AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028900.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028900.01.T01 MTR_5g077180 92.271 414 30 2 1 412 20 433 0.0 589
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028900.01.T01 AT5G37370 59.756 82 23 4 1 76 21 98 5.20e-19 82.4
MsG0580028900.01.T01 AT5G37370 59.756 82 23 4 1 76 21 98 5.20e-19 82.4
MsG0580028900.01.T01 AT5G37370 58.537 82 24 4 1 76 21 98 7.36e-19 82.0
MsG0580028900.01.T01 AT5G37370 58.537 82 24 4 1 76 21 98 7.36e-19 82.0
MsG0580028900.01.T01 AT5G37370 59.259 81 23 4 1 75 21 97 1.42e-18 80.9
MsG0580028900.01.T01 AT5G37370 59.259 81 23 4 1 75 21 97 1.42e-18 80.9

Find 171 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTATACTAAATTTATTTC+TGG 0.164634 5:-88289236 MsG0580028900.01.T01:three_prime_UTR
AACCAATCTCTTCGTGTAAT+TGG 0.206944 5:-88295693 MsG0580028900.01.T01:intron
AAAGATTTGTACGGTGATTT+AGG 0.215552 5:-88289507 MsG0580028900.01.T01:CDS
TCCCTGTCCCTATCCCTTTC+AGG 0.221156 5:+88289927 None:intergenic
GCTGCCCTTTCAGTCTCTTT+TGG 0.266936 5:-88290086 MsG0580028900.01.T01:CDS
TCACCACTATTATCCCTTCT+AGG 0.271633 5:+88289450 None:intergenic
TTAGACTTGGTGGCTCTTCT+TGG 0.285751 5:-88289419 MsG0580028900.01.T01:CDS
AACCAGCTCCACAGAGTCTT+TGG 0.285766 5:+88292925 None:intergenic
CACGTTCCCTATCCCTTTCT+CGG 0.292416 5:+88289880 None:intergenic
GCTCTGACTGCGATGATTGC+TGG 0.309396 5:+88289959 None:intergenic
ACTTGGTTGACATAAGTTAT+AGG 0.309738 5:-88289295 MsG0580028900.01.T01:three_prime_UTR
TGATTCTGAGGCTTAGGTTT+GGG 0.318766 5:+88295746 None:intergenic
ACCTGACGCATTACAGGAAC+TGG 0.327476 5:+88290218 None:intergenic
GCCACAACCTGACGCATTAC+AGG 0.330998 5:+88290212 None:intergenic
GCGTCAGGTTGTGGCAAATC+TGG 0.336533 5:-88290204 MsG0580028900.01.T01:CDS
TATTCTCATCAATAACTTCA+TGG 0.339393 5:+88294484 None:intergenic
TTCTAATGTTGAATACCTTT+AGG 0.346432 5:-88289101 MsG0580028900.01.T01:three_prime_UTR
AAAGGGATAGGGAACGTGAT+AGG 0.370047 5:-88289875 MsG0580028900.01.T01:CDS
AGAGAAGTTATGATTATGAT+AGG 0.373861 5:-88289740 MsG0580028900.01.T01:CDS
GCTCTTATGTAAGGAGAATC+AGG 0.377200 5:+88294336 None:intergenic
ACTTGCATTCCACTTACCTT+TGG 0.377832 5:-88288860 MsG0580028900.01.T01:three_prime_UTR
ACAGGGAGCGGTCACGCTCC+AGG 0.378200 5:-88289911 MsG0580028900.01.T01:CDS
CCTTTCTCGGTCCCTGTCCC+TGG 0.381415 5:+88289893 None:intergenic
CATGGCGTGCGGTGCCAACT+TGG 0.388924 5:+88289598 None:intergenic
AGCGGTCACGCTCCAGGGAC+AGG 0.394319 5:-88289905 MsG0580028900.01.T01:CDS
TATATCCGTGATTTGCTCCT+TGG 0.397027 5:-88291997 MsG0580028900.01.T01:CDS
ACCGAGATGCTGAAAGATAC+AGG 0.397891 5:-88289821 MsG0580028900.01.T01:CDS
CTCTCGGTCCCTATCCCTCC+TGG 0.402821 5:+88289761 None:intergenic
CTGCTTGACAGTGAGCTTCA+TGG 0.403160 5:+88294379 None:intergenic
CTCGGTCCTTGTTCCTATCT+CGG 0.405225 5:+88289838 None:intergenic
CATTGCCTTTCATTATCACT+TGG 0.408079 5:-88289312 MsG0580028900.01.T01:three_prime_UTR
TTGATTCTGAGGCTTAGGTT+TGG 0.410927 5:+88295745 None:intergenic
GGGACAGATCCAGGAGGGAT+AGG 0.413562 5:-88289770 MsG0580028900.01.T01:CDS
ATCATGGAGATACAGACTTC+TGG 0.414622 5:-88294596 MsG0580028900.01.T01:five_prime_UTR
TCCTGTAATGCGTCAGGTTG+TGG 0.416923 5:-88290213 MsG0580028900.01.T01:CDS
CCAGGGACAGGGACCGAGAA+AGG 0.423524 5:-88289893 MsG0580028900.01.T01:CDS
AAGTCTAAAACTTGCAAAGC+AGG 0.424980 5:+88289201 None:intergenic
CCGTGATTTGCTCCTTGGAC+AGG 0.429155 5:-88291992 MsG0580028900.01.T01:intron
TTCTTCACCCATTCGTCGTA+CGG 0.437084 5:-88290030 MsG0580028900.01.T01:CDS
CTCTGACTGCGATGATTGCT+GGG 0.437763 5:+88289960 None:intergenic
ACAGGGACCGAGAAAGGGAT+AGG 0.439373 5:-88289887 MsG0580028900.01.T01:CDS
TTTCTCTAGCAAGACTCAAT+TGG 0.440764 5:+88294569 None:intergenic
CCCTGTATCTTTCAGCATCT+CGG 0.447442 5:+88289820 None:intergenic
ACAGGGATCGGGACCGGGAT+AGG 0.448801 5:-88289803 MsG0580028900.01.T01:CDS
ACCTCATCATCCTTTGCATA+TGG 0.450018 5:+88292898 None:intergenic
ACATGGAAAGAATTCCTAGA+AGG 0.450119 5:-88289464 MsG0580028900.01.T01:CDS
ATCCAAAGACTCTGTGGAGC+TGG 0.453230 5:-88292927 MsG0580028900.01.T01:CDS
ATCGTGGAACCATGGATGAC+GGG 0.453282 5:-88294450 MsG0580028900.01.T01:CDS
CCCAGTTCCTGTAATGCGTC+AGG 0.457842 5:-88290219 MsG0580028900.01.T01:CDS
TACCAATTACACGAAGAGAT+TGG 0.468838 5:+88295691 None:intergenic
TGCCAACTTGGCTCTGACTT+CGG 0.478380 5:+88289610 None:intergenic
TTTAAAGCTAAAACTCCTAA+AGG 0.479611 5:+88289086 None:intergenic
GTGAATATCCTGAAAGGGAT+AGG 0.479720 5:-88289935 MsG0580028900.01.T01:CDS
AAAGATACAGGGATCGGGAC+CGG 0.479933 5:-88289809 MsG0580028900.01.T01:CDS
CGCCACATCGAGCCTCTACA+AGG 0.483631 5:-88290055 MsG0580028900.01.T01:CDS
CTACATACCGCTCTTATGTA+AGG 0.483855 5:+88294327 None:intergenic
ACAGCATTGGCAATGGTAGT+AGG 0.483968 5:-88289674 MsG0580028900.01.T01:CDS
ACTATGAGAGGGACAGATCC+AGG 0.484456 5:-88289779 MsG0580028900.01.T01:CDS
ACAGATATTATGACCGAGAT+AGG 0.486094 5:-88289851 MsG0580028900.01.T01:CDS
ATCCTGAAAGGGATAGGGAC+AGG 0.486555 5:-88289929 MsG0580028900.01.T01:CDS
CTTTCACAGAAGGTGGTCTA+CGG 0.486987 5:+88290108 None:intergenic
GGACAGATCCAGGAGGGATA+GGG 0.488374 5:-88289769 MsG0580028900.01.T01:CDS
TCTAGGAATTCTTTCCATGT+TGG 0.493850 5:+88289467 None:intergenic
GGTGAAGAGGTTATTAGACT+TGG 0.496955 5:-88289432 MsG0580028900.01.T01:CDS
TATCCCTTTCAGGATATTCA+CGG 0.497547 5:+88289937 None:intergenic
ACGACATCAGATTATTGACT+TGG 0.498873 5:+88289063 None:intergenic
AAAATTAAGCCAAAGGTAAG+TGG 0.499942 5:+88288851 None:intergenic
GTCGTACCACAATGTGTAGT+AGG 0.500096 5:+88290167 None:intergenic
CAGGGATCGGGACCGGGATA+GGG 0.504741 5:-88289802 MsG0580028900.01.T01:CDS
CTCACTGTCAAGCAGATGCA+TGG 0.508388 5:-88294371 MsG0580028900.01.T01:CDS
GCAGGTACCGTACGACGAAT+GGG 0.512160 5:+88290023 None:intergenic
AGCAGGTACCGTACGACGAA+TGG 0.515431 5:+88290022 None:intergenic
GAAGAGGTTATTAGACTTGG+TGG 0.517064 5:-88289429 MsG0580028900.01.T01:CDS
TGCTGAAAGATACAGGGATC+GGG 0.517734 5:-88289814 MsG0580028900.01.T01:CDS
AAGGGATAGGGAACGTGATA+GGG 0.519008 5:-88289874 MsG0580028900.01.T01:CDS
ACGCAGAGAGAGAAAGTAGC+CGG 0.520155 5:-88289707 MsG0580028900.01.T01:CDS
AAGATACAGGGATCGGGACC+GGG 0.522026 5:-88289808 MsG0580028900.01.T01:CDS
GTCATCCGTCCATTAGATCC+AGG 0.523423 5:+88292033 None:intergenic
CGCTCTAGTCCACAGAGAGA+TGG 0.529001 5:-88289570 MsG0580028900.01.T01:CDS
TAGGTTTGGGTAATCGAAAG+AGG 0.533552 5:+88295759 None:intergenic
CGACAGTTCCCCGTCATCCA+TGG 0.535024 5:+88294441 None:intergenic
AGCCGAAGTCAGAGCCAAGT+TGG 0.536221 5:-88289612 MsG0580028900.01.T01:CDS
ACTACACATTGTGGTACGAC+AGG 0.536972 5:-88290164 MsG0580028900.01.T01:CDS
AAAGGGATAGGGACAGGGAG+CGG 0.538983 5:-88289923 MsG0580028900.01.T01:CDS
TTTCACAGAAGGTGGTCTAC+GGG 0.540490 5:+88290109 None:intergenic
AGTGTCATCAGAACCGTGAC+GGG 0.541768 5:+88290133 None:intergenic
CCCTCTCATAGTCCCTATCC+CGG 0.545144 5:+88289790 None:intergenic
CATAATCATAACTTCTCTCT+CGG 0.545819 5:+88289745 None:intergenic
CAGGGAGCGGTCACGCTCCA+GGG 0.545850 5:-88289910 MsG0580028900.01.T01:CDS
GTCAACCAAGTGATAATGAA+AGG 0.549160 5:+88289307 None:intergenic
CGCAGAGAGAGAAAGTAGCC+GGG 0.549213 5:-88289706 MsG0580028900.01.T01:CDS
AAGGGATAATAGTGGTGAAG+AGG 0.549270 5:-88289445 MsG0580028900.01.T01:CDS
CAGGGACAGGGACCGAGAAA+GGG 0.551544 5:-88289892 MsG0580028900.01.T01:CDS
CAGGGACCGAGAAAGGGATA+GGG 0.551648 5:-88289886 MsG0580028900.01.T01:CDS
TGTGTAACTGTTGGAGTGAG+AGG 0.551897 5:-88294640 MsG0580028900.01.T01:five_prime_UTR
GAAGTTATGATTATGATAGG+AGG 0.553854 5:-88289737 MsG0580028900.01.T01:CDS
GTCGGAGTAGAAGTAGGAGC+AGG 0.556706 5:-88289635 MsG0580028900.01.T01:CDS
GCGGTCACGCTCCAGGGACA+GGG 0.556793 5:-88289904 MsG0580028900.01.T01:CDS
CGGGATTATGACAACAGCAT+TGG 0.559737 5:-88289687 MsG0580028900.01.T01:CDS
AGAATGCTTGTATCTGATGC+CGG 0.561175 5:-88289377 MsG0580028900.01.T01:three_prime_UTR
GATCGTGGAACCATGGATGA+CGG 0.563783 5:-88294451 MsG0580028900.01.T01:CDS
GAGCCGTGAATATCCTGAAA+GGG 0.564193 5:-88289940 MsG0580028900.01.T01:CDS
TCTAGCAAGACTCAATTGGC+CGG 0.565668 5:+88294573 None:intergenic
GCTAAACTTAAAGATTTGTA+CGG 0.567299 5:-88289516 MsG0580028900.01.T01:CDS
CTCTTATGTAAGGAGAATCA+GGG 0.568934 5:+88294337 None:intergenic
CAATGCTGTTGTCATAATCC+CGG 0.569029 5:+88289688 None:intergenic
CATGGAAAGAATTCCTAGAA+GGG 0.569552 5:-88289463 MsG0580028900.01.T01:CDS
GCTGACCAAAAGAGACTGAA+AGG 0.571040 5:+88290081 None:intergenic
TGAATATCCTGAAAGGGATA+GGG 0.572865 5:-88289934 MsG0580028900.01.T01:CDS
GTAGGAGTCGGAGTAGAAGT+AGG 0.573084 5:-88289641 MsG0580028900.01.T01:CDS
TGCTGTCTAGATGCAAATGA+TGG 0.573433 5:-88289013 MsG0580028900.01.T01:three_prime_UTR
ATGCTGAAAGATACAGGGAT+CGG 0.578326 5:-88289815 MsG0580028900.01.T01:CDS
GTAGTAGGCGCCATCGCAGT+AGG 0.582103 5:-88289659 MsG0580028900.01.T01:CDS
GTGTAACTGTTGGAGTGAGA+GGG 0.583469 5:-88294639 MsG0580028900.01.T01:five_prime_UTR
AAGAAGACAGAAAGCAGTGA+AGG 0.584058 5:+88294414 None:intergenic
GTGGACTAGAGCGTGAGTCA+TGG 0.585031 5:+88289580 None:intergenic
AGTCTAAAACTTGCAAAGCA+GGG 0.585675 5:+88289202 None:intergenic
TCGTACCACAATGTGTAGTA+GGG 0.586324 5:+88290168 None:intergenic
TTTCTCCTGGATCTAATGGA+CGG 0.588245 5:-88292038 MsG0580028900.01.T01:CDS
ATTCCTAGAAGGGATAATAG+TGG 0.588421 5:-88289453 MsG0580028900.01.T01:CDS
GAAAGGGCAGCTTTCACAGA+AGG 0.590339 5:+88290098 None:intergenic
GGCGCCATCGCAGTAGGAGT+CGG 0.590973 5:-88289653 MsG0580028900.01.T01:CDS
ACCGGGATAGGGACTATGAG+AGG 0.593083 5:-88289791 MsG0580028900.01.T01:CDS
TTGACAAAATGTGTAACTGT+TGG 0.594168 5:-88294649 MsG0580028900.01.T01:five_prime_UTR
TTCTTACTTCCATCTCTCTG+TGG 0.595516 5:+88289561 None:intergenic
TCAAGTTGATCGTGGAACCA+TGG 0.596755 5:-88294458 MsG0580028900.01.T01:CDS
CTACACATTGTGGTACGACA+GGG 0.597615 5:-88290163 MsG0580028900.01.T01:CDS
TACTCCGACTCCTACTGCGA+TGG 0.600763 5:+88289649 None:intergenic
ATGACAGAATATTCATGCAA+AGG 0.601691 5:+88294544 None:intergenic
CTGACCAAAAGAGACTGAAA+GGG 0.606327 5:+88290082 None:intergenic
AAGCAAAGGAGATGCCAACA+TGG 0.607508 5:-88289481 MsG0580028900.01.T01:CDS
TATGACAACAGCATTGGCAA+TGG 0.607613 5:-88289681 MsG0580028900.01.T01:CDS
TCACTGTCAAGCAGATGCAT+GGG 0.608557 5:-88294370 MsG0580028900.01.T01:CDS
CCGAGATGCTGAAAGATACA+GGG 0.609600 5:-88289820 MsG0580028900.01.T01:CDS
TCCTGAAAGGGATAGGGACA+GGG 0.610463 5:-88289928 MsG0580028900.01.T01:CDS
CAGTGTCATCAGAACCGTGA+CGG 0.611533 5:+88290132 None:intergenic
AAAGATAACGAACCTGTCCA+AGG 0.612596 5:+88291980 None:intergenic
AGAGCCGTGAATATCCTGAA+AGG 0.614212 5:-88289941 MsG0580028900.01.T01:CDS
CTGGTTTGAGCCATATGCAA+AGG 0.614974 5:-88292908 MsG0580028900.01.T01:CDS
GATAATGAAAGGCAATGCAA+AGG 0.618209 5:+88289318 None:intergenic
AATGGACGGATGACTACGAT+GGG 0.618551 5:-88292024 MsG0580028900.01.T01:CDS
ACAGGGGAAACCACCCGTCA+CGG 0.619623 5:-88290146 MsG0580028900.01.T01:CDS
AGGGCAGCTTTCACAGAAGG+TGG 0.621262 5:+88290101 None:intergenic
ACATAGTTTCAACTGAACAA+TGG 0.625915 5:+88289144 None:intergenic
CCTGTCCAAGGAGCAAATCA+CGG 0.626413 5:+88291992 None:intergenic
GCCATATGCAAAGGATGATG+AGG 0.627558 5:-88292899 MsG0580028900.01.T01:intron
TGTAACTGTTGGAGTGAGAG+GGG 0.627998 5:-88294638 MsG0580028900.01.T01:five_prime_UTR
TGGATGACGGGGAACTGTCG+TGG 0.628076 5:-88294438 MsG0580028900.01.T01:CDS
TGGAGATACAGACTTCTGGC+CGG 0.629228 5:-88294592 MsG0580028900.01.T01:five_prime_UTR
GGGTGAAGAATCCCTTGTAG+AGG 0.636783 5:+88290043 None:intergenic
TAATGGACGGATGACTACGA+TGG 0.637953 5:-88292025 MsG0580028900.01.T01:CDS
ATTACAGGAACTGGGATGCG+AGG 0.640293 5:+88290227 None:intergenic
CCTGACGCATTACAGGAACT+GGG 0.642825 5:+88290219 None:intergenic
ATGCTGATCCAAAGACTCTG+TGG 0.643414 5:-88292933 MsG0580028900.01.T01:CDS
AAACTCCCTACTACACATTG+TGG 0.647894 5:-88290173 MsG0580028900.01.T01:CDS
GTCATCAGAACCGTGACGGG+TGG 0.647960 5:+88290136 None:intergenic
TCGTGGAACCATGGATGACG+GGG 0.658016 5:-88294449 MsG0580028900.01.T01:CDS
GAATACAATCAAGTTGATCG+TGG 0.661755 5:-88294466 MsG0580028900.01.T01:CDS
CCGGGATAGGGACTATGAGA+GGG 0.668727 5:-88289790 MsG0580028900.01.T01:CDS
AGAGCGTGAGTCATGGCGTG+CGG 0.670383 5:+88289587 None:intergenic
TGATTCTCCTTACATAAGAG+CGG 0.671776 5:-88294334 MsG0580028900.01.T01:intron
TGAGAGGGACAGATCCAGGA+GGG 0.674889 5:-88289775 MsG0580028900.01.T01:CDS
TTGTCAATGTTGACTCTCGG+CGG 0.682478 5:+88294665 None:intergenic
TCCCTTGTAGAGGCTCGATG+TGG 0.691841 5:+88290053 None:intergenic
TACACATTGTGGTACGACAG+GGG 0.693296 5:-88290162 MsG0580028900.01.T01:CDS
TTTCAACTGAACAATGGACA+TGG 0.695088 5:+88289150 None:intergenic
TCTTATGTAAGGAGAATCAG+GGG 0.701941 5:+88294338 None:intergenic
TTATGACCGAGATAGGAACA+AGG 0.707631 5:-88289844 MsG0580028900.01.T01:CDS
GGTGATTTAGGTGAAAGCAA+AGG 0.714464 5:-88289495 MsG0580028900.01.T01:CDS
GCCACATCGAGCCTCTACAA+GGG 0.725791 5:-88290054 MsG0580028900.01.T01:CDS
ATGAGAGGGACAGATCCAGG+AGG 0.739775 5:-88289776 MsG0580028900.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATTAAAAAAGTAGAA+AGG + Chr5:88293465-88293484 None:intergenic 10.0%
!! TTTAAAAATCTAAATATCAA+GGG + Chr5:88292799-88292818 None:intergenic 10.0%
!!! AAAATTAATTTTATCTATGA+GGG - Chr5:88292235-88292254 MsG0580028900.01.T01:intron 10.0%
!!! AAATTAATTCTTTTTATATG+TGG + Chr5:88289594-88289613 None:intergenic 10.0%
!! AAAAACTTAATAAATGACAT+TGG + Chr5:88291824-88291843 None:intergenic 15.0%
!! AAGAAAATTAACTACTAATA+AGG + Chr5:88289356-88289375 None:intergenic 15.0%
!! AGAAAATTAACTACTAATAA+GGG + Chr5:88289355-88289374 None:intergenic 15.0%
!! ATGTATACTAAATTTATTTC+TGG - Chr5:88295416-88295435 MsG0580028900.01.T01:intron 15.0%
!! ATTTATAAAAGAAGCAAATA+AGG + Chr5:88293889-88293908 None:intergenic 15.0%
!! GTTTAAAAATCTAAATATCA+AGG + Chr5:88292800-88292819 None:intergenic 15.0%
!! TTAAATAATCATGGATATTA+CGG + Chr5:88291386-88291405 None:intergenic 15.0%
!! TTCAAATTTGATAAAATTGA+GGG - Chr5:88293360-88293379 MsG0580028900.01.T01:intron 15.0%
!! TTCTTTAATAATACTACTTA+GGG - Chr5:88293994-88294013 MsG0580028900.01.T01:intron 15.0%
!! TTTAAACATAATGACTTATA+AGG - Chr5:88292813-88292832 MsG0580028900.01.T01:intron 15.0%
!! TTTCAAATTTGATAAAATTG+AGG - Chr5:88293359-88293378 MsG0580028900.01.T01:intron 15.0%
!!! CAAAATTAATTTTATCTATG+AGG - Chr5:88292234-88292253 MsG0580028900.01.T01:intron 15.0%
!!! TAATCAAATTGTTAGATTTT+GGG - Chr5:88293237-88293256 MsG0580028900.01.T01:intron 15.0%
!!! TACTTGTTTGATTTAATTAT+GGG - Chr5:88290541-88290560 MsG0580028900.01.T01:intron 15.0%
!!! TCTTTTATAAATACTACTTA+GGG - Chr5:88293897-88293916 MsG0580028900.01.T01:intron 15.0%
!!! TTACTTGTTTGATTTAATTA+TGG - Chr5:88290540-88290559 MsG0580028900.01.T01:intron 15.0%
!!! TTCTTTTATAAATACTACTT+AGG - Chr5:88293896-88293915 MsG0580028900.01.T01:intron 15.0%
!! AAAAATGTTAAGGGAAATAT+AGG + Chr5:88293707-88293726 None:intergenic 20.0%
!! AAACAAATAACTATCTTTCA+TGG + Chr5:88292455-88292474 None:intergenic 20.0%
!! ACAAGATAAAATGGATATAA+GGG + Chr5:88291642-88291661 None:intergenic 20.0%
!! ATGAAAGATAGTTATTTGTT+TGG - Chr5:88292454-88292473 MsG0580028900.01.T01:intron 20.0%
!! ATTAAAAAAGTAGAAAGGAA+TGG + Chr5:88293460-88293479 None:intergenic 20.0%
!! CCTAAAAGCTAAAATTAAAA+AGG + Chr5:88291593-88291612 None:intergenic 20.0%
!! CTAAAAGACTTAAATAATCA+TGG + Chr5:88291395-88291414 None:intergenic 20.0%
!! CTTCTTTAATAATACTACTT+AGG - Chr5:88293993-88294012 MsG0580028900.01.T01:intron 20.0%
!! TAAACGAAAGAAAAAAATCA+TGG + Chr5:88289089-88289108 None:intergenic 20.0%
!! TAAATAATCATGGATATTAC+GGG + Chr5:88291385-88291404 None:intergenic 20.0%
!! TACCAAAATCTTGATAAATT+TGG + Chr5:88292400-88292419 None:intergenic 20.0%
!! TCTAATTGTAAACTAAATAG+AGG - Chr5:88292018-88292037 MsG0580028900.01.T01:CDS 20.0%
!! TGAAAGATAGTTATTTGTTT+GGG - Chr5:88292455-88292474 MsG0580028900.01.T01:intron 20.0%
!! TTACCAATTTCCAATAAAAA+GGG - Chr5:88289050-88289069 MsG0580028900.01.T01:three_prime_UTR 20.0%
!! TTATTGGAAATTGGTAAATT+GGG + Chr5:88289047-88289066 None:intergenic 20.0%
!! TTTACCAATTTCCAATAAAA+AGG - Chr5:88289049-88289068 MsG0580028900.01.T01:three_prime_UTR 20.0%
!! TTTATTGGAAATTGGTAAAT+TGG + Chr5:88289048-88289067 None:intergenic 20.0%
!!! AGAAAAAAAACCCTTTTTAT+TGG + Chr5:88289063-88289082 None:intergenic 20.0%
!!! ATGATTTTTTTCTTTCGTTT+AGG - Chr5:88289088-88289107 MsG0580028900.01.T01:three_prime_UTR 20.0%
!!! ATTTACTTGTAATTTTATGC+AGG + Chr5:88295755-88295774 None:intergenic 20.0%
!!! CCTTTTTAATTTTAGCTTTT+AGG - Chr5:88291590-88291609 MsG0580028900.01.T01:intron 20.0%
!!! GTAATCAAATTGTTAGATTT+TGG - Chr5:88293236-88293255 MsG0580028900.01.T01:intron 20.0%
!!! TAGACTTAATGATCATTTTA+TGG - Chr5:88295467-88295486 MsG0580028900.01.T01:intron 20.0%
!!! TCGAATGAATATCTATTTTA+GGG - Chr5:88292489-88292508 MsG0580028900.01.T01:intron 20.0%
!!! TTTTTTTTTCCTTTTTACCA+CGG - Chr5:88293071-88293090 MsG0580028900.01.T01:intron 20.0%
! AAAATCTAAATATCAAGGGT+CGG + Chr5:88292795-88292814 None:intergenic 25.0%
! AAATACTCGCGAAAAAATAA+AGG + Chr5:88294172-88294191 None:intergenic 25.0%
! AAATTTGATAAAATTGAGGG+AGG - Chr5:88293363-88293382 MsG0580028900.01.T01:intron 25.0%
! AAGGAAATTAAGCTTCATAA+AGG + Chr5:88293580-88293599 None:intergenic 25.0%
! AAGTAGAATACTATTCTTCA+AGG - Chr5:88293333-88293352 MsG0580028900.01.T01:intron 25.0%
! AATAACTATCTTTCATGGAA+AGG + Chr5:88292450-88292469 None:intergenic 25.0%
! AATTAGAAGAAAAGAAAACG+CGG + Chr5:88289006-88289025 None:intergenic 25.0%
! AATTCAAATAGTAGAAAGAG+GGG + Chr5:88289133-88289152 None:intergenic 25.0%
! AGAATTCAAATAGTAGAAAG+AGG + Chr5:88289135-88289154 None:intergenic 25.0%
! AGAGAAGTTATGATTATGAT+AGG - Chr5:88294912-88294931 MsG0580028900.01.T01:intron 25.0%
! AGTAGAATACTATTCTTCAA+GGG - Chr5:88293334-88293353 MsG0580028900.01.T01:intron 25.0%
! AGTATACTTATAAGAATTGC+TGG + Chr5:88293033-88293052 None:intergenic 25.0%
! ATATTTCTTGATATGCAAGA+TGG + Chr5:88290483-88290502 None:intergenic 25.0%
! ATGAAAACTAGAAGTAAAAG+AGG + Chr5:88291513-88291532 None:intergenic 25.0%
! ATGACCAACAAAATATCAAT+GGG + Chr5:88293934-88293953 None:intergenic 25.0%
! ATGCAAAATTAATGACACAT+AGG + Chr5:88293522-88293541 None:intergenic 25.0%
! CAAATGCATTTAGATGATAA+CGG - Chr5:88292758-88292777 MsG0580028900.01.T01:intron 25.0%
! CACAAGATAAAATGGATATA+AGG + Chr5:88291643-88291662 None:intergenic 25.0%
! CTTATACAAGTTAAATTACC+AGG + Chr5:88294354-88294373 None:intergenic 25.0%
! CTTTCTTATGATATCAACTA+TGG + Chr5:88291979-88291998 None:intergenic 25.0%
! GAATTCAAATAGTAGAAAGA+GGG + Chr5:88289134-88289153 None:intergenic 25.0%
! GATAAAGAAATATGAGAAGT+AGG - Chr5:88292100-88292119 MsG0580028900.01.T01:intron 25.0%
! GATTCAAACTTTGATATTCT+TGG - Chr5:88293762-88293781 MsG0580028900.01.T01:intron 25.0%
! GCTAAACTTAAAGATTTGTA+CGG - Chr5:88295136-88295155 MsG0580028900.01.T01:intron 25.0%
! GTGAATTATTGTTGAATTAC+TGG - Chr5:88289215-88289234 MsG0580028900.01.T01:three_prime_UTR 25.0%
! TAATAAATGACATTGGATGA+CGG + Chr5:88291817-88291836 None:intergenic 25.0%
! TATTCTCATCAATAACTTCA+TGG + Chr5:88290171-88290190 None:intergenic 25.0%
! TATTGGAAATTGGTAAATTG+GGG + Chr5:88289046-88289065 None:intergenic 25.0%
! TGAAATGTTATAACAGAGTT+TGG - Chr5:88290854-88290873 MsG0580028900.01.T01:intron 25.0%
! TGATATTCTTGGTTCATAAA+AGG - Chr5:88293773-88293792 MsG0580028900.01.T01:intron 25.0%
! TTACCATATGAGTTACATAT+GGG - Chr5:88289767-88289786 MsG0580028900.01.T01:CDS 25.0%
! TTCTAATGTTGAATACCTTT+AGG - Chr5:88295551-88295570 MsG0580028900.01.T01:intron 25.0%
! TTTACCATATGAGTTACATA+TGG - Chr5:88289766-88289785 MsG0580028900.01.T01:CDS 25.0%
! TTTATAAGCTACTCTGTATT+TGG + Chr5:88290691-88290710 None:intergenic 25.0%
!! AAACCCTTTTTATTGGAAAT+TGG + Chr5:88289056-88289075 None:intergenic 25.0%
!! AATACTATGTTTTATACCAC+AGG - Chr5:88291428-88291447 MsG0580028900.01.T01:intron 25.0%
!! AGAAGTAGGTCTTATAATTA+GGG - Chr5:88292114-88292133 MsG0580028900.01.T01:intron 25.0%
!! AGCCAAATTTATCAAGATTT+TGG - Chr5:88292395-88292414 MsG0580028900.01.T01:intron 25.0%
!! GTCGAATGAATATCTATTTT+AGG - Chr5:88292488-88292507 MsG0580028900.01.T01:intron 25.0%
!! TAAATACTCAGTTTTCTTCT+GGG + Chr5:88293140-88293159 None:intergenic 25.0%
!! TAATAGAAACACTATCCTTT+TGG + Chr5:88293297-88293316 None:intergenic 25.0%
!! TGAAAATGGTCTTACATTAA+GGG - Chr5:88292078-88292097 MsG0580028900.01.T01:intron 25.0%
!! TTAAATACTCAGTTTTCTTC+TGG + Chr5:88293141-88293160 None:intergenic 25.0%
!! TTATCCCATTGATATTTTGT+TGG - Chr5:88293927-88293946 MsG0580028900.01.T01:intron 25.0%
!! TTGAAAATGGTCTTACATTA+AGG - Chr5:88292077-88292096 MsG0580028900.01.T01:intron 25.0%
!! TTTAAAGCTAAAACTCCTAA+AGG + Chr5:88295569-88295588 None:intergenic 25.0%
!! TTTCACACTTTCAAGATTTT+TGG - Chr5:88292987-88293006 MsG0580028900.01.T01:intron 25.0%
!! TTTTGCTTTAATGACAGATA+AGG - Chr5:88289382-88289401 MsG0580028900.01.T01:three_prime_UTR 25.0%
!!! AATAAGACTTATTTTAGTCC+TGG - Chr5:88293178-88293197 MsG0580028900.01.T01:intron 25.0%
!!! ATAAGTTTTGTTGACTGTTT+GGG - Chr5:88289501-88289520 MsG0580028900.01.T01:CDS 25.0%
!!! CATTGTTACAATTGTTGTTT+TGG - Chr5:88289907-88289926 MsG0580028900.01.T01:CDS 25.0%
!!! GATTTTGAAATTTATCGCTT+TGG - Chr5:88291787-88291806 MsG0580028900.01.T01:intron 25.0%
!!! TTATTTTAGTCCTGGTTAAA+GGG - Chr5:88293186-88293205 MsG0580028900.01.T01:intron 25.0%
AAAACTAGAAGTAAAAGAGG+AGG + Chr5:88291510-88291529 None:intergenic 30.0%
AAAGATTTGTACGGTGATTT+AGG - Chr5:88295145-88295164 MsG0580028900.01.T01:intron 30.0%
AAAGTTTGAATCATAGTGAG+GGG + Chr5:88293754-88293773 None:intergenic 30.0%
AAATCTAAATATCAAGGGTC+GGG + Chr5:88292794-88292813 None:intergenic 30.0%
AAGGTCAATGATTGACAAAT+AGG + Chr5:88291129-88291148 None:intergenic 30.0%
AATAAGCTGTTTATCCAAAC+AGG - Chr5:88290821-88290840 MsG0580028900.01.T01:intron 30.0%
ACAGTCAACAAAACTTATGT+CGG + Chr5:88289499-88289518 None:intergenic 30.0%
ACATAGTTTCAACTGAACAA+TGG + Chr5:88295511-88295530 None:intergenic 30.0%
ACTTGGTTGACATAAGTTAT+AGG - Chr5:88295357-88295376 MsG0580028900.01.T01:intron 30.0%
AGACCCATTTACAAAATTCA+CGG - Chr5:88291901-88291920 MsG0580028900.01.T01:intron 30.0%
AGGAATGAAGGGTAAAAATA+TGG + Chr5:88294334-88294353 None:intergenic 30.0%
AGTTAAATTACCAGGAATGA+AGG + Chr5:88294346-88294365 None:intergenic 30.0%
ATACCCAGGAAAAATGTTAA+GGG + Chr5:88293716-88293735 None:intergenic 30.0%
ATAGTAGTAAGCAAAAACCA+TGG + Chr5:88290960-88290979 None:intergenic 30.0%
ATGACAGAATATTCATGCAA+AGG + Chr5:88290111-88290130 None:intergenic 30.0%
ATTATCAATCAAACTGTCTC+AGG + Chr5:88290513-88290532 None:intergenic 30.0%
ATTCTTGGTTCATAAAAGGA+AGG - Chr5:88293777-88293796 MsG0580028900.01.T01:intron 30.0%
ATTGGAAATTGGTAAATTGG+GGG + Chr5:88289045-88289064 None:intergenic 30.0%
CAAAGTTTGAATCATAGTGA+GGG + Chr5:88293755-88293774 None:intergenic 30.0%
CATAATCATAACTTCTCTCT+CGG + Chr5:88294910-88294929 None:intergenic 30.0%
CATGACCAACAAAATATCAA+TGG + Chr5:88294032-88294051 None:intergenic 30.0%
CGAATAGAGGTTAAATTTGA+CGG - Chr5:88293266-88293285 MsG0580028900.01.T01:intron 30.0%
CTTAGGTCTTAAGATTTCAA+GGG + Chr5:88291098-88291117 None:intergenic 30.0%
GAAGTTATGATTATGATAGG+AGG - Chr5:88294915-88294934 MsG0580028900.01.T01:intron 30.0%
GAATGAAGGGTAAAAATATG+GGG + Chr5:88294332-88294351 None:intergenic 30.0%
GAGATCTTAGAGAAAGAAAT+GGG - Chr5:88293600-88293619 MsG0580028900.01.T01:intron 30.0%
GATGACCAACAAAATATCAA+TGG + Chr5:88293935-88293954 None:intergenic 30.0%
GCATTTAAAAGTTCTCTCTT+AGG - Chr5:88292515-88292534 MsG0580028900.01.T01:intron 30.0%
GCTTATGTATAAGTTTGCAT+AGG + Chr5:88290766-88290785 None:intergenic 30.0%
GGAATGAAGGGTAAAAATAT+GGG + Chr5:88294333-88294352 None:intergenic 30.0%
GTTAAAGGGACACTAATATT+GGG - Chr5:88293200-88293219 MsG0580028900.01.T01:intron 30.0%
GTTAAATTACCAGGAATGAA+GGG + Chr5:88294345-88294364 None:intergenic 30.0%
GTTTCTTAGGGTAAAAAAGT+GGG - Chr5:88294214-88294233 MsG0580028900.01.T01:intron 30.0%
TAAGCTTCATAAAGGATTAG+AGG + Chr5:88293572-88293591 None:intergenic 30.0%
TATACCCAGGAAAAATGTTA+AGG + Chr5:88293717-88293736 None:intergenic 30.0%
TCAAAGTTTGAATCATAGTG+AGG + Chr5:88293756-88293775 None:intergenic 30.0%
TCACATCTATAAGCATGAAT+TGG - Chr5:88290988-88291007 MsG0580028900.01.T01:intron 30.0%
TGAGATCTTAGAGAAAGAAA+TGG - Chr5:88293599-88293618 MsG0580028900.01.T01:intron 30.0%
TGATAAGCACTTCACTTTAA+TGG - Chr5:88289807-88289826 MsG0580028900.01.T01:CDS 30.0%
TGATTTAATTATGGGTCTGT+TGG - Chr5:88290549-88290568 MsG0580028900.01.T01:intron 30.0%
TGCAAAAACCTGATATACAA+AGG + Chr5:88293659-88293678 None:intergenic 30.0%
TGCAAGATGGCTAATTATAA+AGG + Chr5:88290470-88290489 None:intergenic 30.0%
TGCAAGTGAAAGTTTGAAAA+TGG - Chr5:88292064-88292083 MsG0580028900.01.T01:intron 30.0%
TGTGATGAAATGAAAACAGT+AGG - Chr5:88289837-88289856 MsG0580028900.01.T01:CDS 30.0%
TTACATATGGGACTTTACTA+CGG - Chr5:88289779-88289798 MsG0580028900.01.T01:CDS 30.0%
TTATACATAAGCGCTTATCA+TGG - Chr5:88290774-88290793 MsG0580028900.01.T01:intron 30.0%
TTATTCAATCTGCATGTTTC+AGG - Chr5:88291286-88291305 MsG0580028900.01.T01:intron 30.0%
TTCCTAAACTCGATACAAAA+TGG + Chr5:88290429-88290448 None:intergenic 30.0%
TTGACAAAATGTGTAACTGT+TGG - Chr5:88290003-88290022 MsG0580028900.01.T01:CDS 30.0%
TTGTATAAGTCAATCCAAAC+AGG + Chr5:88289467-88289486 None:intergenic 30.0%
! ACATTTTTCATAAGTTCTCC+AGG - Chr5:88289547-88289566 MsG0580028900.01.T01:CDS 30.0%
! ATACCCGTGAATTTTGTAAA+TGG + Chr5:88291908-88291927 None:intergenic 30.0%
! ATTTCCCTTAACATTTTTCC+TGG - Chr5:88293709-88293728 MsG0580028900.01.T01:intron 30.0%
! CTTATTTGAGCTTTATCTAC+TGG - Chr5:88290576-88290595 MsG0580028900.01.T01:intron 30.0%
! GAGAAGTAGGTCTTATAATT+AGG - Chr5:88292113-88292132 MsG0580028900.01.T01:intron 30.0%
! TAACATTTTTCCTGGGTATA+GGG - Chr5:88293717-88293736 MsG0580028900.01.T01:intron 30.0%
! TAAGAAAAAGTACGACATCA+AGG + Chr5:88292281-88292300 None:intergenic 30.0%
! TACATTTTCTGACTCAATCA+TGG - Chr5:88290040-88290059 MsG0580028900.01.T01:CDS 30.0%
! TACCCGTGAATTTTGTAAAT+GGG + Chr5:88291907-88291926 None:intergenic 30.0%
! TGATTCCTTATGTTGGTTAT+AGG - Chr5:88291672-88291691 MsG0580028900.01.T01:intron 30.0%
! TGTGCTGACAACAAAATAAA+AGG + Chr5:88294125-88294144 None:intergenic 30.0%
! TTAACATTTTTCCTGGGTAT+AGG - Chr5:88293716-88293735 MsG0580028900.01.T01:intron 30.0%
! TTCCATGAAAAAGAGCATAT+TGG - Chr5:88295305-88295324 MsG0580028900.01.T01:intron 30.0%
! TTCCTCATCATCACATATTT+TGG - Chr5:88292946-88292965 MsG0580028900.01.T01:CDS 30.0%
! TTGATATTTTGTTGGTCATC+TGG - Chr5:88293935-88293954 MsG0580028900.01.T01:intron 30.0%
! TTGGTATTTATGTTTTGCTG+TGG - Chr5:88292414-88292433 MsG0580028900.01.T01:intron 30.0%
! TTTCCCTTAACATTTTTCCT+GGG - Chr5:88293710-88293729 MsG0580028900.01.T01:intron 30.0%
! TTTTGTACCTTTGCTTGATA+TGG - Chr5:88292329-88292348 MsG0580028900.01.T01:intron 30.0%
! TTTTTCATGGAACAGTTATC+CGG + Chr5:88295297-88295316 None:intergenic 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG - Chr5:88290600-88290619 MsG0580028900.01.T01:intron 30.0%
!! ATATTTTTACCCTTCATTCC+TGG - Chr5:88294333-88294352 MsG0580028900.01.T01:intron 30.0%
!! ATCCAATATGCTCTTTTTCA+TGG + Chr5:88295310-88295329 None:intergenic 30.0%
!! GTAAATGGGTCTTATTGTAA+GGG + Chr5:88291893-88291912 None:intergenic 30.0%
!! TAAGTTTTGTGAGACTGTTT+GGG - Chr5:88290601-88290620 MsG0580028900.01.T01:intron 30.0%
!! TGTAAATGGGTCTTATTGTA+AGG + Chr5:88291894-88291913 None:intergenic 30.0%
!! TTTCTTTCTCTAAGATCTCA+AGG + Chr5:88293599-88293618 None:intergenic 30.0%
!! TTTTATGAAAGTGTGCTTTC+TGG - Chr5:88292692-88292711 MsG0580028900.01.T01:intron 30.0%
!! TTTTTCAAAAATCGCCAACT+TGG + Chr5:88291062-88291081 None:intergenic 30.0%
!!! ACTTCTAGTTTTCATGAAGT+AGG - Chr5:88291518-88291537 MsG0580028900.01.T01:intron 30.0%
!!! ATTTTGTCAATGTTGACTCT+CGG + Chr5:88289993-88290012 None:intergenic 30.0%
!!! CACTTTTTTACCCTAAGAAA+CGG + Chr5:88294215-88294234 None:intergenic 30.0%
!!! CATAAGTTTTGTTGACTGTT+TGG - Chr5:88289500-88289519 MsG0580028900.01.T01:CDS 30.0%
!!! CTTATTTTAGTCCTGGTTAA+AGG - Chr5:88293185-88293204 MsG0580028900.01.T01:intron 30.0%
!!! GCTTTGTTTTCTTTTGTTGT+AGG - Chr5:88289939-88289958 MsG0580028900.01.T01:CDS 30.0%
!!! TATTTTGGAGTAACAGTATG+AGG - Chr5:88292961-88292980 MsG0580028900.01.T01:CDS 30.0%
AAAACAAGAAAATGATGCCG+TGG + Chr5:88293091-88293110 None:intergenic 35.0%
AAAACTTATGTCGGTGGATA+AGG + Chr5:88289490-88289509 None:intergenic 35.0%
AAAATGATGCCGTGGTAAAA+AGG + Chr5:88293083-88293102 None:intergenic 35.0%
AAAGAAAACGCGGAAGAAAT+TGG + Chr5:88288996-88289015 None:intergenic 35.0%
AACCAATCTCTTCGTGTAAT+TGG - Chr5:88288959-88288978 MsG0580028900.01.T01:three_prime_UTR 35.0%
AAGTGGGTAATTATCTCTTC+TGG - Chr5:88294230-88294249 MsG0580028900.01.T01:intron 35.0%
AATCTAAATATCAAGGGTCG+GGG + Chr5:88292793-88292812 None:intergenic 35.0%
AATCTTAAGACCTAAGGTTC+TGG - Chr5:88291102-88291121 MsG0580028900.01.T01:intron 35.0%
AATTTGACGGAAACACCAAA+AGG - Chr5:88293279-88293298 MsG0580028900.01.T01:intron 35.0%
ACAGATATTATGACCGAGAT+AGG - Chr5:88294801-88294820 MsG0580028900.01.T01:intron 35.0%
ACATAATGACTTATAAGGCC+AGG - Chr5:88292818-88292837 MsG0580028900.01.T01:intron 35.0%
ACATGGAAAGAATTCCTAGA+AGG - Chr5:88295188-88295207 MsG0580028900.01.T01:intron 35.0%
AGCGAAGAACATAATAGAAC+TGG + Chr5:88289887-88289906 None:intergenic 35.0%
AGTCCCATATGTAACTCATA+TGG + Chr5:88289773-88289792 None:intergenic 35.0%
ATATTAGTGTCCCTTTAACC+AGG + Chr5:88293199-88293218 None:intergenic 35.0%
ATCCGAAATTTCCAACACTA+AGG + Chr5:88289707-88289726 None:intergenic 35.0%
ATGCAGATTGAATAAGAAGC+AGG + Chr5:88291281-88291300 None:intergenic 35.0%
ATTCCTAGAAGGGATAATAG+TGG - Chr5:88295199-88295218 MsG0580028900.01.T01:intron 35.0%
ATTGGGGGATAATTGAGATT+TGG + Chr5:88289030-88289049 None:intergenic 35.0%
CAATTTGATTACTCAAGTGC+AGG + Chr5:88293228-88293247 None:intergenic 35.0%
CATAATGACTTATAAGGCCA+GGG - Chr5:88292819-88292838 MsG0580028900.01.T01:intron 35.0%
CATGAATTGGCGAGATTATA+GGG - Chr5:88291001-88291020 MsG0580028900.01.T01:intron 35.0%
CATGGAAAGAATTCCTAGAA+GGG - Chr5:88295189-88295208 MsG0580028900.01.T01:intron 35.0%
CATTGCCTTTCATTATCACT+TGG - Chr5:88295340-88295359 MsG0580028900.01.T01:intron 35.0%
CCTTAGGTCTTAAGATTTCA+AGG + Chr5:88291099-88291118 None:intergenic 35.0%
CCTTGAAATCTTAAGACCTA+AGG - Chr5:88291096-88291115 MsG0580028900.01.T01:intron 35.0%
CGTTTCTTAGGGTAAAAAAG+TGG - Chr5:88294213-88294232 MsG0580028900.01.T01:intron 35.0%
CTCATGAAAATGGACCAAAA+TGG + Chr5:88291038-88291057 None:intergenic 35.0%
CTCTTATGTAAGGAGAATCA+GGG + Chr5:88290318-88290337 None:intergenic 35.0%
GAATGGATGATACACAAGAT+GGG + Chr5:88293443-88293462 None:intergenic 35.0%
GACCCATTTACAAAATTCAC+GGG - Chr5:88291902-88291921 MsG0580028900.01.T01:intron 35.0%
GATAATGAAAGGCAATGCAA+AGG + Chr5:88295337-88295356 None:intergenic 35.0%
GCTCTATTGTGTACTATGTT+TGG - Chr5:88291351-88291370 MsG0580028900.01.T01:intron 35.0%
GGTTAAAGGGACACTAATAT+TGG - Chr5:88293199-88293218 MsG0580028900.01.T01:intron 35.0%
GTAAAACGCCTTTGTATATC+AGG - Chr5:88293648-88293667 MsG0580028900.01.T01:intron 35.0%
GTCTTATAATTAGGGATGGA+TGG - Chr5:88292122-88292141 MsG0580028900.01.T01:intron 35.0%
TACATATGGGACTTTACTAC+GGG - Chr5:88289780-88289799 MsG0580028900.01.T01:CDS 35.0%
TACCAATTACACGAAGAGAT+TGG + Chr5:88288964-88288983 None:intergenic 35.0%
TATCCCTTTCAGGATATTCA+CGG + Chr5:88294718-88294737 None:intergenic 35.0%
TCAGAATCAAAAACTCGCTA+GGG - Chr5:88288920-88288939 MsG0580028900.01.T01:three_prime_UTR 35.0%
TCATATGCAAGAAGAGATTC+TGG - Chr5:88293835-88293854 MsG0580028900.01.T01:intron 35.0%
TCATATGGTAAATGCTTGCA+GGG + Chr5:88289758-88289777 None:intergenic 35.0%
TCCAACCTATAACCAACATA+AGG + Chr5:88291680-88291699 None:intergenic 35.0%
TCTAGGAATTCTTTCCATGT+TGG + Chr5:88295188-88295207 None:intergenic 35.0%
TCTTATGTAAGGAGAATCAG+GGG + Chr5:88290317-88290336 None:intergenic 35.0%
TGAATATCCTGAAAGGGATA+GGG - Chr5:88294718-88294737 MsG0580028900.01.T01:intron 35.0%
TGATTCTCCTTACATAAGAG+CGG - Chr5:88290318-88290337 MsG0580028900.01.T01:intron 35.0%
TGCAGACTCACAAGATAAAA+TGG + Chr5:88291651-88291670 None:intergenic 35.0%
TTCAAGAAATAGAGCCTGTT+TGG + Chr5:88290838-88290857 None:intergenic 35.0%
TTGGGGGATAATTGAGATTT+GGG + Chr5:88289029-88289048 None:intergenic 35.0%
TTGTTGAATCATCAAAGCCA+AGG - Chr5:88290896-88290915 MsG0580028900.01.T01:intron 35.0%
TTTATCTCCTCTTCTTTCTG+AGG - Chr5:88293480-88293499 MsG0580028900.01.T01:intron 35.0%
TTTCAACTGAACAATGGACA+TGG + Chr5:88295505-88295524 None:intergenic 35.0%
TTTCATGAAGTAGGAATGCT+TGG - Chr5:88291527-88291546 MsG0580028900.01.T01:intron 35.0%
TTTCTAAACTCACTACACCT+AGG - Chr5:88293112-88293131 MsG0580028900.01.T01:intron 35.0%
TTTCTCTAGCAAGACTCAAT+TGG + Chr5:88290086-88290105 None:intergenic 35.0%
! AACTGATGATGCTTTCTTTC+AGG - Chr5:88292588-88292607 MsG0580028900.01.T01:intron 35.0%
! AAGTCTAAAACTTGCAAAGC+AGG + Chr5:88295454-88295473 None:intergenic 35.0%
! ACGACATCAGATTATTGACT+TGG + Chr5:88295592-88295611 None:intergenic 35.0%
! AGCCTTAGTGTTGGAAATTT+CGG - Chr5:88289702-88289721 MsG0580028900.01.T01:CDS 35.0%
! AGTCTAAAACTTGCAAAGCA+GGG + Chr5:88295453-88295472 None:intergenic 35.0%
! AGTGTTGGAAATTTCGGATT+CGG - Chr5:88289708-88289727 MsG0580028900.01.T01:CDS 35.0%
! ATCTATGAGGGTTTTCGTTA+TGG - Chr5:88292247-88292266 MsG0580028900.01.T01:intron 35.0%
! CACCATTTTGTATCGAGTTT+AGG - Chr5:88290424-88290443 MsG0580028900.01.T01:intron 35.0%
! CTATGTTTTATACCACAGGT+TGG - Chr5:88291432-88291451 MsG0580028900.01.T01:intron 35.0%
! CTCCAAAATATGTGATGATG+AGG + Chr5:88292951-88292970 None:intergenic 35.0%
! GAATTTTCTCCTGGATCTAA+TGG - Chr5:88292610-88292629 MsG0580028900.01.T01:intron 35.0%
! GTAGGTCTTATAATTAGGGA+TGG - Chr5:88292118-88292137 MsG0580028900.01.T01:intron 35.0%
! GTCAACCAAGTGATAATGAA+AGG + Chr5:88295348-88295367 None:intergenic 35.0%
! GTCTTATTGTAAGGGATGAA+GGG + Chr5:88291885-88291904 None:intergenic 35.0%
! TCCTTATGTTGGTTATAGGT+TGG - Chr5:88291676-88291695 MsG0580028900.01.T01:intron 35.0%
! TGTTTCCCCTGCAAATTTTA+GGG - Chr5:88293545-88293564 MsG0580028900.01.T01:intron 35.0%
! TTCTTTCAGGAATTTTCTCC+TGG - Chr5:88292601-88292620 MsG0580028900.01.T01:intron 35.0%
! TTGTTTCCCCTGCAAATTTT+AGG - Chr5:88293544-88293563 MsG0580028900.01.T01:intron 35.0%
! TTTAGTTGGCGGATCAAAAT+AGG - Chr5:88293412-88293431 MsG0580028900.01.T01:intron 35.0%
!! ATGTTTTGCTGTGGCTTATA+TGG - Chr5:88292423-88292442 MsG0580028900.01.T01:intron 35.0%
!! CATTTTGGTCCATTTTCATG+AGG - Chr5:88291036-88291055 MsG0580028900.01.T01:intron 35.0%
!! GAATACAATCAAGTTGATCG+TGG - Chr5:88290186-88290205 MsG0580028900.01.T01:CDS 35.0%
!! GGTTGATATTTTAGAGAGCT+TGG - Chr5:88291233-88291252 MsG0580028900.01.T01:intron 35.0%
!! TACTGGACAGTTCTGAAATT+TGG - Chr5:88289232-88289251 MsG0580028900.01.T01:three_prime_UTR 35.0%
!! TCTGCATTGATTCCTTATGT+TGG - Chr5:88291665-88291684 MsG0580028900.01.T01:intron 35.0%
!!! AGTTTTTGATTCTGAGGCTT+AGG + Chr5:88288915-88288934 None:intergenic 35.0%
!!! TAGGCAGTGCATATTTTAGT+TGG - Chr5:88293398-88293417 MsG0580028900.01.T01:intron 35.0%
!!! TCAGTGCCATTTTTTTCATG+AGG + Chr5:88294656-88294675 None:intergenic 35.0%
AAACTCCCTACTACACATTG+TGG - Chr5:88294479-88294498 MsG0580028900.01.T01:CDS 40.0%
AAAGATAACGAACCTGTCCA+AGG + Chr5:88292675-88292694 None:intergenic 40.0%
AAGAAGACAGAAAGCAGTGA+AGG + Chr5:88290241-88290260 None:intergenic 40.0%
AAGGGATAATAGTGGTGAAG+AGG - Chr5:88295207-88295226 MsG0580028900.01.T01:intron 40.0%
AATAGTAGAAAGAGGGGACA+AGG + Chr5:88289127-88289146 None:intergenic 40.0%
ACAAATAGGTCCAGAACCTT+AGG + Chr5:88291115-88291134 None:intergenic 40.0%
ACATTTGATATGTTCGGGCA+CGG + Chr5:88289735-88289754 None:intergenic 40.0%
ACCTCATCATCCTTTGCATA+TGG + Chr5:88291757-88291776 None:intergenic 40.0%
ACTTGCATTCCACTTACCTT+TGG - Chr5:88295792-88295811 MsG0580028900.01.T01:five_prime_UTR 40.0%
AGAATGCTTGTATCTGATGC+CGG - Chr5:88295275-88295294 MsG0580028900.01.T01:intron 40.0%
AGAGGACCCTAAAATTTGCA+GGG + Chr5:88293554-88293573 None:intergenic 40.0%
AGGGAGGAAATTAGTAACGT+AGG - Chr5:88293379-88293398 MsG0580028900.01.T01:intron 40.0%
ATAGTAGAAAGAGGGGACAA+GGG + Chr5:88289126-88289145 None:intergenic 40.0%
ATCATGGAGATACAGACTTC+TGG - Chr5:88290056-88290075 MsG0580028900.01.T01:CDS 40.0%
ATGCTGAAAGATACAGGGAT+CGG - Chr5:88294837-88294856 MsG0580028900.01.T01:intron 40.0%
ATTGAATAAGAAGCAGGACG+TGG + Chr5:88291275-88291294 None:intergenic 40.0%
CAAAGTCAAATTCCAACCTG+TGG + Chr5:88291447-88291466 None:intergenic 40.0%
CAATGCTGTTGTCATAATCC+CGG + Chr5:88294967-88294986 None:intergenic 40.0%
CAGGGACATTTGATATGTTC+GGG + Chr5:88289740-88289759 None:intergenic 40.0%
CATAGCTCCATATCAAGCAA+AGG + Chr5:88292339-88292358 None:intergenic 40.0%
CCTGCTCCTCATGAAAAAAA+TGG - Chr5:88294647-88294666 MsG0580028900.01.T01:five_prime_UTR 40.0%
CTACATACCGCTCTTATGTA+AGG + Chr5:88290328-88290347 None:intergenic 40.0%
CTCAGAATCAAAAACTCGCT+AGG - Chr5:88288919-88288938 MsG0580028900.01.T01:three_prime_UTR 40.0%
CTCATATGGTAAATGCTTGC+AGG + Chr5:88289759-88289778 None:intergenic 40.0%
CTGACCAAAAGAGACTGAAA+GGG + Chr5:88294573-88294592 None:intergenic 40.0%
CTTATGCATAAGTGCCTGTT+TGG - Chr5:88289450-88289469 MsG0580028900.01.T01:CDS 40.0%
GAAGAGGTTATTAGACTTGG+TGG - Chr5:88295223-88295242 MsG0580028900.01.T01:intron 40.0%
GCAGGGACATTTGATATGTT+CGG + Chr5:88289741-88289760 None:intergenic 40.0%
GCATGAATTGGCGAGATTAT+AGG - Chr5:88291000-88291019 MsG0580028900.01.T01:intron 40.0%
GCTCTTATGTAAGGAGAATC+AGG + Chr5:88290319-88290338 None:intergenic 40.0%
GGAATGGATGATACACAAGA+TGG + Chr5:88293444-88293463 None:intergenic 40.0%
GGTAAAAATATGGGGCAACA+GGG + Chr5:88294324-88294343 None:intergenic 40.0%
GGTGAAGAGGTTATTAGACT+TGG - Chr5:88295220-88295239 MsG0580028900.01.T01:intron 40.0%
GGTGATTTAGGTGAAAGCAA+AGG - Chr5:88295157-88295176 MsG0580028900.01.T01:intron 40.0%
GTCAACAAAACTTATGTCGG+TGG + Chr5:88289496-88289515 None:intergenic 40.0%
GTGAATATCCTGAAAGGGAT+AGG - Chr5:88294717-88294736 MsG0580028900.01.T01:intron 40.0%
TACATAAGAGCGGTATGTAG+AGG - Chr5:88290328-88290347 MsG0580028900.01.T01:intron 40.0%
TAGAGGACCCTAAAATTTGC+AGG + Chr5:88293555-88293574 None:intergenic 40.0%
TAGGTTTGGGTAATCGAAAG+AGG + Chr5:88288896-88288915 None:intergenic 40.0%
TCACCACTATTATCCCTTCT+AGG + Chr5:88295205-88295224 None:intergenic 40.0%
TCGTACCACAATGTGTAGTA+GGG + Chr5:88294487-88294506 None:intergenic 40.0%
TGCTGTCTAGATGCAAATGA+TGG - Chr5:88295639-88295658 MsG0580028900.01.T01:intron 40.0%
TGGGTAATTATCTCTTCTGG+CGG - Chr5:88294233-88294252 MsG0580028900.01.T01:intron 40.0%
TTATGACCGAGATAGGAACA+AGG - Chr5:88294808-88294827 MsG0580028900.01.T01:intron 40.0%
TTCTTACTTCCATCTCTCTG+TGG + Chr5:88295094-88295113 None:intergenic 40.0%
TTGAATAAGAAGCAGGACGT+GGG + Chr5:88291274-88291293 None:intergenic 40.0%
TTTCTCCTGGATCTAATGGA+CGG - Chr5:88292614-88292633 MsG0580028900.01.T01:intron 40.0%
! GTTGCGAGTGTTGTGAATTT+AGG - Chr5:88291466-88291485 MsG0580028900.01.T01:intron 40.0%
!! CTAGCGAGTTTTTGATTCTG+AGG + Chr5:88288921-88288940 None:intergenic 40.0%
!! GCTGTTTTCATAAGCTATCC+TGG + Chr5:88289568-88289587 None:intergenic 40.0%
!! GGTCTTATTGTAAGGGATGA+AGG + Chr5:88291886-88291905 None:intergenic 40.0%
!! TATATCCGTGATTTGCTCCT+TGG - Chr5:88292655-88292674 MsG0580028900.01.T01:intron 40.0%
!! TATGACAACAGCATTGGCAA+TGG - Chr5:88294971-88294990 MsG0580028900.01.T01:intron 40.0%
!! TATTTTAGAGAGCTTGGCTG+TGG - Chr5:88291239-88291258 MsG0580028900.01.T01:intron 40.0%
!! TGATTCTGAGGCTTAGGTTT+GGG + Chr5:88288909-88288928 None:intergenic 40.0%
!! TGCATGTTTCAGGTTGTTTG+TGG - Chr5:88291296-88291315 MsG0580028900.01.T01:intron 40.0%
!! TTGATTCTGAGGCTTAGGTT+TGG + Chr5:88288910-88288929 None:intergenic 40.0%
!!! CCATTTTTTTCATGAGGAGC+AGG + Chr5:88294650-88294669 None:intergenic 40.0%
!!! GCAGTGCATATTTTAGTTGG+CGG - Chr5:88293401-88293420 MsG0580028900.01.T01:intron 40.0%
AAAGGGATAGGGAACGTGAT+AGG - Chr5:88294777-88294796 MsG0580028900.01.T01:intron 45.0%
AAGCAAAGGAGATGCCAACA+TGG - Chr5:88295171-88295190 MsG0580028900.01.T01:intron 45.0%
AAGGGATAGGGAACGTGATA+GGG - Chr5:88294778-88294797 MsG0580028900.01.T01:intron 45.0%
AATGGACGGATGACTACGAT+GGG - Chr5:88292628-88292647 MsG0580028900.01.T01:intron 45.0%
ACCGAGATGCTGAAAGATAC+AGG - Chr5:88294831-88294850 MsG0580028900.01.T01:intron 45.0%
ACTACACATTGTGGTACGAC+AGG - Chr5:88294488-88294507 MsG0580028900.01.T01:CDS 45.0%
AGAGCCGTGAATATCCTGAA+AGG - Chr5:88294711-88294730 MsG0580028900.01.T01:intron 45.0%
AGCTCAACCTCAGAAAGAAG+AGG + Chr5:88293490-88293509 None:intergenic 45.0%
ATCAACGCTCACCGTTTCTT+AGG - Chr5:88294201-88294220 MsG0580028900.01.T01:intron 45.0%
ATGCTGATCCAAAGACTCTG+TGG - Chr5:88291719-88291738 MsG0580028900.01.T01:intron 45.0%
CAGACGAAATCAGGGATAGA+TGG - Chr5:88290919-88290938 MsG0580028900.01.T01:intron 45.0%
CCAACTTGGCCTCATGAAAA+TGG + Chr5:88291048-88291067 None:intergenic 45.0%
CCCTGTATCTTTCAGCATCT+CGG + Chr5:88294835-88294854 None:intergenic 45.0%
CCGAGATGCTGAAAGATACA+GGG - Chr5:88294832-88294851 MsG0580028900.01.T01:intron 45.0%
CGAAATCAGGGATAGATGGT+AGG - Chr5:88290923-88290942 MsG0580028900.01.T01:intron 45.0%
CGGGATTATGACAACAGCAT+TGG - Chr5:88294965-88294984 MsG0580028900.01.T01:intron 45.0%
CTACACATTGTGGTACGACA+GGG - Chr5:88294489-88294508 MsG0580028900.01.T01:CDS 45.0%
CTTTCACAGAAGGTGGTCTA+CGG + Chr5:88294547-88294566 None:intergenic 45.0%
GAGCCGTGAATATCCTGAAA+GGG - Chr5:88294712-88294731 MsG0580028900.01.T01:intron 45.0%
GAGGACCCTAAAATTTGCAG+GGG + Chr5:88293553-88293572 None:intergenic 45.0%
GCCATATGCAAAGGATGATG+AGG - Chr5:88291753-88291772 MsG0580028900.01.T01:intron 45.0%
GCGAGATTATAGGGATCACT+TGG - Chr5:88291010-88291029 MsG0580028900.01.T01:intron 45.0%
GCTGACCAAAAGAGACTGAA+AGG + Chr5:88294574-88294593 None:intergenic 45.0%
GCTGATATCAGATGTGGTTG+TGG - Chr5:88291212-88291231 MsG0580028900.01.T01:intron 45.0%
GGCACTTATGCATAAGTGTG+TGG + Chr5:88289446-88289465 None:intergenic 45.0%
GGGTAAAAATATGGGGCAAC+AGG + Chr5:88294325-88294344 None:intergenic 45.0%
GGTAGGATTGAACACTTCCA+TGG - Chr5:88290940-88290959 MsG0580028900.01.T01:intron 45.0%
GTCGTACCACAATGTGTAGT+AGG + Chr5:88294488-88294507 None:intergenic 45.0%
GTGGTGCTCAACTGAATTCT+TGG - Chr5:88291315-88291334 MsG0580028900.01.T01:intron 45.0%
GTGTAACTGTTGGAGTGAGA+GGG - Chr5:88290013-88290032 MsG0580028900.01.T01:CDS 45.0%
TACACATTGTGGTACGACAG+GGG - Chr5:88294490-88294509 MsG0580028900.01.T01:CDS 45.0%
TCAACGCTCACCGTTTCTTA+GGG - Chr5:88294202-88294221 MsG0580028900.01.T01:intron 45.0%
TCACTGTCAAGCAGATGCAT+GGG - Chr5:88290282-88290301 MsG0580028900.01.T01:intron 45.0%
TCCAAACAGAGCCTTAGTGT+TGG - Chr5:88289693-88289712 MsG0580028900.01.T01:CDS 45.0%
TCCAACACTAAGGCTCTGTT+TGG + Chr5:88289697-88289716 None:intergenic 45.0%
TCTAGCAAGACTCAATTGGC+CGG + Chr5:88290082-88290101 None:intergenic 45.0%
TGCTGAAAGATACAGGGATC+GGG - Chr5:88294838-88294857 MsG0580028900.01.T01:intron 45.0%
TGTAACTGTTGGAGTGAGAG+GGG - Chr5:88290014-88290033 MsG0580028900.01.T01:CDS 45.0%
TGTGTAACTGTTGGAGTGAG+AGG - Chr5:88290012-88290031 MsG0580028900.01.T01:CDS 45.0%
TTCTTCACCCATTCGTCGTA+CGG - Chr5:88294622-88294641 MsG0580028900.01.T01:five_prime_UTR 45.0%
TTGCATTCTTGTGATGCACC+TGG + Chr5:88292915-88292934 None:intergenic 45.0%
TTTCACAGAAGGTGGTCTAC+GGG + Chr5:88294546-88294565 None:intergenic 45.0%
! AGTTTGGCTTAGTGCGTTAG+TGG - Chr5:88290870-88290889 MsG0580028900.01.T01:intron 45.0%
! CCATTTTCATGAGGCCAAGT+TGG - Chr5:88291045-88291064 MsG0580028900.01.T01:intron 45.0%
! CTGGTTTGAGCCATATGCAA+AGG - Chr5:88291744-88291763 MsG0580028900.01.T01:intron 45.0%
! GGGATCACTTGGATCCATTT+TGG - Chr5:88291021-88291040 MsG0580028900.01.T01:intron 45.0%
! GTGTGGTGAATTTTGCAGCT+AGG + Chr5:88289429-88289448 None:intergenic 45.0%
! TAATGGACGGATGACTACGA+TGG - Chr5:88292627-88292646 MsG0580028900.01.T01:intron 45.0%
!! ACAGCATTGGCAATGGTAGT+AGG - Chr5:88294978-88294997 MsG0580028900.01.T01:intron 45.0%
!! CAGTTTTCTTCTGGGAACCT+AGG + Chr5:88293132-88293151 None:intergenic 45.0%
!! TCAAGTTGATCGTGGAACCA+TGG - Chr5:88290194-88290213 MsG0580028900.01.T01:CDS 45.0%
!! TTAGACTTGGTGGCTCTTCT+TGG - Chr5:88295233-88295252 MsG0580028900.01.T01:intron 45.0%
!! TTGTCAATGTTGACTCTCGG+CGG + Chr5:88289990-88290009 None:intergenic 45.0%
!! TTTTGGGAGACTGCGAATAG+AGG - Chr5:88293253-88293272 MsG0580028900.01.T01:intron 45.0%
AAAGATACAGGGATCGGGAC+CGG - Chr5:88294843-88294862 MsG0580028900.01.T01:intron 50.0%
AACCAGCTCCACAGAGTCTT+TGG + Chr5:88291730-88291749 None:intergenic 50.0%
AAGCCAAGGCAGACGAAATC+AGG - Chr5:88290910-88290929 MsG0580028900.01.T01:intron 50.0%
ACACGGGCGTACAGATTACA+AGG + Chr5:88291153-88291172 None:intergenic 50.0%
ACCTGACGCATTACAGGAAC+TGG + Chr5:88294437-88294456 None:intergenic 50.0%
ACGCAGAGAGAGAAAGTAGC+CGG - Chr5:88294945-88294964 MsG0580028900.01.T01:intron 50.0%
ACTATGAGAGGGACAGATCC+AGG - Chr5:88294873-88294892 MsG0580028900.01.T01:intron 50.0%
AGCCAAGGCAGACGAAATCA+GGG - Chr5:88290911-88290930 MsG0580028900.01.T01:intron 50.0%
AGTGTCATCAGAACCGTGAC+GGG + Chr5:88294522-88294541 None:intergenic 50.0%
ATAAGAAGCAGGACGTGGGA+AGG + Chr5:88291270-88291289 None:intergenic 50.0%
ATCCAAAGACTCTGTGGAGC+TGG - Chr5:88291725-88291744 MsG0580028900.01.T01:intron 50.0%
ATCCCTGATTTCGTCTGCCT+TGG + Chr5:88290916-88290935 None:intergenic 50.0%
ATCCTGAAAGGGATAGGGAC+AGG - Chr5:88294723-88294742 MsG0580028900.01.T01:intron 50.0%
ATCCTGTAATGCCCACCTGT+CGG - Chr5:88293624-88293643 MsG0580028900.01.T01:intron 50.0%
ATCGTGGAACCATGGATGAC+GGG - Chr5:88290202-88290221 MsG0580028900.01.T01:CDS 50.0%
ATTACAGGAACTGGGATGCG+AGG + Chr5:88294428-88294447 None:intergenic 50.0%
CACATCTGATATCAGCCCAC+GGG + Chr5:88291208-88291227 None:intergenic 50.0%
CACGGGCGTACAGATTACAA+GGG + Chr5:88291152-88291171 None:intergenic 50.0%
CACGTTCCCTATCCCTTTCT+CGG + Chr5:88294775-88294794 None:intergenic 50.0%
CAGTGTCATCAGAACCGTGA+CGG + Chr5:88294523-88294542 None:intergenic 50.0%
CCACATCTGATATCAGCCCA+CGG + Chr5:88291209-88291228 None:intergenic 50.0%
CCTGACGCATTACAGGAACT+GGG + Chr5:88294436-88294455 None:intergenic 50.0%
CCTGTCCAAGGAGCAAATCA+CGG + Chr5:88292663-88292682 None:intergenic 50.0%
CTCACTGTCAAGCAGATGCA+TGG - Chr5:88290281-88290300 MsG0580028900.01.T01:intron 50.0%
CTCGGTCCTTGTTCCTATCT+CGG + Chr5:88294817-88294836 None:intergenic 50.0%
CTCTGACTGCGATGATTGCT+GGG + Chr5:88294695-88294714 None:intergenic 50.0%
CTGCTTGACAGTGAGCTTCA+TGG + Chr5:88290276-88290295 None:intergenic 50.0%
CTTGTAATCTGTACGCCCGT+GGG - Chr5:88291151-88291170 MsG0580028900.01.T01:intron 50.0%
CTTGTGATGCACCTGGATTC+TGG + Chr5:88292908-88292927 None:intergenic 50.0%
GAAAGGGCAGCTTTCACAGA+AGG + Chr5:88294557-88294576 None:intergenic 50.0%
GAGCTCTACTACCAGAATCC+AGG - Chr5:88292894-88292913 MsG0580028900.01.T01:intron 50.0%
GATCGTGGAACCATGGATGA+CGG - Chr5:88290201-88290220 MsG0580028900.01.T01:CDS 50.0%
GGCGTACAGATTACAAGGGA+AGG + Chr5:88291148-88291167 None:intergenic 50.0%
GGGTGAAGAATCCCTTGTAG+AGG + Chr5:88294612-88294631 None:intergenic 50.0%
GTAGGAGTCGGAGTAGAAGT+AGG - Chr5:88295011-88295030 MsG0580028900.01.T01:intron 50.0%
GTCATCCGTCCATTAGATCC+AGG + Chr5:88292622-88292641 None:intergenic 50.0%
TCCTGAAAGGGATAGGGACA+GGG - Chr5:88294724-88294743 MsG0580028900.01.T01:intron 50.0%
TGGAGATACAGACTTCTGGC+CGG - Chr5:88290060-88290079 MsG0580028900.01.T01:CDS 50.0%
! GCTGCCCTTTCAGTCTCTTT+TGG - Chr5:88294566-88294585 MsG0580028900.01.T01:five_prime_UTR 50.0%
! TCCTGTAATGCGTCAGGTTG+TGG - Chr5:88294439-88294458 MsG0580028900.01.T01:CDS 50.0%
!! TGCCAACTTGGCTCTGACTT+CGG + Chr5:88295045-88295064 None:intergenic 50.0%
!!! CAAAGGCGTTTTACACCGAC+AGG + Chr5:88293642-88293661 None:intergenic 50.0%
AAAGGGATAGGGACAGGGAG+CGG - Chr5:88294729-88294748 MsG0580028900.01.T01:intron 55.0%
AAGATACAGGGATCGGGACC+GGG - Chr5:88294844-88294863 MsG0580028900.01.T01:intron 55.0%
ACAGGGACCGAGAAAGGGAT+AGG - Chr5:88294765-88294784 MsG0580028900.01.T01:intron 55.0%
ACCGGGATAGGGACTATGAG+AGG - Chr5:88294861-88294880 MsG0580028900.01.T01:intron 55.0%
AGCCGAAGTCAGAGCCAAGT+TGG - Chr5:88295040-88295059 MsG0580028900.01.T01:intron 55.0%
AGGGCAGCTTTCACAGAAGG+TGG + Chr5:88294554-88294573 None:intergenic 55.0%
ATGAGAGGGACAGATCCAGG+AGG - Chr5:88294876-88294895 MsG0580028900.01.T01:intron 55.0%
CAGGGACCGAGAAAGGGATA+GGG - Chr5:88294766-88294785 MsG0580028900.01.T01:intron 55.0%
CCACGGGCGTACAGATTACA+AGG + Chr5:88291192-88291211 None:intergenic 55.0%
CCCAGTTCCTGTAATGCGTC+AGG - Chr5:88294433-88294452 MsG0580028900.01.T01:CDS 55.0%
CCCTCTCATAGTCCCTATCC+CGG + Chr5:88294865-88294884 None:intergenic 55.0%
CCGGGATAGGGACTATGAGA+GGG - Chr5:88294862-88294881 MsG0580028900.01.T01:intron 55.0%
CCTTGTAATCTGTACGCCCG+TGG - Chr5:88291150-88291169 MsG0580028900.01.T01:intron 55.0%
CGCAGAGAGAGAAAGTAGCC+GGG - Chr5:88294946-88294965 MsG0580028900.01.T01:intron 55.0%
CGCTCTAGTCCACAGAGAGA+TGG - Chr5:88295082-88295101 MsG0580028900.01.T01:intron 55.0%
GAAGGTCGATAGCAGCACAC+GGG + Chr5:88291169-88291188 None:intergenic 55.0%
GCCACAACCTGACGCATTAC+AGG + Chr5:88294443-88294462 None:intergenic 55.0%
GCCACATCGAGCCTCTACAA+GGG - Chr5:88294598-88294617 MsG0580028900.01.T01:five_prime_UTR 55.0%
GCTCTGACTGCGATGATTGC+TGG + Chr5:88294696-88294715 None:intergenic 55.0%
GGAAGGTCGATAGCAGCACA+CGG + Chr5:88291170-88291189 None:intergenic 55.0%
GGACAGATCCAGGAGGGATA+GGG - Chr5:88294883-88294902 MsG0580028900.01.T01:intron 55.0%
GTCGGAGTAGAAGTAGGAGC+AGG - Chr5:88295017-88295036 MsG0580028900.01.T01:intron 55.0%
TACTCCGACTCCTACTGCGA+TGG + Chr5:88295006-88295025 None:intergenic 55.0%
TCCAGCAACTCCCTATACCC+AGG + Chr5:88293730-88293749 None:intergenic 55.0%
TCCCTGTCCCTATCCCTTTC+AGG + Chr5:88294728-88294747 None:intergenic 55.0%
TCCCTTGTAGAGGCTCGATG+TGG + Chr5:88294602-88294621 None:intergenic 55.0%
TCCTGGGTATAGGGAGTTGC+TGG - Chr5:88293726-88293745 MsG0580028900.01.T01:intron 55.0%
TCGTGGAACCATGGATGACG+GGG - Chr5:88290203-88290222 MsG0580028900.01.T01:CDS 55.0%
TGAGAGGGACAGATCCAGGA+GGG - Chr5:88294877-88294896 MsG0580028900.01.T01:intron 55.0%
! AGCAGGTACCGTACGACGAA+TGG + Chr5:88294633-88294652 None:intergenic 55.0%
! AGGCGTTTTACACCGACAGG+TGG + Chr5:88293639-88293658 None:intergenic 55.0%
! CCGTGGGCTGATATCAGATG+TGG - Chr5:88291206-88291225 MsG0580028900.01.T01:intron 55.0%
! GCAGGTACCGTACGACGAAT+GGG + Chr5:88294632-88294651 None:intergenic 55.0%
! GCGTCAGGTTGTGGCAAATC+TGG - Chr5:88294448-88294467 MsG0580028900.01.T01:CDS 55.0%
! GGCGTTTTACACCGACAGGT+GGG + Chr5:88293638-88293657 None:intergenic 55.0%
!! CCGTGATTTGCTCCTTGGAC+AGG - Chr5:88292660-88292679 MsG0580028900.01.T01:intron 55.0%
!! GTGGACTAGAGCGTGAGTCA+TGG + Chr5:88295075-88295094 None:intergenic 55.0%
ACAGGGGAAACCACCCGTCA+CGG - Chr5:88294506-88294525 MsG0580028900.01.T01:CDS 60.0%
AGAGCGTGAGTCATGGCGTG+CGG + Chr5:88295068-88295087 None:intergenic 60.0%
CACCGACAGGTGGGCATTAC+AGG + Chr5:88293629-88293648 None:intergenic 60.0%
CAGGGACAGGGACCGAGAAA+GGG - Chr5:88294760-88294779 MsG0580028900.01.T01:intron 60.0%
CGACAGTTCCCCGTCATCCA+TGG + Chr5:88290214-88290233 None:intergenic 60.0%
CGCCACATCGAGCCTCTACA+AGG - Chr5:88294597-88294616 MsG0580028900.01.T01:five_prime_UTR 60.0%
GGGACAGATCCAGGAGGGAT+AGG - Chr5:88294882-88294901 MsG0580028900.01.T01:intron 60.0%
GTAGTAGGCGCCATCGCAGT+AGG - Chr5:88294993-88295012 MsG0580028900.01.T01:intron 60.0%
! GTCATCAGAACCGTGACGGG+TGG + Chr5:88294519-88294538 None:intergenic 60.0%
!! TGGATGACGGGGAACTGTCG+TGG - Chr5:88290214-88290233 MsG0580028900.01.T01:CDS 60.0%
ACAGGGATCGGGACCGGGAT+AGG - Chr5:88294849-88294868 MsG0580028900.01.T01:intron 65.0%
CAGGGATCGGGACCGGGATA+GGG - Chr5:88294850-88294869 MsG0580028900.01.T01:intron 65.0%
CCAGGGACAGGGACCGAGAA+AGG - Chr5:88294759-88294778 MsG0580028900.01.T01:intron 65.0%
CCTTTCTCGGTCCCTGTCCC+TGG + Chr5:88294762-88294781 None:intergenic 65.0%
CTCTCGGTCCCTATCCCTCC+TGG + Chr5:88294894-88294913 None:intergenic 65.0%
GGCGCCATCGCAGTAGGAGT+CGG - Chr5:88294999-88295018 MsG0580028900.01.T01:intron 65.0%
! CATGGCGTGCGGTGCCAACT+TGG + Chr5:88295057-88295076 None:intergenic 65.0%
ACAGGGAGCGGTCACGCTCC+AGG - Chr5:88294741-88294760 MsG0580028900.01.T01:intron 70.0%
AGCGGTCACGCTCCAGGGAC+AGG - Chr5:88294747-88294766 MsG0580028900.01.T01:intron 70.0%
CAGGGAGCGGTCACGCTCCA+GGG - Chr5:88294742-88294761 MsG0580028900.01.T01:intron 70.0%
GCGGTCACGCTCCAGGGACA+GGG - Chr5:88294748-88294767 MsG0580028900.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 88288858 88295816 88288858 ID=MsG0580028900.01;Name=MsG0580028900.01
Chr5 mRNA 88288858 88295816 88288858 ID=MsG0580028900.01.T01;Parent=MsG0580028900.01;Name=MsG0580028900.01.T01;_AED=0.49;_eAED=0.49;_QI=277|1|1|1|0.75|0.6|5|552|412
Chr5 exon 88288858 88290270 88288858 ID=MsG0580028900.01.T01:exon:25812;Parent=MsG0580028900.01.T01
Chr5 exon 88291993 88292064 88291993 ID=MsG0580028900.01.T01:exon:25811;Parent=MsG0580028900.01.T01
Chr5 exon 88292900 88292980 88292900 ID=MsG0580028900.01.T01:exon:25810;Parent=MsG0580028900.01.T01
Chr5 exon 88294335 88294713 88294335 ID=MsG0580028900.01.T01:exon:25809;Parent=MsG0580028900.01.T01
Chr5 exon 88295694 88295816 88295694 ID=MsG0580028900.01.T01:exon:25808;Parent=MsG0580028900.01.T01
Chr5 five_prime_UTR 88295694 88295816 88295694 ID=MsG0580028900.01.T01:five_prime_utr;Parent=MsG0580028900.01.T01
Chr5 five_prime_UTR 88294560 88294713 88294560 ID=MsG0580028900.01.T01:five_prime_utr;Parent=MsG0580028900.01.T01
Chr5 CDS 88294335 88294559 88294335 ID=MsG0580028900.01.T01:cds;Parent=MsG0580028900.01.T01
Chr5 CDS 88292900 88292980 88292900 ID=MsG0580028900.01.T01:cds;Parent=MsG0580028900.01.T01
Chr5 CDS 88291993 88292064 88291993 ID=MsG0580028900.01.T01:cds;Parent=MsG0580028900.01.T01
Chr5 CDS 88289410 88290270 88289410 ID=MsG0580028900.01.T01:cds;Parent=MsG0580028900.01.T01
Chr5 three_prime_UTR 88288858 88289409 88288858 ID=MsG0580028900.01.T01:three_prime_utr;Parent=MsG0580028900.01.T01
Gene Sequence

>MsG0580028900.01.T01

ATGAATATTCTGTCATCTGATTACTTCAAAGAGCTTTATCGATTAAAAACATACCATGAAGTTATTGATGAGAATACAATCAAGTTGATCGTGGAACCATGGATGACGGGGAACTGTCGTGGTCCTTCACTGCTTTCTGTCTTCTTTACAAGTTTTCACCATGAAGCTCACTGTCAAGCAGATGCATGGGCTACTGAAACCCCTGATTCTCCTTACATAAGAGCGGTTGGATTTCTCTATCTGAGATATTATGCTGATCCAAAGACTCTGTGGAGCTGGTTTGAGCCATATGCAAAGGATGATGAGGAATTTTCTCCTGGATCTAATGGACGGATGACTACGATGGGTGTATATATCCGTGATTTGCTCCTTGGACAGTACTACTTCGACACACTTTTTCCTCGCATCCCAGTTCCTGTAATGCGTCAGGTTGTGGCAAATCTGGAAAAGTTGAAACTCCCTACTACACATTGTGGTACGACAGGGGAAACCACCCGTCACGGTTCTGATGACACTGCCCGTAGACCACCTTCTGTGAAAGCTGCCCTTTCAGTCTCTTTTGGTCAGCGTGCGCCACATCGAGCCTCTACAAGGGATTCTTCACCCATTCGTCGTACGGTACCTGCTCCTCATGAAAAAAATGGCACTGATGACATAAGAAGATCTCCCAGCAATCATCGCAGTCAGAGCCGTGAATATCCTGAAAGGGATAGGGACAGGGAGCGGTCACGCTCCAGGGACAGGGACCGAGAAAGGGATAGGGAACGTGATAGGGACAGATATTATGACCGAGATAGGAACAAGGACCGAGATGCTGAAAGATACAGGGATCGGGACCGGGATAGGGACTATGAGAGGGACAGATCCAGGAGGGATAGGGACCGAGAGAGAAGTTATGATTATGATAGGAGGTCTAAGTACGCAGAGAGAGAAAGTAGCCGGGATTATGACAACAGCATTGGCAATGGTAGTAGGCGCCATCGCAGTAGGAGTCGGAGTAGAAGTAGGAGCAGGAGCCGAAGTCAGAGCCAAGTTGGCACCGCACGCCATGACTCACGCTCTAGTCCACAGAGAGATGGAAGTAAGAAGACTTCTGCATCAAGTAATCTAGCTAAACTTAAAGATTTGTACGGTGATTTAGGTGAAAGCAAAGGAGATGCCAACATGGAAAGAATTCCTAGAAGGGATAATAGTGGTGAAGAGGTTATTAGACTTGGTGGCTCTTCTTGGAAGTACTGA

Protein sequence

>MsG0580028900.01.T01

MNILSSDYFKELYRLKTYHEVIDENTIKLIVEPWMTGNCRGPSLLSVFFTSFHHEAHCQADAWATETPDSPYIRAVGFLYLRYYADPKTLWSWFEPYAKDDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRQVVANLEKLKLPTTHCGTTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTVPAPHEKNGTDDIRRSPSNHRSQSREYPERDRDRERSRSRDRDRERDRERDRDRYYDRDRNKDRDAERYRDRDRDRDYERDRSRRDRDRERSYDYDRRSKYAERESSRDYDNSIGNGSRRHRSRSRSRSRSRSRSQSQVGTARHDSRSSPQRDGSKKTSASSNLAKLKDLYGDLGESKGDANMERIPRRDNSGEEVIRLGGSSWKY*