AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025097.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025097.01.T01 MTR_5g022050 91.954 435 25 4 11 441 1 429 0.0 763
MsG0580025097.01.T01 MTR_5g022050 91.129 372 23 4 1 368 1 366 0.0 636
MsG0580025097.01.T01 MTR_5g023090 74.783 460 69 8 11 430 1 453 0.0 628
MsG0580025097.01.T01 MTR_2g048680 46.703 182 96 1 247 427 123 304 7.22e-53 179
MsG0580025097.01.T01 MTR_2g048680 48.466 163 84 0 265 427 62 224 1.83e-50 171
MsG0580025097.01.T01 MTR_5g043640 33.088 136 91 0 272 407 91 226 1.62e-16 79.3
MsG0580025097.01.T01 MTR_5g043640 32.353 136 89 1 275 407 58 193 2.59e-15 75.9
MsG0580025097.01.T01 MTR_5g026800 32.117 137 92 1 275 410 15 151 1.18e-14 74.3
MsG0580025097.01.T01 MTR_4g092760 29.825 171 112 3 247 416 40 203 1.06e-12 70.5
MsG0580025097.01.T01 MTR_5g077770 36.364 154 92 2 274 427 591 738 4.59e-12 68.6
MsG0580025097.01.T01 MTR_7g020860 38.095 84 52 0 336 419 739 822 1.03e-11 67.4
MsG0580025097.01.T01 MTR_6g027840 28.649 185 130 2 256 439 195 378 1.17e-11 67.0
MsG0580025097.01.T01 MTR_4g113530 33.088 136 88 2 275 409 555 688 1.18e-11 67.4
MsG0580025097.01.T01 MTR_7g115280 27.632 152 108 2 263 414 114 263 5.78e-11 64.7
MsG0580025097.01.T01 MTR_3g491870 33.000 100 65 1 313 410 244 343 8.15e-11 63.5
MsG0580025097.01.T01 MTR_3g014090 27.011 174 113 4 254 413 485 658 8.57e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025097.01.T01 AT5G66055 52.482 423 187 6 23 435 7 425 1.09e-148 430
MsG0580025097.01.T01 AT5G66055 49.300 357 168 5 23 370 7 359 7.44e-112 333
MsG0580025097.01.T01 AT5G40160 48.352 182 93 1 247 427 127 308 9.08e-54 182
MsG0580025097.01.T01 AT5G40160 48.077 156 80 1 247 401 127 282 1.13e-44 157
MsG0580025097.01.T01 AT4G27780 40.506 79 47 0 332 410 261 339 8.87e-13 69.7
MsG0580025097.01.T01 AT2G25600 32.857 140 92 1 275 414 581 718 1.07e-12 70.9
MsG0580025097.01.T01 AT2G03430 30.435 138 96 0 270 407 82 219 3.62e-12 66.6
MsG0580025097.01.T01 AT4G19150 26.708 161 113 2 275 434 20 176 4.07e-12 66.2
MsG0580025097.01.T01 AT2G14255 31.333 150 100 2 263 409 83 232 7.91e-12 67.8
MsG0580025097.01.T01 AT5G53470 36.709 79 50 0 332 410 246 324 1.28e-11 66.2
MsG0580025097.01.T01 AT5G13300 33.663 101 65 1 326 426 718 816 2.65e-11 66.2

Find 90 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTATTTGTAGGATAAA+TGG 0.153410 5:+13808595 MsG0580025097.01.T01:intron
TTCTTCTTTGAAATTGAAAT+TGG 0.200442 5:-13806712 None:intergenic
AATCCTAGATGGGCTGTTTA+TGG 0.219355 5:+13807039 MsG0580025097.01.T01:CDS
CAGTTGAAGCCTTTGGTTCT+TGG 0.229120 5:+13806943 MsG0580025097.01.T01:CDS
AGAATCTTGTTCCTGATAAA+TGG 0.230329 5:+13806758 MsG0580025097.01.T01:CDS
TGAACTTCTTTCCATTTATC+AGG 0.246691 5:-13806769 None:intergenic
GCTCTTTACAAAGCGGTAAT+TGG 0.259504 5:+13808806 MsG0580025097.01.T01:CDS
GTTGATTCCTTCGAGGGATA+TGG 0.264643 5:+13806879 MsG0580025097.01.T01:CDS
TTTGAAATTGAAATTGGTTT+TGG 0.269853 5:-13806706 None:intergenic
GTGAAGCTTCTGCTGATTAA+AGG 0.274738 5:+13809619 MsG0580025097.01.T01:CDS
GGCTTATAAAGAAGCTAAAT+TGG 0.277637 5:+13806918 MsG0580025097.01.T01:CDS
AATATGGAAACTTTAGCTTT+AGG 0.286592 5:+13811010 MsG0580025097.01.T01:three_prime_UTR
TATGGATTTGAATGAGTATA+AGG 0.293852 5:+13806897 MsG0580025097.01.T01:CDS
GTCTGTCGGGAGCGTCTATA+AGG 0.356780 5:-13810885 None:intergenic
GACTCTGCTGCTATGAAAAC+TGG 0.356814 5:+13807108 MsG0580025097.01.T01:CDS
GCAAGCAGCTCTTCAGAATA+TGG 0.356818 5:+13810994 MsG0580025097.01.T01:three_prime_UTR
ATTGGCTCAGTTGAAGCCTT+TGG 0.368198 5:+13806936 MsG0580025097.01.T01:CDS
TGATGTTGATATTAATGTTA+TGG 0.368619 5:+13808680 MsG0580025097.01.T01:CDS
CAATGTGGATATAAATCTTC+AGG 0.373575 5:+13809449 MsG0580025097.01.T01:CDS
AAGAAGAGTGTGTGGGGTTG+TGG 0.374765 5:-13806463 None:intergenic
TCTCAAGAGACTGTTGGTTA+TGG 0.380991 5:-13808840 None:intergenic
TGATATTAATGTTATGGATA+AGG 0.387981 5:+13808686 MsG0580025097.01.T01:CDS
ATCCTAGATGGGCTGTTTAT+GGG 0.393025 5:+13807040 MsG0580025097.01.T01:CDS
TAGTGCCTAGGAATCCTAGA+TGG 0.397952 5:+13807028 MsG0580025097.01.T01:CDS
ACAAGAGTACTTTAATTGTT+CGG 0.397986 5:-13809422 None:intergenic
TTCAATCCATAACTAGTTGC+GGG 0.402389 5:-13806381 None:intergenic
CTCACATTATCTTGCACAAA+CGG 0.408366 5:-13808875 None:intergenic
TCAAAACCCGCAACTAGTTA+TGG 0.408808 5:+13806375 MsG0580025097.01.T01:five_prime_UTR
AAATGTATTCAAAATATGAT+AGG 0.418620 5:+13811057 MsG0580025097.01.T01:three_prime_UTR
GAAGCCTTTGGTTCTTGGTA+AGG 0.419470 5:+13806948 MsG0580025097.01.T01:CDS
AGATGGGCTGTTTATGGGAG+AGG 0.423749 5:+13807045 MsG0580025097.01.T01:CDS
TTCTTCTTATCCCCGTCTGT+CGG 0.435105 5:-13810899 None:intergenic
TTGCTGTGTCTTAGGATGGC+TGG 0.440960 5:+13809554 MsG0580025097.01.T01:intron
CGGAGACTGTCTTGTCTTCG+AGG 0.443191 5:+13806621 MsG0580025097.01.T01:CDS
TCTTCTTATCCCCGTCTGTC+GGG 0.451834 5:-13810898 None:intergenic
GTCGTCCTAGGTTGTTTACC+AGG 0.463875 5:+13808242 MsG0580025097.01.T01:CDS
ACGAGGTTGTTGTCGGAAGT+TGG 0.464298 5:-13806670 None:intergenic
AAAGTTATGAAGAAGAAAAG+AGG 0.482187 5:+13806856 MsG0580025097.01.T01:CDS
ACAGCCCATCTAGGATTCCT+AGG 0.499470 5:-13807033 None:intergenic
TTTATCAGGAACAAGATTCT+CGG 0.500203 5:-13806755 None:intergenic
GTTGTTTACGAGGTTGTTGT+CGG 0.500244 5:-13806677 None:intergenic
CTCGACCTTTGCCTTTACTC+TGG 0.500612 5:+13810819 MsG0580025097.01.T01:CDS
CTCCCATAAACAGCCCATCT+AGG 0.507590 5:-13807042 None:intergenic
GAAGATGATGAAGAAGAAGA+AGG 0.510543 5:+13806985 MsG0580025097.01.T01:CDS
GTTGTTTACCAGGGAGGAGA+GGG 0.513400 5:+13808252 MsG0580025097.01.T01:CDS
CTTCGTAGTTGTTGTCATGT+TGG 0.515970 5:-13806588 None:intergenic
AAGTTATGAAGAAGAAAAGA+GGG 0.517219 5:+13806857 MsG0580025097.01.T01:CDS
AGGTGGGTTGAGTGATGAGA+GGG 0.518172 5:+13807005 MsG0580025097.01.T01:CDS
GAAGTAGCAACTGACAAGTC+TGG 0.525281 5:-13808295 None:intergenic
GATGATGAAGAAGAAGAAGG+TGG 0.525802 5:+13806988 MsG0580025097.01.T01:CDS
CGAGTTTCTCAAGAGACTGT+TGG 0.526379 5:-13808846 None:intergenic
ATGGAGAGAAGAAGAGTGTG+TGG 0.526930 5:-13806471 None:intergenic
TGGAGAGAAGAAGAGTGTGT+GGG 0.527588 5:-13806470 None:intergenic
GACTGTCTTGTCTTCGAGGA+AGG 0.528284 5:+13806625 MsG0580025097.01.T01:CDS
TGTTTATGGGAGAGGTTTCG+AGG 0.529560 5:+13807053 MsG0580025097.01.T01:CDS
ATTCAATCCATAACTAGTTG+CGG 0.541413 5:-13806382 None:intergenic
TATAGACGCTCCCGACAGAC+GGG 0.545707 5:+13810888 MsG0580025097.01.T01:CDS
AAAGAGGGTTGATTCCTTCG+AGG 0.548485 5:+13806872 MsG0580025097.01.T01:CDS
CAACAAATCCCTCTCCTCCC+TGG 0.550164 5:-13808260 None:intergenic
GTCTGAACAGCAAGATGTAA+TGG 0.552014 5:-13809580 None:intergenic
AAGAGGGTTGATTCCTTCGA+GGG 0.552504 5:+13806873 MsG0580025097.01.T01:CDS
ATGATGAAGAAGAAGAAGGT+GGG 0.553208 5:+13806989 MsG0580025097.01.T01:CDS
AAGGTGGGTTGAGTGATGAG+AGG 0.562680 5:+13807004 MsG0580025097.01.T01:CDS
GAGTAAAGGCAAAGGTCGAG+TGG 0.584489 5:-13810816 None:intergenic
TTGTACAGCATAGTGAATCA+AGG 0.589301 5:-13809388 None:intergenic
AGTGCCTAGGAATCCTAGAT+GGG 0.592539 5:+13807029 MsG0580025097.01.T01:CDS
AGATTGAAACTTGCGAGGTG+TGG 0.593440 5:-13806515 None:intergenic
CAACAGTCTCTTGAGAAACT+CGG 0.594452 5:+13808847 MsG0580025097.01.T01:CDS
TTATAGACGCTCCCGACAGA+CGG 0.598131 5:+13810887 MsG0580025097.01.T01:CDS
GGTTGTTTACCAGGGAGGAG+AGG 0.600499 5:+13808251 MsG0580025097.01.T01:CDS
TCGTCCTAGGTTGTTTACCA+GGG 0.600545 5:+13808243 MsG0580025097.01.T01:CDS
AGTACTCTTGTTGTACAATG+TGG 0.602365 5:+13809434 MsG0580025097.01.T01:CDS
GAAACTTTAGCTTTAGGACA+AGG 0.609493 5:+13811016 MsG0580025097.01.T01:three_prime_UTR
TTCAAATCCATATCCCTCGA+AGG 0.611215 5:-13806886 None:intergenic
AATTACCGCTTTGTAAAGAG+CGG 0.611856 5:-13808804 None:intergenic
TAAACATAACGAAGAAAGAA+CGG 0.615305 5:+13806800 MsG0580025097.01.T01:CDS
GTGATGAGAGGGTAGTGCCT+AGG 0.618143 5:+13807016 MsG0580025097.01.T01:CDS
TGAAAAGATTGAAACTTGCG+AGG 0.619228 5:-13806520 None:intergenic
CTTGCAGCAAAAGTGTGCAA+AGG 0.619949 5:-13808621 None:intergenic
TTGTGGATTACGAACAAGTG+TGG 0.636734 5:-13806446 None:intergenic
TCCTAGGTTGTTTACCAGGG+AGG 0.641807 5:+13808246 MsG0580025097.01.T01:CDS
GGAGAGAAGAAGAGTGTGTG+GGG 0.642297 5:-13806469 None:intergenic
AACTACGAAGAACACATCAT+CGG 0.651971 5:+13806601 MsG0580025097.01.T01:CDS
TCCTCCCTGGTAAACAACCT+AGG 0.653160 5:-13808247 None:intergenic
AAAACCTTACCAAGAACCAA+AGG 0.660134 5:-13806952 None:intergenic
TTTGACCAGAGTAAAGGCAA+AGG 0.667685 5:-13810824 None:intergenic
ATAGACGCTCCCGACAGACG+GGG 0.691778 5:+13810889 MsG0580025097.01.T01:CDS
TTTGACCGCTCTTTACAAAG+CGG 0.710243 5:+13808799 MsG0580025097.01.T01:CDS
TCTGCTGCTATGAAAACTGG+AGG 0.737144 5:+13807111 MsG0580025097.01.T01:CDS
TACAGCATAGTGAATCAAGG+TGG 0.739803 5:-13809385 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTTATAAAATAGAAG+CGG + Chr5:13809986-13810005 MsG0580025097.01.T01:intron 10.0%
!!! AAAATTCTACTTTTTTTTTT+TGG - Chr5:13811107-13811126 None:intergenic 10.0%
!! AAATGTATTCAAAATATGAT+AGG + Chr5:13811057-13811076 MsG0580025097.01.T01:three_prime_UTR 15.0%
!! AACTATATGTTAATAGATTA+AGG - Chr5:13809285-13809304 None:intergenic 15.0%
!! ACTATATGTTAATAGATTAA+GGG - Chr5:13809284-13809303 None:intergenic 15.0%
!! ATAATTTATAAAATAGAAGC+GGG + Chr5:13809987-13810006 MsG0580025097.01.T01:intron 15.0%
!! TTACATTGATAGATTAATAT+AGG - Chr5:13809688-13809707 None:intergenic 15.0%
!!! AAATAAAACTTTTGATGATT+TGG + Chr5:13810921-13810940 MsG0580025097.01.T01:exon 15.0%
!!! AATTTTTTCATAAGAAAAGA+AGG + Chr5:13811121-13811140 MsG0580025097.01.T01:intron 15.0%
!! AAAAAAGGGAAAAAATACAA+TGG - Chr5:13809811-13809830 None:intergenic 20.0%
!! AAAAAGGGAAAAAATACAAT+GGG - Chr5:13809810-13809829 None:intergenic 20.0%
!! AAAACTAAAAGTTGTTACAT+AGG - Chr5:13807199-13807218 None:intergenic 20.0%
!! AAACACAATAGTTTAAATAG+AGG - Chr5:13808757-13808776 None:intergenic 20.0%
!! AAATATCACTGTAAAAGAAA+TGG - Chr5:13810755-13810774 None:intergenic 20.0%
!! AACTAAATATTCATCAATCA+CGG - Chr5:13810567-13810586 None:intergenic 20.0%
!! ATGAAAAAGTTGAGATATAA+AGG + Chr5:13807824-13807843 MsG0580025097.01.T01:intron 20.0%
!! CATGAATACTAATTTATACA+CGG + Chr5:13808711-13808730 MsG0580025097.01.T01:intron 20.0%
!! TAACAGTACAAAATATAATG+AGG - Chr5:13808372-13808391 None:intergenic 20.0%
!! TGATATTAATGTTATGGATA+AGG + Chr5:13808686-13808705 MsG0580025097.01.T01:CDS 20.0%
!! TGATCAGAAATTAAAAAACA+AGG + Chr5:13809645-13809664 MsG0580025097.01.T01:CDS 20.0%
!! TGATGTTGATATTAATGTTA+TGG + Chr5:13808680-13808699 MsG0580025097.01.T01:CDS 20.0%
!!! AAAACTTTCAACTGTTATTT+AGG + Chr5:13810348-13810367 MsG0580025097.01.T01:intron 20.0%
!!! AATTCTTTAGAAAATAGAAG+TGG + Chr5:13810119-13810138 MsG0580025097.01.T01:intron 20.0%
!!! ATATCATAATATTTTGTCTG+TGG + Chr5:13810650-13810669 MsG0580025097.01.T01:intron 20.0%
!!! ATGGACATTTTGAAAAATAA+GGG + Chr5:13807691-13807710 MsG0580025097.01.T01:intron 20.0%
!!! ATTATATTTTGTACTGTTAC+CGG + Chr5:13808373-13808392 MsG0580025097.01.T01:intron 20.0%
!!! CTCTATATTTATGTTTTCAA+TGG + Chr5:13808566-13808585 MsG0580025097.01.T01:intron 20.0%
!!! TATGGACATTTTGAAAAATA+AGG + Chr5:13807690-13807709 MsG0580025097.01.T01:intron 20.0%
!!! TGTTGGTTAAAACAAATTTA+TGG + Chr5:13807746-13807765 MsG0580025097.01.T01:intron 20.0%
!!! TGTTTTGTTTTACTTTTTCA+AGG + Chr5:13808772-13808791 MsG0580025097.01.T01:intron 20.0%
!!! TTATATCTCAACTTTTTCAT+AGG - Chr5:13807824-13807843 None:intergenic 20.0%
!!! TTCTTCTTTGAAATTGAAAT+TGG - Chr5:13806715-13806734 None:intergenic 20.0%
!!! TTTGAAATTGAAATTGGTTT+TGG - Chr5:13806709-13806728 None:intergenic 20.0%
!!! TTTGTATTTACAATCTGTTT+TGG + Chr5:13807137-13807156 MsG0580025097.01.T01:intron 20.0%
!!! TTTTTTTTTTATCCAAGCAT+GGG - Chr5:13810429-13810448 None:intergenic 20.0%
!!! TTTTTTTTTTTATCCAAGCA+TGG - Chr5:13810430-13810449 None:intergenic 20.0%
! AAAGTTATGAAGAAGAAAAG+AGG + Chr5:13806856-13806875 MsG0580025097.01.T01:CDS 25.0%
! AAGTTATGAAGAAGAAAAGA+GGG + Chr5:13806857-13806876 MsG0580025097.01.T01:CDS 25.0%
! AATATGCTGAAAACAACTTA+TGG + Chr5:13809166-13809185 MsG0580025097.01.T01:intron 25.0%
! CAGCCTTTCAAAAAAAAAAA+GGG + Chr5:13809879-13809898 MsG0580025097.01.T01:intron 25.0%
! CTCATTATTTGTAGGATAAA+TGG + Chr5:13808595-13808614 MsG0580025097.01.T01:intron 25.0%
! GAAATTTGATTGTGATGAAA+TGG + Chr5:13808089-13808108 MsG0580025097.01.T01:intron 25.0%
! GTAAGAAAATCAACAGATAA+AGG - Chr5:13808946-13808965 None:intergenic 25.0%
! TAAACATAACGAAGAAAGAA+CGG + Chr5:13806800-13806819 MsG0580025097.01.T01:CDS 25.0%
! TATGGATTTGAATGAGTATA+AGG + Chr5:13806897-13806916 MsG0580025097.01.T01:CDS 25.0%
! TCAAAAAAAAAAAGGGTCAT+TGG + Chr5:13809886-13809905 MsG0580025097.01.T01:intron 25.0%
! TCAGCCTTTCAAAAAAAAAA+AGG + Chr5:13809878-13809897 MsG0580025097.01.T01:intron 25.0%
! TGTATTGCTCTTATTGTTTA+GGG + Chr5:13807469-13807488 MsG0580025097.01.T01:intron 25.0%
! TTACTTCAACATCAAAACAA+AGG - Chr5:13808421-13808440 None:intergenic 25.0%
! TTCTCATTGTTTGCAATATA+TGG + Chr5:13808169-13808188 MsG0580025097.01.T01:intron 25.0%
! TTGTATTGCTCTTATTGTTT+AGG + Chr5:13807468-13807487 MsG0580025097.01.T01:intron 25.0%
!! ACATGTATTCTTTAGAAAAC+AGG + Chr5:13810183-13810202 MsG0580025097.01.T01:intron 25.0%
!! TATTCATTGATGGTTAAATC+CGG + Chr5:13808119-13808138 MsG0580025097.01.T01:intron 25.0%
!! TGAATATAGATGCTTTTAAC+TGG + Chr5:13809737-13809756 MsG0580025097.01.T01:intron 25.0%
!! TGAATATAGGTGCTTTTAAT+GGG + Chr5:13810011-13810030 MsG0580025097.01.T01:intron 25.0%
!! TGGATCATTTTATTCATTGA+TGG + Chr5:13808109-13808128 MsG0580025097.01.T01:intron 25.0%
!!! AATATGGAAACTTTAGCTTT+AGG + Chr5:13811010-13811029 MsG0580025097.01.T01:three_prime_UTR 25.0%
!!! ACAAGAGTACTTTAATTGTT+CGG - Chr5:13809425-13809444 None:intergenic 25.0%
!!! TACTTTTAGAATCTTTGTTG+CGG + Chr5:13808655-13808674 MsG0580025097.01.T01:CDS 25.0%
!!! TATGCTTGTTAGATAACTTT+TGG + Chr5:13807615-13807634 MsG0580025097.01.T01:intron 25.0%
!!! TATTTTTGTTAATGCTGTTG+AGG + Chr5:13807163-13807182 MsG0580025097.01.T01:intron 25.0%
!!! TGACCCTTTTTTTTTTTGAA+AGG - Chr5:13809885-13809904 None:intergenic 25.0%
!!! TGGATTTGCTTTTGATTTAT+GGG + Chr5:13807719-13807738 MsG0580025097.01.T01:intron 25.0%
!!! TGTTGCATTTTTTTCAATGT+TGG + Chr5:13808483-13808502 MsG0580025097.01.T01:intron 25.0%
!!! TTGGATTTGCTTTTGATTTA+TGG + Chr5:13807718-13807737 MsG0580025097.01.T01:intron 25.0%
!!! TTGTTTTACTTTTTCAAGGA+TGG + Chr5:13808776-13808795 MsG0580025097.01.T01:intron 25.0%
AAAAAACTCGCGGATAAAAA+AGG - Chr5:13809826-13809845 None:intergenic 30.0%
AAAAACTCGCGGATAAAAAA+GGG - Chr5:13809825-13809844 None:intergenic 30.0%
AAAGAAGAAAAAGAAGACAG+TGG + Chr5:13806726-13806745 MsG0580025097.01.T01:CDS 30.0%
AAGCAAATGCATAGAATATC+AGG - Chr5:13809335-13809354 None:intergenic 30.0%
AGAATCTTGTTCCTGATAAA+TGG + Chr5:13806758-13806777 MsG0580025097.01.T01:CDS 30.0%
AGTTAGGTGATTTAGATGAA+AGG + Chr5:13810238-13810257 MsG0580025097.01.T01:intron 30.0%
ATATAGAGATTACTTACCGA+AGG - Chr5:13808554-13808573 None:intergenic 30.0%
ATCCAAAATGGCTCTTAAAT+TGG + Chr5:13807949-13807968 MsG0580025097.01.T01:intron 30.0%
ATTCAATCCATAACTAGTTG+CGG - Chr5:13806385-13806404 None:intergenic 30.0%
CAAACACATGTATTTACGTT+TGG + Chr5:13807264-13807283 MsG0580025097.01.T01:intron 30.0%
CAATGTGGATATAAATCTTC+AGG + Chr5:13809449-13809468 MsG0580025097.01.T01:CDS 30.0%
GAGGTAGAAAAGCTAATTAT+TGG - Chr5:13809495-13809514 None:intergenic 30.0%
GCATAAAATGAATATCTTCC+CGG - Chr5:13808141-13808160 None:intergenic 30.0%
GGCTAATACTCATTATTTGT+AGG + Chr5:13808587-13808606 MsG0580025097.01.T01:intron 30.0%
GGCTTATAAAGAAGCTAAAT+TGG + Chr5:13806918-13806937 MsG0580025097.01.T01:CDS 30.0%
TGAACTTCTTTCCATTTATC+AGG - Chr5:13806772-13806791 None:intergenic 30.0%
TGACACAATAATCTATGAAG+CGG - Chr5:13807339-13807358 None:intergenic 30.0%
TGATAACAATGATGAATTCC+CGG - Chr5:13809002-13809021 None:intergenic 30.0%
TTATATCCTTAGTTACCTGT+TGG + Chr5:13809306-13809325 MsG0580025097.01.T01:intron 30.0%
TTGGAGAAGTTTATCCAAAA+TGG + Chr5:13807937-13807956 MsG0580025097.01.T01:intron 30.0%
TTTATCAGGAACAAGATTCT+CGG - Chr5:13806758-13806777 None:intergenic 30.0%
TTTCATCTAAATCACCTAAC+TGG - Chr5:13810239-13810258 None:intergenic 30.0%
TTTGAAAAATAAGGGTGGTT+TGG + Chr5:13807699-13807718 MsG0580025097.01.T01:intron 30.0%
TTTGTTTATATTGCCATCCT+AGG - Chr5:13808069-13808088 None:intergenic 30.0%
! ATTCACTTGTTTGTTACCTT+CGG + Chr5:13808535-13808554 MsG0580025097.01.T01:intron 30.0%
! ATTCATTGATGGTTAAATCC+GGG + Chr5:13808120-13808139 MsG0580025097.01.T01:intron 30.0%
! CTGAATATAGGTGCTTTTAA+TGG + Chr5:13810010-13810029 MsG0580025097.01.T01:intron 30.0%
! GAATCATAATAGAAGTGTAG+GGG + Chr5:13808505-13808524 MsG0580025097.01.T01:intron 30.0%
! GGAATCATAATAGAAGTGTA+GGG + Chr5:13808504-13808523 MsG0580025097.01.T01:intron 30.0%
! TAATAGATTAAGGGCATGTT+TGG - Chr5:13809275-13809294 None:intergenic 30.0%
! TCTCTTCAGATAAGTGTTTT+TGG + Chr5:13807918-13807937 MsG0580025097.01.T01:intron 30.0%
! TCTTTCATGCTTTTGTGTAT+AGG + Chr5:13808220-13808239 MsG0580025097.01.T01:intron 30.0%
! TGAATTTTGTTCTCAAACAG+TGG - Chr5:13809533-13809552 None:intergenic 30.0%
! TGGAATCATAATAGAAGTGT+AGG + Chr5:13808503-13808522 MsG0580025097.01.T01:intron 30.0%
!! AAATTCATTTGCTGTGTCTT+AGG + Chr5:13809546-13809565 MsG0580025097.01.T01:intron 30.0%
!! AGGCTTGATTGAATTTGTTT+TGG + Chr5:13810539-13810558 MsG0580025097.01.T01:intron 30.0%
!! ATTTGTCTTTTGTTTGTCTC+AGG + Chr5:13810782-13810801 MsG0580025097.01.T01:intron 30.0%
!! GACATTTTGAAAAATAAGGG+TGG + Chr5:13807694-13807713 MsG0580025097.01.T01:intron 30.0%
!! TATGAAATGTATTGGTGTCA+GGG + Chr5:13807363-13807382 MsG0580025097.01.T01:intron 30.0%
!!! ACTAGAGAGTTCTTATTTTC+CGG - Chr5:13808395-13808414 None:intergenic 30.0%
!!! TTGGTTTTTTGTTGTTTACG+AGG - Chr5:13806690-13806709 None:intergenic 30.0%
AAAACCTTACCAAGAACCAA+AGG - Chr5:13806955-13806974 None:intergenic 35.0%
AACTACGAAGAACACATCAT+CGG + Chr5:13806601-13806620 MsG0580025097.01.T01:CDS 35.0%
AATTACCGCTTTGTAAAGAG+CGG - Chr5:13808807-13808826 None:intergenic 35.0%
ACAAACATTCATCATGACAC+TGG + Chr5:13809948-13809967 MsG0580025097.01.T01:intron 35.0%
ACACGGAAGATTATAATGTG+TGG + Chr5:13808728-13808747 MsG0580025097.01.T01:intron 35.0%
ACCTTGTGTGTTAGATAATG+TGG + Chr5:13809712-13809731 MsG0580025097.01.T01:intron 35.0%
AGCAGTAAGCAGATTAATAC+TGG + Chr5:13810729-13810748 MsG0580025097.01.T01:intron 35.0%
ATGATGAAGAAGAAGAAGGT+GGG + Chr5:13806989-13807008 MsG0580025097.01.T01:CDS 35.0%
ATTGACTAATCAACGTGTCA+CGG - Chr5:13810489-13810508 None:intergenic 35.0%
CAAGCACATGTAGTTATGTT+TGG + Chr5:13807529-13807548 MsG0580025097.01.T01:intron 35.0%
CACATACATGTAGTTACCTT+TGG + Chr5:13807410-13807429 MsG0580025097.01.T01:intron 35.0%
CCTTGTGTGTTAGATAATGT+GGG + Chr5:13809713-13809732 MsG0580025097.01.T01:intron 35.0%
CTCACATTATCTTGCACAAA+CGG - Chr5:13808878-13808897 None:intergenic 35.0%
GAAGATGATGAAGAAGAAGA+AGG + Chr5:13806985-13807004 MsG0580025097.01.T01:CDS 35.0%
GCTTCATAGATTATTGTGTC+AGG + Chr5:13807338-13807357 MsG0580025097.01.T01:intron 35.0%
GGTAAATTATCAGTTGTCAC+TGG + Chr5:13810039-13810058 MsG0580025097.01.T01:intron 35.0%
GTAGTGAAAATCAACTTCCT+TGG + Chr5:13807659-13807678 MsG0580025097.01.T01:intron 35.0%
GTCAGGTGTATGAAATGTAT+TGG + Chr5:13807355-13807374 MsG0580025097.01.T01:intron 35.0%
GTTGTATATTGCCATCCATT+AGG - Chr5:13807997-13808016 None:intergenic 35.0%
TAGAATATCAGGATACCAAC+AGG - Chr5:13809324-13809343 None:intergenic 35.0%
TCAGGGTGTATGAAATGTAT+TGG + Chr5:13807380-13807399 MsG0580025097.01.T01:intron 35.0%
TGAAAAGATTGAAACTTGCG+AGG - Chr5:13806523-13806542 None:intergenic 35.0%
TGGAAGAAGAAGAAGAAGAA+GGG - Chr5:13806498-13806517 None:intergenic 35.0%
TTAAATGTAACCTCGTGTGT+TGG + Chr5:13810142-13810161 MsG0580025097.01.T01:intron 35.0%
TTCAATCCATAACTAGTTGC+GGG - Chr5:13806384-13806403 None:intergenic 35.0%
TTCAGTAAGTATTCCATGTC+TGG + Chr5:13808315-13808334 MsG0580025097.01.T01:intron 35.0%
TTGTACAGCATAGTGAATCA+AGG - Chr5:13809391-13809410 None:intergenic 35.0%
TTGTCGGAAGTTGGAAAAAT+GGG - Chr5:13806664-13806683 None:intergenic 35.0%
! AATCACCTAACTGGTTCTTA+AGG - Chr5:13810230-13810249 None:intergenic 35.0%
! AGAGAATTTTGTGGAAGTTG+CGG - Chr5:13806558-13806577 None:intergenic 35.0%
! AGTACTCTTGTTGTACAATG+TGG + Chr5:13809434-13809453 MsG0580025097.01.T01:CDS 35.0%
! CACCAATTTAAGAGCCATTT+TGG - Chr5:13807954-13807973 None:intergenic 35.0%
! CTGTTTTCATAAGCTATCCT+GGG + Chr5:13809133-13809152 MsG0580025097.01.T01:intron 35.0%
! GTATGAAATGTATTGGTGTC+AGG + Chr5:13807362-13807381 MsG0580025097.01.T01:intron 35.0%
! GTGATGAAGAGAGAATTTTG+TGG - Chr5:13806567-13806586 None:intergenic 35.0%
! TAATAGAAGTGTAGGGGAAA+AGG + Chr5:13808511-13808530 MsG0580025097.01.T01:intron 35.0%
! TTCTACCTCTTACTCTTTTG+TGG + Chr5:13809506-13809525 MsG0580025097.01.T01:intron 35.0%
! TTTGATTTATGGGAGCTTGT+TGG + Chr5:13807729-13807748 MsG0580025097.01.T01:intron 35.0%
!! AGATGCTTTTAACTGGTCAT+TGG + Chr5:13809744-13809763 MsG0580025097.01.T01:intron 35.0%
!! GAAACTTTAGCTTTAGGACA+AGG + Chr5:13811016-13811035 MsG0580025097.01.T01:three_prime_UTR 35.0%
!! GATGCTTTTAACTGGTCATT+GGG + Chr5:13809745-13809764 MsG0580025097.01.T01:intron 35.0%
!! TGACATTTTGACCAGAGTAA+AGG - Chr5:13810833-13810852 None:intergenic 35.0%
!! TTGCTTTGTTGTTTATGTGC+TGG + Chr5:13809349-13809368 MsG0580025097.01.T01:intron 35.0%
!!! AGTTTTAGATTGAACGTGTC+AGG + Chr5:13807213-13807232 MsG0580025097.01.T01:intron 35.0%
AACCTTTGGTACCTAATGGA+TGG + Chr5:13807983-13808002 MsG0580025097.01.T01:intron 40.0%
AATGGGATGCCGCAATTATA+CGG - Chr5:13809793-13809812 None:intergenic 40.0%
AGACTGTTCAGAAGAGCTTA+TGG - Chr5:13809211-13809230 None:intergenic 40.0%
AGCAACACAGACACATATAC+CGG - Chr5:13807577-13807596 None:intergenic 40.0%
AGGAATCATTAGACTTTGCC+AGG + Chr5:13810368-13810387 MsG0580025097.01.T01:intron 40.0%
AGGATACCAACAGGTAACTA+AGG - Chr5:13809315-13809334 None:intergenic 40.0%
ATGTCCATACATCATCACCA+AGG - Chr5:13807679-13807698 None:intergenic 40.0%
ATTTACCTACGAAGCAACTC+AGG + Chr5:13810063-13810082 MsG0580025097.01.T01:intron 40.0%
CAACAGTCTCTTGAGAAACT+CGG + Chr5:13808847-13808866 MsG0580025097.01.T01:CDS 40.0%
CAATGACACGTAGATACCAA+AGG - Chr5:13807429-13807448 None:intergenic 40.0%
CCCACATTATCTAACACACA+AGG - Chr5:13809716-13809735 None:intergenic 40.0%
CTATGTGTCAGTGTCATATC+CGG + Chr5:13807555-13807574 MsG0580025097.01.T01:intron 40.0%
CTCTTCCTTAAGAACCAGTT+AGG + Chr5:13810222-13810241 MsG0580025097.01.T01:intron 40.0%
CTTCGTAGTTGTTGTCATGT+TGG - Chr5:13806591-13806610 None:intergenic 40.0%
GAAAGACTTCCCTGGTTAAT+GGG - Chr5:13810295-13810314 None:intergenic 40.0%
GAAGAAGAAGAAGAAGGGAA+TGG - Chr5:13806493-13806512 None:intergenic 40.0%
GATGATGAAGAAGAAGAAGG+TGG + Chr5:13806988-13807007 MsG0580025097.01.T01:CDS 40.0%
GCTACATAAACAACCTAGGA+TGG + Chr5:13808053-13808072 MsG0580025097.01.T01:intron 40.0%
GCTCTTTACAAAGCGGTAAT+TGG + Chr5:13808806-13808825 MsG0580025097.01.T01:CDS 40.0%
GTCTGAACAGCAAGATGTAA+TGG - Chr5:13809583-13809602 None:intergenic 40.0%
GTGGAAGAAGAAGAAGAAGA+AGG - Chr5:13806499-13806518 None:intergenic 40.0%
GTTGTCGGAAGTTGGAAAAA+TGG - Chr5:13806665-13806684 None:intergenic 40.0%
GTTGTTTACGAGGTTGTTGT+CGG - Chr5:13806680-13806699 None:intergenic 40.0%
GTTGTTTATGTGCTGGAAAC+AGG + Chr5:13809356-13809375 MsG0580025097.01.T01:intron 40.0%
TACAGCATAGTGAATCAAGG+TGG - Chr5:13809388-13809407 None:intergenic 40.0%
TACATATCTAGTCCCATGCT+TGG + Chr5:13810414-13810433 MsG0580025097.01.T01:intron 40.0%
TCAAAACCCGCAACTAGTTA+TGG + Chr5:13806375-13806394 MsG0580025097.01.T01:five_prime_UTR 40.0%
TCACAACCTTTGGTACCTAA+TGG + Chr5:13807979-13807998 MsG0580025097.01.T01:intron 40.0%
TGCCATGAAAAACACAGCAA+TGG - Chr5:13810970-13810989 None:intergenic 40.0%
TGTCGGAAGTTGGAAAAATG+GGG - Chr5:13806663-13806682 None:intergenic 40.0%
TGTGGTGTTCCGTATAATTG+CGG + Chr5:13809781-13809800 MsG0580025097.01.T01:intron 40.0%
TTACTACGCAACATCAACGA+TGG - Chr5:13808453-13808472 None:intergenic 40.0%
TTATGTGCTGGAAACAGGAT+GGG + Chr5:13809361-13809380 MsG0580025097.01.T01:intron 40.0%
TTCAAATCCATATCCCTCGA+AGG - Chr5:13806889-13806908 None:intergenic 40.0%
TTGCAAACAATGAGAAGCAG+CGG - Chr5:13808165-13808184 None:intergenic 40.0%
TTTATGTGCTGGAAACAGGA+TGG + Chr5:13809360-13809379 MsG0580025097.01.T01:intron 40.0%
TTTGACCAGAGTAAAGGCAA+AGG - Chr5:13810827-13810846 None:intergenic 40.0%
TTTGACCGCTCTTTACAAAG+CGG + Chr5:13808799-13808818 MsG0580025097.01.T01:CDS 40.0%
! AGCCATTGCTGTGTTTTTCA+TGG + Chr5:13810965-13810984 MsG0580025097.01.T01:three_prime_UTR 40.0%
! ATTGCTGTGTTTTTCATGGC+AGG + Chr5:13810969-13810988 MsG0580025097.01.T01:three_prime_UTR 40.0%
! GTGAAGCTTCTGCTGATTAA+AGG + Chr5:13809619-13809638 MsG0580025097.01.T01:CDS 40.0%
! TCTCAAGAGACTGTTGGTTA+TGG - Chr5:13808843-13808862 None:intergenic 40.0%
! TTGTGGATTACGAACAAGTG+TGG - Chr5:13806449-13806468 None:intergenic 40.0%
! TTTTGTGTATAGGTCGTCCT+AGG + Chr5:13808230-13808249 MsG0580025097.01.T01:intron 40.0%
!! AATAGAAGCGGGCTGAATAT+AGG + Chr5:13809998-13810017 MsG0580025097.01.T01:intron 40.0%
!! AATCCTAGATGGGCTGTTTA+TGG + Chr5:13807039-13807058 MsG0580025097.01.T01:CDS 40.0%
!! ACTTCCTTGGTGATGATGTA+TGG + Chr5:13807672-13807691 MsG0580025097.01.T01:intron 40.0%
!! ATCCTAGATGGGCTGTTTAT+GGG + Chr5:13807040-13807059 MsG0580025097.01.T01:CDS 40.0%
!! GCTGTTTTCATAAGCTATCC+TGG + Chr5:13809132-13809151 MsG0580025097.01.T01:intron 40.0%
!! GTCTTTTGTTTGTCTCAGGA+TGG + Chr5:13810786-13810805 MsG0580025097.01.T01:intron 40.0%
!! TCATTTGCTGTGTCTTAGGA+TGG + Chr5:13809550-13809569 MsG0580025097.01.T01:intron 40.0%
!!! ACTGGTCATTGGGTTTTTTG+TGG + Chr5:13809755-13809774 MsG0580025097.01.T01:intron 40.0%
!!! CTGGTCATTGGGTTTTTTGT+GGG + Chr5:13809756-13809775 MsG0580025097.01.T01:intron 40.0%
!!! TTGGGTTTTTTGTGGGTTTG+TGG + Chr5:13809763-13809782 MsG0580025097.01.T01:intron 40.0%
AAGAGATTCGCCCATTAACC+AGG + Chr5:13810282-13810301 MsG0580025097.01.T01:intron 45.0%
ACAATGATGAATTCCCGGTG+AGG - Chr5:13808997-13809016 None:intergenic 45.0%
AGAGATTCGCCCATTAACCA+GGG + Chr5:13810283-13810302 MsG0580025097.01.T01:intron 45.0%
AGATTGAAACTTGCGAGGTG+TGG - Chr5:13806518-13806537 None:intergenic 45.0%
AGTGCCTAGGAATCCTAGAT+GGG + Chr5:13807029-13807048 MsG0580025097.01.T01:CDS 45.0%
CAACATAACACCAACACACG+AGG - Chr5:13810155-13810174 None:intergenic 45.0%
CAAGACGCACAAAAAACTCG+CGG - Chr5:13809836-13809855 None:intergenic 45.0%
CAATGATGAATTCCCGGTGA+GGG - Chr5:13808996-13809015 None:intergenic 45.0%
CAGTGATTGTTCACCAGACA+TGG - Chr5:13808331-13808350 None:intergenic 45.0%
CGAGTTTCTCAAGAGACTGT+TGG - Chr5:13808849-13808868 None:intergenic 45.0%
CTACGTGTCAGTGTCGTATA+TGG + Chr5:13807290-13807309 MsG0580025097.01.T01:intron 45.0%
GAAGTAGCAACTGACAAGTC+TGG - Chr5:13808298-13808317 None:intergenic 45.0%
GACTCTGCTGCTATGAAAAC+TGG + Chr5:13807108-13807127 MsG0580025097.01.T01:CDS 45.0%
GCAAGCAGCTCTTCAGAATA+TGG + Chr5:13810994-13811013 MsG0580025097.01.T01:three_prime_UTR 45.0%
GCATATTTCCATAAGCTCCC+AGG - Chr5:13809153-13809172 None:intergenic 45.0%
GGAAAGACTTCCCTGGTTAA+TGG - Chr5:13810296-13810315 None:intergenic 45.0%
GTCGGCTACATAAACAACCT+AGG + Chr5:13808049-13808068 MsG0580025097.01.T01:intron 45.0%
GTGGTCCACAAAAGAGTAAG+AGG - Chr5:13809514-13809533 None:intergenic 45.0%
TAAGCTATCCTGGGAGCTTA+TGG + Chr5:13809142-13809161 MsG0580025097.01.T01:intron 45.0%
TAGTGCCTAGGAATCCTAGA+TGG + Chr5:13807028-13807047 MsG0580025097.01.T01:CDS 45.0%
TATGTGCTGGAAACAGGATG+GGG + Chr5:13809362-13809381 MsG0580025097.01.T01:intron 45.0%
TCACTAAAGAAGCAAGTGCC+TGG - Chr5:13810389-13810408 None:intergenic 45.0%
TCGTCCTAGGTTGTTTACCA+GGG + Chr5:13808243-13808262 MsG0580025097.01.T01:CDS 45.0%
TCTGCTGCTATGAAAACTGG+AGG + Chr5:13807111-13807130 MsG0580025097.01.T01:CDS 45.0%
TGACTTAGGAAAGACTTCCC+TGG - Chr5:13810303-13810322 None:intergenic 45.0%
TGCCATCCATTAGGTACCAA+AGG - Chr5:13807988-13808007 None:intergenic 45.0%
TGTTTATGGGAGAGGTTTCG+AGG + Chr5:13807053-13807072 MsG0580025097.01.T01:CDS 45.0%
TTCTTCTTATCCCCGTCTGT+CGG - Chr5:13810902-13810921 None:intergenic 45.0%
! AAAGAGGGTTGATTCCTTCG+AGG + Chr5:13806872-13806891 MsG0580025097.01.T01:CDS 45.0%
! AAGAGGGTTGATTCCTTCGA+GGG + Chr5:13806873-13806892 MsG0580025097.01.T01:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr5:13808027-13808046 MsG0580025097.01.T01:intron 45.0%
! ATGGAGAGAAGAAGAGTGTG+TGG - Chr5:13806474-13806493 None:intergenic 45.0%
! ATTGGCTCAGTTGAAGCCTT+TGG + Chr5:13806936-13806955 MsG0580025097.01.T01:CDS 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr5:13808026-13808045 MsG0580025097.01.T01:intron 45.0%
! CTACGTGTCATTGTCACATC+TGG + Chr5:13807436-13807455 MsG0580025097.01.T01:intron 45.0%
! CTTGCAGCAAAAGTGTGCAA+AGG - Chr5:13808624-13808643 None:intergenic 45.0%
! GTTGATTCCTTCGAGGGATA+TGG + Chr5:13806879-13806898 MsG0580025097.01.T01:CDS 45.0%
! TGGAGAGAAGAAGAGTGTGT+GGG - Chr5:13806473-13806492 None:intergenic 45.0%
! TTGCACACTTTTGCTGCAAG+CGG + Chr5:13808624-13808643 MsG0580025097.01.T01:CDS 45.0%
!! AGGTGCTTTTAATGGGTCGT+TGG + Chr5:13810018-13810037 MsG0580025097.01.T01:intron 45.0%
!! CAGTTGAAGCCTTTGGTTCT+TGG + Chr5:13806943-13806962 MsG0580025097.01.T01:CDS 45.0%
!! CTCGTGTGTTGGTGTTATGT+TGG + Chr5:13810153-13810172 MsG0580025097.01.T01:intron 45.0%
!! GAAGCCTTTGGTTCTTGGTA+AGG + Chr5:13806948-13806967 MsG0580025097.01.T01:CDS 45.0%
!! TATTGTTTAGGGTGCCGTTC+TGG + Chr5:13807480-13807499 MsG0580025097.01.T01:intron 45.0%
!! TGGTGCTACTTCACAACCTT+TGG + Chr5:13807969-13807988 MsG0580025097.01.T01:intron 45.0%
ACGAGGTTGTTGTCGGAAGT+TGG - Chr5:13806673-13806692 None:intergenic 50.0%
ATACGTGTCAGCCACCAGAA+CGG - Chr5:13807497-13807516 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr5:13808028-13808047 None:intergenic 50.0%
CTCCCATAAACAGCCCATCT+AGG - Chr5:13807045-13807064 None:intergenic 50.0%
CTCGACCTTTGCCTTTACTC+TGG + Chr5:13810819-13810838 MsG0580025097.01.T01:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr5:13808031-13808050 MsG0580025097.01.T01:intron 50.0%
GAATGCCTGAGTTGCTTCGT+AGG - Chr5:13810071-13810090 None:intergenic 50.0%
GACTGTCTTGTCTTCGAGGA+AGG + Chr5:13806625-13806644 MsG0580025097.01.T01:CDS 50.0%
GAGTAAAGGCAAAGGTCGAG+TGG - Chr5:13810819-13810838 None:intergenic 50.0%
GCCTTATCACTTCTCCTGCA+AGG - Chr5:13810523-13810542 None:intergenic 50.0%
GCCTTGCAGGAGAAGTGATA+AGG + Chr5:13810519-13810538 MsG0580025097.01.T01:intron 50.0%
GTCGTCCTAGGTTGTTTACC+AGG + Chr5:13808242-13808261 MsG0580025097.01.T01:CDS 50.0%
GTTGTTTACCAGGGAGGAGA+GGG + Chr5:13808252-13808271 MsG0580025097.01.T01:CDS 50.0%
TCCTAGGTTGTTTACCAGGG+AGG + Chr5:13808246-13808265 MsG0580025097.01.T01:CDS 50.0%
TCCTCCCTGGTAAACAACCT+AGG - Chr5:13808250-13808269 None:intergenic 50.0%
TCTTCTTATCCCCGTCTGTC+GGG - Chr5:13810901-13810920 None:intergenic 50.0%
TTATAGACGCTCCCGACAGA+CGG + Chr5:13810887-13810906 MsG0580025097.01.T01:CDS 50.0%
TTGCTGTGTCTTAGGATGGC+TGG + Chr5:13809554-13809573 MsG0580025097.01.T01:intron 50.0%
! AAGAAGAGTGTGTGGGGTTG+TGG - Chr5:13806466-13806485 None:intergenic 50.0%
! ACAGCCCATCTAGGATTCCT+AGG - Chr5:13807036-13807055 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr5:13808025-13808044 MsG0580025097.01.T01:intron 50.0%
! GGAGAGAAGAAGAGTGTGTG+GGG - Chr5:13806472-13806491 None:intergenic 50.0%
!! AAGGTGGGTTGAGTGATGAG+AGG + Chr5:13807004-13807023 MsG0580025097.01.T01:CDS 50.0%
!! AGATGGGCTGTTTATGGGAG+AGG + Chr5:13807045-13807064 MsG0580025097.01.T01:CDS 50.0%
!! AGGTGGGTTGAGTGATGAGA+GGG + Chr5:13807005-13807024 MsG0580025097.01.T01:CDS 50.0%
AATCTCAGTCCTCGCCTTGC+AGG + Chr5:13810506-13810525 MsG0580025097.01.T01:intron 55.0%
ATCACTTCTCCTGCAAGGCG+AGG - Chr5:13810518-13810537 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - Chr5:13808040-13808059 None:intergenic 55.0%
CAACAAATCCCTCTCCTCCC+TGG - Chr5:13808263-13808282 None:intergenic 55.0%
CAGGTGCGCTTGACACGTAA+TGG + Chr5:13807232-13807251 MsG0580025097.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr5:13808033-13808052 None:intergenic 55.0%
CGGAGACTGTCTTGTCTTCG+AGG + Chr5:13806621-13806640 MsG0580025097.01.T01:CDS 55.0%
GGTTGTTTACCAGGGAGGAG+AGG + Chr5:13808251-13808270 MsG0580025097.01.T01:CDS 55.0%
GTGATGAGAGGGTAGTGCCT+AGG + Chr5:13807016-13807035 MsG0580025097.01.T01:CDS 55.0%
TATAGACGCTCCCGACAGAC+GGG + Chr5:13810888-13810907 MsG0580025097.01.T01:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr5:13808039-13808058 None:intergenic 55.0%
!! GTCTGTCGGGAGCGTCTATA+AGG - Chr5:13810888-13810907 None:intergenic 55.0%
!! TGTTTAGGGTGCCGTTCTGG+TGG + Chr5:13807483-13807502 MsG0580025097.01.T01:intron 55.0%
ATAGACGCTCCCGACAGACG+GGG + Chr5:13810889-13810908 MsG0580025097.01.T01:CDS 60.0%
GATGAATTCCCGGTGAGGGC+AGG - Chr5:13808992-13809011 None:intergenic 60.0%
CGTGCTCTTCCTGCCCTCAC+CGG + Chr5:13808980-13808999 MsG0580025097.01.T01:intron 65.0%
GTGCTCTTCCTGCCCTCACC+GGG + Chr5:13808981-13809000 MsG0580025097.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 13806332 13811162 13806332 ID=MsG0580025097.01;Name=MsG0580025097.01
Chr5 mRNA 13806332 13811162 13806332 ID=MsG0580025097.01.T01;Parent=MsG0580025097.01;Name=MsG0580025097.01.T01;_AED=0.33;_eAED=0.33;_QI=71|1|1|1|0.85|0.75|8|215|441
Chr5 exon 13806332 13807132 13806332 ID=MsG0580025097.01.T01:exon:5642;Parent=MsG0580025097.01.T01
Chr5 exon 13808242 13808318 13808242 ID=MsG0580025097.01.T01:exon:5643;Parent=MsG0580025097.01.T01
Chr5 exon 13808609 13808707 13808609 ID=MsG0580025097.01.T01:exon:5644;Parent=MsG0580025097.01.T01
Chr5 exon 13808794 13808892 13808794 ID=MsG0580025097.01.T01:exon:5645;Parent=MsG0580025097.01.T01
Chr5 exon 13809378 13809476 13809378 ID=MsG0580025097.01.T01:exon:5646;Parent=MsG0580025097.01.T01
Chr5 exon 13809568 13809666 13809568 ID=MsG0580025097.01.T01:exon:5647;Parent=MsG0580025097.01.T01
Chr5 exon 13810804 13811116 13810804 ID=MsG0580025097.01.T01:exon:5648;Parent=MsG0580025097.01.T01
Chr5 exon 13811138 13811162 13811138 ID=MsG0580025097.01.T01:exon:5649;Parent=MsG0580025097.01.T01
Chr5 five_prime_UTR 13806332 13806402 13806332 ID=MsG0580025097.01.T01:five_prime_utr;Parent=MsG0580025097.01.T01
Chr5 CDS 13806403 13807132 13806403 ID=MsG0580025097.01.T01:cds;Parent=MsG0580025097.01.T01
Chr5 CDS 13808242 13808318 13808242 ID=MsG0580025097.01.T01:cds;Parent=MsG0580025097.01.T01
Chr5 CDS 13808609 13808707 13808609 ID=MsG0580025097.01.T01:cds;Parent=MsG0580025097.01.T01
Chr5 CDS 13808794 13808892 13808794 ID=MsG0580025097.01.T01:cds;Parent=MsG0580025097.01.T01
Chr5 CDS 13809378 13809476 13809378 ID=MsG0580025097.01.T01:cds;Parent=MsG0580025097.01.T01
Chr5 CDS 13809568 13809666 13809568 ID=MsG0580025097.01.T01:cds;Parent=MsG0580025097.01.T01
Chr5 CDS 13810804 13810926 13810804 ID=MsG0580025097.01.T01:cds;Parent=MsG0580025097.01.T01
Chr5 three_prime_UTR 13810927 13811116 13810927 ID=MsG0580025097.01.T01:three_prime_utr;Parent=MsG0580025097.01.T01
Chr5 three_prime_UTR 13811138 13811162 13811138 ID=MsG0580025097.01.T01:three_prime_utr;Parent=MsG0580025097.01.T01
Gene Sequence

>MsG0580025097.01.T01

ATGTTGTCAATTGCAACAAGAACAACAAAAATGTTCAATTTTTCCACACTTGTTCGTAATCCACAACCCCACACACTCTTCTTCTCTCCATTCCCTTCTTCTTCTTCTTCTTCCACACCTCGCAAGTTTCAATCTTTTCAATCTCTCACAAACCGCAACTTCCACAAAATTCTCTCTTCATCACACCAACATGACAACAACTACGAAGAACACATCATCGGAGACTGTCTTGTCTTCGAGGAAGGCATTTTCGAAGACCCCATTTTTCCAACTTCCGACAACAACCTCGTAAACAACAAAAAACCAAAACCAATTTCAATTTCAAAGAAGAAAAAGAAGACAGTGGTAAAGTCCGAGAATCTTGTTCCTGATAAATGGAAAGAAGTTCAAGCAGAGATAAACATAACGAAGAAAGAACGGCGTAAGATAGCTCAAGAGATTGAGTTTAATAGTAAAGTTATGAAGAAGAAAAGAGGGTTGATTCCTTCGAGGGATATGGATTTGAATGAGTATAAGGCTTATAAAGAAGCTAAATTGGCTCAGTTGAAGCCTTTGGTTCTTGGTAAGGTTTTTGCTGAGAAAGAAGATGATGAAGAAGAAGAAGGTGGGTTGAGTGATGAGAGGGTAGTGCCTAGGAATCCTAGATGGGCTGTTTATGGGAGAGGTTTCGAGGATGTTAATGAGTTTTTGAATAGTGAGAGTTATGACTCTGCTGCTATGAAAACTGGAGGTCGTCCTAGGTTGTTTACCAGGGAGGAGAGGGATTTGTTGAGTAAGAAAAAGCCAGACTTGTCAGTTGCTACTTCAGATAAATGGCTTCCTTTGCACACTTTTGCTGCAAGCGGAGAATCTTTACTTTTAGAATCTTTGTTGCGGCATGATGTTGATATTAATGTTATGGATAAGGATGGTTTGACCGCTCTTTACAAAGCGGTAATTGGAAGAAAGCATGCCATAACCAACAGTCTCTTGAGAAACTCGGCGAATCCGTTTGTGCAAGATAATGATGGGGCCACCTTGATTCACTATGCTGTACAAACAGCGTCTGTCCGAACAATTAAAGTACTCTTGTTGTACAATGTGGATATAAATCTTCAGGACAATGATGGCTGGACACCATTACATCTTGCTGTTCAGACTCAGAGAACTGATATAGTGAAGCTTCTGCTGATTAAAGGTGCTGATCAGAAATTAAAAAACAAGGATGGTTTAACTCCACTCGACCTTTGCCTTTACTCTGGTCAAAATGTCAGAACATATGAGTTAATCAAGTTGTTGAAACAGCCTTATAGACGCTCCCGACAGACGGGGATAAGAAGAAAATAA

Protein sequence

>MsG0580025097.01.T01

MLSIATRTTKMFNFSTLVRNPQPHTLFFSPFPSSSSSSTPRKFQSFQSLTNRNFHKILSSSHQHDNNYEEHIIGDCLVFEEGIFEDPIFPTSDNNLVNNKKPKPISISKKKKKTVVKSENLVPDKWKEVQAEINITKKERRKIAQEIEFNSKVMKKKRGLIPSRDMDLNEYKAYKEAKLAQLKPLVLGKVFAEKEDDEEEEGGLSDERVVPRNPRWAVYGRGFEDVNEFLNSESYDSAAMKTGGRPRLFTREERDLLSKKKPDLSVATSDKWLPLHTFAASGESLLLESLLRHDVDINVMDKDGLTALYKAVIGRKHAITNSLLRNSANPFVQDNDGATLIHYAVQTASVRTIKVLLLYNVDINLQDNDGWTPLHLAVQTQRTDIVKLLLIKGADQKLKNKDGLTPLDLCLYSGQNVRTYELIKLLKQPYRRSRQTGIRRK*