsG0180005451.01 | 0.850744 | 1.392576e-60 | 2.755305e-57 |
| MsG0180004160.01 | MsG0180005493.01 | 0.831067 | 2.059914e-55 | 2.210882e-52 |
| MsG0180004160.01 | MsG0180005765.01 | 0.808021 | 3.800307e-50 | 2.149173e-47 |
| MsG0180004160.01 | MsG0180006025.01 | 0.813890 | 2.035774e-51 | 1.345854e-48 |
| MsG0180004160.01 | MsG0280006368.01 | 0.801305 | 9.584563e-49 | 4.561958e-46 |
| MsG0180004160.01 | MsG0280006519.01 | 0.807582 | 4.711453e-50 | 2.633870e-47 |
| MsG0180004160.01 | MsG0280006545.01 | 0.822306 | 2.542039e-53 | 2.119738e-50 |
| MsG0180004160.01 | MsG0280006679.01 | 0.816747 | 4.714729e-52 | 3.369120e-49 |
| MsG0180004160.01 | MsG0280006881.01 | 0.806600 | 7.602148e-50 | 4.143297e-47 |
| MsG0180004160.01 | MsG0280007372.01 | 0.817990 | 2.475912e-52 | 1.830571e-49 |
| MsG0180004160.01 | MsG0280007440.01 | 0.841215 | 5.438419e-58 | 7.935171e-55 |
| MsG0180004160.01 | MsG0280007551.01 | 0.804108 | 2.530972e-49 | 1.293948e-46 |
| MsG0180004160.01 | MsG0280008004.01 | 0.843473 | 1.370991e-58 | 2.147393e-55 |
| MsG0180004160.01 | MsG0280008909.01 | 0.811914 | 5.516135e-51 | 3.457633e-48 |
| MsG0180004160.01 | MsG0280009141.01 | 0.822289 | 2.565136e-53 | 2.137993e-50 |
| MsG0180004160.01 | MsG0280009270.01 | 0.806784 | 6.951020e-50 | 3.806446e-47 |
| MsG0180004160.01 | MsG0280009575.01 | 0.804125 | 2.509398e-49 | 1.283505e-46 |
| MsG0180004160.01 | MsG0280010002.01 | 0.810646 | 1.039516e-50 | 6.300858e-48 |
| MsG0180004160.01 | MsG0280010022.01 | 0.815423 | 9.316638e-52 | 6.420740e-49 |
| MsG0180004160.01 | MsG0280010547.01 | 0.802311 | 5.958032e-49 | 2.909318e-46 |
| MsG0180004160.01 | MsG0380011614.01 | 0.823276 | 1.511632e-53 | 1.295583e-50 |
| MsG0180004160.01 | MsG0380011927.01 | 0.806154 | 9.442637e-50 | 5.088244e-47 |
| MsG0180004160.01 | MsG0380013579.01 | 0.822927 | 1.822527e-53 | 1.546837e-50 |
| MsG0180004160.01 | MsG0380013641.01 | 0.803261 | 3.792157e-49 | 1.896973e-46 |
| MsG0180004160.01 | MsG0380013686.01 | 0.805497 | 1.297374e-49 | 6.874041e-47 |
| MsG0180004160.01 | MsG0380014175.01 | 0.832084 | 1.156491e-55 | 1.279146e-52 |
| MsG0180004160.01 | MsG0380014576.01 | 0.805209 | 1.491083e-49 | 7.842259e-47 |
| MsG0180004160.01 | MsG0380014778.01 | 0.817784 | 2.755545e-52 | 2.025911e-49 |
| MsG0180004160.01 | MsG0380014908.01 | 0.802384 | 5.756365e-49 | 2.816040e-46 |
| MsG0180004160.01 | MsG0380015118.01 | 0.831041 | 2.089458e-55 | 2.240833e-52 |
| MsG0180004160.01 | MsG0380015220.01 | 0.821075 | 4.895602e-53 | 3.943188e-50 |
| MsG0180004160.01 | MsG0380015512.01 | 0.800439 | 1.440754e-48 | 6.708739e-46 |
| MsG0180004160.01 | MsG0380016132.01 | 0.812702 | 3.710975e-51 | 2.376027e-48 |
| MsG0180004160.01 | MsG0380016985.01 | 0.814029 | 1.897263e-51 | 1.258995e-48 |
| MsG0180004160.01 | MsG0380017431.01 | 0.844811 | 6.000600e-59 | 9.802203e-56 |
| MsG0180004160.01 | MsG0380017476.01 | 0.800919 | 1.149812e-48 | 5.419786e-46 |
| MsG0180004160.01 | MsG0380017719.01 | 0.815875 | 7.387285e-52 | 5.154345e-49 |
| MsG0180004160.01 | MsG0380017797.01 | 0.804927 | 1.707714e-49 | 8.917494e-47 |
| MsG0180004160.01 | MsG0480018235.01 | 0.837190 | 6.016030e-57 | 7.755235e-54 |
| MsG0180004160.01 | MsG0480018292.01 | 0.834531 | 2.840406e-56 | 3.380371e-53 |
| MsG0180004160.01 | MsG0480019380.01 | 0.802563 | 5.288174e-49 | 2.598562e-46 |
| MsG0180004160.01 | MsG0480019404.01 | 0.803872 | 2.832696e-49 | 1.439553e-46 |
| MsG0180004160.01 | MsG0480019984.01 | -0.801770 | 7.696433e-49 | 3.706405e-46 |
| MsG0180004160.01 | MsG0480020331.01 | 0.849603 | 2.908113e-60 | 5.542406e-57 |
| MsG0180004160.01 | MsG0480020591.01 | 0.813544 | 2.426033e-51 | 1.588922e-48 |
| MsG0180004160.01 | MsG0480020719.01 | 0.800665 | 1.295475e-48 | 6.066998e-46 |
| MsG0180004160.01 | MsG0480022026.01 | 0.807554 | 4.776758e-50 | 2.668517e-47 |
| MsG0180004160.01 | MsG0480022094.01 | 0.812003 | 5.274502e-51 | 3.314395e-48 |
| MsG0180004160.01 | MsG0480022115.01 | 0.832717 | 8.058883e-56 | 9.083306e-53 |
| MsG0180004160.01 | MsG0480022228.01 | 0.803464 | 3.442563e-49 | 1.731133e-46 |
| MsG0180004160.01 | MsG0480022780.01 | 0.821167 | 4.662137e-53 | 3.764441e-50 |
| MsG0180004160.01 | MsG0480023240.01 | 0.815352 | 9.659458e-52 | 6.644089e-49 |
| MsG0180004160.01 | MsG0480023377.01 | 0.822308 | 2.538970e-53 | 2.117296e-50 |
| MsG0180004160.01 | MsG0480023387.01 | 0.808240 | 3.413075e-50 | 1.941468e-47 |
| MsG0180004160.01 | MsG0480023559.01 | 0.822818 | 1.932256e-53 | 1.634917e-50 |
| MsG0180004160.01 | MsG0580024191.01 | 0.821520 | 3.865620e-53 | 3.151993e-50 |
| MsG0180004160.01 | MsG0580024421.01 | 0.806394 | 8.402190e-50 | 4.555255e-47 |
| MsG0180004160.01 | MsG0580024819.01 | 0.820294 | 7.399413e-53 | 5.831408e-50 |
| MsG0180004160.01 | MsG0580026864.01 | 0.802276 | 6.058469e-49 | 2.955544e-46 |
| MsG0180004160.01 | MsG0580027464.01 | 0.807627 | 4.609193e-50 | 2.579841e-47 |
| MsG0180004160.01 | MsG0580028094.01 | 0.806073 | 9.820637e-50 | 5.280949e-47 |
| MsG0180004160.01 | MsG0580028597.01 | 0.833536 | 5.041573e-56 | 5.823049e-53 |
| MsG0180004160.01 | MsG0580029258.01 | 0.812712 | 3.692330e-51 | 2.364673e-48 |
| MsG0180004160.01 | MsG0580029550.01 | 0.809287 | 2.038712e-50 | 1.192206e-47 |
| MsG0180004160.01 | MsG0580029588.01 | 0.860259 | 2.339036e-63 | 6.354361e-60 |
| MsG0180004160.01 | MsG0580029628.01 | 0.842012 | 3.352061e-58 | 5.014574e-55 |
| MsG0180004160.01 | MsG0580029801.01 | 0.857465 | 1.602555e-62 | 3.959028e-59 |
| MsG0180004160.01 | MsG0580030003.01 | 0.822676 | 2.085412e-53 | 1.757401e-50 |
| MsG0180004160.01 | MsG0580030204.01 | 0.801074 | 1.068978e-48 | 5.058563e-46 |
| MsG0180004160.01 | MsG0680031699.01 | 0.805400 | 1.359559e-49 | 7.185748e-47 |
| MsG0180004160.01 | MsG0680032075.01 | 0.807946 | 3.943104e-50 | 2.225484e-47 |
| MsG0180004160.01 | MsG0680035306.01 | 0.832956 | 7.031883e-56 | 7.982053e-53 |
| MsG0180004160.01 | MsG0680035463.01 | 0.817439 | 3.296282e-52 | 2.400626e-49 |
| MsG0180004160.01 | MsG0780035937.01 | 0.802445 | 5.590530e-49 | 2.739056e-46 |
| MsG0180004160.01 | MsG0780036240.01 | 0.838727 | 2.422363e-57 | 3.273284e-54 |
| MsG0180004160.01 | MsG0780036845.01 | 0.800698 | 1.275325e-48 | 5.977398e-46 |
| MsG0180004160.01 | MsG0780038443.01 | 0.813210 | 2.872082e-51 | 1.863901e-48 |
| MsG0180004160.01 | MsG0780038892.01 | 0.820765 | 5.768539e-53 | 4.606064e-50 |
| MsG0180004160.01 | MsG0780039340.01 | 0.807733 | 4.375929e-50 | 2.456150e-47 |
| MsG0180004160.01 | MsG0780039828.01 | 0.805594 | 1.238000e-49 | 6.575898e-47 |
| MsG0180004160.01 | MsG0780040125.01 | 0.812806 | 3.522880e-51 | 2.261495e-48 |
| MsG0180004160.01 | MsG0780040190.01 | 0.814845 | 1.252115e-51 | 8.494187e-49 |
| MsG0180004160.01 | MsG0780040208.01 | 0.807364 | 5.241761e-50 | 2.913867e-47 |
| MsG0180004160.01 | MsG0780040418.01 | 0.839373 | 1.647442e-57 | 2.270643e-54 |
| MsG0180004160.01 | MsG0780040424.01 | 0.801167 | 1.023079e-48 | 4.852624e-46 |
| MsG0180004160.01 | MsG0780040519.01 | 0.803797 | 2.936966e-49 | 1.489569e-46 |
| MsG0180004160.01 | MsG0780040569.01 | 0.828137 | 1.062528e-54 | 1.046915e-51 |
| MsG0180004160.01 | MsG0780040697.01 | 0.813871 | 2.054936e-51 | 1.357825e-48 |
| MsG0180004160.01 | MsG0780041193.01 | 0.814466 | 1.518680e-51 | 1.019840e-48 |
| MsG0180004160.01 | MsG0780041258.01 | 0.816644 | 4.973203e-52 | 3.543775e-49 |
| MsG0180004160.01 | MsG0780041300.01 | 0.806809 | 6.867203e-50 | 3.763085e-47 |
| MsG0180004160.01 | MsG0780041390.01 | 0.819260 | 1.274851e-52 | 9.761904e-50 |
| MsG0180004160.01 | MsG0780041423.01 | 0.822673 | 2.088228e-53 | 1.759674e-50 |
| MsG0180004160.01 | MsG0880042033.01 | 0.814226 | 1.715835e-51 | 1.144695e-48 |
| MsG0180004160.01 | MsG0880042128.01 | 0.813816 | 2.113697e-51 | 1.394548e-48 |
| MsG0180004160.01 | MsG0880042399.01 | -0.822352 | 2.479841e-53 | 2.070646e-50 |
| MsG0180004160.01 | MsG0880042760.01 | 0.830316 | 3.145662e-55 | 3.302352e-52 |
| MsG0180004160.01 | MsG0880042795.01 | 0.825499 | 4.533910e-54 | 4.139668e-51 |
| MsG0180004160.01 | MsG0880042978.01 | 0.800814 | 1.207742e-48 | 5.677302e-46 |
| MsG0180004160.01 | MsG0880043194.01 | 0.810726 | 9.986260e-51 | 6.066179e-48 |
| MsG0180004160.01 | MsG0880045329.01 | 0.821444 | 4.024110e-53 | 3.274386e-50 |
| MsG0180004160.01 | MsG0880045656.01 | 0.825079 | 5.698891e-54 | 5.141983e-51 |
| MsG0180004160.01 | MsG0880046027.01 | 0.807484 | 4.941210e-50 | 2.755534e-47 |
| MsG0180004160.01 | MsG0880046068.01 | 0.817691 | 2.891693e-52 | 2.120542e-49 |
| MsG0180004160.01 | MsG0880046074.01 | 0.831701 | 1.437671e-55 | 1.572490e-52 |
| MsG0180004160.01 | MsG0880046177.01 | 0.808906 | 2.459686e-50 | 1.423716e-47 |
| MsG0180004160.01 | MsG0880046933.01 | 0.807657 | 4.541567e-50 | 2.543939e-47 |
| MsG0180004160.01 | MsG0880047428.01 | 0.821980 | 3.025356e-53 | 2.499208e-50 |
| MsG0180004160.01 | MsG0880047743.01 | 0.830947 | 2.204025e-55 | 2.357175e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004160.01.T01 | MTR_1g076270 | 98.315 | 178 | 3 | 0 | 1 | 178 | 1 | 178 | 7.51e-129 | 359 |
| MsG0180004160.01.T01 | MTR_1g093350 | 98.315 | 178 | 3 | 0 | 1 | 178 | 1 | 178 | 7.51e-129 | 359 |
| MsG0180004160.01.T01 | MTR_1g040675 | 73.626 | 182 | 34 | 3 | 11 | 178 | 1 | 182 | 5.16e-92 | 266 |
| MsG0180004160.01.T01 | MTR_1g070830 | 59.701 | 201 | 58 | 5 | 1 | 178 | 1 | 201 | 6.26e-80 | 236 |
| MsG0180004160.01.T01 | MTR_1g040675 | 70.370 | 162 | 34 | 3 | 11 | 158 | 1 | 162 | 1.54e-75 | 223 |
| MsG0180004160.01.T01 | MTR_6g488150 | 42.609 | 230 | 72 | 5 | 9 | 178 | 13 | 242 | 5.38e-53 | 169 |
| MsG0180004160.01.T01 | MTR_1g093240 | 45.161 | 217 | 70 | 6 | 11 | 178 | 8 | 224 | 8.06e-51 | 163 |
| MsG0180004160.01.T01 | MTR_1g093240 | 45.161 | 217 | 70 | 6 | 11 | 178 | 8 | 224 | 1.20e-50 | 163 |
| MsG0180004160.01.T01 | MTR_1g080860 | 42.291 | 227 | 72 | 6 | 11 | 178 | 15 | 241 | 1.84e-49 | 160 |
| MsG0180004160.01.T01 | MTR_1g080860 | 42.291 | 227 | 72 | 6 | 11 | 178 | 15 | 241 | 2.29e-49 | 160 |
| MsG0180004160.01.T01 | MTR_7g096090 | 53.642 | 151 | 44 | 4 | 53 | 178 | 89 | 238 | 5.14e-48 | 156 |
| MsG0180004160.01.T01 | MTR_5g030710 | 45.304 | 181 | 68 | 4 | 29 | 178 | 143 | 323 | 1.30e-47 | 158 |
| MsG0180004160.01.T01 | MTR_1g070520 | 41.441 | 222 | 65 | 6 | 16 | 178 | 18 | 233 | 1.94e-46 | 152 |
| MsG0180004160.01.T01 | MTR_5g067350 | 47.126 | 174 | 62 | 5 | 30 | 178 | 167 | 335 | 1.67e-45 | 153 |
| MsG0180004160.01.T01 | MTR_8g067530 | 47.159 | 176 | 64 | 5 | 29 | 178 | 172 | 344 | 1.87e-45 | 153 |
| MsG0180004160.01.T01 | MTR_2g101500 | 53.020 | 149 | 43 | 4 | 57 | 178 | 166 | 314 | 2.47e-45 | 152 |
| MsG0180004160.01.T01 | MTR_8g103030 | 47.802 | 182 | 66 | 6 | 26 | 178 | 100 | 281 | 7.64e-44 | 147 |
| MsG0180004160.01.T01 | MTR_4g011880 | 47.337 | 169 | 80 | 4 | 11 | 178 | 6 | 166 | 9.47e-42 | 138 |
| MsG0180004160.01.T01 | MTR_1g093240 | 41.624 | 197 | 66 | 6 | 11 | 158 | 8 | 204 | 4.04e-38 | 130 |
| MsG0180004160.01.T01 | MTR_2g102490 | 44.186 | 172 | 75 | 6 | 13 | 170 | 16 | 180 | 3.82e-31 | 112 |
| MsG0180004160.01.T01 | MTR_6g488150 | 38.182 | 165 | 56 | 4 | 9 | 127 | 13 | 177 | 3.11e-28 | 104 |
| MsG0180004160.01.T01 | MTR_1g069495 | 33.333 | 177 | 57 | 4 | 62 | 178 | 81 | 256 | 3.13e-26 | 101 |
| MsG0180004160.01.T01 | MTR_8g014520 | 36.420 | 162 | 57 | 5 | 55 | 174 | 103 | 260 | 4.74e-25 | 97.8 |
| MsG0180004160.01.T01 | MTR_4g124300 | 37.984 | 129 | 77 | 2 | 48 | 175 | 58 | 184 | 4.98e-25 | 95.9 |
| MsG0180004160.01.T01 | MTR_8g014520 | 36.420 | 162 | 57 | 5 | 55 | 174 | 103 | 260 | 5.01e-25 | 97.8 |
| MsG0180004160.01.T01 | MTR_2g100780 | 32.558 | 172 | 67 | 3 | 50 | 174 | 85 | 254 | 1.83e-24 | 96.7 |
| MsG0180004160.01.T01 | MTR_2g100780 | 33.721 | 172 | 65 | 4 | 50 | 174 | 85 | 254 | 2.18e-24 | 96.3 |
| MsG0180004160.01.T01 | MTR_5g067350 | 44.037 | 109 | 44 | 3 | 30 | 125 | 167 | 271 | 2.11e-21 | 88.6 |
| MsG0180004160.01.T01 | MTR_1g085750 | 43.820 | 89 | 49 | 1 | 84 | 171 | 82 | 170 | 1.73e-19 | 81.3 |
| MsG0180004160.01.T01 | MTR_7g110790 | 40.426 | 94 | 55 | 1 | 79 | 171 | 62 | 155 | 1.27e-18 | 78.6 |
| MsG0180004160.01.T01 | MTR_3g106850 | 31.538 | 130 | 69 | 3 | 64 | 178 | 89 | 213 | 1.66e-18 | 79.7 |
| MsG0180004160.01.T01 | MTR_4g115075 | 30.579 | 121 | 63 | 3 | 64 | 171 | 93 | 205 | 3.58e-16 | 73.2 |
| MsG0180004160.01.T01 | MTR_1g085750 | 42.105 | 76 | 43 | 1 | 84 | 158 | 82 | 157 | 2.01e-13 | 65.1 |
| MsG0180004160.01.T01 | MTR_1g109510 | 37.607 | 117 | 62 | 4 | 64 | 171 | 54 | 168 | 2.98e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004160.01.T01 | AT1G04240 | 61.326 | 181 | 57 | 4 | 11 | 178 | 5 | 185 | 2.35e-77 | 229 |
| MsG0180004160.01.T01 | AT1G04240 | 61.326 | 181 | 57 | 4 | 11 | 178 | 105 | 285 | 1.25e-76 | 231 |
| MsG0180004160.01.T01 | AT5G43700 | 62.295 | 183 | 62 | 3 | 1 | 178 | 1 | 181 | 1.65e-76 | 227 |
| MsG0180004160.01.T01 | AT3G23030 | 60.112 | 178 | 53 | 4 | 5 | 175 | 1 | 167 | 7.61e-69 | 207 |
| MsG0180004160.01.T01 | AT3G23030 | 59.777 | 179 | 54 | 4 | 4 | 175 | 87 | 254 | 2.27e-68 | 209 |
| MsG0180004160.01.T01 | AT4G14560 | 61.677 | 167 | 57 | 3 | 9 | 175 | 5 | 164 | 2.41e-65 | 198 |
| MsG0180004160.01.T01 | AT3G04730 | 45.089 | 224 | 66 | 6 | 11 | 178 | 2 | 224 | 1.80e-53 | 170 |
| MsG0180004160.01.T01 | AT4G14550 | 45.833 | 216 | 69 | 7 | 11 | 178 | 1 | 216 | 1.08e-52 | 168 |
| MsG0180004160.01.T01 | AT4G14550 | 46.759 | 216 | 67 | 8 | 11 | 178 | 1 | 216 | 1.54e-52 | 167 |
| MsG0180004160.01.T01 | AT3G23050 | 44.889 | 225 | 67 | 8 | 11 | 178 | 6 | 230 | 2.31e-51 | 165 |
| MsG0180004160.01.T01 | AT1G04250 | 43.256 | 215 | 73 | 5 | 10 | 178 | 6 | 217 | 8.84e-51 | 163 |
| MsG0180004160.01.T01 | AT4G29080 | 42.248 | 258 | 61 | 8 | 9 | 178 | 36 | 293 | 1.36e-50 | 165 |
| MsG0180004160.01.T01 | AT3G15540 | 45.989 | 187 | 76 | 5 | 11 | 177 | 6 | 187 | 4.63e-45 | 147 |
| MsG0180004160.01.T01 | AT1G15580 | 49.419 | 172 | 70 | 6 | 9 | 177 | 6 | 163 | 7.28e-44 | 143 |
| MsG0180004160.01.T01 | AT2G22670 | 47.468 | 158 | 56 | 4 | 48 | 178 | 150 | 307 | 2.35e-42 | 144 |
| MsG0180004160.01.T01 | AT2G22670 | 47.468 | 158 | 56 | 4 | 48 | 178 | 150 | 307 | 2.35e-42 | 144 |
| MsG0180004160.01.T01 | AT2G22670 | 47.468 | 158 | 56 | 4 | 48 | 178 | 150 | 307 | 2.71e-42 | 144 |
| MsG0180004160.01.T01 | AT2G22670 | 47.468 | 158 | 56 | 4 | 48 | 178 | 150 | 307 | 2.71e-42 | 144 |
| MsG0180004160.01.T01 | AT2G22670 | 47.468 | 158 | 56 | 4 | 48 | 178 | 167 | 324 | 2.88e-42 | 144 |
| MsG0180004160.01.T01 | AT1G52830 | 45.556 | 180 | 83 | 5 | 11 | 177 | 6 | 183 | 3.33e-42 | 140 |
| MsG0180004160.01.T01 | AT5G65670 | 50.345 | 145 | 46 | 4 | 60 | 178 | 180 | 324 | 2.49e-41 | 142 |
| MsG0180004160.01.T01 | AT5G65670 | 50.345 | 145 | 46 | 4 | 60 | 178 | 180 | 324 | 3.01e-41 | 142 |
| MsG0180004160.01.T01 | AT4G14550 | 43.590 | 195 | 62 | 8 | 11 | 157 | 1 | 195 | 5.02e-40 | 134 |
| MsG0180004160.01.T01 | AT3G23050 | 41.463 | 205 | 63 | 8 | 11 | 158 | 6 | 210 | 2.34e-38 | 130 |
| MsG0180004160.01.T01 | AT4G28640 | 39.881 | 168 | 63 | 5 | 48 | 177 | 73 | 240 | 1.78e-30 | 111 |
| MsG0180004160.01.T01 | AT4G28640 | 39.881 | 168 | 63 | 5 | 48 | 177 | 73 | 240 | 2.15e-30 | 111 |
| MsG0180004160.01.T01 | AT2G33310 | 38.587 | 184 | 64 | 6 | 44 | 178 | 47 | 230 | 2.41e-30 | 111 |
| MsG0180004160.01.T01 | AT2G33310 | 38.587 | 184 | 64 | 6 | 44 | 178 | 47 | 230 | 2.41e-30 | 111 |
| MsG0180004160.01.T01 | AT4G28640 | 39.881 | 168 | 63 | 5 | 48 | 177 | 73 | 240 | 1.22e-29 | 110 |
| MsG0180004160.01.T01 | AT2G33310 | 38.378 | 185 | 64 | 6 | 44 | 178 | 47 | 231 | 1.97e-29 | 108 |
| MsG0180004160.01.T01 | AT1G04550 | 35.754 | 179 | 74 | 4 | 40 | 178 | 46 | 223 | 4.84e-29 | 107 |
| MsG0180004160.01.T01 | AT3G16500 | 31.140 | 228 | 97 | 7 | 7 | 174 | 25 | 252 | 6.84e-27 | 102 |
| MsG0180004160.01.T01 | AT3G16500 | 31.336 | 217 | 93 | 6 | 14 | 174 | 36 | 252 | 7.02e-27 | 102 |
| MsG0180004160.01.T01 | AT5G25890 | 35.057 | 174 | 87 | 6 | 14 | 175 | 5 | 164 | 3.94e-26 | 98.6 |
| MsG0180004160.01.T01 | AT4G14550 | 42.384 | 151 | 51 | 7 | 11 | 125 | 1 | 151 | 8.06e-26 | 97.8 |
| MsG0180004160.01.T01 | AT1G51950 | 33.333 | 213 | 88 | 7 | 14 | 174 | 40 | 250 | 2.70e-25 | 98.6 |
| MsG0180004160.01.T01 | AT3G17600 | 36.232 | 138 | 74 | 3 | 42 | 171 | 23 | 154 | 2.80e-25 | 95.9 |
| MsG0180004160.01.T01 | AT3G23050 | 40.123 | 162 | 52 | 7 | 11 | 127 | 6 | 167 | 1.04e-24 | 94.7 |
| MsG0180004160.01.T01 | AT1G04100 | 38.788 | 165 | 50 | 4 | 65 | 178 | 95 | 259 | 2.87e-24 | 95.9 |
| MsG0180004160.01.T01 | AT2G46990 | 44.186 | 86 | 48 | 0 | 86 | 171 | 85 | 170 | 2.58e-20 | 83.6 |
| MsG0180004160.01.T01 | AT3G62100 | 45.349 | 86 | 47 | 0 | 86 | 171 | 83 | 168 | 2.60e-20 | 83.6 |
| MsG0180004160.01.T01 | AT1G80390 | 40.171 | 117 | 60 | 3 | 12 | 124 | 15 | 125 | 1.59e-18 | 77.4 |
| MsG0180004160.01.T01 | AT2G46990 | 45.205 | 73 | 40 | 0 | 86 | 158 | 85 | 157 | 3.09e-15 | 69.7 |
| MsG0180004160.01.T01 | AT3G62100 | 45.205 | 73 | 40 | 0 | 86 | 158 | 83 | 155 | 1.03e-14 | 68.2 |
| MsG0180004160.01.T01 | AT4G32280 | 34.884 | 86 | 51 | 2 | 86 | 171 | 118 | 198 | 2.98e-13 | 65.5 |
| MsG0180004160.01.T01 | AT4G32280 | 34.884 | 86 | 51 | 2 | 86 | 171 | 160 | 240 | 8.88e-13 | 64.7 |
| MsG0180004160.01.T01 | AT2G01200 | 38.614 | 101 | 59 | 2 | 76 | 175 | 89 | 187 | 1.70e-11 | 60.5 |
| MsG0180004160.01.T01 | AT2G01200 | 38.614 | 101 | 59 | 2 | 76 | 175 | 89 | 187 | 1.70e-11 | 60.5 |
| MsG0180004160.01.T01 | AT1G15050 | 37.778 | 90 | 53 | 2 | 87 | 175 | 62 | 149 | 6.20e-11 | 58.2 |
Find 55 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCAACATTAATTAATTTC+TGG | 0.174082 | 1:+74227866 | MsG0180004160.01.T01:three_prime_UTR |
| TTACAAGAGGCTGAGGCTTC+TGG | 0.222165 | 1:+74227238 | MsG0180004160.01.T01:CDS |
| AACCTTTCTGCTTGTGTTAT+CGG | 0.235448 | 1:+74227720 | MsG0180004160.01.T01:three_prime_UTR |
| TTCTTCCTGTAAGATCTTAT+TGG | 0.258525 | 1:-74227211 | None:intergenic |
| AAGATTGATTTGAGGGTCTA+TGG | 0.290855 | 1:+74227304 | MsG0180004160.01.T01:CDS |
| TGCACAACTTCTTAAAGCTT+TGG | 0.324497 | 1:+74227333 | MsG0180004160.01.T01:CDS |
| TCCTTTGAAGTTTCAGTCAA+TGG | 0.340316 | 1:-74227016 | None:intergenic |
| CTATCTGAAGTTGTGCTCTA+AGG | 0.354793 | 1:+74227807 | MsG0180004160.01.T01:three_prime_UTR |
| CTTCTGAATTATTTGAAAGA+TGG | 0.355127 | 1:+74226880 | MsG0180004160.01.T01:exon |
| TAAATTTCTTTGTTATTGAA+TGG | 0.358362 | 1:+74228105 | MsG0180004160.01.T01:three_prime_UTR |
| GAATGAAAAGTGAAGTGTTT+TGG | 0.375005 | 1:+74227677 | MsG0180004160.01.T01:three_prime_UTR |
| TATGTGAAAGTGAGTTTAGA+TGG | 0.375233 | 1:+74227265 | MsG0180004160.01.T01:CDS |
| CCTTAGGAAGATTGATTTGA+GGG | 0.380707 | 1:+74227297 | MsG0180004160.01.T01:CDS |
| GAGCTAAGATTAGGACTTCC+AGG | 0.382329 | 1:+74226947 | MsG0180004160.01.T01:CDS |
| ACTTGCAGGGCTAAGATAGT+AGG | 0.383062 | 1:+74227181 | MsG0180004160.01.T01:intron |
| TACAAGAGGCTGAGGCTTCT+GGG | 0.384427 | 1:+74227239 | MsG0180004160.01.T01:CDS |
| CCATCTTTATCTTCATATGT+AGG | 0.415484 | 1:-74227424 | None:intergenic |
| TTCTGGTTACTTTAGCATCT+AGG | 0.421644 | 1:+74227883 | MsG0180004160.01.T01:three_prime_UTR |
| GGCCACCAATAAGATCTTAC+AGG | 0.438714 | 1:+74227206 | MsG0180004160.01.T01:CDS |
| CTTAGAGCACAACTTCAGAT+AGG | 0.438793 | 1:-74227806 | None:intergenic |
| GATGGTGATTGGATGTTAGT+TGG | 0.443053 | 1:+74227442 | MsG0180004160.01.T01:CDS |
| TAGATGGAGCTCCTTACCTT+AGG | 0.462831 | 1:+74227281 | MsG0180004160.01.T01:CDS |
| TTCCTGTAAGATCTTATTGG+TGG | 0.463988 | 1:-74227208 | None:intergenic |
| TCAAATGAAAGAGATAGAAA+AGG | 0.479155 | 1:+74227998 | MsG0180004160.01.T01:three_prime_UTR |
| ATGAAGATAAAGATGGTGAT+TGG | 0.480229 | 1:+74227431 | MsG0180004160.01.T01:CDS |
| TATCGGAAGAACTAAACAAA+TGG | 0.489024 | 1:+74227737 | MsG0180004160.01.T01:three_prime_UTR |
| ACCTTAGGAAGATTGATTTG+AGG | 0.502641 | 1:+74227296 | MsG0180004160.01.T01:CDS |
| AAGGCTACTGAGCTAAGATT+AGG | 0.511132 | 1:+74226938 | MsG0180004160.01.T01:CDS |
| CAAATGAAAGAGATAGAAAA+GGG | 0.511488 | 1:+74227999 | MsG0180004160.01.T01:three_prime_UTR |
| AAATCAATCTTCCTAAGGTA+AGG | 0.513222 | 1:-74227292 | None:intergenic |
| CTGAAGTTGTGCTCTAAGGA+AGG | 0.514838 | 1:+74227811 | MsG0180004160.01.T01:three_prime_UTR |
| CCCTCAAATCAATCTTCCTA+AGG | 0.515293 | 1:-74227297 | None:intergenic |
| TTCCGATAACACAAGCAGAA+AGG | 0.522135 | 1:-74227722 | None:intergenic |
| CCAGAAATTAATTAATGTTG+AGG | 0.525082 | 1:-74227866 | None:intergenic |
| TGTGCTCTAAGGAAGGGAAA+TGG | 0.525813 | 1:+74227818 | MsG0180004160.01.T01:three_prime_UTR |
| TGAAGTTGTGCTCTAAGGAA+GGG | 0.550378 | 1:+74227812 | MsG0180004160.01.T01:three_prime_UTR |
| CTTGCAGGGCTAAGATAGTA+GGG | 0.554533 | 1:+74227182 | MsG0180004160.01.T01:intron |
| GAACAGTTTACAAGAGGCTG+AGG | 0.558668 | 1:+74227231 | MsG0180004160.01.T01:CDS |
| ATATATGATGATAAAGGAGA+AGG | 0.564955 | 1:-74226766 | None:intergenic |
| TGTTAGTTGGAGATGTTCCA+TGG | 0.566837 | 1:+74227455 | MsG0180004160.01.T01:CDS |
| CCTACATATGAAGATAAAGA+TGG | 0.572828 | 1:+74227424 | MsG0180004160.01.T01:CDS |
| ACCATTGACTGAAACTTCAA+AGG | 0.585923 | 1:+74227015 | MsG0180004160.01.T01:CDS |
| AAAGATTATCATAACTTACA+AGG | 0.586121 | 1:+74226844 | MsG0180004160.01.T01:five_prime_UTR |
| TGAGAATGATCTCAACATGA+AGG | 0.586923 | 1:+74226919 | MsG0180004160.01.T01:CDS |
| GATGTTAAAGAGATGTGAGA+TGG | 0.591561 | 1:-74226817 | None:intergenic |
| ATTGATTTGAGGGTCTATGG+TGG | 0.593128 | 1:+74227307 | MsG0180004160.01.T01:CDS |
| CAGGAAGAACAGTTTACAAG+AGG | 0.599653 | 1:+74227225 | MsG0180004160.01.T01:CDS |
| GTTAGTTGGAGATGTTCCAT+GGG | 0.617620 | 1:+74227456 | MsG0180004160.01.T01:CDS |
| ATGGAAATACAAGTATGCAA+AGG | 0.631719 | 1:-74226798 | None:intergenic |
| AGCATGTTCAAGTTAACCAT+AGG | 0.640019 | 1:+74227358 | MsG0180004160.01.T01:CDS |
| AAAAGACTAAGAATCATGAA+AGG | 0.648151 | 1:+74227610 | MsG0180004160.01.T01:CDS |
| AGCTAAGATTAGGACTTCCA+GGG | 0.649383 | 1:+74226948 | MsG0180004160.01.T01:CDS |
| ATGAAAGGAACAGAAGCTAG+AGG | 0.651214 | 1:+74227625 | MsG0180004160.01.T01:CDS |
| ACTGAAACTTCAAAGGACAG+TGG | 0.678691 | 1:+74227022 | MsG0180004160.01.T01:CDS |
| GCAGGGCTAAGATAGTAGGG+TGG | 0.770265 | 1:+74227185 | MsG0180004160.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATATATGATGATAA+AGG | - | Chr1:74226775-74226794 | None:intergenic | 10.0% |
| !! | AAGAAAAAAAAAAAAATCAG+TGG | - | Chr1:74227940-74227959 | None:intergenic | 15.0% |
| !!! | TAAATTTCTTTGTTATTGAA+TGG | + | Chr1:74228105-74228124 | MsG0180004160.01.T01:three_prime_UTR | 15.0% |
| !! | AAAGATTATCATAACTTACA+AGG | + | Chr1:74226844-74226863 | MsG0180004160.01.T01:five_prime_UTR | 20.0% |
| !!! | TTTTCTTTCTACCTTATAAA+GGG | + | Chr1:74227119-74227138 | MsG0180004160.01.T01:intron | 20.0% |
| !!! | TTTTTCTTTCTACCTTATAA+AGG | + | Chr1:74227118-74227137 | MsG0180004160.01.T01:intron | 20.0% |
| ! | AAAAGACTAAGAATCATGAA+AGG | + | Chr1:74227610-74227629 | MsG0180004160.01.T01:CDS | 25.0% |
| ! | ATATATGATGATAAAGGAGA+AGG | - | Chr1:74226769-74226788 | None:intergenic | 25.0% |
| ! | CAAATGAAAGAGATAGAAAA+GGG | + | Chr1:74227999-74228018 | MsG0180004160.01.T01:three_prime_UTR | 25.0% |
| ! | CATCAATACAAGAAAAAACT+TGG | - | Chr1:74228050-74228069 | None:intergenic | 25.0% |
| ! | CCAGAAATTAATTAATGTTG+AGG | - | Chr1:74227869-74227888 | None:intergenic | 25.0% |
| ! | CCTCAACATTAATTAATTTC+TGG | + | Chr1:74227866-74227885 | MsG0180004160.01.T01:three_prime_UTR | 25.0% |
| ! | CTTCTGAATTATTTGAAAGA+TGG | + | Chr1:74226880-74226899 | MsG0180004160.01.T01:exon | 25.0% |
| ! | GCATATATAGAGAGAAAAAA+AGG | - | Chr1:74227489-74227508 | None:intergenic | 25.0% |
| ! | TCAAATGAAAGAGATAGAAA+AGG | + | Chr1:74227998-74228017 | MsG0180004160.01.T01:three_prime_UTR | 25.0% |
| ! | TCTGAAAAAGAAGGTTATAA+AGG | + | Chr1:74227388-74227407 | MsG0180004160.01.T01:CDS | 25.0% |
| !! | ATCTTTTGAACTTACTTTGA+AGG | - | Chr1:74227076-74227095 | None:intergenic | 25.0% |
| !!! | AGAATATTTTTTTGACTTGC+AGG | + | Chr1:74227167-74227186 | MsG0180004160.01.T01:intron | 25.0% |
| !!! | GAATATTTTTTTGACTTGCA+GGG | + | Chr1:74227168-74227187 | MsG0180004160.01.T01:intron | 25.0% |
| !!! | TTTTTCAGAATAATCACCTA+TGG | - | Chr1:74227377-74227396 | None:intergenic | 25.0% |
| AAATCAATCTTCCTAAGGTA+AGG | - | Chr1:74227295-74227314 | None:intergenic | 30.0% | |
| ATGAAGATAAAGATGGTGAT+TGG | + | Chr1:74227431-74227450 | MsG0180004160.01.T01:CDS | 30.0% | |
| ATGGAAATACAAGTATGCAA+AGG | - | Chr1:74226801-74226820 | None:intergenic | 30.0% | |
| CCATCTTTATCTTCATATGT+AGG | - | Chr1:74227427-74227446 | None:intergenic | 30.0% | |
| CCTACATATGAAGATAAAGA+TGG | + | Chr1:74227424-74227443 | MsG0180004160.01.T01:CDS | 30.0% | |
| TATCGGAAGAACTAAACAAA+TGG | + | Chr1:74227737-74227756 | MsG0180004160.01.T01:three_prime_UTR | 30.0% | |
| TATGTGAAAGTGAGTTTAGA+TGG | + | Chr1:74227265-74227284 | MsG0180004160.01.T01:CDS | 30.0% | |
| TTCTTCCTGTAAGATCTTAT+TGG | - | Chr1:74227214-74227233 | None:intergenic | 30.0% | |
| ! | GGTGATTATTCTGAAAAAGA+AGG | + | Chr1:74227379-74227398 | MsG0180004160.01.T01:CDS | 30.0% |
| !! | GAATGAAAAGTGAAGTGTTT+TGG | + | Chr1:74227677-74227696 | MsG0180004160.01.T01:three_prime_UTR | 30.0% |
| !! | TTTTGAACTTACTTTGAAGG+AGG | - | Chr1:74227073-74227092 | None:intergenic | 30.0% |
| AAAAAAAGGACTTACTCCCA+TGG | - | Chr1:74227475-74227494 | None:intergenic | 35.0% | |
| AACCTTTCTGCTTGTGTTAT+CGG | + | Chr1:74227720-74227739 | MsG0180004160.01.T01:three_prime_UTR | 35.0% | |
| ACATCATGCAACCCTTTATA+AGG | - | Chr1:74227133-74227152 | None:intergenic | 35.0% | |
| GATGTTAAAGAGATGTGAGA+TGG | - | Chr1:74226820-74226839 | None:intergenic | 35.0% | |
| TGAGAATGATCTCAACATGA+AGG | + | Chr1:74226919-74226938 | MsG0180004160.01.T01:CDS | 35.0% | |
| TGCACAACTTCTTAAAGCTT+TGG | + | Chr1:74227333-74227352 | MsG0180004160.01.T01:CDS | 35.0% | |
| TTCCTGTAAGATCTTATTGG+TGG | - | Chr1:74227211-74227230 | None:intergenic | 35.0% | |
| ! | ACCATTGACTGAAACTTCAA+AGG | + | Chr1:74227015-74227034 | MsG0180004160.01.T01:CDS | 35.0% |
| ! | AGCATGTTCAAGTTAACCAT+AGG | + | Chr1:74227358-74227377 | MsG0180004160.01.T01:CDS | 35.0% |
| ! | TTCAGTCAATGGTCTTTTGT+TGG | - | Chr1:74227008-74227027 | None:intergenic | 35.0% |
| ! | TTCTGGTTACTTTAGCATCT+AGG | + | Chr1:74227883-74227902 | MsG0180004160.01.T01:three_prime_UTR | 35.0% |
| !! | AAGATTGATTTGAGGGTCTA+TGG | + | Chr1:74227304-74227323 | MsG0180004160.01.T01:CDS | 35.0% |
| !! | ACCTTAGGAAGATTGATTTG+AGG | + | Chr1:74227296-74227315 | MsG0180004160.01.T01:CDS | 35.0% |
| !! | CCTTAGGAAGATTGATTTGA+GGG | + | Chr1:74227297-74227316 | MsG0180004160.01.T01:CDS | 35.0% |
| !! | TCCTTTGAAGTTTCAGTCAA+TGG | - | Chr1:74227019-74227038 | None:intergenic | 35.0% |
| AAGGCTACTGAGCTAAGATT+AGG | + | Chr1:74226938-74226957 | MsG0180004160.01.T01:CDS | 40.0% | |
| ACTGAAACTTCAAAGGACAG+TGG | + | Chr1:74227022-74227041 | MsG0180004160.01.T01:CDS | 40.0% | |
| AGCTAAGATTAGGACTTCCA+GGG | + | Chr1:74226948-74226967 | MsG0180004160.01.T01:CDS | 40.0% | |
| ATGAAAGGAACAGAAGCTAG+AGG | + | Chr1:74227625-74227644 | MsG0180004160.01.T01:CDS | 40.0% | |
| CAGGAAGAACAGTTTACAAG+AGG | + | Chr1:74227225-74227244 | MsG0180004160.01.T01:CDS | 40.0% | |
| CCCTCAAATCAATCTTCCTA+AGG | - | Chr1:74227300-74227319 | None:intergenic | 40.0% | |
| CTTAGAGCACAACTTCAGAT+AGG | - | Chr1:74227809-74227828 | None:intergenic | 40.0% | |
| GATGGTGATTGGATGTTAGT+TGG | + | Chr1:74227442-74227461 | MsG0180004160.01.T01:CDS | 40.0% | |
| GTTAGTTGGAGATGTTCCAT+GGG | + | Chr1:74227456-74227475 | MsG0180004160.01.T01:CDS | 40.0% | |
| TGTTAGTTGGAGATGTTCCA+TGG | + | Chr1:74227455-74227474 | MsG0180004160.01.T01:CDS | 40.0% | |
| TTCCGATAACACAAGCAGAA+AGG | - | Chr1:74227725-74227744 | None:intergenic | 40.0% | |
| ! | CTATCTGAAGTTGTGCTCTA+AGG | + | Chr1:74227807-74227826 | MsG0180004160.01.T01:three_prime_UTR | 40.0% |
| ! | TCTTCATTTTGTTCTGTCCC+TGG | - | Chr1:74226968-74226987 | None:intergenic | 40.0% |
| !! | ATTGATTTGAGGGTCTATGG+TGG | + | Chr1:74227307-74227326 | MsG0180004160.01.T01:CDS | 40.0% |
| !! | TGAAGTTGTGCTCTAAGGAA+GGG | + | Chr1:74227812-74227831 | MsG0180004160.01.T01:three_prime_UTR | 40.0% |
| !!! | AGTGAAGTGTTTTGGTGTGA+AGG | + | Chr1:74227685-74227704 | MsG0180004160.01.T01:three_prime_UTR | 40.0% |
| !!! | GTGAAGTGTTTTGGTGTGAA+GGG | + | Chr1:74227686-74227705 | MsG0180004160.01.T01:three_prime_UTR | 40.0% |
| ACTTGCAGGGCTAAGATAGT+AGG | + | Chr1:74227181-74227200 | MsG0180004160.01.T01:intron | 45.0% | |
| CTTGCAGGGCTAAGATAGTA+GGG | + | Chr1:74227182-74227201 | MsG0180004160.01.T01:intron | 45.0% | |
| GAACAGTTTACAAGAGGCTG+AGG | + | Chr1:74227231-74227250 | MsG0180004160.01.T01:CDS | 45.0% | |
| GAGCTAAGATTAGGACTTCC+AGG | + | Chr1:74226947-74226966 | MsG0180004160.01.T01:CDS | 45.0% | |
| GGCCACCAATAAGATCTTAC+AGG | + | Chr1:74227206-74227225 | MsG0180004160.01.T01:CDS | 45.0% | |
| TAGATGGAGCTCCTTACCTT+AGG | + | Chr1:74227281-74227300 | MsG0180004160.01.T01:CDS | 45.0% | |
| !! | CTGAAGTTGTGCTCTAAGGA+AGG | + | Chr1:74227811-74227830 | MsG0180004160.01.T01:three_prime_UTR | 45.0% |
| !! | TGTGCTCTAAGGAAGGGAAA+TGG | + | Chr1:74227818-74227837 | MsG0180004160.01.T01:three_prime_UTR | 45.0% |
| TACAAGAGGCTGAGGCTTCT+GGG | + | Chr1:74227239-74227258 | MsG0180004160.01.T01:CDS | 50.0% | |
| TTACAAGAGGCTGAGGCTTC+TGG | + | Chr1:74227238-74227257 | MsG0180004160.01.T01:CDS | 50.0% | |
| GCAGGGCTAAGATAGTAGGG+TGG | + | Chr1:74227185-74227204 | MsG0180004160.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 74226763 | 74228141 | 74226763 | ID=MsG0180004160.01;Name=MsG0180004160.01 |
| Chr1 | mRNA | 74226763 | 74228141 | 74226763 | ID=MsG0180004160.01.T01;Parent=MsG0180004160.01;Name=MsG0180004160.01.T01;_AED=0.10;_eAED=0.10;_QI=136|1|1|1|1|1|3|487|178 |
| Chr1 | exon | 74226763 | 74227080 | 74226763 | ID=MsG0180004160.01.T01:exon:31532;Parent=MsG0180004160.01.T01 |
| Chr1 | exon | 74227189 | 74227479 | 74227189 | ID=MsG0180004160.01.T01:exon:31533;Parent=MsG0180004160.01.T01 |
| Chr1 | exon | 74227591 | 74228141 | 74227591 | ID=MsG0180004160.01.T01:exon:31534;Parent=MsG0180004160.01.T01 |
| Chr1 | five_prime_UTR | 74226763 | 74226898 | 74226763 | ID=MsG0180004160.01.T01:five_prime_utr;Parent=MsG0180004160.01.T01 |
| Chr1 | CDS | 74226899 | 74227080 | 74226899 | ID=MsG0180004160.01.T01:cds;Parent=MsG0180004160.01.T01 |
| Chr1 | CDS | 74227189 | 74227479 | 74227189 | ID=MsG0180004160.01.T01:cds;Parent=MsG0180004160.01.T01 |
| Chr1 | CDS | 74227591 | 74227654 | 74227591 | ID=MsG0180004160.01.T01:cds;Parent=MsG0180004160.01.T01 |
| Chr1 | three_prime_UTR | 74227655 | 74228141 | 74227655 | ID=MsG0180004160.01.T01:three_prime_utr;Parent=MsG0180004160.01.T01 |
| Gene Sequence |
| Protein sequence |
