AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0717030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0717030 MtrunA17_Chr5g0404721 97.281 331 9 0 1 331 1 331 0.0 663
Msa0717030 MtrunA17_Chr8g0372601 83.228 316 53 0 15 330 15 330 0.0 558
Msa0717030 MtrunA17_Chr1g0155611 61.921 302 114 1 30 330 46 347 2.78e-131 378
Msa0717030 MtrunA17_Chr4g0013171 53.681 326 138 5 7 330 7 321 1.19e-113 332
Msa0717030 MtrunA17_Chr7g0258811 50.613 326 155 3 7 330 50 371 3.13e-113 333
Msa0717030 MtrunA17_Chr5g0438021 50.765 327 147 4 6 330 11 325 3.92e-113 331
Msa0717030 MtrunA17_Chr5g0400331 54.072 307 134 3 30 330 26 331 9.52e-113 330
Msa0717030 MtrunA17_Chr2g0320031 50.464 323 146 2 8 330 11 319 5.06e-112 328
Msa0717030 MtrunA17_Chr2g0320061 50.464 323 145 2 8 330 11 318 2.80e-111 326
Msa0717030 MtrunA17_Chr2g0292251 52.459 305 144 1 27 330 25 329 8.64e-111 326
Msa0717030 MtrunA17_Chr3g0114451 52.778 324 143 3 7 330 5 318 1.91e-110 324
Msa0717030 MtrunA17_Chr2g0320071 49.691 324 153 3 7 330 4 317 1.97e-110 323
Msa0717030 MtrunA17_Chr2g0320051 51.475 305 141 1 26 330 21 318 3.11e-110 323
Msa0717030 MtrunA17_Chr2g0292181 52.131 305 145 1 27 330 35 339 1.03e-109 323
Msa0717030 MtrunA17_Chr2g0292241 52.288 306 145 1 27 331 26 331 3.35e-109 322
Msa0717030 MtrunA17_Chr2g0292111 52.131 305 145 1 27 330 26 330 7.18e-109 321
Msa0717030 MtrunA17_Chr1g0175561 48.193 332 163 3 1 330 2 326 2.03e-108 319
Msa0717030 MtrunA17_Chr2g0292091 50.980 306 147 2 28 330 20 325 7.46e-108 318
Msa0717030 MtrunA17_Chr2g0291751 50.637 314 149 2 18 330 22 330 1.94e-107 317
Msa0717030 MtrunA17_Chr2g0292101 51.307 306 146 2 28 330 21 326 3.70e-107 316
Msa0717030 MtrunA17_Chr3g0129051 48.615 325 154 4 8 330 9 322 4.99e-107 315
Msa0717030 MtrunA17_Chr3g0106921 51.316 304 137 4 30 330 25 320 5.68e-107 315
Msa0717030 MtrunA17_Chr2g0292211 51.475 305 147 1 27 330 37 341 8.34e-107 316
Msa0717030 MtrunA17_Chr2g0299691 52.459 305 139 2 30 330 56 358 9.42e-107 316
Msa0717030 MtrunA17_Chr4g0013181 54.849 299 125 4 34 330 63 353 1.32e-106 315
Msa0717030 MtrunA17_Chr2g0320101 49.383 324 154 3 7 330 4 317 2.34e-106 313
Msa0717030 MtrunA17_Chr2g0292151 50.820 305 149 1 27 330 26 330 1.61e-105 312
Msa0717030 MtrunA17_Chr5g0432441 50.909 330 142 6 8 330 10 326 4.21e-105 310
Msa0717030 MtrunA17_Chr4g0070951 49.550 333 161 3 1 330 1 329 6.80e-105 310
Msa0717030 MtrunA17_Chr2g0320091 48.916 323 153 5 9 330 7 318 1.77e-104 308
Msa0717030 MtrunA17_Chr4g0068621 50.331 302 146 2 30 330 38 336 2.07e-104 309
Msa0717030 MtrunA17_Chr3g0129061 49.538 325 146 4 8 330 14 322 4.72e-104 308
Msa0717030 MtrunA17_Chr4g0043391 46.246 333 164 3 1 330 4 324 5.04e-104 308
Msa0717030 MtrunA17_Chr7g0244461 49.180 305 147 2 26 330 16 312 5.24e-104 307
Msa0717030 MtrunA17_Chr5g0432351 52.787 305 132 5 30 330 25 321 1.26e-103 306
Msa0717030 MtrunA17_Chr5g0402571 50.462 325 152 4 7 330 10 326 2.10e-103 306
Msa0717030 MtrunA17_Chr4g0038171 45.646 333 166 3 1 330 1 321 1.01e-102 304
Msa0717030 MtrunA17_Chr2g0292271 47.678 323 162 2 9 330 14 330 1.78e-102 305
Msa0717030 MtrunA17_Chr3g0129041 49.691 324 146 4 9 330 14 322 3.23e-102 303
Msa0717030 MtrunA17_Chr4g0038161 47.692 325 154 4 9 330 9 320 3.60e-102 303
Msa0717030 MtrunA17_Chr5g0432341 52.459 305 133 5 30 330 25 321 3.72e-102 303
Msa0717030 MtrunA17_Chr4g0038151 48.860 307 147 3 27 330 22 321 5.04e-102 302
Msa0717030 MtrunA17_Chr7g0244451 47.147 333 151 4 2 330 5 316 4.09e-100 297
Msa0717030 MtrunA17_Chr5g0402581 49.231 325 156 4 7 330 10 326 5.09e-100 297
Msa0717030 MtrunA17_Chr5g0432331 51.475 305 136 5 30 330 56 352 1.44e-99 297
Msa0717030 MtrunA17_Chr2g0292261 50.336 298 147 1 34 330 33 330 1.70e-99 297
Msa0717030 MtrunA17_Chr7g0224371 49.834 301 134 4 34 330 35 322 2.72e-99 295
Msa0717030 MtrunA17_Chr4g0013191 49.836 305 140 5 30 330 45 340 1.01e-98 295
Msa0717030 MtrunA17_Chr2g0292291 46.319 326 166 3 14 330 7 332 2.50e-97 291
Msa0717030 MtrunA17_Chr3g0106901 48.148 324 151 3 7 330 17 323 2.99e-97 290
Msa0717030 MtrunA17_Chr4g0013201 47.682 302 148 3 30 330 46 338 7.58e-96 287
Msa0717030 MtrunA17_Chr4g0013721 48.675 302 151 3 30 331 100 397 3.61e-95 288
Msa0717030 MtrunA17_Chr5g0421411 48.582 282 141 3 53 330 4 285 5.57e-94 281
Msa0717030 MtrunA17_Chr4g0013821 46.844 301 156 3 30 330 28 324 2.10e-93 281
Msa0717030 MtrunA17_Chr2g0322861 46.547 333 167 6 1 331 64 387 4.29e-93 282
Msa0717030 MtrunA17_Chr3g0107881 45.062 324 165 5 11 330 10 324 4.41e-93 280
Msa0717030 MtrunA17_Chr1g0213061 44.892 323 166 4 10 330 9 321 1.23e-91 276
Msa0717030 MtrunA17_Chr4g0024121 47.351 302 156 3 30 330 27 326 1.97e-89 270
Msa0717030 MtrunA17_Chr2g0279041 45.946 333 158 7 7 330 6 325 4.12e-87 265
Msa0717030 MtrunA17_Chr7g0268501 45.092 326 171 5 5 330 3 320 1.09e-86 263
Msa0717030 MtrunA17_Chr7g0268521 45.092 326 171 5 5 330 3 320 1.09e-86 263
Msa0717030 MtrunA17_Chr3g0128061 47.157 299 156 2 34 331 30 327 3.38e-86 262
Msa0717030 MtrunA17_Chr4g0076211 45.118 297 153 5 35 330 46 333 6.52e-83 254
Msa0717030 MtrunA17_Chr1g0194151 46.179 301 157 3 34 330 34 333 9.98e-83 254
Msa0717030 MtrunA17_Chr5g0405991 42.727 330 172 6 1 330 4 316 1.34e-82 253
Msa0717030 MtrunA17_Chr1g0164891 46.179 301 157 5 34 330 93 392 3.78e-82 254
Msa0717030 MtrunA17_Chr2g0296621 45.752 306 155 7 26 330 46 341 3.57e-81 250
Msa0717030 MtrunA17_Chr8g0371381 44.816 299 154 6 34 330 30 319 3.90e-81 249
Msa0717030 MtrunA17_Chr1g0194271 44.805 308 158 4 34 330 34 340 4.04e-80 247
Msa0717030 MtrunA17_Chr1g0204011 41.846 325 176 7 7 330 10 322 8.41e-80 246
Msa0717030 MtrunA17_Chr4g0063671 41.493 335 176 7 1 330 1 320 1.21e-78 243
Msa0717030 MtrunA17_Chr6g0460711 43.098 297 162 5 34 330 25 314 1.88e-77 239
Msa0717030 MtrunA17_Chr7g0254231 41.447 304 167 5 28 331 20 312 3.85e-77 239
Msa0717030 MtrunA17_Chr5g0432401 42.671 307 125 5 27 329 26 285 2.39e-76 236
Msa0717030 MtrunA17_Chr1g0181511 43.189 301 159 5 34 330 31 323 4.51e-76 236
Msa0717030 MtrunA17_Chr6g0477071 41.196 301 165 6 30 330 54 342 4.92e-76 237
Msa0717030 MtrunA17_Chr1g0157051 40.729 329 183 6 1 329 1 317 1.27e-74 232
Msa0717030 MtrunA17_Chr1g0188431 39.628 323 183 6 8 330 17 327 1.35e-74 233
Msa0717030 MtrunA17_Chr8g0364291 40.741 324 185 4 10 331 7 325 5.31e-74 231
Msa0717030 MtrunA17_Chr7g0254201 42.088 297 164 6 34 330 24 312 5.87e-74 231
Msa0717030 MtrunA17_Chr7g0225221 42.715 302 166 4 30 330 25 320 1.62e-72 227
Msa0717030 MtrunA17_Chr5g0401431 39.938 323 187 5 8 326 6 325 1.13e-71 225
Msa0717030 MtrunA17_Chr1g0181431 41.333 300 166 4 34 330 31 323 1.74e-71 224
Msa0717030 MtrunA17_Chr4g0046131 39.104 335 188 6 7 326 9 342 1.85e-71 225
Msa0717030 MtrunA17_Chr1g0148021 40.426 329 186 5 5 330 7 328 1.66e-70 222
Msa0717030 MtrunA17_Chr6g0467121 38.235 340 183 9 2 330 40 363 6.79e-70 222
Msa0717030 MtrunA17_Chr1g0181481 41.333 300 166 4 34 330 31 323 1.12e-69 220
Msa0717030 MtrunA17_Chr4g0075241 38.926 298 178 3 34 330 33 327 2.42e-69 219
Msa0717030 MtrunA17_Chr6g0467161 36.858 331 189 6 8 330 18 336 9.06e-69 218
Msa0717030 MtrunA17_Chr6g0467251 39.697 330 184 7 5 331 12 329 2.28e-68 217
Msa0717030 MtrunA17_Chr4g0072091 39.867 301 172 4 34 330 28 323 2.60e-68 216
Msa0717030 MtrunA17_Chr2g0278671 42.532 308 162 9 30 330 24 323 4.70e-68 216
Msa0717030 MtrunA17_Chr2g0316481 37.101 345 182 7 18 329 63 405 1.96e-67 217
Msa0717030 MtrunA17_Chr2g0316791 37.464 347 178 8 18 329 63 405 2.41e-67 216
Msa0717030 MtrunA17_Chr1g0197411 36.474 329 201 5 5 330 7 330 2.98e-67 214
Msa0717030 MtrunA17_Chr3g0136751 41.667 300 166 4 34 330 29 322 8.79e-67 213
Msa0717030 MtrunA17_Chr2g0279061 47.126 261 128 5 74 330 12 266 1.05e-66 210
Msa0717030 MtrunA17_Chr2g0316831 37.391 345 181 8 18 329 99 441 1.85e-66 215
Msa0717030 MtrunA17_Chr4g0053871 40.123 324 183 6 6 326 5 320 3.98e-66 211
Msa0717030 MtrunA17_Chr2g0329641 37.092 337 193 9 5 330 7 335 1.66e-65 209
Msa0717030 MtrunA17_Chr2g0316191 35.838 346 186 7 18 329 63 406 4.84e-65 211
Msa0717030 MtrunA17_Chr4g0074851 36.923 325 192 5 8 326 7 324 1.45e-64 207
Msa0717030 MtrunA17_Chr6g0451571 35.168 327 200 6 7 330 17 334 2.38e-63 204
Msa0717030 MtrunA17_Chr2g0311251 36.280 328 174 7 34 329 15 339 8.24e-60 195
Msa0717030 MtrunA17_Chr2g0311241 33.420 386 180 8 18 329 47 429 1.30e-59 197
Msa0717030 MtrunA17_Chr3g0114461 50.769 195 89 1 136 330 5 192 2.38e-59 189
Msa0717030 MtrunA17_Chr5g0413051 36.570 309 188 5 28 330 71 377 4.07e-59 194
Msa0717030 MtrunA17_Chr2g0292281 45.714 210 101 3 123 330 18 216 2.01e-51 170
Msa0717030 MtrunA17_Chr2g0316811 39.076 238 126 4 18 237 37 273 1.36e-47 163
Msa0717030 MtrunA17_Chr3g0114491 61.468 109 42 0 30 138 18 126 2.10e-41 141
Msa0717030 MtrunA17_Chr4g0004591 30.063 316 160 4 34 329 81 355 9.26e-41 145
Msa0717030 MtrunA17_Chr2g0316141 31.488 289 145 8 76 331 11 279 2.84e-37 134
Msa0717030 MtrunA17_Chr2g0316181 31.488 289 145 8 76 331 11 279 2.84e-37 134
Msa0717030 MtrunA17_Chr1g0181501 36.269 193 113 4 141 330 4 189 4.34e-33 121
Msa0717030 MtrunA17_Chr5g0432321 48.387 124 56 2 151 274 17 132 3.37e-29 108
Msa0717030 MtrunA17_Chr3g0104101 41.844 141 78 3 194 330 9 149 5.19e-26 101
Msa0717030 MtrunA17_Chr1g0181491 45.794 107 56 2 34 140 16 120 4.66e-23 93.2
Msa0717030 MtrunA17_Chr6g0468731 61.972 71 23 2 69 139 22 88 2.94e-21 86.7
Msa0717030 MtrunA17_Chr4g0013811 53.333 75 35 0 140 214 5 79 1.17e-19 82.0
Msa0717030 MtrunA17_Chr7g0254181 40.541 111 58 2 91 196 15 122 5.24e-19 82.8
Msa0717030 MtrunA17_Chr5g0432361 42.991 107 54 3 224 329 8 108 5.39e-18 78.6
Msa0717030 MtrunA17_Chr3g0137751 28.517 263 121 8 61 311 105 312 5.57e-17 80.5
Msa0717030 MtrunA17_Chr7g0254171 47.297 74 38 1 75 148 3 75 5.41e-16 73.9
Msa0717030 MtrunA17_Chr7g0268491 52.000 75 34 2 256 330 25 97 5.73e-16 72.4
Msa0717030 MtrunA17_Chr1g0196191 55.385 65 28 1 72 136 27 90 3.38e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0717030 AT5G66390.1 75.150 334 80 2 1 331 1 334 0.0 532
Msa0717030 AT4G36430.1 69.811 318 96 0 14 331 14 331 1.56e-170 477
Msa0717030 AT2G18150.1 67.976 331 100 1 7 331 7 337 5.36e-170 476
Msa0717030 AT2G18140.1 64.048 331 114 1 6 331 6 336 8.40e-158 445
Msa0717030 AT3G50990.1 64.417 326 111 1 11 331 17 342 5.00e-154 436
Msa0717030 AT1G44970.1 65.232 302 104 1 30 330 45 346 2.15e-140 401
Msa0717030 AT2G35380.1 53.896 308 133 3 30 330 30 335 3.13e-110 324
Msa0717030 AT5G06720.1 50.993 302 147 1 30 330 32 333 9.50e-110 323
Msa0717030 AT5G05340.1 49.837 307 144 3 26 330 26 324 1.79e-107 317
Msa0717030 AT4G08770.1 50.820 305 147 2 30 331 24 328 4.65e-106 314
Msa0717030 AT5G19890.1 51.242 322 148 4 13 331 13 328 3.02e-105 311
Msa0717030 AT4G08780.1 50.654 306 146 3 30 331 24 328 3.09e-105 312
Msa0717030 AT1G14550.1 48.457 324 154 3 8 330 10 321 6.69e-105 310
Msa0717030 AT1G49570.1 53.535 297 134 3 33 326 51 346 8.27e-104 308
Msa0717030 AT3G32980.1 50.164 305 149 2 30 331 31 335 1.73e-103 308
Msa0717030 AT3G49110.1 49.521 313 155 2 22 331 25 337 2.08e-103 307
Msa0717030 AT5G06730.1 47.682 302 157 1 30 330 33 334 8.27e-103 306
Msa0717030 AT2G38390.1 47.712 306 158 2 27 330 28 333 9.92e-102 303
Msa0717030 AT5G58400.1 45.872 327 160 5 7 330 13 325 1.89e-101 301
Msa0717030 AT4G16270.1 50.671 298 143 3 34 330 54 348 2.51e-100 299
Msa0717030 AT3G49120.1 49.836 305 150 2 30 331 32 336 3.14e-100 299
Msa0717030 AT2G38380.1 48.185 303 155 2 30 330 31 333 1.60e-97 292
Msa0717030 AT2G22420.1 48.505 301 151 3 30 330 23 319 3.74e-96 288
Msa0717030 AT1G14540.1 44.753 324 164 2 7 330 7 315 1.86e-95 286
Msa0717030 AT5G58390.1 46.201 329 160 5 5 330 2 316 5.46e-95 285
Msa0717030 AT1G68850.1 44.242 330 178 4 7 330 6 335 2.15e-94 284
Msa0717030 AT3G03670.1 43.827 324 174 3 7 330 6 321 5.37e-90 272
Msa0717030 AT5G19880.1 42.202 327 179 4 8 330 9 329 6.38e-87 265
Msa0717030 AT4G11290.1 46.154 299 158 3 34 330 29 326 4.23e-86 262
Msa0717030 AT1G05260.1 42.857 329 183 4 5 331 1 326 4.66e-86 262
Msa0717030 AT5G15180.1 46.465 297 156 3 34 330 36 329 2.58e-85 260
Msa0717030 AT5G64120.1 43.771 297 160 5 34 330 39 328 9.98e-84 256
Msa0717030 AT3G21770.1 44.737 304 159 4 27 326 26 324 2.44e-82 253
Msa0717030 AT1G71695.1 42.773 339 172 9 5 330 10 339 7.89e-82 253
Msa0717030 AT5G17820.1 40.303 330 180 6 1 330 1 313 9.33e-81 248
Msa0717030 AT5G42180.1 45.000 300 159 4 30 329 23 316 3.67e-80 247
Msa0717030 AT5G17820.2 40.303 330 180 6 1 330 54 366 9.29e-80 248
Msa0717030 AT2G35380.2 50.602 249 114 3 89 330 1 247 1.76e-79 243
Msa0717030 AT3G01190.1 44.237 321 168 5 10 330 12 321 2.80e-79 245
Msa0717030 AT1G05240.1 43.771 297 158 5 34 326 30 321 4.82e-79 244
Msa0717030 AT1G05250.1 43.771 297 158 5 34 326 30 321 4.82e-79 244
Msa0717030 AT2G39040.1 44.444 315 165 6 23 330 39 350 1.22e-78 244
Msa0717030 AT2G41480.1 44.371 302 157 5 34 330 33 328 2.40e-78 243
Msa0717030 AT5G51890.1 40.549 328 177 8 7 330 9 322 5.21e-77 239
Msa0717030 AT5G39580.1 43.960 298 159 6 34 330 29 319 1.36e-76 238
Msa0717030 AT1G30870.1 44.984 309 158 6 26 331 47 346 7.26e-76 237
Msa0717030 AT5G64100.1 44.147 299 157 5 34 330 41 331 2.59e-74 232
Msa0717030 AT5G47000.1 38.532 327 191 5 7 331 13 331 1.39e-72 228
Msa0717030 AT4G26010.1 41.195 318 172 7 15 331 7 310 4.10e-72 226
Msa0717030 AT4G26010.2 41.195 318 172 7 15 331 35 338 6.45e-72 226
Msa0717030 AT4G33870.1 36.607 336 176 4 29 329 67 400 1.48e-71 228
Msa0717030 AT5G64110.1 43.333 300 160 5 34 330 38 330 2.81e-71 224
Msa0717030 AT2G37130.1 40.909 308 171 5 27 330 27 327 4.04e-71 224
Msa0717030 AT2G37130.2 41.196 301 166 5 34 330 3 296 8.00e-71 222
Msa0717030 AT4G37520.1 39.474 304 180 3 30 330 27 329 1.86e-70 222
Msa0717030 AT4G37530.1 40.132 304 178 3 30 330 27 329 4.76e-70 221
Msa0717030 AT2G18980.1 38.739 333 191 5 1 330 1 323 1.83e-69 219
Msa0717030 AT1G24110.1 40.000 305 177 5 30 331 22 323 3.21e-69 219
Msa0717030 AT4G33420.1 39.210 329 182 8 2 330 15 325 3.32e-69 219
Msa0717030 AT3G28200.1 39.604 303 174 4 30 330 21 316 4.23e-69 218
Msa0717030 AT5G14130.1 37.963 324 188 5 8 330 19 330 6.95e-69 218
Msa0717030 AT4G37520.2 39.145 304 178 4 30 330 27 326 1.10e-68 218
Msa0717030 AT4G31760.1 40.803 299 170 4 34 330 33 326 1.12e-68 218
Msa0717030 AT4G33420.2 39.210 329 182 8 2 330 62 372 1.84e-68 219
Msa0717030 AT4G30170.1 39.355 310 176 6 26 330 23 325 2.22e-68 217
Msa0717030 AT5G14130.2 37.963 324 188 5 8 330 60 371 2.76e-68 218
Msa0717030 AT1G77100.1 40.594 303 163 8 34 330 28 319 4.65e-68 216
Msa0717030 AT2G24800.1 41.667 300 167 5 34 330 35 329 5.20e-67 213
Msa0717030 AT2G34060.1 38.066 331 194 6 7 327 14 343 6.05e-67 214
Msa0717030 AT4G25980.1 38.411 302 176 5 34 330 30 326 1.27e-66 213
Msa0717030 AT4G17690.1 38.614 303 178 4 30 330 26 322 2.02e-66 212
Msa0717030 AT1G34510.1 39.432 317 177 7 16 331 8 310 2.42e-66 211
Msa0717030 AT5G40150.1 38.111 307 182 4 26 330 28 328 3.19e-66 211
Msa0717030 AT4G21960.1 39.333 300 172 4 34 330 35 327 1.11e-65 210
Msa0717030 AT5G22410.1 37.798 336 189 11 2 331 5 326 2.16e-65 209
Msa0717030 AT5G67400.1 39.145 304 181 3 30 330 27 329 5.10e-64 206
Msa0717030 AT3G49960.1 38.333 300 181 3 34 330 31 329 1.33e-63 205
Msa0717030 AT4G37530.2 41.365 249 143 2 34 279 31 279 5.24e-60 194
Msa0717030 AT2G43480.1 37.785 307 178 7 29 330 37 335 1.37e-59 194
Msa0717030 AT5G24070.1 33.923 339 204 7 5 330 4 335 3.29e-58 191
Msa0717030 AT3G17070.1 35.398 339 183 10 13 330 16 339 1.04e-57 190
Msa0717030 AT4G25980.2 45.732 164 85 3 34 197 75 234 4.60e-44 153
Msa0717030 AT5G39580.2 46.784 171 86 3 34 204 29 194 3.06e-43 149
Msa0717030 AT3G17070.2 33.333 288 162 9 58 330 4 276 6.76e-41 144
Msa0717030 AT2G24800.2 46.626 163 83 1 34 196 35 193 1.53e-40 142
Msa0717030 AT4G32320.1 27.609 297 140 10 29 311 86 321 2.23e-15 76.3
Msa0717030 AT3G42570.1 36.111 144 78 4 55 195 15 147 2.49e-15 72.8
Msa0717030 AT4G08390.3 25.641 273 140 11 64 312 126 359 8.35e-12 65.9
Msa0717030 AT4G08390.2 25.641 273 140 11 64 312 127 360 8.61e-12 65.9
Msa0717030 AT4G08390.5 25.641 273 140 11 64 312 127 360 8.61e-12 65.9
Msa0717030 AT4G08390.1 25.641 273 140 11 64 312 127 360 8.61e-12 65.9

Find 79 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACCCCTTGATCCTGTTAA+AGG 0.173311 5_1:+10590928 None:intergenic
CTTGACAATCTCTTCAACTT+TGG 0.243603 5_1:+10598560 None:intergenic
AGTCTAGGACAAACAGATTT+TGG 0.271787 5_1:+10591142 None:intergenic
TAATAAGATGTTTCAAGAAT+TGG 0.295395 5_1:-10590702 Msa0717030:three_prime_UTR
CTGACTTGCCATTCCCAGTT+TGG 0.295882 5_1:+10591229 None:intergenic
ATGGTTTGGAATGTATTGTT+AGG 0.303652 5_1:+10597807 None:intergenic
GTTGATCTAGTTGCTCTATC+TGG 0.307619 5_1:-10597750 Msa0717030:intron
GGAAACATTACTCCTTTAAC+AGG 0.313337 5_1:-10590940 Msa0717030:CDS
TGTGTCCTGAGTATAAAATT+TGG 0.318039 5_1:-10590767 Msa0717030:three_prime_UTR
CTTAACTAAATTCAAGCTTA+AGG 0.333245 5_1:-10597784 Msa0717030:CDS
TGAATTTAGTTAAGATGGTT+TGG 0.336203 5_1:+10597793 None:intergenic
TTGACAATCTCTTCAACTTT+GGG 0.338379 5_1:+10598561 None:intergenic
CAAAGACTCTACAACCAAAC+TGG 0.339170 5_1:-10591243 Msa0717030:CDS
TTAACTAAATTCAAGCTTAA+GGG 0.348519 5_1:-10597783 Msa0717030:CDS
CCAAGTTGGGATGTACCTTT+AGG 0.355271 5_1:-10597885 Msa0717030:CDS
CAAATCCTCTAGCTGAATTA+CGG 0.358640 5_1:+10598106 None:intergenic
GAGTATAAAATTTGGGCTTT+TGG 0.362183 5_1:-10590759 Msa0717030:three_prime_UTR
GTGTCCTGAGTATAAAATTT+GGG 0.365686 5_1:-10590766 Msa0717030:three_prime_UTR
CGCACTCGGTGCCCAAGATC+TGG 0.377599 5_1:-10591171 Msa0717030:CDS
CCTCTAGCTGAATTACGGTT+TGG 0.384144 5_1:+10598111 None:intergenic
AAGCTTGAATTTAGTTAAGA+TGG 0.387881 5_1:+10597788 None:intergenic
GCAATTGAGCTGCATAGTTT+TGG 0.388025 5_1:+10591193 None:intergenic
TCCCATCTTCACCATGGACT+TGG 0.398678 5_1:+10590960 None:intergenic
TATCAGCACAAGAGACTGTC+TGG 0.410605 5_1:+10598040 None:intergenic
TTTGGTCTCCACCAGATCTT+GGG 0.428573 5_1:+10591160 None:intergenic
TCAGACTGGTGGACCAAGTT+GGG 0.428730 5_1:-10597898 Msa0717030:intron
TGGTTTGGAATGTATTGTTA+GGG 0.440392 5_1:+10597808 None:intergenic
TGCCAAGTCCATGGTGAAGA+TGG 0.446450 5_1:-10590962 Msa0717030:CDS
ACAGAATTTCATCAGAACTT+AGG 0.456756 5_1:+10591058 None:intergenic
CAGCAAGGAAGCAGCCATGC+GGG 0.463288 5_1:+10598506 None:intergenic
GTAGAGTCTTTGTCTAAAGC+TGG 0.469738 5_1:+10591254 None:intergenic
TTACTCCTTTAACAGGATCA+AGG 0.477963 5_1:-10590933 Msa0717030:CDS
TGGAATGTATTGTTAGGGGC+AGG 0.478296 5_1:+10597813 None:intergenic
ATGCAGCTCAATTGCGCACT+CGG 0.490653 5_1:-10591185 Msa0717030:CDS
TCTCTTGGTGCAAGCATAAG+TGG 0.493124 5_1:-10597852 Msa0717030:CDS
CACGAATCATCGTAAAATTG+AGG 0.496099 5_1:+10598585 None:intergenic
CTCTACAACCAAACTGGGAA+TGG 0.498579 5_1:-10591237 Msa0717030:CDS
AGAACTTAGGAGACCCTTGT+TGG 0.511655 5_1:+10591071 None:intergenic
TTAGGAAGAAGAGATTCTCT+TGG 0.511790 5_1:-10597867 Msa0717030:CDS
AGAGAATCTCTTCTTCCTAA+AGG 0.516192 5_1:+10597870 None:intergenic
TACTCCTTTAACAGGATCAA+GGG 0.516424 5_1:-10590932 Msa0717030:CDS
GGTGCACCGCGAATCTCCTA+TGG 0.523145 5_1:+10591275 None:intergenic
CCTAAAGGTACATCCCAACT+TGG 0.526869 5_1:+10597885 None:intergenic
TGAACAATTTGCCAAGTCCA+TGG 0.530596 5_1:-10590971 Msa0717030:CDS
ATTCAATCCTTTCAGACTGG+TGG 0.533760 5_1:-10597909 Msa0717030:intron
AGCGACAGCCTTAGCAACTA+CGG 0.534152 5_1:+10598536 None:intergenic
TTCAGACTGGTGGACCAAGT+TGG 0.534896 5_1:-10597899 Msa0717030:intron
GCCAAGTCCATGGTGAAGAT+GGG 0.541716 5_1:-10590961 Msa0717030:CDS
TGTCAAGTCCGTAGTTGCTA+AGG 0.541793 5_1:-10598544 Msa0717030:CDS
CATCGTAAAATTGAGGGTAG+AGG 0.558315 5_1:+10598592 None:intergenic
ACGAATCATCGTAAAATTGA+GGG 0.561360 5_1:+10598586 None:intergenic
TTACCGGTGTGACAAAGTCT+AGG 0.570159 5_1:+10591127 None:intergenic
CCAAACCGTAATTCAGCTAG+AGG 0.570737 5_1:-10598111 Msa0717030:CDS
CAAGAACTTATTGACCAACA+AGG 0.589061 5_1:-10591085 Msa0717030:CDS
GAACAATCATCAGCGAAAAG+AGG 0.590852 5_1:-10598140 Msa0717030:CDS
AGCAAGGAAGCAGCCATGCG+GGG 0.595766 5_1:+10598507 None:intergenic
ATACCTTGACAAAACAGTCA+TGG 0.599142 5_1:+10598472 None:intergenic
ATCAGCACAAGAGACTGTCT+GGG 0.599732 5_1:+10598041 None:intergenic
AATCAGAAAACGCTGCAGAA+AGG 0.603094 5_1:-10590905 Msa0717030:CDS
GTTATAGGTAGCCACACCAT+AGG 0.605653 5_1:-10591291 Msa0717030:intron
GCCACACCATAGGAGATTCG+CGG 0.611411 5_1:-10591281 Msa0717030:CDS
TGTCGCTAAAGAACCCCGCA+TGG 0.629260 5_1:-10598520 Msa0717030:CDS
ACCGCGAATCTCCTATGGTG+TGG 0.629403 5_1:+10591280 None:intergenic
AATGTTTCCCATCTTCACCA+TGG 0.629418 5_1:+10590954 None:intergenic
GGGACACTCTTTCTCTACAG+CGG 0.636108 5_1:+10598062 None:intergenic
AAAGACTCTACAACCAAACT+GGG 0.636762 5_1:-10591242 Msa0717030:CDS
ACTCGGTGCCCAAGATCTGG+TGG 0.639184 5_1:-10591168 Msa0717030:CDS
TGTCCTAGACTTTGTCACAC+CGG 0.643380 5_1:-10591130 Msa0717030:CDS
GGACACAGCGACTATGCCAA+TGG 0.644492 5_1:+10590783 None:intergenic
ACTCCTTTAACAGGATCAAG+GGG 0.648428 5_1:-10590931 Msa0717030:CDS
AAGAACTTATTGACCAACAA+GGG 0.649683 5_1:-10591084 Msa0717030:CDS
ATGGAAATGTAGTCTCAGCA+AGG 0.653675 5_1:+10598491 None:intergenic
TCAGCAAGGAAGCAGCCATG+CGG 0.656575 5_1:+10598505 None:intergenic
AAATACTATCATTTCCACCA+TGG 0.660518 5_1:-10598760 Msa0717030:five_prime_UTR
GGTTTGGAATGTATTGTTAG+GGG 0.668824 5_1:+10597809 None:intergenic
TCAGTGTTGCTAGATAGCAG+TGG 0.688736 5_1:-10598162 Msa0717030:CDS
TCAGCACAAGAGACTGTCTG+GGG 0.742569 5_1:+10598042 None:intergenic
GGATTGGATGAATACCATGG+TGG 0.761315 5_1:+10598746 None:intergenic
ACTGGATTGGATGAATACCA+TGG 0.762767 5_1:+10598743 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATATAACTTTATAATTA+TGG + chr5_1:10592541-10592560 None:intergenic 10.0%
!!! TTAATAATTATTTTATCTCT+TGG - chr5_1:10593992-10594011 Msa0717030:intron 10.0%
!! TTTATAAAAAAGTGAATATT+CGG + chr5_1:10594540-10594559 None:intergenic 10.0%
!!! TATTTTGAAACAAATTTTTT+TGG - chr5_1:10595045-10595064 Msa0717030:intron 10.0%
!! TAATAAAAATTATGTTAAGT+TGG - chr5_1:10595312-10595331 Msa0717030:intron 10.0%
!!! CTTAGATTTTTAATTTATTT+TGG - chr5_1:10596021-10596040 Msa0717030:intron 10.0%
!!! TTTATTGAAACATTTTTTAA+GGG + chr5_1:10596261-10596280 None:intergenic 10.0%
!!! TTTTATTGAAACATTTTTTA+AGG + chr5_1:10596262-10596281 None:intergenic 10.0%
!! TAGTATATATAAAAAAAAGA+GGG + chr5_1:10596668-10596687 None:intergenic 10.0%
!!! TTTTTATATATTAAACCTTA+CGG + chr5_1:10597234-10597253 None:intergenic 10.0%
!!! TTGTTATTTTATTTTATTCT+TGG - chr5_1:10597386-10597405 Msa0717030:intron 10.0%
!!! AATTAGTTTAATAATTGAAA+AGG + chr5_1:10597530-10597549 None:intergenic 10.0%
!!! TTTTTTTTGATAATGACAAA+AGG - chr5_1:10591978-10591997 Msa0717030:intron 15.0%
!!! TTTTTTTGATAATGACAAAA+GGG - chr5_1:10591979-10591998 Msa0717030:intron 15.0%
!!! TATCATTTTTTTTACCTTAT+TGG - chr5_1:10592072-10592091 Msa0717030:intron 15.0%
!! AAAAATGAATTTAATTAACC+TGG - chr5_1:10592223-10592242 Msa0717030:intron 15.0%
!! AGGTATTAAAAATTGTAAAT+TGG - chr5_1:10592485-10592504 Msa0717030:intron 15.0%
!! TTATAAAGTTATATCATCAT+TGG - chr5_1:10592544-10592563 Msa0717030:intron 15.0%
!!! GAATATATTTGAAATGATAT+AGG + chr5_1:10593944-10593963 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr5_1:10594919-10594938 None:intergenic 15.0%
!! AAACTAATCAATAGTTAATA+AGG + chr5_1:10594928-10594947 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr5_1:10594942-10594961 Msa0717030:intron 15.0%
!!! TTTATATATCTCTAAAAAAC+AGG - chr5_1:10595335-10595354 Msa0717030:intron 15.0%
!! ACAAATTCAAAATAAAACAA+TGG + chr5_1:10595523-10595542 None:intergenic 15.0%
!! TTATATCATATCCATAAATA+TGG - chr5_1:10596637-10596656 Msa0717030:intron 15.0%
!! GTAGTATATATAAAAAAAAG+AGG + chr5_1:10596669-10596688 None:intergenic 15.0%
!!! TACTTTAATTTCTTTTCTTT+TGG + chr5_1:10597475-10597494 None:intergenic 15.0%
!! GTAAACAATGTTTAAAAATG+TGG - chr5_1:10591011-10591030 Msa0717030:CDS 20.0%
!!! TGTTATTTTTTAAAACCTTG+TGG - chr5_1:10591118-10591137 Msa0717030:CDS 20.0%
!!! ACTTGATATTTAACTTTTGA+TGG + chr5_1:10591516-10591535 None:intergenic 20.0%
!! TTAACTAAATTCAAGCTTAA+GGG - chr5_1:10591667-10591686 Msa0717030:intron 20.0%
!!! TTTTTTGATAATGACAAAAG+GGG - chr5_1:10591980-10591999 Msa0717030:intron 20.0%
!! TATATGTGACAAGTATTTAA+AGG - chr5_1:10592006-10592025 Msa0717030:intron 20.0%
!! AAATTTCAAATGCCATTAAT+GGG + chr5_1:10592040-10592059 None:intergenic 20.0%
!! AAAATTTCAAATGCCATTAA+TGG + chr5_1:10592041-10592060 None:intergenic 20.0%
!! AAGGTAAAAAAAATGATAGA+AGG + chr5_1:10592070-10592089 None:intergenic 20.0%
!! TAACTTATAGATAAGAAGAA+TGG + chr5_1:10592151-10592170 None:intergenic 20.0%
!!! ATTTCAAATTTGTTCTTCAT+AGG - chr5_1:10593138-10593157 Msa0717030:intron 20.0%
!! ATTACACAGAAAATTGTTTA+AGG + chr5_1:10593478-10593497 None:intergenic 20.0%
!! GTACATTCACATTAAAATTT+CGG - chr5_1:10594345-10594364 Msa0717030:intron 20.0%
!! TGCAGATAATTAAACAAAAA+AGG + chr5_1:10594458-10594477 None:intergenic 20.0%
!! GAATTAGTAAACAAAATTAG+AGG + chr5_1:10594633-10594652 None:intergenic 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr5_1:10594885-10594904 Msa0717030:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr5_1:10595005-10595024 Msa0717030:intron 20.0%
!!! CTTTAATTTTGTCATAATTG+TGG - chr5_1:10595442-10595461 Msa0717030:intron 20.0%
!! TATCACATTGTAATTAGAAA+AGG - chr5_1:10595989-10596008 Msa0717030:intron 20.0%
!! ACAAATTATCACAAAACAAA+GGG + chr5_1:10596383-10596402 None:intergenic 20.0%
!! TACAAATTATCACAAAACAA+AGG + chr5_1:10596384-10596403 None:intergenic 20.0%
!!! TTTGTTTTGTGATAATTTGT+AGG - chr5_1:10596383-10596402 Msa0717030:intron 20.0%
!! TATTAATTTACGTAACGTAT+TGG - chr5_1:10596415-10596434 Msa0717030:intron 20.0%
!! AAATGAGACATAAAAATTGA+TGG + chr5_1:10596495-10596514 None:intergenic 20.0%
!! ATATACTTGCAAAATTATAC+AGG - chr5_1:10596596-10596615 Msa0717030:intron 20.0%
!! TATACTTGCAAAATTATACA+GGG - chr5_1:10596597-10596616 Msa0717030:intron 20.0%
!! TATATATAAAAAAAAGAGGG+TGG + chr5_1:10596665-10596684 None:intergenic 20.0%
!! ATATTTCATCAGAATAAAGT+GGG + chr5_1:10596696-10596715 None:intergenic 20.0%
!! AATATTTCATCAGAATAAAG+TGG + chr5_1:10596697-10596716 None:intergenic 20.0%
!! AACCTAAAAAATGCAAATAA+TGG - chr5_1:10597328-10597347 Msa0717030:intron 20.0%
!! GAAGAAAATTGAGATAAATT+TGG + chr5_1:10598082-10598101 None:intergenic 20.0%
!!! AATTTTCTTCATTTGAGTTT+TGG - chr5_1:10598092-10598111 Msa0717030:CDS 20.0%
!! ACAAATTCTTGTAATGTTAT+AGG - chr5_1:10598144-10598163 Msa0717030:CDS 20.0%
!! TAATAAGATGTTTCAAGAAT+TGG - chr5_1:10598748-10598767 Msa0717030:five_prime_UTR 20.0%
! TGATCTTGAAAGAAAAACAA+TGG - chr5_1:10590753-10590772 Msa0717030:three_prime_UTR 25.0%
! AATGTTTAAAAATGTGGTCA+TGG - chr5_1:10591017-10591036 Msa0717030:CDS 25.0%
! TGATCTATGAGTTGTATATT+GGG - chr5_1:10591181-10591200 Msa0717030:CDS 25.0%
! TGAATTTAGTTAAGATGGTT+TGG + chr5_1:10591660-10591679 None:intergenic 25.0%
! AAGCTTGAATTTAGTTAAGA+TGG + chr5_1:10591665-10591684 None:intergenic 25.0%
! CTTAACTAAATTCAAGCTTA+AGG - chr5_1:10591666-10591685 Msa0717030:intron 25.0%
! AGATGAAATAGATTAGTACT+AGG + chr5_1:10591732-10591751 None:intergenic 25.0%
!!! TTTTTGATAATGACAAAAGG+GGG - chr5_1:10591981-10592000 Msa0717030:intron 25.0%
! AATTTCAAATGCCATTAATG+GGG + chr5_1:10592039-10592058 None:intergenic 25.0%
!! TAATTAACAAGTTGACTTTG+GGG + chr5_1:10592351-10592370 None:intergenic 25.0%
!! CTAATTAACAAGTTGACTTT+GGG + chr5_1:10592352-10592371 None:intergenic 25.0%
!! TCTAATTAACAAGTTGACTT+TGG + chr5_1:10592353-10592372 None:intergenic 25.0%
! TTTGTTTGTCATCATCAAAA+AGG - chr5_1:10592402-10592421 Msa0717030:intron 25.0%
! TTGTTTGTCATCATCAAAAA+GGG - chr5_1:10592403-10592422 Msa0717030:intron 25.0%
! TGTTTAACAATGAACCTTAA+AGG - chr5_1:10592447-10592466 Msa0717030:intron 25.0%
! GTTTAACAATGAACCTTAAA+GGG - chr5_1:10592448-10592467 Msa0717030:intron 25.0%
! TAATATTTGTTCAAGTGTAC+AGG - chr5_1:10592514-10592533 Msa0717030:intron 25.0%
!! AACAACAAAAATTTGAAGCT+TGG - chr5_1:10592596-10592615 Msa0717030:intron 25.0%
!!! CTGTGTAATTTTGTTTAGTT+AGG - chr5_1:10593489-10593508 Msa0717030:intron 25.0%
!!! ACGAGTCTTTTATTAGTTTT+TGG + chr5_1:10594301-10594320 None:intergenic 25.0%
! CATGACTTAACAAGTATAAA+TGG - chr5_1:10594734-10594753 Msa0717030:intron 25.0%
! ACTTAACAAGTATAAATGGT+TGG - chr5_1:10594738-10594757 Msa0717030:intron 25.0%
! TGATATCATATTATCTATCC+CGG - chr5_1:10595111-10595130 Msa0717030:intron 25.0%
! AACATTTGACATTGTGTAAA+CGG + chr5_1:10595205-10595224 None:intergenic 25.0%
!!! CTTTTTCAAAGTGAATAAGT+GGG - chr5_1:10595714-10595733 Msa0717030:intron 25.0%
!!! TTTTTCAAAGTGAATAAGTG+GGG - chr5_1:10595715-10595734 Msa0717030:intron 25.0%
! TTCCTCATATGACTTAAATA+AGG - chr5_1:10595887-10595906 Msa0717030:intron 25.0%
!! ATCCTTATTTAAGTCATATG+AGG + chr5_1:10595892-10595911 None:intergenic 25.0%
! ACATTGTAATTAGAAAAGGT+TGG - chr5_1:10595993-10596012 Msa0717030:intron 25.0%
! TTCTGATCTTGATAAATCTT+CGG + chr5_1:10596074-10596093 None:intergenic 25.0%
! GCTTTCTTCAACATATTTAA+CGG - chr5_1:10596291-10596310 Msa0717030:intron 25.0%
! TACGTAAATTAATAAGTAGG+TGG + chr5_1:10596409-10596428 None:intergenic 25.0%
! CGTTACGTAAATTAATAAGT+AGG + chr5_1:10596412-10596431 None:intergenic 25.0%
! TTATGTATGCTTTGCAAATT+TGG - chr5_1:10596535-10596554 Msa0717030:intron 25.0%
! TATGTATGCTTTGCAAATTT+GGG - chr5_1:10596536-10596555 Msa0717030:intron 25.0%
!! TTGTTTCTTTACGAAAACAA+AGG - chr5_1:10596803-10596822 Msa0717030:intron 25.0%
!! ATTCTTTTCTAATCCTCAAT+TGG + chr5_1:10596840-10596859 None:intergenic 25.0%
! ATTTCTATGCTTAAAACTCT+TGG - chr5_1:10596926-10596945 Msa0717030:intron 25.0%
!! TTCTTGGATTGTATTTTTCA+TGG - chr5_1:10597402-10597421 Msa0717030:intron 25.0%
!! GAAATTAAAGTAACTCCTTT+TGG - chr5_1:10597483-10597502 Msa0717030:intron 25.0%
! TATAACTGAATTGATCTCTT+TGG - chr5_1:10597554-10597573 Msa0717030:intron 25.0%
!!! TTTAAAGTTTTAGCAGTCAA+AGG - chr5_1:10597728-10597747 Msa0717030:intron 25.0%
!!! AAGCTAATCATTTTCTAAAG+AGG - chr5_1:10597789-10597808 Msa0717030:CDS 25.0%
!!! AAATTAACTGTTGATTCACA+GGG + chr5_1:10597829-10597848 None:intergenic 25.0%
!!! TAAATTAACTGTTGATTCAC+AGG + chr5_1:10597830-10597849 None:intergenic 25.0%
!!! TCAGTTTTATGTTTATGTGT+TGG - chr5_1:10597858-10597877 Msa0717030:CDS 25.0%
AAATACTATCATTTCCACCA+TGG - chr5_1:10590690-10590709 Msa0717030:three_prime_UTR 30.0%
! CAAAATGTTTTCAACTGGAT+TGG + chr5_1:10590723-10590742 None:intergenic 30.0%
! CAGAACAAAATGTTTTCAAC+TGG + chr5_1:10590728-10590747 None:intergenic 30.0%
! TTCTTTTTACAGTGACAGAA+GGG + chr5_1:10590826-10590845 None:intergenic 30.0%
! TTTCTTTTTACAGTGACAGA+AGG + chr5_1:10590827-10590846 None:intergenic 30.0%
CACTGTAAAAAGAAAGTTGA+TGG - chr5_1:10590832-10590851 Msa0717030:three_prime_UTR 30.0%
ACGAATCATCGTAAAATTGA+GGG + chr5_1:10590867-10590886 None:intergenic 30.0%
TTGACAATCTCTTCAACTTT+GGG + chr5_1:10590892-10590911 None:intergenic 30.0%
CATAAAAAACCTTAACGATG+TGG - chr5_1:10591078-10591097 Msa0717030:CDS 30.0%
! ATTTTCTATTTGCATCCACA+AGG + chr5_1:10591136-10591155 None:intergenic 30.0%
GTGATCTATGAGTTGTATAT+TGG - chr5_1:10591180-10591199 Msa0717030:CDS 30.0%
!! ATGACAAAAGTTGATTTTGC+AGG - chr5_1:10591254-10591273 Msa0717030:CDS 30.0%
!! TGACAAAAGTTGATTTTGCA+GGG - chr5_1:10591255-10591274 Msa0717030:CDS 30.0%
!! CTTTTGATGGTCATTGATAA+GGG + chr5_1:10591503-10591522 None:intergenic 30.0%
!! ACTTTTGATGGTCATTGATA+AGG + chr5_1:10591504-10591523 None:intergenic 30.0%
AATATTCAATCCTTTCAGAC+TGG - chr5_1:10591538-10591557 Msa0717030:intron 30.0%
! TGGTTTGGAATGTATTGTTA+GGG + chr5_1:10591645-10591664 None:intergenic 30.0%
! ATGGTTTGGAATGTATTGTT+AGG + chr5_1:10591646-10591665 None:intergenic 30.0%
CAAGTATGTGTTGAAAACAA+TGG + chr5_1:10591755-10591774 None:intergenic 30.0%
GTTCATAGCTTATACCAATA+AGG + chr5_1:10592089-10592108 None:intergenic 30.0%
AATTAACCTGGATAGAACTT+AGG - chr5_1:10592235-10592254 Msa0717030:intron 30.0%
ATTAACCTGGATAGAACTTA+GGG - chr5_1:10592236-10592255 Msa0717030:intron 30.0%
TGTTTGTCATCATCAAAAAG+GGG - chr5_1:10592404-10592423 Msa0717030:intron 30.0%
GTTATCATCAAAACCCTTTA+AGG + chr5_1:10592464-10592483 None:intergenic 30.0%
!! AAAGGGTTTTGATGATAACA+AGG - chr5_1:10592465-10592484 Msa0717030:intron 30.0%
AATGAGCAAATAAAGAGCTA+TGG - chr5_1:10592572-10592591 Msa0717030:intron 30.0%
AAACACAAACAAAGGATTAG+TGG - chr5_1:10592922-10592941 Msa0717030:intron 30.0%
! CAATAATCTTTTGCCTGATT+TGG + chr5_1:10593171-10593190 None:intergenic 30.0%
CAAATCAGGCAAAAGATTAT+TGG - chr5_1:10593169-10593188 Msa0717030:intron 30.0%
TCTTTCACACCACTATATAA+AGG - chr5_1:10593247-10593266 Msa0717030:intron 30.0%
AACACTTGATATACAATCAG+AGG + chr5_1:10593452-10593471 None:intergenic 30.0%
TAATCAGAATCTAAATGCAG+CGG + chr5_1:10593793-10593812 None:intergenic 30.0%
ATATGAGACATGACTCTTAA+TGG - chr5_1:10594378-10594397 Msa0717030:intron 30.0%
TTTGTTTAATTATCTGCAGC+AGG - chr5_1:10594460-10594479 Msa0717030:intron 30.0%
CTTTGGATGAATATCTTGAT+TGG - chr5_1:10594483-10594502 Msa0717030:intron 30.0%
AAAAAGTGAATATTCGGCTA+AGG + chr5_1:10594534-10594553 None:intergenic 30.0%
!!! GATTTTTTCATGCTTAGTCA+TGG + chr5_1:10594670-10594689 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr5_1:10594837-10594856 None:intergenic 30.0%
TAGTGTGCTCAGTATTAATT+GGG - chr5_1:10594968-10594987 Msa0717030:intron 30.0%
TCCTATCACTAGTGTAATTA+GGG + chr5_1:10595369-10595388 None:intergenic 30.0%
! CCACTTATTCACTTTGAAAA+AGG + chr5_1:10595716-10595735 None:intergenic 30.0%
!!! CCTTTTTCAAAGTGAATAAG+TGG - chr5_1:10595713-10595732 Msa0717030:intron 30.0%
ACATACATTGATATATGCAG+GGG + chr5_1:10595762-10595781 None:intergenic 30.0%
GACATACATTGATATATGCA+GGG + chr5_1:10595763-10595782 None:intergenic 30.0%
CAAAAATATGGATACAACTC+TGG + chr5_1:10596151-10596170 None:intergenic 30.0%
!! GAGTTGTATCCATATTTTTG+CGG - chr5_1:10596151-10596170 Msa0717030:intron 30.0%
!! AGTTGTATCCATATTTTTGC+GGG - chr5_1:10596152-10596171 Msa0717030:intron 30.0%
ATTTATACCCCGCAAAAATA+TGG + chr5_1:10596163-10596182 None:intergenic 30.0%
! ATTGATGGTATATATGTCCT+TGG + chr5_1:10596480-10596499 None:intergenic 30.0%
TGCAAGTATATTTCGACAAA+AGG + chr5_1:10596587-10596606 None:intergenic 30.0%
GCAAAATTATACAGGGTTAA+TGG - chr5_1:10596604-10596623 Msa0717030:intron 30.0%
AACAAATTGAACTAAAGCCA+GGG + chr5_1:10596784-10596803 None:intergenic 30.0%
AAACAAATTGAACTAAAGCC+AGG + chr5_1:10596785-10596804 None:intergenic 30.0%
ATTATATTCCTTCAACCGTA+AGG - chr5_1:10597216-10597235 Msa0717030:intron 30.0%
ATATTAAACCTTACGGTTGA+AGG + chr5_1:10597227-10597246 None:intergenic 30.0%
!!! GGCCATTATTTGCATTTTTT+AGG + chr5_1:10597333-10597352 None:intergenic 30.0%
!! GACTTTGATGGATTTATACA+TGG - chr5_1:10597580-10597599 Msa0717030:intron 30.0%
!!! CATGAAAAGCCTTATTTTTG+TGG + chr5_1:10597608-10597627 None:intergenic 30.0%
ACTTATGGGCATAATTATGT+TGG - chr5_1:10597655-10597674 Msa0717030:intron 30.0%
TACTCTTGAAGAGACAAATT+AGG + chr5_1:10597681-10597700 None:intergenic 30.0%
!! AGAGTAACAAGGTTAGTTTA+AGG - chr5_1:10597695-10597714 Msa0717030:intron 30.0%
!! CATTTTCTAAAGAGGCAATT+AGG - chr5_1:10597797-10597816 Msa0717030:CDS 30.0%
! TAGTTGTTGTCGAATTTTAC+CGG + chr5_1:10598342-10598361 None:intergenic 30.0%
AAGAACTTATTGACCAACAA+GGG - chr5_1:10598366-10598385 Msa0717030:intron 30.0%
ACAGAATTTCATCAGAACTT+AGG + chr5_1:10598395-10598414 None:intergenic 30.0%
CCAATGGCTTCATAAAAAAA+TGG + chr5_1:10598654-10598673 None:intergenic 30.0%
!!! CCATTTTTTTATGAAGCCAT+TGG - chr5_1:10598651-10598670 Msa0717030:CDS 30.0%
TGTGTCCTGAGTATAAAATT+TGG - chr5_1:10598683-10598702 Msa0717030:exon 30.0%
GTGTCCTGAGTATAAAATTT+GGG - chr5_1:10598684-10598703 Msa0717030:exon 30.0%
! AAAGCCCAAATTTTATACTC+AGG + chr5_1:10598691-10598710 None:intergenic 30.0%
! GAGTATAAAATTTGGGCTTT+TGG - chr5_1:10598691-10598710 Msa0717030:exon 30.0%
AGACTAGAAGAGAAAAAAGC+AGG + chr5_1:10590798-10590817 None:intergenic 35.0%
CACGAATCATCGTAAAATTG+AGG + chr5_1:10590868-10590887 None:intergenic 35.0%
CTTGACAATCTCTTCAACTT+TGG + chr5_1:10590893-10590912 None:intergenic 35.0%
! TTTCCATGACTGTTTTGTCA+AGG - chr5_1:10590975-10590994 Msa0717030:CDS 35.0%
ATACCTTGACAAAACAGTCA+TGG + chr5_1:10590981-10591000 None:intergenic 35.0%
! TTTTATATATAACCGCGACG+AGG - chr5_1:10591048-10591067 Msa0717030:CDS 35.0%
ATAACAAGTGACTGCAATTG+TGG + chr5_1:10591104-10591123 None:intergenic 35.0%
ATGAGTTGTATATTGGGTGT+TGG - chr5_1:10591187-10591206 Msa0717030:CDS 35.0%
CAAATCCTCTAGCTGAATTA+CGG + chr5_1:10591347-10591366 None:intergenic 35.0%
GCATTAGAGTAGAAAACAAG+AGG + chr5_1:10591481-10591500 None:intergenic 35.0%
AGAGAATCTCTTCTTCCTAA+AGG + chr5_1:10591583-10591602 None:intergenic 35.0%
TTAGGAAGAAGAGATTCTCT+TGG - chr5_1:10591583-10591602 Msa0717030:intron 35.0%
! GGTTTGGAATGTATTGTTAG+GGG + chr5_1:10591644-10591663 None:intergenic 35.0%
TATAAGCTATGAACGAACGA+AGG - chr5_1:10592095-10592114 Msa0717030:intron 35.0%
TTAACCTGGATAGAACTTAG+GGG - chr5_1:10592237-10592256 Msa0717030:intron 35.0%
CTTAAAGACTATCAGACTCA+GGG - chr5_1:10592277-10592296 Msa0717030:intron 35.0%
TTAAAGACTATCAGACTCAG+GGG - chr5_1:10592278-10592297 Msa0717030:intron 35.0%
GTTTGTCATCATCAAAAAGG+GGG - chr5_1:10592405-10592424 Msa0717030:intron 35.0%
ATATTCAGCTTCTGGTGAAA+TGG + chr5_1:10592836-10592855 None:intergenic 35.0%
TCAATGCAAAAGCTGTCTAT+TGG - chr5_1:10592893-10592912 Msa0717030:intron 35.0%
GGATTCGAAAACACAAACAA+AGG - chr5_1:10592914-10592933 Msa0717030:intron 35.0%
!! GTCATTTCAAAGGTGTTTGA+AGG - chr5_1:10592956-10592975 Msa0717030:intron 35.0%
AAGAAAACAGCTCCAGAATA+CGG - chr5_1:10593078-10593097 Msa0717030:intron 35.0%
CATAGATGTTCCTTTGGATA+AGG - chr5_1:10593110-10593129 Msa0717030:intron 35.0%
ATGTTCCTTTGGATAAGGAA+TGG - chr5_1:10593115-10593134 Msa0717030:intron 35.0%
GAAATCCATTCCTTATCCAA+AGG + chr5_1:10593123-10593142 None:intergenic 35.0%
GTCTTCACTCCTTTATATAG+TGG + chr5_1:10593259-10593278 None:intergenic 35.0%
TCATGCATTACCAATTCTCT+AGG + chr5_1:10593281-10593300 None:intergenic 35.0%
CAAATCAGATACAGACTCAA+TGG + chr5_1:10593418-10593437 None:intergenic 35.0%
TTGATTGTGTTCTTGAGCAA+AGG - chr5_1:10593547-10593566 Msa0717030:intron 35.0%
TACTCATAGTGAAATCTCCT+TGG - chr5_1:10593671-10593690 Msa0717030:intron 35.0%
ACGACACAAAGCAATTATAC+TGG + chr5_1:10593739-10593758 None:intergenic 35.0%
! GATCAGTGTGTTCAGTTTTT+AGG - chr5_1:10593843-10593862 Msa0717030:intron 35.0%
AGGTGAGAAAAACACAAGAA+GGG + chr5_1:10593905-10593924 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG + chr5_1:10593906-10593925 None:intergenic 35.0%
! TAGGCTAAAGTGCATTTTGA+AGG + chr5_1:10593925-10593944 None:intergenic 35.0%
CTTATGAGATCATTGTGCTT+TGG - chr5_1:10594096-10594115 Msa0717030:intron 35.0%
TACACAAACTAAATCTCACG+AGG - chr5_1:10594194-10594213 Msa0717030:intron 35.0%
CATAAAAAATCACGAGCATG+AGG - chr5_1:10594263-10594282 Msa0717030:intron 35.0%
ACATGACTCTTAATGGAGAA+TGG - chr5_1:10594385-10594404 Msa0717030:intron 35.0%
GTAGTGTGCTCAGTATTAAT+TGG - chr5_1:10594967-10594986 Msa0717030:intron 35.0%
AGTGTGCTCAGTATTAATTG+GGG - chr5_1:10594969-10594988 Msa0717030:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr5_1:10595071-10595090 Msa0717030:intron 35.0%
ATTGTGTAAACGGAATCGAT+GGG + chr5_1:10595195-10595214 None:intergenic 35.0%
CTCGTGAATTAGACAAAGAA+GGG + chr5_1:10595290-10595309 None:intergenic 35.0%
TCTCGTGAATTAGACAAAGA+AGG + chr5_1:10595291-10595310 None:intergenic 35.0%
TCCCTAATTACACTAGTGAT+AGG - chr5_1:10595365-10595384 Msa0717030:intron 35.0%
CTCCTATCACTAGTGTAATT+AGG + chr5_1:10595370-10595389 None:intergenic 35.0%
GGACATACATTGATATATGC+AGG + chr5_1:10595764-10595783 None:intergenic 35.0%
TGAGCATAACTCAATTGTCA+GGG + chr5_1:10595785-10595804 None:intergenic 35.0%
!! TGTCGGTTTAAGAACTTTGT+TGG + chr5_1:10596127-10596146 None:intergenic 35.0%
!! GTTGTATCCATATTTTTGCG+GGG - chr5_1:10596153-10596172 Msa0717030:intron 35.0%
CAACATATTTAACGGCGTAA+AGG - chr5_1:10596299-10596318 Msa0717030:intron 35.0%
ATATTTAACGGCGTAAAGGA+CGG - chr5_1:10596303-10596322 Msa0717030:intron 35.0%
!!! ATTGGAATTTTGAAGCTGAG+AGG - chr5_1:10596332-10596351 Msa0717030:intron 35.0%
TTTCATCAGAATAAAGTGGG+TGG + chr5_1:10596693-10596712 None:intergenic 35.0%
ACAAATTGAACTAAAGCCAG+GGG + chr5_1:10596783-10596802 None:intergenic 35.0%
AACACATACTCTTATGTAGC+AGG + chr5_1:10597103-10597122 None:intergenic 35.0%
ATTTGTATTTGTAAACCCCC+AGG - chr5_1:10597127-10597146 Msa0717030:intron 35.0%
! CCAATTCTCTCTTTTTCTCA+AGG + chr5_1:10597159-10597178 None:intergenic 35.0%
CCTTGAGAAAAAGAGAGAAT+TGG - chr5_1:10597156-10597175 Msa0717030:intron 35.0%
ACTAGCATCATCAAAAGCTT+GGG + chr5_1:10597358-10597377 None:intergenic 35.0%
!! TTTGATGATGCTAGTGGATT+AGG - chr5_1:10597363-10597382 Msa0717030:intron 35.0%
!! AATCAACATGATGGACCAAA+AGG + chr5_1:10597501-10597520 None:intergenic 35.0%
AACTGAATTGATCTCTTTGG+CGG - chr5_1:10597557-10597576 Msa0717030:intron 35.0%
AAAGTCACCTATGACTTTGT+GGG + chr5_1:10597634-10597653 None:intergenic 35.0%
! TCATAGGTGACTTTGACTTA+TGG - chr5_1:10597640-10597659 Msa0717030:intron 35.0%
! CATAGGTGACTTTGACTTAT+GGG - chr5_1:10597641-10597660 Msa0717030:intron 35.0%
TTGTCTCTTCAAGAGTAACA+AGG - chr5_1:10597684-10597703 Msa0717030:intron 35.0%
! GTTTTATGAGCTAACACTAG+TGG - chr5_1:10597750-10597769 Msa0717030:intron 35.0%
AAAGACTCTACAACCAAACT+GGG - chr5_1:10598208-10598227 Msa0717030:intron 35.0%
!! AGTCTAGGACAAACAGATTT+TGG + chr5_1:10598311-10598330 None:intergenic 35.0%
CAAGAACTTATTGACCAACA+AGG - chr5_1:10598365-10598384 Msa0717030:intron 35.0%
GGAAACATTACTCCTTTAAC+AGG - chr5_1:10598510-10598529 Msa0717030:CDS 35.0%
TTACTCCTTTAACAGGATCA+AGG - chr5_1:10598517-10598536 Msa0717030:CDS 35.0%
TACTCCTTTAACAGGATCAA+GGG - chr5_1:10598518-10598537 Msa0717030:CDS 35.0%
! ACTGGATTGGATGAATACCA+TGG + chr5_1:10590710-10590729 None:intergenic 40.0%
CATCGTAAAATTGAGGGTAG+AGG + chr5_1:10590861-10590880 None:intergenic 40.0%
ATGGAAATGTAGTCTCAGCA+AGG + chr5_1:10590962-10590981 None:intergenic 40.0%
GAACAATCATCAGCGAAAAG+AGG - chr5_1:10591310-10591329 Msa0717030:intron 40.0%
ATTCAATCCTTTCAGACTGG+TGG - chr5_1:10591541-10591560 Msa0717030:intron 40.0%
GTTGATCTAGTTGCTCTATC+TGG - chr5_1:10591700-10591719 Msa0717030:intron 40.0%
TAACCTGGATAGAACTTAGG+GGG - chr5_1:10592238-10592257 Msa0717030:intron 40.0%
!! GTCTGATAGTCTTTAAGGTG+AGG + chr5_1:10592274-10592293 None:intergenic 40.0%
CCTGAGTCTGATAGTCTTTA+AGG + chr5_1:10592279-10592298 None:intergenic 40.0%
CCTTAAAGACTATCAGACTC+AGG - chr5_1:10592276-10592295 Msa0717030:intron 40.0%
TAAAGACTATCAGACTCAGG+GGG - chr5_1:10592279-10592298 Msa0717030:intron 40.0%
GTTTGTAAGCTCAGAATCTG+AGG + chr5_1:10592321-10592340 None:intergenic 40.0%
ATCAAAAAGGGGGAGATTGT+TGG - chr5_1:10592415-10592434 Msa0717030:intron 40.0%
!! CTTCAGAAGCACTATTCTTC+AGG + chr5_1:10592713-10592732 None:intergenic 40.0%
! ATAGTGCTTCTGAAGACAAG+AGG - chr5_1:10592718-10592737 Msa0717030:intron 40.0%
ACCAGAAGCTGAATATCAAC+TGG - chr5_1:10592840-10592859 Msa0717030:intron 40.0%
! TCCAGTTGATATTCAGCTTC+TGG + chr5_1:10592844-10592863 None:intergenic 40.0%
! AGGATTAGTGGAGTTTGCAA+CGG - chr5_1:10592934-10592953 Msa0717030:intron 40.0%
GTTTGCAACGGTCATTTCAA+AGG - chr5_1:10592946-10592965 Msa0717030:intron 40.0%
ATCCAAAGGAACATCTATGC+AGG + chr5_1:10593109-10593128 None:intergenic 40.0%
AAGCTTCAACAACGACTCTT+TGG - chr5_1:10593201-10593220 Msa0717030:intron 40.0%
GAACAATTTCAGCAGAGGTT+TGG + chr5_1:10593341-10593360 None:intergenic 40.0%
ATGCAGAACAATTTCAGCAG+AGG + chr5_1:10593346-10593365 None:intergenic 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG - chr5_1:10593682-10593701 Msa0717030:intron 40.0%
TGAGAAAAACACAAGAAGGG+GGG + chr5_1:10593902-10593921 None:intergenic 40.0%
GTGAGAAAAACACAAGAAGG+GGG + chr5_1:10593903-10593922 None:intergenic 40.0%
GGTGAGAAAAACACAAGAAG+GGG + chr5_1:10593904-10593923 None:intergenic 40.0%
! TGGCTCAAGTTGTTAGTACA+CGG - chr5_1:10594116-10594135 Msa0717030:intron 40.0%
TAATTATCTGCAGCAGGCTT+TGG - chr5_1:10594466-10594485 Msa0717030:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr5_1:10595075-10595094 None:intergenic 40.0%
GTGTGCTCAGTATTAATTGG+GGG - chr5_1:10594970-10594989 Msa0717030:intron 40.0%
TGTGCTCAGTATTAATTGGG+GGG - chr5_1:10594971-10594990 Msa0717030:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr5_1:10595075-10595094 Msa0717030:intron 40.0%
TCCAAATGACAGCCAAAACA+TGG + chr5_1:10595167-10595186 None:intergenic 40.0%
CATTGTGTAAACGGAATCGA+TGG + chr5_1:10595196-10595215 None:intergenic 40.0%
AGAAGGGTTAGAGAAAGCTA+AGG + chr5_1:10595274-10595293 None:intergenic 40.0%
GTGAGCATAACTCAATTGTC+AGG + chr5_1:10595786-10595805 None:intergenic 40.0%
ACAATTGAGTTATGCTCACG+TGG - chr5_1:10595787-10595806 Msa0717030:intron 40.0%
ATGGATACAACTCTGGTTGT+CGG + chr5_1:10596144-10596163 None:intergenic 40.0%
!!! CCAGGTTTTGTTTGATCGAT+CGG + chr5_1:10596196-10596215 None:intergenic 40.0%
CTAAAGTAGTCAGTCAAACC+AGG + chr5_1:10596214-10596233 None:intergenic 40.0%
!!! GAATTTTGAAGCTGAGAGGA+TGG - chr5_1:10596336-10596355 Msa0717030:intron 40.0%
ATCACAAAACAAAGGGAGTG+TGG + chr5_1:10596376-10596395 None:intergenic 40.0%
GGATTATGTAGCTCCAATTG+AGG - chr5_1:10596824-10596843 Msa0717030:intron 40.0%
CAACTGCAAAGACACCAAAA+CGG - chr5_1:10596953-10596972 Msa0717030:intron 40.0%
! CCTATGCTTATAGACCGTTT+TGG + chr5_1:10596970-10596989 None:intergenic 40.0%
CCAAAACGGTCTATAAGCAT+AGG - chr5_1:10596967-10596986 Msa0717030:intron 40.0%
! TTTTCTCAAGGCACATTCCT+GGG + chr5_1:10597147-10597166 None:intergenic 40.0%
! TTTTTCTCAAGGCACATTCC+TGG + chr5_1:10597148-10597167 None:intergenic 40.0%
! AGATCTAAGAGCGTGCAAAA+TGG + chr5_1:10597190-10597209 None:intergenic 40.0%
CACTATGCAGTTACTAGTCA+CGG - chr5_1:10597288-10597307 Msa0717030:intron 40.0%
TTACTAGTCACGGTACACTA+TGG - chr5_1:10597298-10597317 Msa0717030:intron 40.0%
CACTAGCATCATCAAAAGCT+TGG + chr5_1:10597359-10597378 None:intergenic 40.0%
!!! CAAGCTTTTGATGATGCTAG+TGG - chr5_1:10597357-10597376 Msa0717030:intron 40.0%
ACTGAATTGATCTCTTTGGC+GGG - chr5_1:10597558-10597577 Msa0717030:intron 40.0%
TACATGGCGCCACAAAAATA+AGG - chr5_1:10597596-10597615 Msa0717030:intron 40.0%
CATGTTTCCCACAAAGTCAT+AGG - chr5_1:10597624-10597643 Msa0717030:intron 40.0%
CAAAGTCACCTATGACTTTG+TGG + chr5_1:10597635-10597654 None:intergenic 40.0%
CTGCAACACAATCTATATCG+CGG + chr5_1:10598022-10598041 None:intergenic 40.0%
TTATGCCACTGATGCAACTA+CGG + chr5_1:10598124-10598143 None:intergenic 40.0%
! GTAGAGTCTTTGTCTAAAGC+TGG + chr5_1:10598199-10598218 None:intergenic 40.0%
CAAAGACTCTACAACCAAAC+TGG - chr5_1:10598207-10598226 Msa0717030:intron 40.0%
! GCAATTGAGCTGCATAGTTT+TGG + chr5_1:10598260-10598279 None:intergenic 40.0%
TGAACAATTTGCCAAGTCCA+TGG - chr5_1:10598479-10598498 Msa0717030:CDS 40.0%
AATGTTTCCCATCTTCACCA+TGG + chr5_1:10598499-10598518 None:intergenic 40.0%
ACTCCTTTAACAGGATCAAG+GGG - chr5_1:10598519-10598538 Msa0717030:CDS 40.0%
AATCAGAAAACGCTGCAGAA+AGG - chr5_1:10598545-10598564 Msa0717030:CDS 40.0%
GGATTGGATGAATACCATGG+TGG + chr5_1:10590707-10590726 None:intergenic 45.0%
TGTCAAGTCCGTAGTTGCTA+AGG - chr5_1:10590906-10590925 Msa0717030:CDS 45.0%
CAATTGTGGCCACATCGTTA+AGG + chr5_1:10591090-10591109 None:intergenic 45.0%
! TCAGTGTTGCTAGATAGCAG+TGG - chr5_1:10591288-10591307 Msa0717030:intron 45.0%
CCTCTAGCTGAATTACGGTT+TGG + chr5_1:10591342-10591361 None:intergenic 45.0%
CCAAACCGTAATTCAGCTAG+AGG - chr5_1:10591339-10591358 Msa0717030:intron 45.0%
ATCAGCACAAGAGACTGTCT+GGG + chr5_1:10591412-10591431 None:intergenic 45.0%
TATCAGCACAAGAGACTGTC+TGG + chr5_1:10591413-10591432 None:intergenic 45.0%
! CCTAAAGGTACATCCCAACT+TGG + chr5_1:10591568-10591587 None:intergenic 45.0%
! CCAAGTTGGGATGTACCTTT+AGG - chr5_1:10591565-10591584 Msa0717030:intron 45.0%
! TCTCTTGGTGCAAGCATAAG+TGG - chr5_1:10591598-10591617 Msa0717030:intron 45.0%
TGGAATGTATTGTTAGGGGC+AGG + chr5_1:10591640-10591659 None:intergenic 45.0%
!! AAGTTGACTTTGGGGTTCTG+AGG + chr5_1:10592343-10592362 None:intergenic 45.0%
TTCAGTAGCAAGTTGCCTTC+AGG + chr5_1:10592627-10592646 None:intergenic 45.0%
!! TTCAGGAGCGCTATTTCTTC+AGG + chr5_1:10592680-10592699 None:intergenic 45.0%
TGGTGAAATGGCTTCTGATG+AGG + chr5_1:10592824-10592843 None:intergenic 45.0%
! GAAGGCGTGTGTTTGCAATT+TGG - chr5_1:10592974-10592993 Msa0717030:intron 45.0%
! AAACAGAGTAGTGGAGAACG+TGG + chr5_1:10593039-10593058 None:intergenic 45.0%
! TGTTTTCTTGTCCTGTAGCG+CGG + chr5_1:10593067-10593086 None:intergenic 45.0%
CATAGGACAACAGCCAAATC+AGG - chr5_1:10593155-10593174 Msa0717030:intron 45.0%
GGAGTGAAGACCTAGAGAAT+TGG - chr5_1:10593268-10593287 Msa0717030:intron 45.0%
TTGCTTGTGTGCTTGAGCAT+TGG - chr5_1:10593577-10593596 Msa0717030:intron 45.0%
TTGCTTGTGTGCTTGAGCAT+TGG - chr5_1:10593577-10593596 Msa0717030:intron 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG - chr5_1:10593681-10593700 Msa0717030:intron 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG - chr5_1:10593683-10593702 Msa0717030:intron 45.0%
!! TACTGGTTCCTTCCACAATC+CGG + chr5_1:10593722-10593741 None:intergenic 45.0%
! TGTGCTGCTCAATCAGACAA+AGG - chr5_1:10594698-10594717 Msa0717030:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr5_1:10595074-10595093 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr5_1:10595074-10595093 Msa0717030:intron 45.0%
TTCATCGGGACTTCATCTTC+CGG + chr5_1:10595133-10595152 None:intergenic 45.0%
!!! GCCATGTTTTGGCTGTCATT+TGG - chr5_1:10595163-10595182 Msa0717030:intron 45.0%
GGGTTAGAGAAAGCTAAGGT+AGG + chr5_1:10595270-10595289 None:intergenic 45.0%
CCGATCGATCAAACAAAACC+TGG - chr5_1:10596193-10596212 Msa0717030:intron 45.0%
!! TCTCAGAAGCATTGACACCA+AGG - chr5_1:10596460-10596479 Msa0717030:intron 45.0%
AGAGGGTGGAGCCATATTTA+TGG + chr5_1:10596651-10596670 None:intergenic 45.0%
TTTCTCAAGGCACATTCCTG+GGG + chr5_1:10597146-10597165 None:intergenic 45.0%
TTTGCACGCTCTTAGATCTG+TGG - chr5_1:10597191-10597210 Msa0717030:intron 45.0%
CGTGACTAGTAACTGCATAG+TGG + chr5_1:10597290-10597309 None:intergenic 45.0%
TCACGGTACACTATGGAGTT+TGG - chr5_1:10597305-10597324 Msa0717030:intron 45.0%
AGGAACGCGAATCAACATGA+TGG + chr5_1:10597510-10597529 None:intergenic 45.0%
TTCTTCCGTAGTTGCATCAG+TGG - chr5_1:10598116-10598135 Msa0717030:CDS 45.0%
GTTATAGGTAGCCACACCAT+AGG - chr5_1:10598159-10598178 Msa0717030:CDS 45.0%
CTCTACAACCAAACTGGGAA+TGG - chr5_1:10598213-10598232 Msa0717030:intron 45.0%
TTTGGTCTCCACCAGATCTT+GGG + chr5_1:10598293-10598312 None:intergenic 45.0%
! TTTTGGTCTCCACCAGATCT+TGG + chr5_1:10598294-10598313 None:intergenic 45.0%
TGTCCTAGACTTTGTCACAC+CGG - chr5_1:10598320-10598339 Msa0717030:intron 45.0%
TTACCGGTGTGACAAAGTCT+AGG + chr5_1:10598326-10598345 None:intergenic 45.0%
AGAACTTAGGAGACCCTTGT+TGG + chr5_1:10598382-10598401 None:intergenic 45.0%
TCACCCCTTGATCCTGTTAA+AGG + chr5_1:10598525-10598544 None:intergenic 45.0%
!! AAAAAAAAATTGAAATATAT+AGG + chr5_1:10591966-10591985 None:intergenic 5.0%
AGCGACAGCCTTAGCAACTA+CGG + chr5_1:10590917-10590936 None:intergenic 50.0%
TTATGTGTCTGACCTCGTCG+CGG + chr5_1:10591063-10591082 None:intergenic 50.0%
GGGACACTCTTTCTCTACAG+CGG + chr5_1:10591391-10591410 None:intergenic 50.0%
TCAGCACAAGAGACTGTCTG+GGG + chr5_1:10591411-10591430 None:intergenic 50.0%
ACTTGGTCCACCAGTCTGAA+AGG + chr5_1:10591551-10591570 None:intergenic 50.0%
! TTCAGACTGGTGGACCAAGT+TGG - chr5_1:10591551-10591570 Msa0717030:intron 50.0%
! TCAGACTGGTGGACCAAGTT+GGG - chr5_1:10591552-10591571 Msa0717030:intron 50.0%
!! AAGGCTCTGAGCCCCATTAA+TGG - chr5_1:10592025-10592044 Msa0717030:intron 50.0%
TTCAGGAGCAGCTTGACTTC+AGG + chr5_1:10592663-10592682 None:intergenic 50.0%
CTTCAGGAGCAGCTTACTTC+AGG + chr5_1:10592697-10592716 None:intergenic 50.0%
! GCTTCTGATGATGTGGCTTC+TGG + chr5_1:10592745-10592764 None:intergenic 50.0%
! TGACGCAGCTTCTGATGATG+TGG + chr5_1:10592752-10592771 None:intergenic 50.0%
GCGGACACAAAACAGAGTAG+TGG + chr5_1:10593048-10593067 None:intergenic 50.0%
ATGCAGGCGAAACCGTATTC+TGG + chr5_1:10593093-10593112 None:intergenic 50.0%
CGCCTGCATAGATGTTCCTT+TGG - chr5_1:10593104-10593123 Msa0717030:intron 50.0%
! ACAACGACTCTTTGGTGTGC+TGG - chr5_1:10593209-10593228 Msa0717030:intron 50.0%
TCTTGCAGTTGTGCTTGAGC+AGG - chr5_1:10593517-10593536 Msa0717030:intron 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG - chr5_1:10593684-10593703 Msa0717030:intron 50.0%
ACTGGACTACTTCCGGATTG+TGG - chr5_1:10593707-10593726 Msa0717030:intron 50.0%
GACTACTTCCGGATTGTGGA+AGG - chr5_1:10593711-10593730 Msa0717030:intron 50.0%
TCGCACTCTTTCATTCCACG+AGG - chr5_1:10594425-10594444 Msa0717030:intron 50.0%
CGCACTCTTTCATTCCACGA+GGG - chr5_1:10594426-10594445 Msa0717030:intron 50.0%
GCACTCTTTCATTCCACGAG+GGG - chr5_1:10594427-10594446 Msa0717030:intron 50.0%
CACTCTTTCATTCCACGAGG+GGG - chr5_1:10594428-10594447 Msa0717030:intron 50.0%
TCATCGGGACTTCATCTTCC+GGG + chr5_1:10595132-10595151 None:intergenic 50.0%
ATGGCCATGTGGGACTTCAT+CGG + chr5_1:10595148-10595167 None:intergenic 50.0%
! AGTCCCACATGGCCATGTTT+TGG - chr5_1:10595152-10595171 Msa0717030:intron 50.0%
CAGCCAAAACATGGCCATGT+GGG + chr5_1:10595158-10595177 None:intergenic 50.0%
ACAGCCAAAACATGGCCATG+TGG + chr5_1:10595159-10595178 None:intergenic 50.0%
ATTGATATATGCAGGGGCCG+AGG + chr5_1:10595756-10595775 None:intergenic 50.0%
TTAACGGCGTAAAGGACGGA+TGG - chr5_1:10596307-10596326 Msa0717030:intron 50.0%
CGTAAAGGACGGATGGAGAT+TGG - chr5_1:10596314-10596333 Msa0717030:intron 50.0%
TGAAGCTGAGAGGATGGAAG+TGG - chr5_1:10596342-10596361 Msa0717030:intron 50.0%
GAAGCTGAGAGGATGGAAGT+GGG - chr5_1:10596343-10596362 Msa0717030:intron 50.0%
AAGCTGAGAGGATGGAAGTG+GGG - chr5_1:10596344-10596363 Msa0717030:intron 50.0%
GAACTAAAGCCAGGGGCTAT+GGG + chr5_1:10596776-10596795 None:intergenic 50.0%
TGAACTAAAGCCAGGGGCTA+TGG + chr5_1:10596777-10596796 None:intergenic 50.0%
TTCTCAAGGCACATTCCTGG+GGG + chr5_1:10597145-10597164 None:intergenic 50.0%
GCATCATCAAAAGCTTGGGC+TGG + chr5_1:10597354-10597373 None:intergenic 50.0%
TCTCTTTGGCGGGACTTTGA+TGG - chr5_1:10597568-10597587 Msa0717030:intron 50.0%
! CTGACTTGCCATTCCCAGTT+TGG + chr5_1:10598224-10598243 None:intergenic 50.0%
ATGCAGCTCAATTGCGCACT+CGG - chr5_1:10598265-10598284 Msa0717030:intron 50.0%
TGCCAAGTCCATGGTGAAGA+TGG - chr5_1:10598488-10598507 Msa0717030:CDS 50.0%
GCCAAGTCCATGGTGAAGAT+GGG - chr5_1:10598489-10598508 Msa0717030:CDS 50.0%
TCCCATCTTCACCATGGACT+TGG + chr5_1:10598493-10598512 None:intergenic 50.0%
TGTCGCTAAAGAACCCCGCA+TGG - chr5_1:10590930-10590949 Msa0717030:CDS 55.0%
TCAGCAAGGAAGCAGCCATG+CGG + chr5_1:10590948-10590967 None:intergenic 55.0%
GCTCCCCCTAAGTTCTATCC+AGG + chr5_1:10592244-10592263 None:intergenic 55.0%
TGAAGCTTGGACGCTCCTGA+AGG - chr5_1:10592609-10592628 Msa0717030:intron 55.0%
! CTGTTTTGTGTCCGCGCTAC+AGG - chr5_1:10593053-10593072 Msa0717030:intron 55.0%
AAGGGGGACTGGACTACTTC+CGG - chr5_1:10593700-10593719 Msa0717030:intron 55.0%
AAAAAAGGTCAGCCCCCTCG+TGG + chr5_1:10594443-10594462 None:intergenic 55.0%
AGTCCCGATGAAGTCCCACA+TGG - chr5_1:10595141-10595160 Msa0717030:intron 55.0%
TGGCCATGTGGGACTTCATC+GGG + chr5_1:10595147-10595166 None:intergenic 55.0%
! GTGAATAAGTGGGGTGTCCG+AGG - chr5_1:10595724-10595743 Msa0717030:intron 55.0%
TTGAATGCTCCCATAGCCCC+TGG - chr5_1:10596764-10596783 Msa0717030:intron 55.0%
GCCACACCATAGGAGATTCG+CGG - chr5_1:10598169-10598188 Msa0717030:CDS 55.0%
ACCGCGAATCTCCTATGGTG+TGG + chr5_1:10598173-10598192 None:intergenic 55.0%
GGACACAGCGACTATGCCAA+TGG + chr5_1:10598670-10598689 None:intergenic 55.0%
AGCAAGGAAGCAGCCATGCG+GGG + chr5_1:10590946-10590965 None:intergenic 60.0%
CAGCAAGGAAGCAGCCATGC+GGG + chr5_1:10590947-10590966 None:intergenic 60.0%
CAGTCCCCCTTGCACTTCCA+AGG + chr5_1:10593691-10593710 None:intergenic 60.0%
! CTTGGAAGTGCAAGGGGGAC+TGG - chr5_1:10593689-10593708 Msa0717030:intron 60.0%
GGTGTCCGAGGTTCGAACCT+CGG - chr5_1:10595736-10595755 Msa0717030:intron 60.0%
GGTGCACCGCGAATCTCCTA+TGG + chr5_1:10598178-10598197 None:intergenic 60.0%
!! ACTCGGTGCCCAAGATCTGG+TGG - chr5_1:10598282-10598301 Msa0717030:intron 60.0%
AGGGGCCGAGGTTCGAACCT+CGG + chr5_1:10595744-10595763 None:intergenic 65.0%
!! CGCACTCGGTGCCCAAGATC+TGG - chr5_1:10598279-10598298 Msa0717030:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 10590657 10598815 10590657 ID=Msa0717030;Name=Msa0717030
chr5_1 mRNA 10590657 10598815 10590657 ID=Msa0717030-mRNA-1;Parent=Msa0717030;Name=Msa0717030-mRNA-1;_AED=0.08;_eAED=0.08;_QI=115|1|1|1|1|1|4|237|331
chr5_1 exon 10590657 10591306 10590657 ID=Msa0717030-mRNA-1:exon:4362;Parent=Msa0717030-mRNA-1
chr5_1 exon 10597751 10597916 10597751 ID=Msa0717030-mRNA-1:exon:4361;Parent=Msa0717030-mRNA-1
chr5_1 exon 10598005 10598196 10598005 ID=Msa0717030-mRNA-1:exon:4360;Parent=Msa0717030-mRNA-1
chr5_1 exon 10598476 10598815 10598476 ID=Msa0717030-mRNA-1:exon:4359;Parent=Msa0717030-mRNA-1
chr5_1 five_prime_UTR 10598701 10598815 10598701 ID=Msa0717030-mRNA-1:five_prime_utr;Parent=Msa0717030-mRNA-1
chr5_1 CDS 10598476 10598700 10598476 ID=Msa0717030-mRNA-1:cds;Parent=Msa0717030-mRNA-1
chr5_1 CDS 10598005 10598196 10598005 ID=Msa0717030-mRNA-1:cds;Parent=Msa0717030-mRNA-1
chr5_1 CDS 10597751 10597916 10597751 ID=Msa0717030-mRNA-1:cds;Parent=Msa0717030-mRNA-1
chr5_1 CDS 10590894 10591306 10590894 ID=Msa0717030-mRNA-1:cds;Parent=Msa0717030-mRNA-1
chr5_1 three_prime_UTR 10590657 10590893 10590657 ID=Msa0717030-mRNA-1:three_prime_utr;Parent=Msa0717030-mRNA-1
Gene Sequence

>Msa0717030

ATGGTCAATTCTATAAACTTTCTCCTGCTTTTTTCTCTTCTAGTCTTTGCTCCCTTCTGTCACTGTAAAAAGAAAGTTGATGGTTACCTCTACCCTCAATTTTACGATGATTCGTGTCCCAAAGTTGAAGAGATTGTCAAGTCCGTAGTTGCTAAGGCTGTCGCTAAAGAACCCCGCATGGCTGCTTCCTTGCTGAGACTACATTTCCATGACTGTTTTGTCAAGGGTTGTGATGCATCAGTGTTGCTAGATAGCAGTGGAACAATCATCAGCGAAAAGAGGTCAAATCCAAACCGTAATTCAGCTAGAGGATTTGAAGTCATTGAAGAAATTAAATCCGCTGTAGAGAAAGAGTGTCCCCAGACAGTCTCTTGTGCTGATATTTTGACTCTAGCTGCTAGAGATTCAACTGTTCTTACTGGTGGACCAAGTTGGGATGTACCTTTAGGAAGAAGAGATTCTCTTGGTGCAAGCATAAGTGGCTCAAACAACAACATTCCTGCCCCTAACAATACATTCCAAACCATCTTAACTAAATTCAAGCTTAAGGGACTTAACATTGTTGATCTAGTTGCTCTATCTGGTAGCCACACCATAGGAGATTCGCGGTGCACCAGCTTTAGACAAAGACTCTACAACCAAACTGGGAATGGCAAGTCAGATTTCACTCTTGACCAAAACTATGCAGCTCAATTGCGCACTCGGTGCCCAAGATCTGGTGGAGACCAAAATCTGTTTGTCCTAGACTTTGTCACACCGGTAAAATTCGACAACAACTACTACAAGAACTTATTGACCAACAAGGGTCTCCTAAGTTCTGATGAAATTCTGTTGACAAAGAATCAAGTATCTGCAGATTTAGTGAAAAAGTATGCAGAAAGCAATGATCTTTTCTTTGAACAATTTGCCAAGTCCATGGTGAAGATGGGAAACATTACTCCTTTAACAGGATCAAGGGGTGAAATCAGAAAACGCTGCAGAAAGGTTAACAACTGA
Protein sequence

>Msa0717030

MVNSINFLLLFSLLVFAPFCHCKKKVDGYLYPQFYDDSCPKVEEIVKSVVAKAVAKEPRMAASLLRLHFHDCFVKGCDASVLLDSSGTIISEKRSNPNRNSARGFEVIEEIKSAVEKECPQTVSCADILTLAARDSTVLTGGPSWDVPLGRRDSLGASISGSNNNIPAPNNTFQTILTKFKLKGLNIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKSDFTLDQNYAAQLRTRCPRSGGDQNLFVLDFVTPVKFDNNYYKNLLTNKGLLSSDEILLTKNQVSADLVKKYAESNDLFFEQFAKSMVKMGNITPLTGSRGEIRKRCRKVNN*