Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016985.01.T01 | XP_003602759.1 | 97.196 | 107 | 3 | 0 | 1 | 107 | 431 | 537 | 2.91E-66 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016985.01.T01 | G7J3A9 | 97.196 | 107 | 3 | 0 | 1 | 107 | 431 | 537 | 1.39e-66 | 219 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0380016985.01 | 0.864993 | 8.151556e-65 | 2.610662e-61 |
| MsG0080048058.01 | MsG0380016985.01 | 0.868125 | 8.233689e-66 | 2.945411e-62 |
| MsG0080048218.01 | MsG0380016985.01 | 0.812801 | 3.531493e-51 | 2.266763e-48 |
| MsG0080048383.01 | MsG0380016985.01 | 0.831609 | 1.515297e-55 | 1.652800e-52 |
| MsG0080048461.01 | MsG0380016985.01 | 0.810443 | 1.149794e-50 | 6.931605e-48 |
| MsG0080048687.01 | MsG0380016985.01 | 0.831061 | 2.066733e-55 | 2.217837e-52 |
| MsG0180000001.01 | MsG0380016985.01 | 0.886166 | 4.333465e-72 | 3.061583e-68 |
| MsG0180000023.01 | MsG0380016985.01 | 0.807040 | 6.138973e-50 | 3.384071e-47 |
| MsG0180000101.01 | MsG0380016985.01 | 0.808981 | 2.370859e-50 | 1.375082e-47 |
| MsG0180000144.01 | MsG0380016985.01 | 0.841312 | 5.129896e-58 | 7.507259e-55 |
| MsG0180000155.01 | MsG0380016985.01 | 0.808270 | 3.362869e-50 | 1.914450e-47 |
| MsG0180000195.01 | MsG0380016985.01 | 0.818742 | 1.672086e-52 | 1.262155e-49 |
| MsG0180000197.01 | MsG0380016985.01 | 0.860345 | 2.203651e-63 | 6.004251e-60 |
| MsG0180000235.01 | MsG0380016985.01 | 0.826569 | 2.525026e-54 | 2.376770e-51 |
| MsG0180000295.01 | MsG0380016985.01 | 0.827113 | 1.871798e-54 | 1.789906e-51 |
| MsG0180000334.01 | MsG0380016985.01 | 0.812843 | 3.457844e-51 | 2.221968e-48 |
| MsG0180000364.01 | MsG0380016985.01 | 0.804737 | 1.871007e-49 | 9.722530e-47 |
| MsG0180000555.01 | MsG0380016985.01 | 0.806294 | 8.820775e-50 | 4.770152e-47 |
| MsG0180000585.01 | MsG0380016985.01 | 0.800467 | 1.421834e-48 | 6.625110e-46 |
| MsG0180000821.01 | MsG0380016985.01 | 0.826085 | 3.292358e-54 | 3.056630e-51 |
| MsG0180000822.01 | MsG0380016985.01 | 0.801813 | 7.542306e-49 | 3.636292e-46 |
| MsG0180001117.01 | MsG0380016985.01 | 0.838864 | 2.231481e-57 | 3.027946e-54 |
| MsG0180001173.01 | MsG0380016985.01 | 0.836170 | 1.094768e-56 | 1.368692e-53 |
| MsG0180001237.01 | MsG0380016985.01 | 0.848687 | 5.227979e-60 | 9.672243e-57 |
| MsG0180001260.01 | MsG0380016985.01 | 0.808564 | 2.911007e-50 | 1.669908e-47 |
| MsG0180001294.01 | MsG0380016985.01 | 0.868265 | 7.422715e-66 | 2.668433e-62 |
| MsG0180001566.01 | MsG0380016985.01 | 0.832073 | 1.163537e-55 | 1.286588e-52 |
| MsG0180001599.01 | MsG0380016985.01 | 0.828264 | 9.901319e-55 | 9.791220e-52 |
| MsG0180002075.01 | MsG0380016985.01 | 0.804809 | 1.807389e-49 | 9.409286e-47 |
| MsG0180002283.01 | MsG0380016985.01 | 0.800872 | 1.175197e-48 | 5.532846e-46 |
| MsG0180003031.01 | MsG0380016985.01 | 0.830834 | 2.349180e-55 | 2.504104e-52 |
| MsG0180003190.01 | MsG0380016985.01 | 0.806056 | 9.899815e-50 | 5.321379e-47 |
| MsG0180003303.01 | MsG0380016985.01 | 0.840004 | 1.128513e-57 | 1.586233e-54 |
| MsG0180003337.01 | MsG0380016985.01 | 0.816053 | 6.742700e-52 | 4.728031e-49 |
| MsG0180003444.01 | MsG0380016985.01 | 0.823296 | 1.495064e-53 | 1.282130e-50 |
| MsG0180003572.01 | MsG0380016985.01 | 0.801530 | 8.622916e-49 | 4.127507e-46 |
| MsG0180003586.01 | MsG0380016985.01 | 0.836556 | 8.733466e-57 | 1.104446e-53 |
| MsG0180003744.01 | MsG0380016985.01 | 0.854449 | 1.221779e-61 | 2.729433e-58 |
| MsG0180003822.01 | MsG0380016985.01 | 0.806085 | 9.761991e-50 | 5.251119e-47 |
| MsG0180003860.01 | MsG0380016985.01 | 0.828574 | 8.334977e-55 | 8.317635e-52 |
| MsG0180003977.01 | MsG0380016985.01 | 0.802504 | 5.437750e-49 | 2.668142e-46 |
| MsG0180003984.01 | MsG0380016985.01 | 0.807424 | 5.089139e-50 | 2.833569e-47 |
| MsG0180004050.01 | MsG0380016985.01 | 0.858180 | 9.830294e-63 | 2.487301e-59 |
| MsG0180004056.01 | MsG0380016985.01 | 0.811512 | 6.747474e-51 | 4.185040e-48 |
| MsG0180004160.01 | MsG0380016985.01 | 0.814029 | 1.897263e-51 | 1.258995e-48 |
| MsG0180004598.01 | MsG0380016985.01 | 0.830955 | 2.194099e-55 | 2.347076e-52 |
| MsG0180004645.01 | MsG0380016985.01 | 0.841365 | 4.967196e-58 | 7.282137e-55 |
| MsG0180004730.01 | MsG0380016985.01 | 0.816035 | 6.804120e-52 | 4.768654e-49 |
| MsG0180004754.01 | MsG0380016985.01 | 0.805415 | 1.349530e-49 | 7.135551e-47 |
| MsG0180004767.01 | MsG0380016985.01 | 0.824570 | 7.516128e-54 | 6.683283e-51 |
| MsG0180004989.01 | MsG0380016985.01 | 0.814327 | 1.630090e-51 | 1.090508e-48 |
| MsG0180004991.01 | MsG0380016985.01 | 0.902435 | 9.720369e-79 | 1.376216e-74 |
| MsG0180005049.01 | MsG0380016985.01 | 0.875246 | 3.584334e-68 | 1.662150e-64 |
| MsG0180005125.01 | MsG0380016985.01 | 0.849433 | 3.243791e-60 | 6.148183e-57 |
| MsG0180005443.01 | MsG0380016985.01 | 0.864461 | 1.195749e-64 | 3.757647e-61 |
| MsG0180005445.01 | MsG0380016985.01 | 0.804305 | 2.302956e-49 | 1.183344e-46 |
| MsG0180005451.01 | MsG0380016985.01 | 0.867095 | 1.761167e-65 | 6.073975e-62 |
| MsG0180005493.01 | MsG0380016985.01 | 0.886211 | 4.167208e-72 | 2.949333e-68 |
| MsG0180005664.01 | MsG0380016985.01 | 0.813231 | 2.841844e-51 | 1.845292e-48 |
| MsG0180005765.01 | MsG0380016985.01 | 0.855774 | 5.032957e-62 | 1.175077e-58 |
| MsG0180005944.01 | MsG0380016985.01 | 0.816660 | 4.931648e-52 | 3.515840e-49 |
| MsG0180005949.01 | MsG0380016985.01 | 0.843762 | 1.148107e-58 | 1.814590e-55 |
| MsG0180006023.01 | MsG0380016985.01 | 0.836101 | 1.140032e-56 | 1.422271e-53 |
| MsG0180006098.01 | MsG0380016985.01 | 0.800234 | 1.585982e-48 | 7.346544e-46 |
| MsG0180006235.01 | MsG0380016985.01 | 0.855918 | 4.569336e-62 | 1.071909e-58 |
| MsG0280006305.01 | MsG0380016985.01 | 0.845895 | 3.053308e-59 | 5.164479e-56 |
| MsG0280006367.01 | MsG0380016985.01 | 0.813677 | 2.268249e-51 | 1.490915e-48 |
| MsG0280006368.01 | MsG0380016985.01 | 0.834679 | 2.606822e-56 | 3.115675e-53 |
| MsG0280006422.01 | MsG0380016985.01 | 0.807283 | 5.451992e-50 | 3.024548e-47 |
| MsG0280010614.01 | MsG0380016985.01 | 0.801451 | 8.950339e-49 | 4.275752e-46 |
| MsG0280010632.01 | MsG0380016985.01 | 0.816588 | 5.117113e-52 | 3.640822e-49 |
| MsG0280010735.01 | MsG0380016985.01 | 0.813549 | 2.420164e-51 | 1.585281e-48 |
| MsG0280011014.01 | MsG0380016985.01 | 0.820255 | 7.554232e-53 | 5.947077e-50 |
| MsG0280011037.01 | MsG0380016985.01 | 0.802984 | 4.328659e-49 | 2.149970e-46 |
| MsG0280011070.01 | MsG0380016985.01 | 0.805445 | 1.330678e-49 | 7.041168e-47 |
| MsG0280011105.01 | MsG0380016985.01 | 0.801917 | 7.181519e-49 | 3.471474e-46 |
| MsG0280011293.01 | MsG0380016985.01 | 0.804867 | 1.757818e-49 | 9.165095e-47 |
| MsG0280011336.01 | MsG0380016985.01 | 0.804650 | 1.950829e-49 | 1.011379e-46 |
| MsG0280011388.01 | MsG0380016985.01 | 0.814580 | 1.432897e-51 | 9.651710e-49 |
| MsG0380011729.01 | MsG0380016985.01 | 0.831673 | 1.461044e-55 | 1.596647e-52 |
| MsG0380012020.01 | MsG0380016985.01 | 0.809060 | 2.280795e-50 | 1.325638e-47 |
| MsG0380012057.01 | MsG0380016985.01 | 0.822389 | 2.431949e-53 | 2.032841e-50 |
| MsG0380012073.01 | MsG0380016985.01 | 0.803345 | 3.643748e-49 | 1.826632e-46 |
| MsG0380012124.01 | MsG0380016985.01 | 0.812600 | 3.907382e-51 | 2.494978e-48 |
| MsG0380012458.01 | MsG0380016985.01 | 0.810210 | 1.290593e-50 | 7.732693e-48 |
| MsG0380012471.01 | MsG0380016985.01 | 0.821128 | 4.759855e-53 | 3.839276e-50 |
| MsG0380013579.01 | MsG0380016985.01 | 0.804999 | 1.649893e-49 | 8.630817e-47 |
| MsG0380013641.01 | MsG0380016985.01 | 0.817598 | 3.034132e-52 | 2.219314e-49 |
| MsG0380014118.01 | MsG0380016985.01 | 0.807787 | 4.261228e-50 | 2.395092e-47 |
| MsG0380014330.01 | MsG0380016985.01 | 0.804359 | 2.243343e-49 | 1.154342e-46 |
| MsG0380014365.01 | MsG0380016985.01 | 0.825529 | 4.459507e-54 | 4.075287e-51 |
| MsG0380014489.01 | MsG0380016985.01 | 0.853731 | 1.968315e-61 | 4.294638e-58 |
| MsG0380014539.01 | MsG0380016985.01 | 0.841429 | 4.777475e-58 | 7.018392e-55 |
| MsG0380014541.01 | MsG0380016985.01 | 0.854119 | 1.521686e-61 | 3.363529e-58 |
| MsG0380014908.01 | MsG0380016985.01 | 0.820356 | 7.163600e-53 | 5.655243e-50 |
| MsG0380015512.01 | MsG0380016985.01 | 0.804210 | 2.410242e-49 | 1.235416e-46 |
| MsG0380015564.01 | MsG0380016985.01 | 0.827254 | 1.731727e-54 | 1.662948e-51 |
| MsG0380015607.01 | MsG0380016985.01 | 0.829044 | 6.415323e-55 | 6.489740e-52 |
| MsG0380015702.01 | MsG0380016985.01 | 0.814138 | 1.794504e-51 | 1.194359e-48 |
| MsG0380015793.01 | MsG0380016985.01 | -0.835362 | 1.753379e-56 | 2.139463e-53 |
| MsG0380015831.01 | MsG0380016985.01 | 0.878592 | 2.478836e-69 | 1.301849e-65 |
| MsG0380016131.01 | MsG0380016985.01 | 0.821450 | 4.012395e-53 | 3.265323e-50 |
| MsG0380016132.01 | MsG0380016985.01 | 0.841798 | 3.817833e-58 | 5.672720e-55 |
| MsG0380016227.01 | MsG0380016985.01 | 0.845223 | 4.642639e-59 | 7.683584e-56 |
| MsG0380016389.01 | MsG0380016985.01 | 0.851164 | 1.060736e-60 | 2.127919e-57 |
| MsG0380016483.01 | MsG0380016985.01 | 0.817550 | 3.111057e-52 | 2.272613e-49 |
| MsG0380016513.01 | MsG0380016985.01 | 0.848060 | 7.795397e-60 | 1.413037e-56 |
| MsG0380016752.01 | MsG0380016985.01 | 0.809515 | 1.821389e-50 | 1.071581e-47 |
| MsG0380016765.01 | MsG0380016985.01 | 0.802918 | 4.466760e-49 | 2.214975e-46 |
| MsG0380016882.01 | MsG0380016985.01 | 0.806042 | 9.966675e-50 | 5.355349e-47 |
| MsG0380016971.01 | MsG0380016985.01 | 0.834438 | 2.997439e-56 | 3.557206e-53 |
| MsG0380016985.01 | MsG0380017195.01 | 0.803392 | 3.563634e-49 | 1.788668e-46 |
| MsG0380016985.01 | MsG0380017232.01 | 0.812067 | 5.109122e-51 | 3.215934e-48 |
| MsG0380016985.01 | MsG0380017375.01 | 0.807866 | 4.099638e-50 | 2.308952e-47 |
| MsG0380016985.01 | MsG0380017410.01 | 0.801873 | 7.332847e-49 | 3.540813e-46 |
| MsG0380016985.01 | MsG0380017431.01 | 0.846862 | 1.663221e-59 | 2.902082e-56 |
| MsG0380016985.01 | MsG0380017604.01 | 0.826486 | 2.642944e-54 | 2.481841e-51 |
| MsG0380016985.01 | MsG0380017631.01 | 0.805439 | 1.334362e-49 | 7.059607e-47 |
| MsG0380016985.01 | MsG0380017719.01 | 0.859758 | 3.314630e-63 | 8.851175e-60 |
| MsG0380016985.01 | MsG0380017797.01 | 0.812062 | 5.122206e-51 | 3.223687e-48 |
| MsG0380016985.01 | MsG0380017836.01 | 0.804606 | 1.992596e-49 | 1.031842e-46 |
| MsG0380016985.01 | MsG0380017998.01 | 0.826446 | 2.700193e-54 | 2.532931e-51 |
| MsG0380016985.01 | MsG0380018001.01 | 0.811629 | 6.363227e-51 | 3.958551e-48 |
| MsG0380016985.01 | MsG0480018230.01 | 0.812234 | 4.697529e-51 | 2.970529e-48 |
| MsG0380016985.01 | MsG0480018235.01 | 0.821745 | 3.428414e-53 | 2.813311e-50 |
| MsG0380016985.01 | MsG0480018256.01 | 0.807322 | 5.349076e-50 | 2.970472e-47 |
| MsG0380016985.01 | MsG0480018289.01 | 0.810541 | 1.095371e-50 | 6.620563e-48 |
| MsG0380016985.01 | MsG0480018462.01 | 0.843411 | 1.425022e-58 | 2.227813e-55 |
| MsG0380016985.01 | MsG0480018477.01 | 0.819343 | 1.220683e-52 | 9.367674e-50 |
| MsG0380016985.01 | MsG0480018479.01 | 0.816310 | 5.906695e-52 | 4.171047e-49 |
| MsG0380016985.01 | MsG0480018641.01 | 0.826401 | 2.768215e-54 | 2.593400e-51 |
| MsG0380016985.01 | MsG0480018846.01 | 0.882743 | 8.065086e-71 | 4.972220e-67 |
| MsG0380016985.01 | MsG0480018894.01 | 0.824619 | 7.318543e-54 | 6.517250e-51 |
| MsG0380016985.01 | MsG0480019170.01 | 0.827744 | 1.321042e-54 | 1.286698e-51 |
| MsG0380016985.01 | MsG0480019404.01 | 0.803044 | 4.205827e-49 | 2.092205e-46 |
| MsG0380016985.01 | MsG0480020065.01 | 0.813837 | 2.090933e-51 | 1.380289e-48 |
| MsG0380016985.01 | MsG0480020242.01 | 0.867175 | 1.661232e-65 | 5.745170e-62 |
| MsG0380016985.01 | MsG0480020331.01 | 0.844961 | 5.464523e-59 | 8.969109e-56 |
| MsG0380016985.01 | MsG0480020416.01 | 0.837554 | 4.852994e-57 | 6.326607e-54 |
| MsG0380016985.01 | MsG0480020560.01 | 0.836854 | 7.330363e-57 | 9.354090e-54 |
| MsG0380016985.01 | MsG0480020591.01 | 0.836921 | 7.045918e-57 | 9.009042e-54 |
| MsG0380016985.01 | MsG0480020675.01 | 0.804574 | 2.023335e-49 | 1.046902e-46 |
| MsG0380016985.01 | MsG0480020780.01 | 0.813896 | 2.029434e-51 | 1.341887e-48 |
| MsG0380016985.01 | MsG0480020791.01 | 0.884572 | 1.710334e-71 | 1.134273e-67 |
| MsG0380016985.01 | MsG0480020917.01 | 0.844722 | 6.340146e-59 | 1.032808e-55 |
| MsG0380016985.01 | MsG0480021240.01 | 0.830608 | 2.667826e-55 | 2.824859e-52 |
| MsG0380016985.01 | MsG0480021432.01 | 0.836341 | 9.903282e-57 | 1.244530e-53 |
| MsG0380016985.01 | MsG0480021448.01 | 0.821413 | 4.092005e-53 | 3.326723e-50 |
| MsG0380016985.01 | MsG0480021695.01 | 0.821701 | 3.510912e-53 | 2.877559e-50 |
| MsG0380016985.01 | MsG0480021772.01 | 0.862626 | 4.436586e-64 | 1.307715e-60 |
| MsG0380016985.01 | MsG0480021812.01 | 0.827841 | 1.251992e-54 | 1.222890e-51 |
| MsG0380016985.01 | MsG0480021900.01 | 0.804309 | 2.298222e-49 | 1.181033e-46 |
| MsG0380016985.01 | MsG0480022094.01 | 0.830371 | 3.049477e-55 | 3.206725e-52 |
| MsG0380016985.01 | MsG0480022104.01 | 0.805620 | 1.222430e-49 | 6.497579e-47 |
| MsG0380016985.01 | MsG0480022115.01 | 0.845451 | 4.027951e-59 | 6.715037e-56 |
| MsG0380016985.01 | MsG0480022228.01 | 0.865154 | 7.254530e-65 | 2.336646e-61 |
| MsG0380016985.01 | MsG0480022318.01 | 0.812794 | 3.543518e-51 | 2.274068e-48 |
| MsG0380016985.01 | MsG0480022464.01 | 0.811728 | 6.053867e-51 | 3.776313e-48 |
| MsG0380016985.01 | MsG0480022480.01 | 0.801999 | 6.908620e-49 | 3.346460e-46 |
| MsG0380016985.01 | MsG0480022597.01 | 0.812807 | 3.521084e-51 | 2.260402e-48 |
| MsG0380016985.01 | MsG0480022598.01 | 0.803556 | 3.295709e-49 | 1.661294e-46 |
| MsG0380016985.01 | MsG0480022620.01 | 0.835071 | 2.076949e-56 | 2.511686e-53 |
| MsG0380016985.01 | MsG0480022678.01 | 0.830894 | 2.270331e-55 | 2.424434e-52 |
| MsG0380016985.01 | MsG0480022696.01 | 0.812618 | 3.872833e-51 | 2.474123e-48 |
| MsG0380016985.01 | MsG0480022717.01 | 0.872313 | 3.501524e-67 | 1.458339e-63 |
| MsG0380016985.01 | MsG0480022719.01 | 0.840658 | 7.614771e-58 | 1.092059e-54 |
| MsG0380016985.01 | MsG0480022825.01 | 0.802257 | 6.112560e-49 | 2.980486e-46 |
| MsG0380016985.01 | MsG0480023013.01 | 0.813099 | 3.037918e-51 | 1.965527e-48 |
| MsG0380016985.01 | MsG0480023014.01 | 0.804745 | 1.864220e-49 | 9.689175e-47 |
| MsG0380016985.01 | MsG0480023025.01 | 0.803621 | 3.194201e-49 | 1.612731e-46 |
| MsG0380016985.01 | MsG0480023240.01 | 0.850792 | 1.350055e-60 | 2.675496e-57 |
| MsG0380016985.01 | MsG0480023245.01 | 0.824247 | 8.950525e-54 | 7.884497e-51 |
| MsG0380016985.01 | MsG0480023412.01 | 0.813905 | 2.019989e-51 | 1.335938e-48 |
| MsG0380016985.01 | MsG0480023447.01 | 0.856981 | 2.226913e-62 | 5.411908e-59 |
| MsG0380016985.01 | MsG0480023500.01 | 0.850431 | 1.706012e-60 | 3.341199e-57 |
| MsG0380016985.01 | MsG0480023517.01 | 0.803763 | 2.984496e-49 | 1.512384e-46 |
| MsG0380016985.01 | MsG0480023559.01 | 0.821243 | 4.478877e-53 | 3.624031e-50 |
| MsG0380016985.01 | MsG0480023600.01 | 0.814758 | 1.308828e-51 | 8.858050e-49 |
| MsG0380016985.01 | MsG0480023718.01 | 0.832328 | 1.006542e-55 | 1.121245e-52 |
| MsG0380016985.01 | MsG0580024191.01 | 0.804101 | 2.538967e-49 | 1.297827e-46 |
| MsG0380016985.01 | MsG0580024323.01 | 0.849151 | 3.887006e-60 | 7.302147e-57 |
| MsG0380016985.01 | MsG0580024339.01 | 0.831731 | 1.413760e-55 | 1.547783e-52 |
| MsG0380016985.01 | MsG0580024353.01 | 0.835116 | 2.023958e-56 | 2.451004e-53 |
| MsG0380016985.01 | MsG0580024374.01 | 0.801757 | 7.745813e-49 | 3.728894e-46 |
| MsG0380016985.01 | MsG0580024409.01 | 0.809244 | 2.082524e-50 | 1.216449e-47 |
| MsG0380016985.01 | MsG0580024418.01 | 0.808200 | 3.481313e-50 | 1.978199e-47 |
| MsG0380016985.01 | MsG0580024583.01 | 0.809596 | 1.749983e-50 | 1.031836e-47 |
| MsG0380016985.01 | MsG0580024618.01 | 0.863011 | 3.374122e-64 | 1.007892e-60 |
| MsG0380016985.01 | MsG0580024721.01 | 0.822187 | 2.708189e-53 | 2.250473e-50 |
| MsG0380016985.01 | MsG0580024733.01 | 0.814694 | 1.352428e-51 | 9.137452e-49 |
| MsG0380016985.01 | MsG0580024819.01 | 0.843298 | 1.526658e-58 | 2.378295e-55 |
| MsG0380016985.01 | MsG0580024960.01 | 0.828512 | 8.626076e-55 | 8.592663e-52 |
| MsG0380016985.01 | MsG0580025072.01 | 0.832190 | 1.088734e-55 | 1.207946e-52 |
| MsG0380016985.01 | MsG0580025134.01 | 0.802966 | 4.365143e-49 | 2.167171e-46 |
| MsG0380016985.01 | MsG0580025788.01 | -0.800282 | 1.550804e-48 | 7.192613e-46 |
| MsG0380016985.01 | MsG0580025989.01 | 0.827935 | 1.188169e-54 | 1.163807e-51 |
| MsG0380016985.01 | MsG0580026157.01 | 0.810616 | 1.054944e-50 | 6.389367e-48 |
| MsG0380016985.01 | MsG0580026225.01 | 0.811676 | 6.213683e-51 | 3.870248e-48 |
| MsG0380016985.01 | MsG0580026593.01 | 0.804685 | 1.918417e-49 | 9.954748e-47 |
| MsG0380016985.01 | MsG0580027319.01 | -0.821810 | 3.313066e-53 | 2.723896e-50 |
| MsG0380016985.01 | MsG0580027441.01 | 0.810828 | 9.493080e-51 | 5.782303e-48 |
| MsG0380016985.01 | MsG0580028060.01 | 0.831984 | 1.224279e-55 | 1.350290e-52 |
| MsG0380016985.01 | MsG0580028185.01 | 0.804932 | 1.703271e-49 | 8.895431e-47 |
| MsG0380016985.01 | MsG0580028664.01 | -0.800763 | 1.237326e-48 | 5.808906e-46 |
| MsG0380016985.01 | MsG0580029148.01 | 0.847786 | 9.274626e-60 | 1.666815e-56 |
| MsG0380016985.01 | MsG0580029189.01 | 0.813618 | 2.336395e-51 | 1.533276e-48 |
| MsG0380016985.01 | MsG0580029258.01 | 0.822820 | 1.930684e-53 | 1.633681e-50 |
| MsG0380016985.01 | MsG0580029371.01 | 0.805188 | 1.505880e-49 | 7.915861e-47 |
| MsG0380016985.01 | MsG0580029592.01 | 0.829356 | 5.388790e-55 | 5.502746e-52 |
| MsG0380016985.01 | MsG0580029658.01 | 0.842917 | 1.929429e-58 | 2.969239e-55 |
| MsG0380016985.01 | MsG0580029661.01 | 0.815932 | 7.175125e-52 | 5.014204e-49 |
| MsG0380016985.01 | MsG0580029762.01 | 0.804771 | 1.840658e-49 | 9.572712e-47 |
| MsG0380016985.01 | MsG0580029801.01 | 0.822790 | 1.962159e-53 | 1.658855e-50 |
| MsG0380016985.01 | MsG0580030003.01 | 0.831717 | 1.424928e-55 | 1.559369e-52 |
| MsG0380016985.01 | MsG0580030160.01 | 0.810409 | 1.169100e-50 | 7.041626e-48 |
| MsG0380016985.01 | MsG0580030182.01 | 0.817733 | 2.829567e-52 | 2.077435e-49 |
| MsG0380016985.01 | MsG0580030235.01 | 0.823590 | 1.276559e-53 | 1.103892e-50 |
| MsG0380016985.01 | MsG0680030321.01 | 0.808273 | 3.358315e-50 | 1.912024e-47 |
| MsG0380016985.01 | MsG0680030436.01 | 0.814419 | 1.555552e-51 | 1.043278e-48 |
| MsG0380016985.01 | MsG0680030684.01 | 0.842204 | 2.983006e-58 | 4.489430e-55 |
| MsG0380016985.01 | MsG0680030685.01 | 0.817451 | 3.275254e-52 | 2.386179e-49 |
| MsG0380016985.01 | MsG0680030740.01 | 0.817794 | 2.741053e-52 | 2.015810e-49 |
| MsG0380016985.01 | MsG0680030841.01 | 0.852137 | 5.621278e-61 | 1.163410e-57 |
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| MsG0380016985.01 | MsG0680031506.01 | 0.820264 | 7.519163e-53 | 5.920889e-50 |
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| MsG0380016985.01 | MsG0680031508.01 | 0.840789 | 7.036040e-58 | 1.013221e-54 |
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| MsG0380016985.01 | MsG0780036235.01 | 0.813588 | 2.372831e-51 | 1.555869e-48 |
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| MsG0280007876.01 | MsG0380016985.01 | 0.836646 | 8.282733e-57 | 1.050212e-53 |
| MsG0280008286.01 | MsG0380016985.01 | 0.829743 | 4.339281e-55 | 4.481502e-52 |
| MsG0280008327.01 | MsG0380016985.01 | 0.819401 | 1.184122e-52 | 9.102529e-50 |
| MsG0280008502.01 | MsG0380016985.01 | 0.811732 | 6.042416e-51 | 3.769506e-48 |
| MsG0280008614.01 | MsG0380016985.01 | 0.836479 | 9.137857e-57 | 1.152963e-53 |
| MsG0280008885.01 | MsG0380016985.01 | 0.862543 | 4.705915e-64 | 1.383167e-60 |
| MsG0280008907.01 | MsG0380016985.01 | 0.819328 | 1.230403e-52 | 9.438675e-50 |
| MsG0280008909.01 | MsG0380016985.01 | 0.825118 | 5.581415e-54 | 5.041299e-51 |
| MsG0280009065.01 | MsG0380016985.01 | 0.809418 | 1.910837e-50 | 1.121366e-47 |
| MsG0280009141.01 | MsG0380016985.01 | 0.811271 | 7.612187e-51 | 4.691135e-48 |
| MsG0280009774.01 | MsG0380016985.01 | 0.804635 | 1.965037e-49 | 1.018313e-46 |
| MsG0280009996.01 | MsG0380016985.01 | 0.807092 | 5.983557e-50 | 3.302847e-47 |
| MsG0280010002.01 | MsG0380016985.01 | 0.847772 | 9.361801e-60 | 1.681602e-56 |
| MsG0280010022.01 | MsG0380016985.01 | 0.849655 | 2.813140e-60 | 5.370650e-57 |
| MsG0280010176.01 | MsG0380016985.01 | 0.803940 | 2.741945e-49 | 1.395906e-46 |
| MsG0280010389.01 | MsG0380016985.01 | 0.827833 | 1.257242e-54 | 1.227716e-51 |
| MsG0280010447.01 | MsG0380016985.01 | 0.817957 | 2.517740e-52 | 1.859801e-49 |
| MsG0280010491.01 | MsG0380016985.01 | 0.810807 | 9.593104e-51 | 5.839837e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016985.01.T01 | MTR_3g098730 | 97.196 | 107 | 3 | 0 | 1 | 107 | 431 | 537 | 3.52e-70 | 219 |
| MsG0380016985.01.T01 | MTR_7g076220 | 42.991 | 107 | 61 | 0 | 1 | 107 | 437 | 543 | 6.03e-22 | 89.4 |
| MsG0380016985.01.T01 | MTR_8g032570 | 42.056 | 107 | 62 | 0 | 1 | 107 | 438 | 544 | 1.62e-21 | 88.2 |
| MsG0380016985.01.T01 | MTR_8g032570 | 42.056 | 107 | 62 | 0 | 1 | 107 | 461 | 567 | 1.93e-21 | 87.8 |
| MsG0380016985.01.T01 | MTR_4g007850 | 35.922 | 103 | 65 | 1 | 1 | 102 | 394 | 496 | 8.39e-13 | 63.2 |
| MsG0380016985.01.T01 | MTR_4g091320 | 33.654 | 104 | 68 | 1 | 1 | 103 | 449 | 552 | 1.61e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016985.01.T01 | AT5G50900 | 57.944 | 107 | 45 | 0 | 1 | 107 | 432 | 538 | 1.50e-35 | 127 |
| MsG0380016985.01.T01 | AT2G45720 | 46.729 | 107 | 57 | 0 | 1 | 107 | 430 | 536 | 7.43e-24 | 94.7 |
| MsG0380016985.01.T01 | AT2G45720 | 46.729 | 107 | 57 | 0 | 1 | 107 | 430 | 536 | 7.43e-24 | 94.7 |
| MsG0380016985.01.T01 | AT2G45720 | 46.729 | 107 | 57 | 0 | 1 | 107 | 430 | 536 | 7.43e-24 | 94.7 |
| MsG0380016985.01.T01 | AT2G45720 | 46.729 | 107 | 57 | 0 | 1 | 107 | 430 | 536 | 7.43e-24 | 94.7 |
| MsG0380016985.01.T01 | AT2G45720 | 46.729 | 107 | 57 | 0 | 1 | 107 | 430 | 536 | 7.43e-24 | 94.7 |
| MsG0380016985.01.T01 | AT1G01830 | 35.185 | 108 | 69 | 1 | 1 | 107 | 451 | 558 | 1.22e-13 | 65.9 |
| MsG0380016985.01.T01 | AT1G01830 | 35.185 | 108 | 69 | 1 | 1 | 107 | 451 | 558 | 1.22e-13 | 65.9 |
| MsG0380016985.01.T01 | AT1G01830 | 35.185 | 108 | 69 | 1 | 1 | 107 | 451 | 558 | 1.22e-13 | 65.9 |
| MsG0380016985.01.T01 | AT1G61350 | 31.858 | 113 | 71 | 1 | 1 | 107 | 441 | 553 | 1.38e-12 | 62.8 |
Find 35 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCCTGCTTTGGTTAATT+TGG | 0.181771 | 3:-90312758 | MsG0380016985.01.T01:CDS |
| GCTTGTTGAGTTGGATATTC+CGG | 0.273134 | 3:-90312638 | MsG0380016985.01.T01:CDS |
| GAAATACCCTGTTTCGGTTC+TGG | 0.283357 | 3:-90312731 | MsG0380016985.01.T01:CDS |
| CTTTCAATAGAAGGATCTTT+AGG | 0.301417 | 3:-90312819 | MsG0380016985.01.T01:CDS |
| TGCAGCACCCTTTCAATAGA+AGG | 0.329460 | 3:-90312828 | MsG0380016985.01.T01:CDS |
| CTTGTTGAGTTGGATATTCC+GGG | 0.366525 | 3:-90312637 | MsG0380016985.01.T01:CDS |
| TAACCAAAGCAGGGTTCAAT+AGG | 0.373568 | 3:+90312764 | None:intergenic |
| AGTGAAACCAGAACCGAAAC+AGG | 0.386932 | 3:+90312724 | None:intergenic |
| TCACCTATTGAACCCTGCTT+TGG | 0.400666 | 3:-90312767 | MsG0380016985.01.T01:CDS |
| CGGAAACAAATGGTGGCTGC+TGG | 0.406988 | 3:-90312682 | MsG0380016985.01.T01:CDS |
| GGATAAGAAATACCCTGTTT+CGG | 0.411451 | 3:-90312737 | MsG0380016985.01.T01:CDS |
| TCCTTCTTTGATTAAGATGT+TGG | 0.421703 | 3:-90312905 | MsG0380016985.01.T01:CDS |
| TTATCCAAATTAACCAAAGC+AGG | 0.430725 | 3:+90312754 | None:intergenic |
| ATCTGCTGCAATGGCGTTGT+CGG | 0.448484 | 3:-90312857 | MsG0380016985.01.T01:CDS |
| TAAAGATCCTTCTATTGAAA+GGG | 0.462836 | 3:+90312821 | None:intergenic |
| CTAAAGATCCTTCTATTGAA+AGG | 0.463381 | 3:+90312820 | None:intergenic |
| TACGCAGAAGCTTGTTGAGT+TGG | 0.472425 | 3:-90312647 | MsG0380016985.01.T01:CDS |
| TCTTTGATTAAGATGTTGGA+TGG | 0.483116 | 3:-90312901 | MsG0380016985.01.T01:CDS |
| TCCAACATCTTAATCAAAGA+AGG | 0.499119 | 3:+90312904 | None:intergenic |
| GGAAACAAATGGTGGCTGCT+GGG | 0.501374 | 3:-90312681 | MsG0380016985.01.T01:CDS |
| ATCTAACATTTCTTTGAACC+CGG | 0.508397 | 3:+90312619 | None:intergenic |
| ATTAAGATGTTGGATGGGAA+AGG | 0.520569 | 3:-90312895 | MsG0380016985.01.T01:CDS |
| GAAGACTTGTCGGAAACAAA+TGG | 0.525091 | 3:-90312692 | MsG0380016985.01.T01:CDS |
| GGATCTTTAGGAAGGATGAG+AGG | 0.530549 | 3:-90312807 | MsG0380016985.01.T01:CDS |
| CTTTGATTAAGATGTTGGAT+GGG | 0.539664 | 3:-90312900 | MsG0380016985.01.T01:CDS |
| GATCTTTAGGAAGGATGAGA+GGG | 0.541790 | 3:-90312806 | MsG0380016985.01.T01:CDS |
| GAAACAAATGGTGGCTGCTG+GGG | 0.546643 | 3:-90312680 | MsG0380016985.01.T01:CDS |
| CAATAGAAGGATCTTTAGGA+AGG | 0.547514 | 3:-90312815 | MsG0380016985.01.T01:CDS |
| ATCTTTAGGAAGGATGAGAG+GGG | 0.554644 | 3:-90312805 | MsG0380016985.01.T01:CDS |
| GGAGAAAGAATCTGCTGCAA+TGG | 0.567130 | 3:-90312866 | MsG0380016985.01.T01:CDS |
| TATCCAAATTAACCAAAGCA+GGG | 0.575946 | 3:+90312755 | None:intergenic |
| GATGTTGGATGGGAAAGGCG+TGG | 0.603804 | 3:-90312890 | MsG0380016985.01.T01:CDS |
| GTTGGATGGGAAAGGCGTGG+AGG | 0.641910 | 3:-90312887 | MsG0380016985.01.T01:CDS |
| GACTTGTCGGAAACAAATGG+TGG | 0.684138 | 3:-90312689 | MsG0380016985.01.T01:CDS |
| GTGAAACCAGAACCGAAACA+GGG | 0.684741 | 3:+90312725 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAAAGATCCTTCTATTGAAA+GGG | + | Chr3:90312728-90312747 | None:intergenic | 25.0% |
| CTAAAGATCCTTCTATTGAA+AGG | + | Chr3:90312729-90312748 | None:intergenic | 30.0% | |
| CTTTCAATAGAAGGATCTTT+AGG | - | Chr3:90312727-90312746 | MsG0380016985.01.T01:CDS | 30.0% | |
| CTTTGATTAAGATGTTGGAT+GGG | - | Chr3:90312646-90312665 | MsG0380016985.01.T01:CDS | 30.0% | |
| TATCCAAATTAACCAAAGCA+GGG | + | Chr3:90312794-90312813 | None:intergenic | 30.0% | |
| TCCAACATCTTAATCAAAGA+AGG | + | Chr3:90312645-90312664 | None:intergenic | 30.0% | |
| TCCTTCTTTGATTAAGATGT+TGG | - | Chr3:90312641-90312660 | MsG0380016985.01.T01:CDS | 30.0% | |
| TCTTTGATTAAGATGTTGGA+TGG | - | Chr3:90312645-90312664 | MsG0380016985.01.T01:CDS | 30.0% | |
| TTATCCAAATTAACCAAAGC+AGG | + | Chr3:90312795-90312814 | None:intergenic | 30.0% | |
| ATTAAGATGTTGGATGGGAA+AGG | - | Chr3:90312651-90312670 | MsG0380016985.01.T01:CDS | 35.0% | |
| GGATAAGAAATACCCTGTTT+CGG | - | Chr3:90312809-90312828 | MsG0380016985.01.T01:CDS | 35.0% | |
| ! | CAATAGAAGGATCTTTAGGA+AGG | - | Chr3:90312731-90312750 | MsG0380016985.01.T01:CDS | 35.0% |
| ! | TTTTGCATTCGAAGACTTGT+CGG | - | Chr3:90312844-90312863 | MsG0380016985.01.T01:CDS | 35.0% |
| GAACCCTGCTTTGGTTAATT+TGG | - | Chr3:90312788-90312807 | MsG0380016985.01.T01:CDS | 40.0% | |
| GAAGACTTGTCGGAAACAAA+TGG | - | Chr3:90312854-90312873 | MsG0380016985.01.T01:CDS | 40.0% | |
| TAACCAAAGCAGGGTTCAAT+AGG | + | Chr3:90312785-90312804 | None:intergenic | 40.0% | |
| ! | ATCTTTAGGAAGGATGAGAG+GGG | - | Chr3:90312741-90312760 | MsG0380016985.01.T01:CDS | 40.0% |
| ! | GATCTTTAGGAAGGATGAGA+GGG | - | Chr3:90312740-90312759 | MsG0380016985.01.T01:CDS | 40.0% |
| !! | CTTGTTGAGTTGGATATTCC+GGG | - | Chr3:90312909-90312928 | MsG0380016985.01.T01:CDS | 40.0% |
| !! | GCTTGTTGAGTTGGATATTC+CGG | - | Chr3:90312908-90312927 | MsG0380016985.01.T01:CDS | 40.0% |
| AGTGAAACCAGAACCGAAAC+AGG | + | Chr3:90312825-90312844 | None:intergenic | 45.0% | |
| GAAATACCCTGTTTCGGTTC+TGG | - | Chr3:90312815-90312834 | MsG0380016985.01.T01:CDS | 45.0% | |
| GACTTGTCGGAAACAAATGG+TGG | - | Chr3:90312857-90312876 | MsG0380016985.01.T01:CDS | 45.0% | |
| GGAGAAAGAATCTGCTGCAA+TGG | - | Chr3:90312680-90312699 | MsG0380016985.01.T01:CDS | 45.0% | |
| GTGAAACCAGAACCGAAACA+GGG | + | Chr3:90312824-90312843 | None:intergenic | 45.0% | |
| TCACCTATTGAACCCTGCTT+TGG | - | Chr3:90312779-90312798 | MsG0380016985.01.T01:CDS | 45.0% | |
| TGCAGCACCCTTTCAATAGA+AGG | - | Chr3:90312718-90312737 | MsG0380016985.01.T01:CDS | 45.0% | |
| ! | GGATCTTTAGGAAGGATGAG+AGG | - | Chr3:90312739-90312758 | MsG0380016985.01.T01:CDS | 45.0% |
| !! | TACGCAGAAGCTTGTTGAGT+TGG | - | Chr3:90312899-90312918 | MsG0380016985.01.T01:CDS | 45.0% |
| ATCTGCTGCAATGGCGTTGT+CGG | - | Chr3:90312689-90312708 | MsG0380016985.01.T01:CDS | 50.0% | |
| GAAACAAATGGTGGCTGCTG+GGG | - | Chr3:90312866-90312885 | MsG0380016985.01.T01:CDS | 50.0% | |
| GGAAACAAATGGTGGCTGCT+GGG | - | Chr3:90312865-90312884 | MsG0380016985.01.T01:CDS | 50.0% | |
| CGGAAACAAATGGTGGCTGC+TGG | - | Chr3:90312864-90312883 | MsG0380016985.01.T01:CDS | 55.0% | |
| GATGTTGGATGGGAAAGGCG+TGG | - | Chr3:90312656-90312675 | MsG0380016985.01.T01:CDS | 55.0% | |
| ! | GTTGGATGGGAAAGGCGTGG+AGG | - | Chr3:90312659-90312678 | MsG0380016985.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 90312621 | 90312947 | 90312621 | ID=MsG0380016985.01;Name=MsG0380016985.01 |
| Chr3 | mRNA | 90312621 | 90312947 | 90312621 | ID=MsG0380016985.01.T01;Parent=MsG0380016985.01;Name=MsG0380016985.01.T01;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|108 |
| Chr3 | exon | 90312621 | 90312947 | 90312621 | ID=MsG0380016985.01.T01:exon:5784;Parent=MsG0380016985.01.T01 |
| Chr3 | CDS | 90312621 | 90312947 | 90312621 | ID=MsG0380016985.01.T01:cds;Parent=MsG0380016985.01.T01 |
| Gene Sequence |
| Protein sequence |
