Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008980 | sp|O82316|TIP41_ARATH | 75.102 | 245 | 61 | 0 | 1 | 245 | 1 | 245 | 9.73e-127 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008980 | Msa0038010 | 0.805750 | 1.147960e-49 | -8.615850e-47 |
| Msa0008980 | Msa0058740 | 0.905371 | 4.608675e-80 | -8.615850e-47 |
| Msa0008980 | Msa0079840 | -0.800927 | 1.145333e-48 | -8.615850e-47 |
| Msa0008980 | Msa0150000 | 0.871796 | 5.200803e-67 | -8.615850e-47 |
| Msa0008980 | Msa0163690 | 0.802360 | 5.821747e-49 | -8.615850e-47 |
| Msa0008980 | Msa0199440 | 0.813851 | 2.076254e-51 | -8.615850e-47 |
| Msa0008980 | Msa0224870 | 0.813005 | 3.185923e-51 | -8.615850e-47 |
| Msa0008980 | Msa0244310 | 0.801408 | 9.133281e-49 | -8.615850e-47 |
| Msa0008980 | Msa0245660 | 0.831367 | 1.737679e-55 | -8.615850e-47 |
| Msa0008980 | Msa0248320 | 0.800832 | 1.197499e-48 | -8.615850e-47 |
| Msa0008980 | Msa0266140 | -0.800010 | 1.761375e-48 | -8.615850e-47 |
| Msa0008980 | Msa0279810 | 0.806199 | 9.236448e-50 | -8.615850e-47 |
| Msa0008980 | Msa0280160 | 0.818592 | 1.808901e-52 | -8.615850e-47 |
| Msa0008980 | Msa0282830 | 0.802411 | 5.683141e-49 | -8.615850e-47 |
| Msa0008980 | Msa0287480 | 0.807949 | 3.936260e-50 | -8.615850e-47 |
| Msa0008980 | Msa0319220 | 0.808319 | 3.283042e-50 | -8.615850e-47 |
| Msa0008980 | Msa0331190 | 0.820058 | 8.381509e-53 | -8.615850e-47 |
| Msa0008980 | Msa0333770 | 0.818845 | 1.584476e-52 | -8.615850e-47 |
| Msa0008980 | Msa0357470 | 0.809401 | 1.926965e-50 | -8.615850e-47 |
| Msa0008980 | Msa0357510 | 0.805382 | 1.371517e-49 | -8.615850e-47 |
| Msa0008980 | Msa0357530 | 0.803835 | 2.883314e-49 | -8.615850e-47 |
| Msa0008980 | Msa0364030 | -0.803140 | 4.017933e-49 | -8.615850e-47 |
| Msa0008980 | Msa0403740 | -0.802945 | 4.409607e-49 | -8.615850e-47 |
| Msa0008980 | Msa0414480 | 0.824837 | 6.501758e-54 | -8.615850e-47 |
| Msa0008980 | Msa0415010 | 0.801813 | 7.544232e-49 | -8.615850e-47 |
| Msa0008980 | Msa0449500 | 0.813528 | 2.445779e-51 | -8.615850e-47 |
| Msa0008980 | Msa0459930 | 0.817770 | 2.775706e-52 | -8.615850e-47 |
| Msa0008980 | Msa0464620 | 0.801908 | 7.211091e-49 | -8.615850e-47 |
| Msa0008980 | Msa0491780 | 0.817303 | 3.536316e-52 | -8.615850e-47 |
| Msa0008980 | Msa0497680 | 0.801881 | 7.302897e-49 | -8.615850e-47 |
| Msa0008980 | Msa0510050 | 0.811957 | 5.397783e-51 | -8.615850e-47 |
| Msa0008980 | Msa0531040 | 0.814622 | 1.402661e-51 | -8.615850e-47 |
| Msa0008980 | Msa0546590 | 0.815072 | 1.114808e-51 | -8.615850e-47 |
| Msa0008980 | Msa0567330 | 0.805675 | 1.190216e-49 | -8.615850e-47 |
| Msa0008980 | Msa0567570 | 0.801960 | 7.036232e-49 | -8.615850e-47 |
| Msa0008980 | Msa0580410 | -0.801880 | 7.308090e-49 | -8.615850e-47 |
| Msa0008980 | Msa0587930 | 0.820740 | 5.848025e-53 | -8.615850e-47 |
| Msa0008980 | Msa0591490 | 0.804940 | 1.696996e-49 | -8.615850e-47 |
| Msa0008980 | Msa0604280 | 0.802412 | 5.679553e-49 | -8.615850e-47 |
| Msa0008980 | Msa0672950 | 0.803732 | 3.028639e-49 | -8.615850e-47 |
| Msa0008980 | Msa0680460 | 0.803665 | 3.127951e-49 | -8.615850e-47 |
| Msa0008980 | Msa0689840 | 0.805266 | 1.450214e-49 | -8.615850e-47 |
| Msa0008980 | Msa0709790 | 0.802317 | 5.941637e-49 | -8.615850e-47 |
| Msa0008980 | Msa0716980 | 0.801271 | 9.740454e-49 | -8.615850e-47 |
| Msa0008980 | Msa0717030 | 0.804899 | 1.730613e-49 | -8.615850e-47 |
| Msa0008980 | Msa0754020 | -0.805299 | 1.427255e-49 | -8.615850e-47 |
| Msa0008980 | Msa0758880 | -0.801920 | 7.170562e-49 | -8.615850e-47 |
| Msa0008980 | Msa0772160 | -0.806816 | 6.844062e-50 | -8.615850e-47 |
| Msa0008980 | Msa0801920 | -0.802275 | 6.060557e-49 | -8.615850e-47 |
| Msa0008980 | Msa0812720 | 0.804884 | 1.743073e-49 | -8.615850e-47 |
| Msa0008980 | Msa0833030 | -0.811608 | 6.431111e-51 | -8.615850e-47 |
| Msa0008980 | Msa0838120 | -0.802082 | 6.639736e-49 | -8.615850e-47 |
| Msa0008980 | Msa0841930 | 0.800917 | 1.150984e-48 | -8.615850e-47 |
| Msa0008980 | Msa0873880 | 0.800975 | 1.120079e-48 | -8.615850e-47 |
| Msa0008980 | Msa0890210 | 0.812809 | 3.516379e-51 | -8.615850e-47 |
| Msa0008980 | Msa0896920 | 0.810049 | 1.397936e-50 | -8.615850e-47 |
| Msa0008980 | Msa0898970 | 0.809087 | 2.250438e-50 | -8.615850e-47 |
| Msa0008980 | Msa0906680 | 0.802361 | 5.819818e-49 | -8.615850e-47 |
| Msa0008980 | Msa0950090 | 0.804149 | 2.481845e-49 | -8.615850e-47 |
| Msa0008980 | Msa0964510 | 0.805240 | 1.468774e-49 | -8.615850e-47 |
| Msa0008980 | Msa0975950 | 0.840604 | 7.866504e-58 | -8.615850e-47 |
| Msa0008980 | Msa0993710 | 0.809942 | 1.474075e-50 | -8.615850e-47 |
| Msa0008980 | Msa0996980 | 0.800473 | 1.417569e-48 | -8.615850e-47 |
| Msa0008980 | Msa1006030 | 0.831483 | 1.626852e-55 | -8.615850e-47 |
| Msa0008980 | Msa1024480 | 0.821151 | 4.702004e-53 | -8.615850e-47 |
| Msa0008980 | Msa1029860 | 0.805392 | 1.365058e-49 | -8.615850e-47 |
| Msa0008980 | Msa1044050 | -0.803166 | 3.968648e-49 | -8.615850e-47 |
| Msa0008980 | Msa1049400 | 0.821498 | 3.911014e-53 | -8.615850e-47 |
| Msa0008980 | Msa1061670 | 0.809442 | 1.887974e-50 | -8.615850e-47 |
| Msa0008980 | Msa1062060 | 0.801222 | 9.967157e-49 | -8.615850e-47 |
| Msa0008980 | Msa1064940 | 0.801825 | 7.498346e-49 | -8.615850e-47 |
| Msa0008980 | Msa1075030 | 0.813027 | 3.150452e-51 | -8.615850e-47 |
| Msa0008980 | Msa1100330 | 0.811152 | 8.076427e-51 | -8.615850e-47 |
| Msa0008980 | Msa1106960 | 0.812828 | 3.483378e-51 | -8.615850e-47 |
| Msa0008980 | Msa1107220 | 0.802131 | 6.487958e-49 | -8.615850e-47 |
| Msa0008980 | Msa1111910 | 0.805068 | 1.595625e-49 | -8.615850e-47 |
| Msa0008980 | Msa1115900 | 0.820253 | 7.562990e-53 | -8.615850e-47 |
| Msa0008980 | Msa1132880 | -0.801301 | 9.607015e-49 | -8.615850e-47 |
| Msa0008980 | Msa1160540 | 0.807605 | 4.658776e-50 | -8.615850e-47 |
| Msa0008980 | Msa1162370 | 0.809063 | 2.276941e-50 | -8.615850e-47 |
| Msa0008980 | Msa1191270 | 0.825376 | 4.848887e-54 | -8.615850e-47 |
| Msa0008980 | Msa1206330 | 0.800804 | 1.213886e-48 | -8.615850e-47 |
| Msa0008980 | Msa1269500 | 0.818012 | 2.447400e-52 | -8.615850e-47 |
| Msa0008980 | Msa1273320 | 0.828551 | 8.443340e-55 | -8.615850e-47 |
| Msa0008980 | Msa1281780 | 0.834462 | 2.956331e-56 | -8.615850e-47 |
| Msa0008980 | Msa1319010 | 0.812826 | 3.486316e-51 | -8.615850e-47 |
| Msa0008980 | Msa1321010 | 0.804382 | 2.218776e-49 | -8.615850e-47 |
| Msa0008980 | Msa1357840 | 0.812696 | 3.723602e-51 | -8.615850e-47 |
| Msa0008980 | Msa1376880 | 0.813591 | 2.368247e-51 | -8.615850e-47 |
| Msa0008980 | Msa1407810 | 0.805672 | 1.192480e-49 | -8.615850e-47 |
| Msa0008980 | Msa1408860 | -0.800483 | 1.410873e-48 | -8.615850e-47 |
| Msa0008980 | Msa1417220 | 0.815416 | 9.350653e-52 | -8.615850e-47 |
| Msa0008980 | Msa1437780 | 0.806924 | 6.493154e-50 | -8.615850e-47 |
| Msa0008980 | Msa1459680 | -0.802870 | 4.568940e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008980 | MtrunA17_Chr1g0146171 | 93.117 | 247 | 17 | 0 | 1 | 247 | 1 | 247 | 6.78e-168 | 463 |
| Msa0008980 | MtrunA17_Chr1g0146161 | 86.235 | 247 | 34 | 0 | 1 | 247 | 1 | 247 | 3.38e-156 | 433 |
| Msa0008980 | MtrunA17_Chr8g0340161 | 53.226 | 248 | 110 | 3 | 1 | 243 | 1 | 247 | 7.07e-85 | 253 |
| Msa0008980 | MtrunA17_Chr2g0331261 | 51.639 | 244 | 114 | 2 | 4 | 243 | 5 | 248 | 6.40e-83 | 248 |
| Msa0008980 | MtrunA17_Chr4g0030861 | 50.417 | 240 | 115 | 2 | 1 | 236 | 3 | 242 | 8.93e-77 | 232 |
| Msa0008980 | MtrunA17_Chr1g0212671 | 48.148 | 243 | 121 | 3 | 3 | 240 | 5 | 247 | 1.81e-74 | 226 |
| Msa0008980 | MtrunA17_Chr7g0264961 | 51.867 | 241 | 111 | 3 | 1 | 237 | 3 | 242 | 2.69e-74 | 226 |
| Msa0008980 | MtrunA17_Chr5g0399341 | 48.996 | 249 | 119 | 4 | 1 | 244 | 1 | 246 | 3.58e-74 | 226 |
| Msa0008980 | MtrunA17_Chr7g0222791 | 50.206 | 243 | 116 | 3 | 3 | 240 | 5 | 247 | 9.91e-72 | 219 |
| Msa0008980 | MtrunA17_Chr1g0188771 | 42.520 | 254 | 135 | 3 | 2 | 244 | 4 | 257 | 1.49e-66 | 206 |
| Msa0008980 | MtrunA17_Chr6g0478191 | 43.825 | 251 | 133 | 3 | 2 | 244 | 4 | 254 | 3.72e-66 | 205 |
| Msa0008980 | MtrunA17_Chr4g0020781 | 41.765 | 170 | 98 | 1 | 63 | 232 | 27 | 195 | 4.32e-41 | 140 |
| Msa0008980 | MtrunA17_Chr5g0426131 | 34.351 | 262 | 140 | 8 | 3 | 247 | 14 | 260 | 2.74e-32 | 119 |
| Msa0008980 | MtrunA17_Chr2g0326621 | 34.363 | 259 | 134 | 11 | 10 | 241 | 31 | 280 | 6.89e-31 | 115 |
| Msa0008980 | MtrunA17_Chr7g0264111 | 34.818 | 247 | 136 | 9 | 9 | 234 | 29 | 271 | 2.79e-30 | 114 |
| Msa0008980 | MtrunA17_Chr4g0029071 | 34.601 | 263 | 127 | 13 | 10 | 241 | 30 | 278 | 1.14e-28 | 109 |
| Msa0008980 | MtrunA17_Chr1g0199731 | 33.466 | 251 | 132 | 10 | 10 | 234 | 30 | 271 | 8.46e-28 | 107 |
| Msa0008980 | MtrunA17_Chr2g0284611 | 34.764 | 233 | 143 | 6 | 18 | 247 | 37 | 263 | 1.57e-27 | 106 |
| Msa0008980 | MtrunA17_Chr5g0435051 | 35.652 | 230 | 139 | 7 | 18 | 245 | 39 | 261 | 2.52e-27 | 105 |
| Msa0008980 | MtrunA17_Chr3g0145671 | 33.617 | 235 | 129 | 10 | 19 | 234 | 37 | 263 | 4.55e-27 | 105 |
| Msa0008980 | MtrunA17_Chr4g0006001 | 35.217 | 230 | 123 | 9 | 19 | 229 | 56 | 278 | 1.98e-26 | 103 |
| Msa0008980 | MtrunA17_Chr3g0079421 | 35.616 | 219 | 128 | 8 | 18 | 232 | 25 | 234 | 5.12e-26 | 102 |
| Msa0008980 | MtrunA17_Chr5g0397391 | 34.335 | 233 | 122 | 9 | 19 | 229 | 52 | 275 | 7.59e-26 | 102 |
| Msa0008980 | MtrunA17_Chr4g0001221 | 35.122 | 205 | 113 | 7 | 24 | 220 | 80 | 272 | 8.72e-26 | 102 |
| Msa0008980 | MtrunA17_Chr1g0201331 | 35.981 | 214 | 118 | 7 | 19 | 225 | 74 | 275 | 9.45e-26 | 102 |
| Msa0008980 | MtrunA17_Chr2g0284591 | 33.333 | 249 | 156 | 7 | 2 | 247 | 20 | 261 | 2.23e-25 | 100 |
| Msa0008980 | MtrunA17_Chr8g0386961 | 34.034 | 238 | 125 | 10 | 19 | 234 | 52 | 279 | 5.28e-25 | 100 |
| Msa0008980 | MtrunA17_Chr2g0333771 | 35.784 | 204 | 113 | 7 | 24 | 220 | 85 | 277 | 3.17e-24 | 98.6 |
| Msa0008980 | MtrunA17_Chr2g0284631 | 34.222 | 225 | 137 | 8 | 18 | 239 | 90 | 306 | 3.86e-24 | 98.6 |
| Msa0008980 | MtrunA17_Chr5g0436701 | 34.025 | 241 | 128 | 10 | 10 | 228 | 46 | 277 | 4.52e-23 | 95.1 |
| Msa0008980 | MtrunA17_Chr3g0113211 | 30.612 | 245 | 142 | 8 | 10 | 234 | 46 | 282 | 5.58e-23 | 94.7 |
| Msa0008980 | MtrunA17_Chr1g0184541 | 32.877 | 219 | 138 | 6 | 16 | 232 | 59 | 270 | 8.79e-23 | 94.4 |
| Msa0008980 | MtrunA17_Chr8g0379911 | 32.510 | 243 | 152 | 9 | 1 | 240 | 21 | 254 | 1.04e-22 | 93.6 |
| Msa0008980 | MtrunA17_Chr7g0217331 | 33.175 | 211 | 135 | 4 | 19 | 228 | 37 | 242 | 2.09e-22 | 92.8 |
| Msa0008980 | MtrunA17_Chr8g0379901 | 31.858 | 226 | 143 | 8 | 18 | 240 | 38 | 255 | 1.99e-21 | 90.5 |
| Msa0008980 | MtrunA17_Chr4g0044201 | 32.677 | 254 | 138 | 12 | 1 | 240 | 6 | 240 | 1.03e-20 | 88.2 |
| Msa0008980 | MtrunA17_Chr2g0284581 | 31.556 | 225 | 138 | 7 | 7 | 221 | 19 | 237 | 5.53e-20 | 86.3 |
| Msa0008980 | MtrunA17_Chr2g0284601 | 33.511 | 188 | 118 | 5 | 36 | 220 | 5 | 188 | 9.05e-17 | 76.6 |
| Msa0008980 | MtrunA17_Chr4g0038591 | 28.731 | 268 | 159 | 8 | 3 | 247 | 36 | 294 | 7.52e-16 | 75.5 |
| Msa0008980 | MtrunA17_Chr4g0038611 | 31.319 | 182 | 101 | 4 | 73 | 234 | 41 | 218 | 1.69e-14 | 71.2 |
| Msa0008980 | MtrunA17_Chr6g0467461 | 31.481 | 108 | 55 | 2 | 125 | 232 | 4 | 92 | 3.62e-13 | 64.3 |
| Msa0008980 | MtrunA17_Chr8g0362451 | 34.409 | 93 | 42 | 2 | 140 | 232 | 8 | 81 | 4.99e-12 | 60.8 |
| Msa0008980 | MtrunA17_Chr4g0001111 | 32.414 | 145 | 82 | 5 | 24 | 161 | 80 | 215 | 5.68e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008980 | AT2G25810.1 | 75.102 | 245 | 61 | 0 | 1 | 245 | 1 | 245 | 9.89e-128 | 362 |
| Msa0008980 | AT2G36830.1 | 52.869 | 244 | 111 | 2 | 1 | 240 | 3 | 246 | 1.56e-85 | 255 |
| Msa0008980 | AT3G16240.1 | 52.033 | 246 | 111 | 4 | 1 | 240 | 1 | 245 | 3.90e-83 | 249 |
| Msa0008980 | AT3G26520.1 | 52.991 | 234 | 106 | 2 | 7 | 236 | 10 | 243 | 3.48e-81 | 244 |
| Msa0008980 | AT5G47450.1 | 51.477 | 237 | 111 | 2 | 1 | 233 | 1 | 237 | 2.47e-79 | 239 |
| Msa0008980 | AT4G17340.1 | 50.400 | 250 | 117 | 3 | 1 | 245 | 1 | 248 | 1.17e-76 | 232 |
| Msa0008980 | AT4G01470.1 | 48.594 | 249 | 123 | 3 | 1 | 244 | 3 | 251 | 1.95e-74 | 227 |
| Msa0008980 | AT1G73190.1 | 48.945 | 237 | 112 | 2 | 6 | 233 | 11 | 247 | 2.26e-70 | 217 |
| Msa0008980 | AT1G17810.1 | 46.875 | 256 | 119 | 3 | 6 | 244 | 11 | 266 | 3.47e-68 | 211 |
| Msa0008980 | AT3G47440.1 | 42.152 | 223 | 122 | 3 | 16 | 233 | 20 | 240 | 1.65e-49 | 163 |
| Msa0008980 | AT5G60660.1 | 33.730 | 252 | 144 | 9 | 10 | 241 | 30 | 278 | 1.52e-31 | 117 |
| Msa0008980 | AT4G35100.1 | 36.100 | 241 | 129 | 11 | 19 | 241 | 38 | 271 | 2.38e-30 | 114 |
| Msa0008980 | AT4G35100.2 | 36.100 | 241 | 129 | 11 | 19 | 241 | 38 | 271 | 2.38e-30 | 114 |
| Msa0008980 | AT2G37170.2 | 33.600 | 250 | 133 | 10 | 10 | 234 | 71 | 312 | 2.56e-30 | 115 |
| Msa0008980 | AT2G37180.1 | 34.137 | 249 | 137 | 10 | 10 | 236 | 28 | 271 | 3.39e-30 | 114 |
| Msa0008980 | AT2G37170.1 | 33.333 | 252 | 135 | 10 | 10 | 236 | 28 | 271 | 3.77e-30 | 114 |
| Msa0008980 | AT3G53420.1 | 34.874 | 238 | 132 | 10 | 19 | 236 | 39 | 273 | 1.29e-28 | 110 |
| Msa0008980 | AT3G53420.2 | 34.874 | 238 | 132 | 10 | 19 | 236 | 39 | 273 | 1.29e-28 | 110 |
| Msa0008980 | AT2G39010.1 | 32.520 | 246 | 141 | 9 | 10 | 234 | 29 | 270 | 1.47e-28 | 110 |
| Msa0008980 | AT3G54820.1 | 33.051 | 236 | 135 | 9 | 19 | 234 | 38 | 270 | 8.73e-28 | 107 |
| Msa0008980 | AT2G16850.1 | 33.061 | 245 | 141 | 10 | 19 | 246 | 36 | 274 | 6.91e-27 | 105 |
| Msa0008980 | AT1G80760.1 | 35.238 | 210 | 118 | 6 | 19 | 221 | 80 | 278 | 6.61e-26 | 103 |
| Msa0008980 | AT4G00430.1 | 34.934 | 229 | 125 | 9 | 19 | 229 | 53 | 275 | 1.15e-25 | 102 |
| Msa0008980 | AT1G01620.1 | 33.913 | 230 | 126 | 9 | 19 | 229 | 52 | 274 | 8.99e-25 | 99.8 |
| Msa0008980 | AT4G10380.1 | 34.222 | 225 | 130 | 6 | 19 | 236 | 78 | 291 | 1.94e-24 | 99.4 |
| Msa0008980 | AT5G37820.1 | 35.808 | 229 | 128 | 8 | 19 | 240 | 43 | 259 | 3.90e-24 | 98.2 |
| Msa0008980 | AT4G23400.1 | 33.913 | 230 | 126 | 9 | 19 | 229 | 53 | 275 | 4.83e-24 | 97.8 |
| Msa0008980 | AT5G37820.2 | 35.808 | 229 | 128 | 8 | 19 | 240 | 79 | 295 | 5.67e-24 | 98.2 |
| Msa0008980 | AT4G19030.1 | 33.621 | 232 | 138 | 8 | 18 | 240 | 54 | 278 | 5.80e-24 | 97.8 |
| Msa0008980 | AT3G61430.2 | 34.061 | 229 | 125 | 9 | 19 | 228 | 52 | 273 | 6.89e-24 | 97.4 |
| Msa0008980 | AT3G61430.1 | 34.061 | 229 | 125 | 9 | 19 | 228 | 52 | 273 | 6.89e-24 | 97.4 |
| Msa0008980 | AT2G45960.1 | 34.061 | 229 | 125 | 9 | 19 | 228 | 52 | 273 | 7.26e-24 | 97.4 |
| Msa0008980 | AT1G31885.1 | 35.681 | 213 | 123 | 5 | 18 | 221 | 42 | 249 | 1.54e-23 | 97.4 |
| Msa0008980 | AT4G18910.1 | 33.476 | 233 | 137 | 7 | 18 | 240 | 51 | 275 | 1.59e-23 | 96.7 |
| Msa0008980 | AT5G37810.1 | 35.000 | 240 | 132 | 9 | 12 | 240 | 33 | 259 | 1.88e-23 | 96.3 |
| Msa0008980 | AT1G52180.1 | 50.000 | 84 | 42 | 0 | 125 | 208 | 39 | 122 | 4.19e-23 | 91.3 |
| Msa0008980 | AT1G01620.2 | 33.014 | 209 | 118 | 8 | 36 | 229 | 1 | 202 | 5.58e-21 | 88.2 |
| Msa0008980 | AT3G06100.1 | 31.050 | 219 | 142 | 6 | 16 | 231 | 43 | 255 | 1.15e-20 | 88.6 |
| Msa0008980 | AT3G06100.2 | 31.905 | 210 | 134 | 6 | 24 | 230 | 3 | 206 | 1.26e-19 | 84.7 |
| Msa0008980 | AT1G31885.2 | 36.000 | 175 | 100 | 4 | 56 | 221 | 24 | 195 | 3.18e-19 | 84.7 |
| Msa0008980 | AT2G34390.1 | 30.000 | 220 | 141 | 6 | 18 | 229 | 47 | 261 | 9.55e-16 | 75.5 |
| Msa0008980 | AT2G45960.2 | 31.754 | 211 | 118 | 9 | 19 | 210 | 52 | 255 | 5.03e-15 | 73.2 |
| Msa0008980 | AT2G45960.3 | 31.754 | 211 | 118 | 9 | 19 | 210 | 52 | 255 | 5.77e-15 | 73.2 |
| Msa0008980 | AT2G34390.2 | 29.954 | 217 | 139 | 6 | 21 | 229 | 8 | 219 | 6.14e-15 | 72.4 |
| Msa0008980 | AT4G00430.2 | 32.927 | 164 | 93 | 7 | 19 | 171 | 53 | 210 | 7.94e-11 | 60.5 |
Find 78 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAGAAAGGAGGACTTTC+TGG | 0.139053 | 1_1:+13061961 | Msa0008980:CDS |
| ACAACAAATCCAACCAAAAT+TGG | 0.151579 | 1_1:-13061991 | None:intergenic |
| CTCATTGGTGGTGGGCTTGC+TGG | 0.168087 | 1_1:+13062135 | Msa0008980:CDS |
| CTGCTTTGGTTAGTGGAAAT+TGG | 0.185229 | 1_1:+13062082 | Msa0008980:CDS |
| TTCTGGACTTGGCCCAATTT+TGG | 0.189335 | 1_1:+13061978 | Msa0008980:CDS |
| CCAGAAAGTCCTCCTTTCTT+TGG | 0.192856 | 1_1:-13061961 | None:intergenic |
| ACCTTTCTCTTTGTCTTTGC+TGG | 0.204008 | 1_1:+13058113 | Msa0008980:CDS |
| GGTTGTTCCTAAAGACATTT+TGG | 0.242085 | 1_1:-13058036 | None:intergenic |
| ATGAATCCAGCAAGATCTTT+TGG | 0.260996 | 1_1:+13062057 | Msa0008980:CDS |
| CTCTTTGTCTTTGCTGGTGT+TGG | 0.290840 | 1_1:+13058119 | Msa0008980:CDS |
| ATTAGAGCTTGGATGCAATT+AGG | 0.307628 | 1_1:-13058074 | None:intergenic |
| ATATCCGCCGGTCACGTTTC+CGG | 0.326886 | 1_1:+13058666 | Msa0008980:CDS |
| TTTGGACCTGCTTTGGTTAG+TGG | 0.334512 | 1_1:+13062075 | Msa0008980:CDS |
| TTTGAATCCCGCCGTGACCT+TGG | 0.347716 | 1_1:+13058695 | Msa0008980:CDS |
| GGGCTAACATCTTGGCTGGC+GGG | 0.363981 | 1_1:+13062016 | Msa0008980:CDS |
| TTGAATCCCGCCGTGACCTT+GGG | 0.371209 | 1_1:+13058696 | Msa0008980:CDS |
| AATATGACCAAAATGTCTTT+AGG | 0.378363 | 1_1:+13058029 | None:intergenic |
| GGTGTACTCAAGGAGTAGTT+TGG | 0.378665 | 1_1:+13061884 | Msa0008980:CDS |
| GTTCACTGTGTATGCAACTA+TGG | 0.382620 | 1_1:+13061933 | Msa0008980:CDS |
| AAAAGATCTTGCTGGATTCA+TGG | 0.384219 | 1_1:-13062055 | None:intergenic |
| TCGTCCGTTCTATCTTATAT+TGG | 0.384445 | 1_1:+13058745 | Msa0008980:CDS |
| GTGACCTTGGGCCTCCTTGT+TGG | 0.384806 | 1_1:+13058708 | Msa0008980:CDS |
| TTGGCTGGCGGGGCTTTCGC+AGG | 0.386405 | 1_1:+13062027 | Msa0008980:CDS |
| TGTTGTAGGGGCTAACATCT+TGG | 0.405323 | 1_1:+13062008 | Msa0008980:CDS |
| TTGGGCCTCTCATTGGTGGT+GGG | 0.408100 | 1_1:+13062127 | Msa0008980:CDS |
| ATTAGGTTGAGTAGCCTCTT+GGG | 0.416839 | 1_1:-13058057 | None:intergenic |
| TGGGTTGGGCCTCTCATTGG+TGG | 0.430148 | 1_1:+13062123 | Msa0008980:CDS |
| GTTGGGCCTCTCATTGGTGG+TGG | 0.433600 | 1_1:+13062126 | Msa0008980:CDS |
| GCTAAGTGAAGATGGTTTAG+TGG | 0.434560 | 1_1:+13058596 | Msa0008980:CDS |
| CAACAAATCCAACCAAAATT+GGG | 0.439747 | 1_1:-13061990 | None:intergenic |
| AAAGGAGGACTTTCTGGACT+TGG | 0.441144 | 1_1:+13061967 | Msa0008980:CDS |
| GCAGGTCCAAAAGATCTTGC+TGG | 0.444089 | 1_1:-13062063 | None:intergenic |
| TATCTTCTTCATTACCTCAC+TGG | 0.445469 | 1_1:+13058801 | Msa0008980:CDS |
| TTAGATAAGCTAAGTGAAGA+TGG | 0.450182 | 1_1:+13058588 | Msa0008980:intron |
| TGGAAATTGGACTGACCAAT+GGG | 0.457985 | 1_1:+13062095 | Msa0008980:CDS |
| GGCTAACATCTTGGCTGGCG+GGG | 0.461965 | 1_1:+13062017 | Msa0008980:CDS |
| AATTAGGTTGAGTAGCCTCT+TGG | 0.462527 | 1_1:-13058058 | None:intergenic |
| AGGTCACGGCGGGATTCAAA+TGG | 0.475016 | 1_1:-13058692 | None:intergenic |
| GTGTACTCAAGGAGTAGTTT+GGG | 0.480313 | 1_1:+13061885 | Msa0008980:CDS |
| AACAAGGAGGCCCAAGGTCA+CGG | 0.484302 | 1_1:-13058706 | None:intergenic |
| CATACACTTAAAAGTGGAGT+AGG | 0.484564 | 1_1:+13061862 | Msa0008980:CDS |
| CTTCTTCATTACCTCACTGG+TGG | 0.484926 | 1_1:+13058804 | Msa0008980:CDS |
| CGAATTCAACAATTAGAGCT+TGG | 0.493298 | 1_1:-13058085 | None:intergenic |
| CCAGTTCATACACTTAAAAG+TGG | 0.496805 | 1_1:+13061856 | Msa0008980:CDS |
| GTGGAAATTGGACTGACCAA+TGG | 0.502211 | 1_1:+13062094 | Msa0008980:CDS |
| CTAAGTGAAGATGGTTTAGT+GGG | 0.510777 | 1_1:+13058597 | Msa0008980:CDS |
| ATGGCCACCGGAAACGTGAC+CGG | 0.514153 | 1_1:-13058673 | None:intergenic |
| GGGGCTAACATCTTGGCTGG+CGG | 0.514242 | 1_1:+13062015 | Msa0008980:CDS |
| ACCTTGGGCCTCCTTGTTGG+CGG | 0.515259 | 1_1:+13058711 | Msa0008980:CDS |
| CGGTGATGTGGCCGCCAACA+AGG | 0.518058 | 1_1:-13058722 | None:intergenic |
| AGGAGGCCCAAGGTCACGGC+GGG | 0.520183 | 1_1:-13058702 | None:intergenic |
| GTAGGGGCTAACATCTTGGC+TGG | 0.532312 | 1_1:+13062012 | Msa0008980:CDS |
| GTGACCGGCGGATATCATTA+CGG | 0.543565 | 1_1:-13058658 | None:intergenic |
| GATCAACATATAGCATCTGC+AGG | 0.544628 | 1_1:+13058771 | Msa0008980:CDS |
| ACCAGCAAAGACAAAGAGAA+AGG | 0.549120 | 1_1:-13058114 | None:intergenic |
| CAATTTCCACTAACCAAAGC+AGG | 0.561106 | 1_1:-13062081 | None:intergenic |
| ACTATGGTTGATCCAAAGAA+AGG | 0.565384 | 1_1:+13061949 | Msa0008980:CDS |
| AACTCATGTTCCTCTCCTTG+TGG | 0.565628 | 1_1:+13062188 | Msa0008980:CDS |
| TTTGGTTGGATTTGTTGTAG+GGG | 0.576606 | 1_1:+13061996 | Msa0008980:CDS |
| GCAAGCCCACCACCAATGAG+AGG | 0.582625 | 1_1:-13062132 | None:intergenic |
| GCCGCCAACAAGGAGGCCCA+AGG | 0.586419 | 1_1:-13058712 | None:intergenic |
| CTTTCTTCATCCACAAGGAG+AGG | 0.595545 | 1_1:-13062198 | None:intergenic |
| GGCGGGATTCAAATGGCCAC+CGG | 0.596177 | 1_1:-13058685 | None:intergenic |
| CAATCCAATATAAGATAGAA+CGG | 0.608884 | 1_1:-13058749 | None:intergenic |
| TAGAACGGACGACGGTGATG+TGG | 0.614235 | 1_1:-13058734 | None:intergenic |
| AGTGGAGTAGGGTGTACTCA+AGG | 0.614383 | 1_1:+13061874 | Msa0008980:CDS |
| AGTAGCTTTCTTCATCCACA+AGG | 0.615821 | 1_1:-13062203 | None:intergenic |
| TCCGCCGGTCACGTTTCCGG+TGG | 0.622015 | 1_1:+13058669 | Msa0008980:CDS |
| TATGGCACAAACTCTTCTAG+TGG | 0.624242 | 1_1:+13058635 | Msa0008980:CDS |
| ATACACTTAAAAGTGGAGTA+GGG | 0.631270 | 1_1:+13061863 | Msa0008980:CDS |
| ATGGTTGATCCAAAGAAAGG+AGG | 0.657733 | 1_1:+13061952 | Msa0008980:CDS |
| GCCACCGGAAACGTGACCGG+CGG | 0.669384 | 1_1:-13058670 | None:intergenic |
| GTCTTTAGGAACAACCCAAG+AGG | 0.681647 | 1_1:+13058043 | Msa0008980:CDS |
| GTGGCCGTAATGATATCCGC+CGG | 0.687540 | 1_1:+13058654 | Msa0008980:CDS |
| AAGGAGGCCCAAGGTCACGG+CGG | 0.691357 | 1_1:-13058703 | None:intergenic |
| TGATGTGGCCGCCAACAAGG+AGG | 0.709158 | 1_1:-13058719 | None:intergenic |
| CACTTACTAATCCACCAGTG+AGG | 0.739020 | 1_1:-13058815 | None:intergenic |
| ATATAAGATAGAACGGACGA+CGG | 0.768400 | 1_1:-13058742 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATAAAATTAAATTTTA+TGG | + | chr1_1:13060674-13060693 | Msa0008980:intron | 0.0% |
| !!! | ATATAATTTTATTAAAGGTT+TGG | + | chr1_1:13058263-13058282 | Msa0008980:intron | 10.0% |
| !!! | TTATCTAATGAAATAAATTT+TGG | - | chr1_1:13058576-13058595 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATGATGTTAATA+TGG | - | chr1_1:13059971-13059990 | None:intergenic | 10.0% |
| !!! | ATTCTGTTAATTTTTTTTAA+AGG | - | chr1_1:13060652-13060671 | None:intergenic | 10.0% |
| !!! | ACATAAATGGTTTTTTTTTA+AGG | - | chr1_1:13059079-13059098 | None:intergenic | 15.0% |
| !! | AAAAAAAACCATTTATGTAA+AGG | + | chr1_1:13059081-13059100 | Msa0008980:intron | 15.0% |
| !! | AATTAATTTCTTAAGTTTAG+AGG | + | chr1_1:13059173-13059192 | Msa0008980:intron | 15.0% |
| !!! | TCTTCACTTAATTTATTTTA+AGG | + | chr1_1:13059253-13059272 | Msa0008980:intron | 15.0% |
| !!! | CTTCACTTAATTTATTTTAA+GGG | + | chr1_1:13059254-13059273 | Msa0008980:intron | 15.0% |
| !! | TTATAAGCAATATTTACATA+AGG | - | chr1_1:13059296-13059315 | None:intergenic | 15.0% |
| !! | GAAAATATTGTTTGATATTA+TGG | + | chr1_1:13060532-13060551 | Msa0008980:intron | 15.0% |
| !!! | TAACCAAATTAAATTTTTAG+AGG | + | chr1_1:13060798-13060817 | Msa0008980:intron | 15.0% |
| !! | TTTCAAATTACTATATGTGT+CGG | + | chr1_1:13058407-13058426 | Msa0008980:intron | 20.0% |
| !!! | ATTTTTAACTTCTTGACTTA+GGG | - | chr1_1:13059123-13059142 | None:intergenic | 20.0% |
| !!! | TATTTTTAACTTCTTGACTT+AGG | - | chr1_1:13059124-13059143 | None:intergenic | 20.0% |
| !! | TAAATTAAGTGAAGAATTCA+AGG | - | chr1_1:13059248-13059267 | None:intergenic | 20.0% |
| !! | AATAGAATATTCGTAACATT+GGG | - | chr1_1:13059562-13059581 | None:intergenic | 20.0% |
| !!! | TATCAAACAATATTTTCGTA+AGG | - | chr1_1:13060529-13060548 | None:intergenic | 20.0% |
| !!! | AGACCTCTAAAAATTTAATT+TGG | - | chr1_1:13060804-13060823 | None:intergenic | 20.0% |
| !!! | TTTTGAAATATGTAGAATGT+GGG | + | chr1_1:13061285-13061304 | Msa0008980:intron | 20.0% |
| !! | TCTTTATCAATTGTGATAAA+TGG | - | chr1_1:13061710-13061729 | None:intergenic | 20.0% |
| !! | AAATAATGATCAAGATATTC+TGG | + | chr1_1:13061730-13061749 | Msa0008980:intron | 20.0% |
| ! | TACTAATAACCTATGAAGTA+CGG | + | chr1_1:13058304-13058323 | Msa0008980:intron | 25.0% |
| ! | GTTAATTTAACGGTAAAAGT+TGG | - | chr1_1:13058530-13058549 | None:intergenic | 25.0% |
| ! | AAGTCTCTGAGTTAATTTAA+CGG | - | chr1_1:13058540-13058559 | None:intergenic | 25.0% |
| !!! | TTTAGTGGGATTATTTTTTG+TGG | + | chr1_1:13058611-13058630 | Msa0008980:CDS | 25.0% |
| ! | CAATCCAATATAAGATAGAA+CGG | - | chr1_1:13058752-13058771 | None:intergenic | 25.0% |
| ! | AACATGATCCTTTACATAAA+TGG | - | chr1_1:13059092-13059111 | None:intergenic | 25.0% |
| ! | AGAATTAAGTGATGAATTCT+AGG | + | chr1_1:13059143-13059162 | Msa0008980:intron | 25.0% |
| ! | GAATAGAATATTCGTAACAT+TGG | - | chr1_1:13059563-13059582 | None:intergenic | 25.0% |
| ! | GGTTGAGTTTATTTGTAATT+AGG | - | chr1_1:13059824-13059843 | None:intergenic | 25.0% |
| !!! | TATCTCAATGACTTTTAGTT+TGG | - | chr1_1:13060022-13060041 | None:intergenic | 25.0% |
| ! | CGGTTATTAAAATATGTTAG+TGG | - | chr1_1:13060130-13060149 | None:intergenic | 25.0% |
| !!! | ATATTTTAATAACCGTGTCA+AGG | + | chr1_1:13060135-13060154 | Msa0008980:intron | 25.0% |
| !!! | TATTTTAATAACCGTGTCAA+GGG | + | chr1_1:13060136-13060155 | Msa0008980:intron | 25.0% |
| ! | ACAAATTATACCAAACTCAA+CGG | + | chr1_1:13060169-13060188 | Msa0008980:intron | 25.0% |
| ! | TTATTTGCATTATGTGGAAA+AGG | - | chr1_1:13060264-13060283 | None:intergenic | 25.0% |
| ! | TTCCACATAATGCAAATAAT+AGG | + | chr1_1:13060265-13060284 | Msa0008980:intron | 25.0% |
| ! | ATAATGCAAATAATAGGTGT+TGG | + | chr1_1:13060271-13060290 | Msa0008980:intron | 25.0% |
| !!! | TTATTGAGGAGATTATTTTG+AGG | - | chr1_1:13060576-13060595 | None:intergenic | 25.0% |
| ! | GCTTAAAGCAAAAAAGTTAA+TGG | + | chr1_1:13060626-13060645 | Msa0008980:intron | 25.0% |
| !! | TTGGTCATGAATCTAAATTT+TGG | - | chr1_1:13060703-13060722 | None:intergenic | 25.0% |
| !! | TTGCAACAATATCACATTTT+TGG | - | chr1_1:13060983-13061002 | None:intergenic | 25.0% |
| !! | TTTTTGTCTTGTGTTATCAA+AGG | - | chr1_1:13061149-13061168 | None:intergenic | 25.0% |
| !!! | GTTTTGAAATATGTAGAATG+TGG | + | chr1_1:13061284-13061303 | Msa0008980:intron | 25.0% |
| !!! | TTTTTGTTTTTTGCATTGTC+TGG | - | chr1_1:13061628-13061647 | None:intergenic | 25.0% |
| !! | CAATTTGTGTCTTTTATTGT+TGG | + | chr1_1:13061778-13061797 | Msa0008980:intron | 25.0% |
| TGAGATGAAGTTAATAGTAG+AGG | - | chr1_1:13058202-13058221 | None:intergenic | 30.0% | |
| ATGTTAGAAAGCTATTAGCT+AGG | - | chr1_1:13058476-13058495 | None:intergenic | 30.0% | |
| TTAGATAAGCTAAGTGAAGA+TGG | + | chr1_1:13058588-13058607 | Msa0008980:intron | 30.0% | |
| TACATAAGGAAATGCTAACA+AGG | - | chr1_1:13059282-13059301 | None:intergenic | 30.0% | |
| !!! | TGAGATGGAAGTTTTATTGA+GGG | - | chr1_1:13059433-13059452 | None:intergenic | 30.0% |
| !!! | TTGAGATGGAAGTTTTATTG+AGG | - | chr1_1:13059434-13059453 | None:intergenic | 30.0% |
| ATGGTAATAAGCATCATGAA+AGG | - | chr1_1:13059520-13059539 | None:intergenic | 30.0% | |
| TATTGTAGGGAATTTAAAGG+AGG | - | chr1_1:13059635-13059654 | None:intergenic | 30.0% | |
| GACTATTGTAGGGAATTTAA+AGG | - | chr1_1:13059638-13059657 | None:intergenic | 30.0% | |
| TTTATGCTTGGACTATTGTA+GGG | - | chr1_1:13059648-13059667 | None:intergenic | 30.0% | |
| ATACTTGGTATCTTTATGCT+TGG | - | chr1_1:13059660-13059679 | None:intergenic | 30.0% | |
| TCAGATCAAAGGTAATTGAA+AGG | - | chr1_1:13059692-13059711 | None:intergenic | 30.0% | |
| TCTCTTATTCATCAGATCAA+AGG | - | chr1_1:13059703-13059722 | None:intergenic | 30.0% | |
| AACCATATTATGTCATCCAA+TGG | - | chr1_1:13059778-13059797 | None:intergenic | 30.0% | |
| AGGAAGTGATATTATACCAT+GGG | - | chr1_1:13059804-13059823 | None:intergenic | 30.0% | |
| TAGGAAGTGATATTATACCA+TGG | - | chr1_1:13059805-13059824 | None:intergenic | 30.0% | |
| AAACTCAACCCGTAAATAAA+TGG | + | chr1_1:13059834-13059853 | Msa0008980:intron | 30.0% | |
| TTTCAACTTGGTAGATACAT+CGG | - | chr1_1:13059887-13059906 | None:intergenic | 30.0% | |
| TTTCTCGAATTCTTTCAACT+TGG | - | chr1_1:13059899-13059918 | None:intergenic | 30.0% | |
| !!! | ATGACTTTTAGTTTGGTGTT+GGG | - | chr1_1:13060015-13060034 | None:intergenic | 30.0% |
| !!! | AATGACTTTTAGTTTGGTGT+TGG | - | chr1_1:13060016-13060035 | None:intergenic | 30.0% |
| GATATTATGCCACATCTTTA+CGG | + | chr1_1:13060038-13060057 | Msa0008980:intron | 30.0% | |
| GAAATAAATCCGTAAAGATG+TGG | - | chr1_1:13060050-13060069 | None:intergenic | 30.0% | |
| GATTTATTTCATAGCAACCT+TGG | + | chr1_1:13060060-13060079 | Msa0008980:intron | 30.0% | |
| CAAATTATACCAAACTCAAC+GGG | + | chr1_1:13060170-13060189 | Msa0008980:intron | 30.0% | |
| ! | TTTTATGTGCTATCACTCTA+GGG | - | chr1_1:13060221-13060240 | None:intergenic | 30.0% |
| ! | ATTTTATGTGCTATCACTCT+AGG | - | chr1_1:13060222-13060241 | None:intergenic | 30.0% |
| CACCTATTATTTGCATTATG+TGG | - | chr1_1:13060270-13060289 | None:intergenic | 30.0% | |
| TTATTAAATTGTTCCCCCAA+AGG | - | chr1_1:13060326-13060345 | None:intergenic | 30.0% | |
| AATGTCAACTTCAATCACAA+GGG | + | chr1_1:13060356-13060375 | Msa0008980:intron | 30.0% | |
| ATATAACAAAGATACGATGG+AGG | - | chr1_1:13060448-13060467 | None:intergenic | 30.0% | |
| ! | TCCATCGTATCTTTGTTATA+TGG | + | chr1_1:13060447-13060466 | Msa0008980:intron | 30.0% |
| ! | CCATCGTATCTTTGTTATAT+GGG | + | chr1_1:13060448-13060467 | Msa0008980:intron | 30.0% |
| ! | CATCGTATCTTTGTTATATG+GGG | + | chr1_1:13060449-13060468 | Msa0008980:intron | 30.0% |
| TGAGGATAAAGACAAAAGAA+GGG | - | chr1_1:13060558-13060577 | None:intergenic | 30.0% | |
| TTGAGGATAAAGACAAAAGA+AGG | - | chr1_1:13060559-13060578 | None:intergenic | 30.0% | |
| AGCTTAACTGATTACCAAAA+AGG | - | chr1_1:13060738-13060757 | None:intergenic | 30.0% | |
| !!! | ATATCACATTTTTGGTTGCT+TGG | - | chr1_1:13060975-13060994 | None:intergenic | 30.0% |
| AACGAATCTCCTATATAAAC+CGG | + | chr1_1:13061088-13061107 | Msa0008980:intron | 30.0% | |
| TCATGATGAACATAGATTCT+TGG | + | chr1_1:13061185-13061204 | Msa0008980:intron | 30.0% | |
| !! | ATACTTTTTGTGTGAATGAG+GGG | - | chr1_1:13061246-13061265 | None:intergenic | 30.0% |
| !! | GATACTTTTTGTGTGAATGA+GGG | - | chr1_1:13061247-13061266 | None:intergenic | 30.0% |
| ! | TTTGTGTTACTAATGAGTCA+GGG | - | chr1_1:13061321-13061340 | None:intergenic | 30.0% |
| GTTTGAAAAGTCTATGAAGA+TGG | - | chr1_1:13061419-13061438 | None:intergenic | 30.0% | |
| ! | GACTTATTGGAGTTTGTTTA+TGG | - | chr1_1:13061443-13061462 | None:intergenic | 30.0% |
| ATACACTTAAAAGTGGAGTA+GGG | + | chr1_1:13061863-13061882 | Msa0008980:CDS | 30.0% | |
| CAACAAATCCAACCAAAATT+GGG | - | chr1_1:13061993-13062012 | None:intergenic | 30.0% | |
| ACAACAAATCCAACCAAAAT+TGG | - | chr1_1:13061994-13062013 | None:intergenic | 30.0% | |
| !!! | ATTTTGGTTGGATTTGTTGT+AGG | + | chr1_1:13061994-13062013 | Msa0008980:CDS | 30.0% |
| !!! | TTTTGGTTGGATTTGTTGTA+GGG | + | chr1_1:13061995-13062014 | Msa0008980:CDS | 30.0% |
| ! | GGTTGTTCCTAAAGACATTT+TGG | - | chr1_1:13058039-13058058 | None:intergenic | 35.0% |
| ATTAGAGCTTGGATGCAATT+AGG | - | chr1_1:13058077-13058096 | None:intergenic | 35.0% | |
| CGAATTCAACAATTAGAGCT+TGG | - | chr1_1:13058088-13058107 | None:intergenic | 35.0% | |
| TATGAAGTACGGATACTTCT+CGG | + | chr1_1:13058315-13058334 | Msa0008980:intron | 35.0% | |
| AGTAATCATAGATGTCGTGT+CGG | - | chr1_1:13058371-13058390 | None:intergenic | 35.0% | |
| CTAAGTGAAGATGGTTTAGT+GGG | + | chr1_1:13058597-13058616 | Msa0008980:CDS | 35.0% | |
| !!! | GGGATTATTTTTTGTGGCTA+TGG | + | chr1_1:13058617-13058636 | Msa0008980:CDS | 35.0% |
| ATATAAGATAGAACGGACGA+CGG | - | chr1_1:13058745-13058764 | None:intergenic | 35.0% | |
| TCGTCCGTTCTATCTTATAT+TGG | + | chr1_1:13058745-13058764 | Msa0008980:CDS | 35.0% | |
| TATCTTCTTCATTACCTCAC+TGG | + | chr1_1:13058801-13058820 | Msa0008980:CDS | 35.0% | |
| CAAAGAAAACTACCCAAGAA+TGG | + | chr1_1:13059322-13059341 | Msa0008980:intron | 35.0% | |
| !!! | GAGATGGAAGTTTTATTGAG+GGG | - | chr1_1:13059432-13059451 | None:intergenic | 35.0% |
| ! | GTTCCTTTCAGACATTTTTG+AGG | - | chr1_1:13059495-13059514 | None:intergenic | 35.0% |
| ATTTGTTTGCTTTCGTGTCA+TGG | - | chr1_1:13059539-13059558 | None:intergenic | 35.0% | |
| ATTCTATTCATGCTCAATCC+TGG | + | chr1_1:13059574-13059593 | Msa0008980:intron | 35.0% | |
| CTAAAGCATATGACATCGTT+CGG | - | chr1_1:13059609-13059628 | None:intergenic | 35.0% | |
| CTTTATGCTTGGACTATTGT+AGG | - | chr1_1:13059649-13059668 | None:intergenic | 35.0% | |
| GAAAGGTTCTTCTTCATACT+TGG | - | chr1_1:13059675-13059694 | None:intergenic | 35.0% | |
| GCAAATAAGGCAACTCTATT+GGG | - | chr1_1:13059752-13059771 | None:intergenic | 35.0% | |
| TGCAAATAAGGCAACTCTAT+TGG | - | chr1_1:13059753-13059772 | None:intergenic | 35.0% | |
| CTCCATTGGATGACATAATA+TGG | + | chr1_1:13059773-13059792 | Msa0008980:intron | 35.0% | |
| ACATAATATGGTTATCCCCA+TGG | + | chr1_1:13059785-13059804 | Msa0008980:intron | 35.0% | |
| GGAAGTGATATTATACCATG+GGG | - | chr1_1:13059803-13059822 | None:intergenic | 35.0% | |
| TCAACCCGTAAATAAATGGA+TGG | + | chr1_1:13059838-13059857 | Msa0008980:intron | 35.0% | |
| CAACCCGTAAATAAATGGAT+GGG | + | chr1_1:13059839-13059858 | Msa0008980:intron | 35.0% | |
| ATGCCCATCCATTTATTTAC+GGG | - | chr1_1:13059845-13059864 | None:intergenic | 35.0% | |
| GATGCCCATCCATTTATTTA+CGG | - | chr1_1:13059846-13059865 | None:intergenic | 35.0% | |
| !!! | TGACTTTTAGTTTGGTGTTG+GGG | - | chr1_1:13060014-13060033 | None:intergenic | 35.0% |
| TTATTGCAGTAGGTACTAGT+TGG | - | chr1_1:13060099-13060118 | None:intergenic | 35.0% | |
| AACTAGTACCTACTGCAATA+AGG | + | chr1_1:13060098-13060117 | Msa0008980:intron | 35.0% | |
| ! | TCTAGGGTTAACTTATGGAT+AGG | - | chr1_1:13060205-13060224 | None:intergenic | 35.0% |
| !! | ATCACTCTAGGGTTAACTTA+TGG | - | chr1_1:13060210-13060229 | None:intergenic | 35.0% |
| ! | ATGTGGTAGAAATGGTTTGT+GGG | - | chr1_1:13060298-13060317 | None:intergenic | 35.0% |
| TTGAAGTTGACATTGTTCTC+AGG | - | chr1_1:13060350-13060369 | None:intergenic | 35.0% | |
| CAATGTCAACTTCAATCACA+AGG | + | chr1_1:13060355-13060374 | Msa0008980:intron | 35.0% | |
| ATGTCAACTTCAATCACAAG+GGG | + | chr1_1:13060357-13060376 | Msa0008980:intron | 35.0% | |
| AAGGGGAGCTACAAAAAATA+TGG | + | chr1_1:13060374-13060393 | Msa0008980:intron | 35.0% | |
| GCTACAAAAAATATGGTGGT+TGG | + | chr1_1:13060381-13060400 | Msa0008980:intron | 35.0% | |
| ! | AAAAAATATGGTGGTTGGCT+TGG | + | chr1_1:13060386-13060405 | Msa0008980:intron | 35.0% |
| CCCATATAACAAAGATACGA+TGG | - | chr1_1:13060451-13060470 | None:intergenic | 35.0% | |
| ! | TATTTTCGTAAGGTTGCAGA+TGG | - | chr1_1:13060519-13060538 | None:intergenic | 35.0% |
| CTTTAAGCCTCTTAATCTGT+TGG | - | chr1_1:13060614-13060633 | None:intergenic | 35.0% | |
| TTCATGACCAAGAGTAATTG+AGG | + | chr1_1:13060712-13060731 | Msa0008980:intron | 35.0% | |
| AAAAAGGCCTCAATTACTCT+TGG | - | chr1_1:13060722-13060741 | None:intergenic | 35.0% | |
| ! | AAGAGTAATTGAGGCCTTTT+TGG | + | chr1_1:13060721-13060740 | Msa0008980:intron | 35.0% |
| !!! | TTTTTTCACCCGAAATCTTG+AGG | + | chr1_1:13060825-13060844 | Msa0008980:intron | 35.0% |
| TTCGGAGATTATGTGCAATA+TGG | - | chr1_1:13060901-13060920 | None:intergenic | 35.0% | |
| ! | AAGTTGGTTGAATGTGTGTT+CGG | - | chr1_1:13060919-13060938 | None:intergenic | 35.0% |
| CTAAATATATGGAGAGTAGC+GGG | - | chr1_1:13060952-13060971 | None:intergenic | 35.0% | |
| GCTAAATATATGGAGAGTAG+CGG | - | chr1_1:13060953-13060972 | None:intergenic | 35.0% | |
| TGGTTGCTTGGCTAAATATA+TGG | - | chr1_1:13060963-13060982 | None:intergenic | 35.0% | |
| AACACAAGACAAAAACCATG+AGG | + | chr1_1:13061154-13061173 | Msa0008980:intron | 35.0% | |
| ! | ATCATGAAGAGTATACCTCA+TGG | - | chr1_1:13061172-13061191 | None:intergenic | 35.0% |
| TGATGAACATAGATTCTTGG+AGG | + | chr1_1:13061188-13061207 | Msa0008980:intron | 35.0% | |
| !! | CGATACTTTTTGTGTGAATG+AGG | - | chr1_1:13061248-13061267 | None:intergenic | 35.0% |
| !! | CATTCACACAAAAAGTATCG+AGG | + | chr1_1:13061248-13061267 | Msa0008980:intron | 35.0% |
| ! | TTGTGTTACTAATGAGTCAG+GGG | - | chr1_1:13061320-13061339 | None:intergenic | 35.0% |
| ! | GTTTGTGTTACTAATGAGTC+AGG | - | chr1_1:13061322-13061341 | None:intergenic | 35.0% |
| ACTCATTAGTAACACAAACC+AGG | + | chr1_1:13061323-13061342 | Msa0008980:intron | 35.0% | |
| GAGAAGAACTCAAGACTTAT+TGG | - | chr1_1:13061456-13061475 | None:intergenic | 35.0% | |
| TATAGTGCTTCATCTTAAGG+CGG | - | chr1_1:13061515-13061534 | None:intergenic | 35.0% | |
| TCGTATAGTGCTTCATCTTA+AGG | - | chr1_1:13061518-13061537 | None:intergenic | 35.0% | |
| !! | CCACTTTTAAGTGTATGAAC+TGG | - | chr1_1:13061859-13061878 | None:intergenic | 35.0% |
| CCAGTTCATACACTTAAAAG+TGG | + | chr1_1:13061856-13061875 | Msa0008980:CDS | 35.0% | |
| CATACACTTAAAAGTGGAGT+AGG | + | chr1_1:13061862-13061881 | Msa0008980:CDS | 35.0% | |
| ACTATGGTTGATCCAAAGAA+AGG | + | chr1_1:13061949-13061968 | Msa0008980:CDS | 35.0% | |
| !! | TTTGGTTGGATTTGTTGTAG+GGG | + | chr1_1:13061996-13062015 | Msa0008980:CDS | 35.0% |
| AAAAGATCTTGCTGGATTCA+TGG | - | chr1_1:13062058-13062077 | None:intergenic | 35.0% | |
| ! | ATGAATCCAGCAAGATCTTT+TGG | + | chr1_1:13062057-13062076 | Msa0008980:CDS | 35.0% |
| !! | ATTAGGTTGAGTAGCCTCTT+GGG | - | chr1_1:13058060-13058079 | None:intergenic | 40.0% |
| !! | AATTAGGTTGAGTAGCCTCT+TGG | - | chr1_1:13058061-13058080 | None:intergenic | 40.0% |
| ACCTTTCTCTTTGTCTTTGC+TGG | + | chr1_1:13058113-13058132 | Msa0008980:CDS | 40.0% | |
| ACCAGCAAAGACAAAGAGAA+AGG | - | chr1_1:13058117-13058136 | None:intergenic | 40.0% | |
| !! | TGCTGGTGTTGGTTCAAAAA+TGG | + | chr1_1:13058130-13058149 | Msa0008980:CDS | 40.0% |
| !! | GAGAAGTATCCGTACTTCAT+AGG | - | chr1_1:13058316-13058335 | None:intergenic | 40.0% |
| TACGGATACTTCTCGGATTA+GGG | + | chr1_1:13058322-13058341 | Msa0008980:intron | 40.0% | |
| TATGGATACTAGACACGACA+CGG | - | chr1_1:13058438-13058457 | None:intergenic | 40.0% | |
| AAGCTATTAGCTAGGAAGCA+CGG | - | chr1_1:13058468-13058487 | None:intergenic | 40.0% | |
| GCTAAGTGAAGATGGTTTAG+TGG | + | chr1_1:13058596-13058615 | Msa0008980:CDS | 40.0% | |
| TATGGCACAAACTCTTCTAG+TGG | + | chr1_1:13058635-13058654 | Msa0008980:CDS | 40.0% | |
| GATCAACATATAGCATCTGC+AGG | + | chr1_1:13058771-13058790 | Msa0008980:CDS | 40.0% | |
| GAGCTTCATCTTCCATTCTT+GGG | - | chr1_1:13059337-13059356 | None:intergenic | 40.0% | |
| TGAGCTTCATCTTCCATTCT+TGG | - | chr1_1:13059338-13059357 | None:intergenic | 40.0% | |
| !!! | GGAAGTTTTATTGAGGGGTT+GGG | - | chr1_1:13059427-13059446 | None:intergenic | 40.0% |
| !!! | TGGAAGTTTTATTGAGGGGT+TGG | - | chr1_1:13059428-13059447 | None:intergenic | 40.0% |
| !!! | ATTTTTGAGGCGAACGTTAG+GGG | - | chr1_1:13059482-13059501 | None:intergenic | 40.0% |
| !!! | CATTTTTGAGGCGAACGTTA+GGG | - | chr1_1:13059483-13059502 | None:intergenic | 40.0% |
| !!! | ACATTTTTGAGGCGAACGTT+AGG | - | chr1_1:13059484-13059503 | None:intergenic | 40.0% |
| TCGCCTCAAAAATGTCTGAA+AGG | + | chr1_1:13059489-13059508 | Msa0008980:intron | 40.0% | |
| TGTAGGGAATTTAAAGGAGG+TGG | - | chr1_1:13059632-13059651 | None:intergenic | 40.0% | |
| !! | TTGCCTTATTTGCACTCCAT+TGG | + | chr1_1:13059759-13059778 | Msa0008980:intron | 40.0% |
| CATCCAATGGAGTGCAAATA+AGG | - | chr1_1:13059765-13059784 | None:intergenic | 40.0% | |
| AATAAGATGCCCGTTGAGTT+TGG | - | chr1_1:13060182-13060201 | None:intergenic | 40.0% | |
| ATGTGGAAAAGGTTTCGTTC+TGG | - | chr1_1:13060253-13060272 | None:intergenic | 40.0% | |
| CATGTGGTAGAAATGGTTTG+TGG | - | chr1_1:13060299-13060318 | None:intergenic | 40.0% | |
| AGGACATCATGTGGTAGAAA+TGG | - | chr1_1:13060306-13060325 | None:intergenic | 40.0% | |
| TTCTACCACATGATGTCCTT+TGG | + | chr1_1:13060307-13060326 | Msa0008980:intron | 40.0% | |
| TCTACCACATGATGTCCTTT+GGG | + | chr1_1:13060308-13060327 | Msa0008980:intron | 40.0% | |
| GGGAGCTACAAAAAATATGG+TGG | + | chr1_1:13060377-13060396 | Msa0008980:intron | 40.0% | |
| ! | CAAAGATACGATGGAGGTTT+TGG | - | chr1_1:13060442-13060461 | None:intergenic | 40.0% |
| !! | ACAATGACTGTGAAGGTGTT+GGG | - | chr1_1:13060489-13060508 | None:intergenic | 40.0% |
| ACACTTCACAATGACTGTGA+AGG | - | chr1_1:13060496-13060515 | None:intergenic | 40.0% | |
| AATCTCCTCAATAACTCACC+AGG | + | chr1_1:13060582-13060601 | Msa0008980:intron | 40.0% | |
| ATCTCCTCAATAACTCACCA+GGG | + | chr1_1:13060583-13060602 | Msa0008980:intron | 40.0% | |
| !! | GTTTTAGGCCTCAAGATTTC+GGG | - | chr1_1:13060836-13060855 | None:intergenic | 40.0% |
| !!! | GGTTTTAGGCCTCAAGATTT+CGG | - | chr1_1:13060837-13060856 | None:intergenic | 40.0% |
| TGTGCAATATGGTGTGAGTA+GGG | - | chr1_1:13060890-13060909 | None:intergenic | 40.0% | |
| ATGTGCAATATGGTGTGAGT+AGG | - | chr1_1:13060891-13060910 | None:intergenic | 40.0% | |
| GAACACACATTCAACCAACT+TGG | + | chr1_1:13060918-13060937 | Msa0008980:intron | 40.0% | |
| !!! | AGGTTTTAAAGCCTCGAACT+AGG | - | chr1_1:13061036-13061055 | None:intergenic | 40.0% |
| AAAACCTGTAATGTTCGACG+AGG | + | chr1_1:13061049-13061068 | Msa0008980:intron | 40.0% | |
| ! | CATGCTAAGCCGGTTTATAT+AGG | - | chr1_1:13061100-13061119 | None:intergenic | 40.0% |
| TTATCATGTGCATGCTAAGC+CGG | - | chr1_1:13061110-13061129 | None:intergenic | 40.0% | |
| CTTAGCATGCACATGATAAG+AGG | + | chr1_1:13061111-13061130 | Msa0008980:intron | 40.0% | |
| ! | TTTTGGATGCAAGACCGTTA+GGG | - | chr1_1:13061219-13061238 | None:intergenic | 40.0% |
| ! | GTATCGAGGTCTTTTCTAGA+TGG | + | chr1_1:13061262-13061281 | Msa0008980:intron | 40.0% |
| TAACACAAACCAGGTCATCA+AGG | + | chr1_1:13061332-13061351 | Msa0008980:intron | 40.0% | |
| TTGAGCAATGGATGTTTGGA+AGG | - | chr1_1:13061396-13061415 | None:intergenic | 40.0% | |
| ATGGTTGAGCAATGGATGTT+TGG | - | chr1_1:13061400-13061419 | None:intergenic | 40.0% | |
| CTATGAAGATGGTTGAGCAA+TGG | - | chr1_1:13061408-13061427 | None:intergenic | 40.0% | |
| AACATCTTTACTCCCTTCTG+TGG | + | chr1_1:13061540-13061559 | Msa0008980:intron | 40.0% | |
| GTGTACTCAAGGAGTAGTTT+GGG | + | chr1_1:13061885-13061904 | Msa0008980:CDS | 40.0% | |
| GTTCACTGTGTATGCAACTA+TGG | + | chr1_1:13061933-13061952 | Msa0008980:CDS | 40.0% | |
| ATGGTTGATCCAAAGAAAGG+AGG | + | chr1_1:13061952-13061971 | Msa0008980:CDS | 40.0% | |
| ! | AAGATCTTTTGGACCTGCTT+TGG | + | chr1_1:13062068-13062087 | Msa0008980:CDS | 40.0% |
| CAATTTCCACTAACCAAAGC+AGG | - | chr1_1:13062084-13062103 | None:intergenic | 40.0% | |
| CTGCTTTGGTTAGTGGAAAT+TGG | + | chr1_1:13062082-13062101 | Msa0008980:CDS | 40.0% | |
| TGGAAATTGGACTGACCAAT+GGG | + | chr1_1:13062095-13062114 | Msa0008980:CDS | 40.0% | |
| !!! | GACTGACCAATGGGTTTTTT+GGG | + | chr1_1:13062104-13062123 | Msa0008980:CDS | 40.0% |
| !!! | ACCAATGGGTTTTTTGGGTT+GGG | + | chr1_1:13062109-13062128 | Msa0008980:CDS | 40.0% |
| AGTAGCTTTCTTCATCCACA+AGG | - | chr1_1:13062206-13062225 | None:intergenic | 40.0% | |
| ! | GTCTTTAGGAACAACCCAAG+AGG | + | chr1_1:13058043-13058062 | Msa0008980:CDS | 45.0% |
| CTCTTTGTCTTTGCTGGTGT+TGG | + | chr1_1:13058119-13058138 | Msa0008980:CDS | 45.0% | |
| ! | GTTGGTTCAAAAATGGCTGC+TGG | + | chr1_1:13058137-13058156 | Msa0008980:CDS | 45.0% |
| GTACGGATACTTCTCGGATT+AGG | + | chr1_1:13058321-13058340 | Msa0008980:intron | 45.0% | |
| ! | ACGGATACTTCTCGGATTAG+GGG | + | chr1_1:13058323-13058342 | Msa0008980:intron | 45.0% |
| ! | AGGAAGCACGGACACAAATA+TGG | - | chr1_1:13058456-13058475 | None:intergenic | 45.0% |
| CTTCTTCATTACCTCACTGG+TGG | + | chr1_1:13058804-13058823 | Msa0008980:CDS | 45.0% | |
| CACTTACTAATCCACCAGTG+AGG | - | chr1_1:13058818-13058837 | None:intergenic | 45.0% | |
| GGAAGATGAAGCTCATTCTG+AGG | + | chr1_1:13059343-13059362 | Msa0008980:intron | 45.0% | |
| TAGGGGTGAAATTGCTTGGA+GGG | - | chr1_1:13059465-13059484 | None:intergenic | 45.0% | |
| TTAGGGGTGAAATTGCTTGG+AGG | - | chr1_1:13059466-13059485 | None:intergenic | 45.0% | |
| ACGTTAGGGGTGAAATTGCT+TGG | - | chr1_1:13059469-13059488 | None:intergenic | 45.0% | |
| GAGTGTAACGCAAGAGCAAA+AGG | + | chr1_1:13059721-13059740 | Msa0008980:intron | 45.0% | |
| TTGAGCTAGTGACATGGAGA+TGG | - | chr1_1:13059946-13059965 | None:intergenic | 45.0% | |
| ! | ATGGTGTTGAGCTAGTGACA+TGG | - | chr1_1:13059952-13059971 | None:intergenic | 45.0% |
| !! | TAGTTTGGTGTTGGGGTTTC+AGG | - | chr1_1:13060007-13060026 | None:intergenic | 45.0% |
| TTGCAGTAGGTACTAGTTGG+AGG | - | chr1_1:13060096-13060115 | None:intergenic | 45.0% | |
| ! | TAGCTTTTGCACCCTTGACA+CGG | - | chr1_1:13060150-13060169 | None:intergenic | 45.0% |
| CTACCACATGATGTCCTTTG+GGG | + | chr1_1:13060309-13060328 | Msa0008980:intron | 45.0% | |
| TACCACATGATGTCCTTTGG+GGG | + | chr1_1:13060310-13060329 | Msa0008980:intron | 45.0% | |
| !! | AAATATGGTGGTTGGCTTGG+AGG | + | chr1_1:13060389-13060408 | Msa0008980:intron | 45.0% |
| !! | AATATGGTGGTTGGCTTGGA+GGG | + | chr1_1:13060390-13060409 | Msa0008980:intron | 45.0% |
| !! | AGATACGATGGAGGTTTTGG+AGG | - | chr1_1:13060439-13060458 | None:intergenic | 45.0% |
| !! | CAATGACTGTGAAGGTGTTG+GGG | - | chr1_1:13060488-13060507 | None:intergenic | 45.0% |
| ! | CACAATGACTGTGAAGGTGT+TGG | - | chr1_1:13060490-13060509 | None:intergenic | 45.0% |
| ! | AATATATGGAGAGTAGCGGG+TGG | - | chr1_1:13060949-13060968 | None:intergenic | 45.0% |
| CTCGAACTAGGCAGAATTAC+AGG | - | chr1_1:13061024-13061043 | None:intergenic | 45.0% | |
| CTGTAATTCTGCCTAGTTCG+AGG | + | chr1_1:13061022-13061041 | Msa0008980:intron | 45.0% | |
| AATGTTCGACGAGGAAGCAA+TGG | + | chr1_1:13061058-13061077 | Msa0008980:intron | 45.0% | |
| TCTTGGAGGACATTCCCTAA+CGG | + | chr1_1:13061202-13061221 | Msa0008980:intron | 45.0% | |
| !! | GTTTTGGATGCAAGACCGTT+AGG | - | chr1_1:13061220-13061239 | None:intergenic | 45.0% |
| ! | TTTTTGTGTGAATGAGGGGC+TGG | - | chr1_1:13061242-13061261 | None:intergenic | 45.0% |
| ! | AGATTTTCAGTGTCCGTTCC+GGG | - | chr1_1:13061586-13061605 | None:intergenic | 45.0% |
| ! | GAGATTTTCAGTGTCCGTTC+CGG | - | chr1_1:13061587-13061606 | None:intergenic | 45.0% |
| GGTGTACTCAAGGAGTAGTT+TGG | + | chr1_1:13061884-13061903 | Msa0008980:CDS | 45.0% | |
| CCAGAAAGTCCTCCTTTCTT+TGG | - | chr1_1:13061964-13061983 | None:intergenic | 45.0% | |
| CCAAAGAAAGGAGGACTTTC+TGG | + | chr1_1:13061961-13061980 | Msa0008980:CDS | 45.0% | |
| AAAGGAGGACTTTCTGGACT+TGG | + | chr1_1:13061967-13061986 | Msa0008980:CDS | 45.0% | |
| ! | TTCTGGACTTGGCCCAATTT+TGG | + | chr1_1:13061978-13061997 | Msa0008980:CDS | 45.0% |
| TGTTGTAGGGGCTAACATCT+TGG | + | chr1_1:13062008-13062027 | Msa0008980:CDS | 45.0% | |
| TTTGGACCTGCTTTGGTTAG+TGG | + | chr1_1:13062075-13062094 | Msa0008980:CDS | 45.0% | |
| GTGGAAATTGGACTGACCAA+TGG | + | chr1_1:13062094-13062113 | Msa0008980:CDS | 45.0% | |
| !!! | GGACTGACCAATGGGTTTTT+TGG | + | chr1_1:13062103-13062122 | Msa0008980:CDS | 45.0% |
| !!! | GACCAATGGGTTTTTTGGGT+TGG | + | chr1_1:13062108-13062127 | Msa0008980:CDS | 45.0% |
| AACTCATGTTCCTCTCCTTG+TGG | + | chr1_1:13062188-13062207 | Msa0008980:CDS | 45.0% | |
| CTTTCTTCATCCACAAGGAG+AGG | - | chr1_1:13062201-13062220 | None:intergenic | 45.0% | |
| !! | AATAAAATTATATTGAAAAT+TGG | - | chr1_1:13058256-13058275 | None:intergenic | 5.0% |
| !!! | TTTCAATATAATTTTATTAA+AGG | + | chr1_1:13058258-13058277 | Msa0008980:intron | 5.0% |
| !! | TTCTCGGATTAGGGGTGTTC+TGG | + | chr1_1:13058331-13058350 | Msa0008980:intron | 50.0% |
| ! | CATAGATGTCGTGTCGGTGT+TGG | - | chr1_1:13058365-13058384 | None:intergenic | 50.0% |
| GTGACCGGCGGATATCATTA+CGG | - | chr1_1:13058661-13058680 | None:intergenic | 50.0% | |
| GGAGGGGTTGTTAGTTGAGA+TGG | - | chr1_1:13059448-13059467 | None:intergenic | 50.0% | |
| AGGGGTGAAATTGCTTGGAG+GGG | - | chr1_1:13059464-13059483 | None:intergenic | 50.0% | |
| !! | TTTGGTGTTGGGGTTTCAGG+TGG | - | chr1_1:13060004-13060023 | None:intergenic | 50.0% |
| ! | GGAATGCGCCTTATTGCAGT+AGG | - | chr1_1:13060109-13060128 | None:intergenic | 50.0% |
| TTCCCCCAAAGGACATCATG+TGG | - | chr1_1:13060315-13060334 | None:intergenic | 50.0% | |
| TTGGAGGGAGGTGACATGTA+CGG | + | chr1_1:13060405-13060424 | Msa0008980:intron | 50.0% | |
| CCTCAATAACTCACCAGGGT+CGG | + | chr1_1:13060587-13060606 | Msa0008980:intron | 50.0% | |
| TTAATCTGTTGGACCGACCC+TGG | - | chr1_1:13060603-13060622 | None:intergenic | 50.0% | |
| GGTCGGTCCAACAGATTAAG+AGG | + | chr1_1:13060604-13060623 | Msa0008980:intron | 50.0% | |
| TGAGGCCTAAAACCCTTGCT+TGG | + | chr1_1:13060843-13060862 | Msa0008980:intron | 50.0% | |
| GAGGCCTAAAACCCTTGCTT+GGG | + | chr1_1:13060844-13060863 | Msa0008980:intron | 50.0% | |
| ! | GCAACCCAAGCAAGGGTTTT+AGG | - | chr1_1:13060851-13060870 | None:intergenic | 50.0% |
| ! | AAACCCTTGCTTGGGTTGCT+TGG | + | chr1_1:13060852-13060871 | Msa0008980:intron | 50.0% |
| CAATATGGTGTGAGTAGGGC+CGG | - | chr1_1:13060886-13060905 | None:intergenic | 50.0% | |
| GCTTCCTCGTCGAACATTAC+AGG | - | chr1_1:13061056-13061075 | None:intergenic | 50.0% | |
| !!! | TGTGAATGAGGGGCTGGTTT+TGG | - | chr1_1:13061236-13061255 | None:intergenic | 50.0% |
| CACAAACCAGGTCATCAAGG+TGG | + | chr1_1:13061335-13061354 | Msa0008980:intron | 50.0% | |
| ! | ATGTCACCACCTTGATGACC+TGG | - | chr1_1:13061344-13061363 | None:intergenic | 50.0% |
| GTGGTGACATGCACAACTCA+TGG | + | chr1_1:13061354-13061373 | Msa0008980:intron | 50.0% | |
| TACTCCCTTCTGTGGCATCT+AGG | + | chr1_1:13061548-13061567 | Msa0008980:intron | 50.0% | |
| GTTGCCTAGATGCCACAGAA+GGG | - | chr1_1:13061555-13061574 | None:intergenic | 50.0% | |
| TGTTGCCTAGATGCCACAGA+AGG | - | chr1_1:13061556-13061575 | None:intergenic | 50.0% | |
| ! | ATTTTCAGTGTCCGTTCCGG+GGG | - | chr1_1:13061584-13061603 | None:intergenic | 50.0% |
| ! | GATTTTCAGTGTCCGTTCCG+GGG | - | chr1_1:13061585-13061604 | None:intergenic | 50.0% |
| AGTGGAGTAGGGTGTACTCA+AGG | + | chr1_1:13061874-13061893 | Msa0008980:CDS | 50.0% | |
| !! | GGACTTGGCCCAATTTTGGT+TGG | + | chr1_1:13061982-13062001 | Msa0008980:CDS | 50.0% |
| GCAGGTCCAAAAGATCTTGC+TGG | - | chr1_1:13062066-13062085 | None:intergenic | 50.0% | |
| GCCCAACCCAAAAAACCCAT+TGG | - | chr1_1:13062113-13062132 | None:intergenic | 50.0% | |
| !!! | TTTTGGGTTGGGCCTCTCAT+TGG | + | chr1_1:13062120-13062139 | Msa0008980:CDS | 50.0% |
| !! | TGTCGTGTCGGTGTTGGTGT+CGG | - | chr1_1:13058359-13058378 | None:intergenic | 55.0% |
| GTGGCCGTAATGATATCCGC+CGG | + | chr1_1:13058654-13058673 | Msa0008980:CDS | 55.0% | |
| ATATCCGCCGGTCACGTTTC+CGG | + | chr1_1:13058666-13058685 | Msa0008980:CDS | 55.0% | |
| AGGTCACGGCGGGATTCAAA+TGG | - | chr1_1:13058695-13058714 | None:intergenic | 55.0% | |
| TTTGAATCCCGCCGTGACCT+TGG | + | chr1_1:13058695-13058714 | Msa0008980:CDS | 55.0% | |
| TTGAATCCCGCCGTGACCTT+GGG | + | chr1_1:13058696-13058715 | Msa0008980:CDS | 55.0% | |
| AACAAGGAGGCCCAAGGTCA+CGG | - | chr1_1:13058709-13058728 | None:intergenic | 55.0% | |
| TAGAACGGACGACGGTGATG+TGG | - | chr1_1:13058737-13058756 | None:intergenic | 55.0% | |
| ATCGTTCGGATGTTCGTGCC+AGG | - | chr1_1:13059595-13059614 | None:intergenic | 55.0% | |
| TACATCGGCACTAGTGTGCG+AGG | - | chr1_1:13059872-13059891 | None:intergenic | 55.0% | |
| !! | TTGGAGGCGTCTGGTATCCA+AGG | - | chr1_1:13060080-13060099 | None:intergenic | 55.0% |
| !! | AGGTACTAGTTGGAGGCGTC+TGG | - | chr1_1:13060089-13060108 | None:intergenic | 55.0% |
| TGGAGGGAGGTGACATGTAC+GGG | + | chr1_1:13060406-13060425 | Msa0008980:intron | 55.0% | |
| ! | GGTGTTGGGGTCATCTAGAG+TGG | - | chr1_1:13060475-13060494 | None:intergenic | 55.0% |
| CCGACCCTGGTGAGTTATTG+AGG | - | chr1_1:13060590-13060609 | None:intergenic | 55.0% | |
| TCTAGGCAACAGTGAACCCC+CGG | + | chr1_1:13061565-13061584 | Msa0008980:intron | 55.0% | |
| GTAGGGGCTAACATCTTGGC+TGG | + | chr1_1:13062012-13062031 | Msa0008980:CDS | 55.0% | |
| ! | TTGGGCCTCTCATTGGTGGT+GGG | + | chr1_1:13062127-13062146 | Msa0008980:CDS | 55.0% |
| ATGGCCACCGGAAACGTGAC+CGG | - | chr1_1:13058676-13058695 | None:intergenic | 60.0% | |
| GGCGGGATTCAAATGGCCAC+CGG | - | chr1_1:13058688-13058707 | None:intergenic | 60.0% | |
| GTGACCTTGGGCCTCCTTGT+TGG | + | chr1_1:13058708-13058727 | Msa0008980:CDS | 60.0% | |
| ACCTTGGGCCTCCTTGTTGG+CGG | + | chr1_1:13058711-13058730 | Msa0008980:CDS | 60.0% | |
| TGATGTGGCCGCCAACAAGG+AGG | - | chr1_1:13058722-13058741 | None:intergenic | 60.0% | |
| !! | ATGGTGGTTGGCTTGGAGGG+AGG | + | chr1_1:13060393-13060412 | Msa0008980:intron | 60.0% |
| GGGCCAAGCAACCCAAGCAA+GGG | - | chr1_1:13060858-13060877 | None:intergenic | 60.0% | |
| AGGGCCAAGCAACCCAAGCA+AGG | - | chr1_1:13060859-13060878 | None:intergenic | 60.0% | |
| ! | GCTTGGGTTGCTTGGCCCTT+AGG | + | chr1_1:13060860-13060879 | Msa0008980:intron | 60.0% |
| TGTGAGTAGGGCCGGCCTAA+GGG | - | chr1_1:13060878-13060897 | None:intergenic | 60.0% | |
| ! | AGCGGGTGGTCTTGCCAAGT+TGG | - | chr1_1:13060935-13060954 | None:intergenic | 60.0% |
| GCAACAGTGAACCCCCGGAA+CGG | + | chr1_1:13061570-13061589 | Msa0008980:intron | 60.0% | |
| GGGGCTAACATCTTGGCTGG+CGG | + | chr1_1:13062015-13062034 | Msa0008980:CDS | 60.0% | |
| GGGCTAACATCTTGGCTGGC+GGG | + | chr1_1:13062016-13062035 | Msa0008980:CDS | 60.0% | |
| GGCTAACATCTTGGCTGGCG+GGG | + | chr1_1:13062017-13062036 | Msa0008980:CDS | 60.0% | |
| ! | TGGGTTGGGCCTCTCATTGG+TGG | + | chr1_1:13062123-13062142 | Msa0008980:CDS | 60.0% |
| GTTGGGCCTCTCATTGGTGG+TGG | + | chr1_1:13062126-13062145 | Msa0008980:CDS | 60.0% | |
| GCAAGCCCACCACCAATGAG+AGG | - | chr1_1:13062135-13062154 | None:intergenic | 60.0% | |
| !! | CTCATTGGTGGTGGGCTTGC+TGG | + | chr1_1:13062135-13062154 | Msa0008980:CDS | 60.0% |
| AAGGAGGCCCAAGGTCACGG+CGG | - | chr1_1:13058706-13058725 | None:intergenic | 65.0% | |
| CGGTGATGTGGCCGCCAACA+AGG | - | chr1_1:13058725-13058744 | None:intergenic | 65.0% | |
| GGGTTGCTTGGCCCTTAGGC+CGG | + | chr1_1:13060864-13060883 | Msa0008980:intron | 65.0% | |
| GTGTGAGTAGGGCCGGCCTA+AGG | - | chr1_1:13060879-13060898 | None:intergenic | 65.0% | |
| TCCGCCGGTCACGTTTCCGG+TGG | + | chr1_1:13058669-13058688 | Msa0008980:CDS | 70.0% | |
| GCCACCGGAAACGTGACCGG+CGG | - | chr1_1:13058673-13058692 | None:intergenic | 70.0% | |
| AGGAGGCCCAAGGTCACGGC+GGG | - | chr1_1:13058705-13058724 | None:intergenic | 70.0% | |
| GCCGCCAACAAGGAGGCCCA+AGG | - | chr1_1:13058715-13058734 | None:intergenic | 70.0% | |
| TTGGCTGGCGGGGCTTTCGC+AGG | + | chr1_1:13062027-13062046 | Msa0008980:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 13058032 | 13062227 | 13058032 | ID=Msa0008980;Name=Msa0008980 |
| chr1_1 | mRNA | 13058032 | 13062227 | 13058032 | ID=Msa0008980-mRNA-1;Parent=Msa0008980;Name=Msa0008980-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|1|1|3|0|247 |
| chr1_1 | exon | 13058032 | 13058158 | 13058032 | ID=Msa0008980-mRNA-1:exon:4916;Parent=Msa0008980-mRNA-1 |
| chr1_1 | exon | 13058592 | 13058830 | 13058592 | ID=Msa0008980-mRNA-1:exon:4917;Parent=Msa0008980-mRNA-1 |
| chr1_1 | exon | 13061850 | 13062227 | 13061850 | ID=Msa0008980-mRNA-1:exon:4918;Parent=Msa0008980-mRNA-1 |
| chr1_1 | CDS | 13058032 | 13058158 | 13058032 | ID=Msa0008980-mRNA-1:cds;Parent=Msa0008980-mRNA-1 |
| chr1_1 | CDS | 13058592 | 13058830 | 13058592 | ID=Msa0008980-mRNA-1:cds;Parent=Msa0008980-mRNA-1 |
| chr1_1 | CDS | 13061850 | 13062227 | 13061850 | ID=Msa0008980-mRNA-1:cds;Parent=Msa0008980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
