AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0801920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0801920 MtrunA17_Chr5g0405571 98.892 361 4 0 1 361 1 361 0.0 739
Msa0801920 MtrunA17_Chr2g0292421 44.241 382 182 7 3 361 5 378 7.25e-100 300
Msa0801920 MtrunA17_Chr3g0132841 30.357 224 136 12 140 354 470 682 1.89e-15 77.8
Msa0801920 MtrunA17_Chr4g0072351 28.230 209 131 11 140 340 479 676 2.35e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0801920 AT5G66190.1 82.967 364 55 3 1 361 1 360 0.0 590
Msa0801920 AT1G20020.1 75.881 369 81 3 1 361 1 369 0.0 589
Msa0801920 AT1G20020.3 75.610 369 82 3 1 361 1 369 0.0 587
Msa0801920 AT1G20020.2 87.059 255 33 0 107 361 1 255 6.14e-174 484
Msa0801920 AT5G66190.2 89.370 254 27 0 108 361 9 262 2.38e-166 465
Msa0801920 AT4G05390.1 46.505 329 168 4 40 361 51 378 6.35e-100 301
Msa0801920 AT4G05390.2 50.853 293 136 4 76 361 59 350 1.02e-99 299
Msa0801920 AT1G30510.2 43.832 381 190 7 2 361 5 382 1.21e-99 300
Msa0801920 AT1G30510.1 43.583 374 196 5 2 361 9 381 1.46e-99 300
Msa0801920 AT1G30510.3 48.101 316 156 4 53 361 3 317 3.56e-99 296
Msa0801920 AT4G24520.1 28.571 224 140 12 140 354 470 682 7.19e-15 76.3
Msa0801920 AT4G24520.2 28.571 224 140 12 140 354 466 678 7.37e-15 76.3

Find 123 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTACAACCCTTGTAATTT+TGG 0.126679 5_3:+16082882 Msa0801920:three_prime_UTR
AGCAGTGCTCTTGGTGATTT+TGG 0.159118 5_3:+16080867 Msa0801920:CDS
TGCAGCAGCCATGTTGTTAT+TGG 0.219869 5_3:-16079700 None:intergenic
TGGTTTGGCATGGCTCTTCT+TGG 0.262373 5_3:+16082141 Msa0801920:CDS
TTGAATAATGTTTCCATTAG+TGG 0.264637 5_3:+16080021 Msa0801920:CDS
CAAAACCCCTTAGGCTAAAA+TGG 0.269657 5_3:+16079470 Msa0801920:five_prime_UTR
CTTCCAATGTATGGTGTCTT+TGG 0.276021 5_3:-16080150 None:intergenic
TTCTGCGTATTGTGCCATTC+TGG 0.290367 5_3:-16082403 None:intergenic
GAATATTCACAATCAAATTC+AGG 0.297816 5_3:-16083012 None:intergenic
AGAGAAGTGGAGTTGGAGTA+TGG 0.297934 5_3:-16079744 None:intergenic
TTAATAAAGACTCACAGTTT+TGG 0.301523 5_3:-16080895 None:intergenic
CTCTAACTCGGACCAAAGTT+TGG 0.313854 5_3:+16083193 Msa0801920:three_prime_UTR
GACTGTTAACCTTCCACTAA+TGG 0.338400 5_3:-16080034 None:intergenic
CTGCAGTTGGGAACTGGTAC+TGG 0.341094 5_3:+16081772 Msa0801920:intron
AAGCAGCTCACTGCTTTATA+AGG 0.342576 5_3:+16082174 Msa0801920:CDS
AGAAAGCACCTGAGAACTTC+AGG 0.359267 5_3:+16082319 Msa0801920:CDS
TATTCAGGCGACTTGAAGCC+TGG 0.381421 5_3:+16081562 Msa0801920:intron
ATATTTGTAGTTCAATGGTT+TGG 0.384817 5_3:+16082126 Msa0801920:intron
AGAAAAGATATCAAAGAAAC+AGG 0.385941 5_3:+16080098 Msa0801920:CDS
AGATAGACTTGTCTTCAAAA+AGG 0.389421 5_3:+16079794 Msa0801920:CDS
CATAATATCGACCACTTCTC+TGG 0.390696 5_3:+16079542 Msa0801920:five_prime_UTR
GGATCTGAAGTACAGATTAC+TGG 0.391458 5_3:+16081583 Msa0801920:CDS
TACAGAGAAGGACAATCAAT+TGG 0.392978 5_3:+16080780 Msa0801920:CDS
CGTATTGTGCCATTCTGGTT+TGG 0.393872 5_3:-16082398 None:intergenic
ACGGTGGCATTAGGATCTTT+TGG 0.394188 5_3:-16081631 None:intergenic
CCATTCTTGTCAATACCATC+TGG 0.394699 5_3:-16080810 None:intergenic
ATAAGCATTTCTTTACCAAC+TGG 0.399545 5_3:-16081607 None:intergenic
TACTAGGGATGAGGCAGATT+GGG 0.405130 5_3:+16083155 Msa0801920:three_prime_UTR
GGTTTGGCATGGCTCTTCTT+GGG 0.411064 5_3:+16082142 Msa0801920:CDS
ATTCAGGAAATTGATAAAGT+TGG 0.412558 5_3:-16082996 None:intergenic
TCTAGGGACGAGTAAGTTTA+CGG 0.412611 5_3:-16083228 None:intergenic
TTAAATATGCTATTAGTACT+AGG 0.413869 5_3:+16083139 Msa0801920:three_prime_UTR
GAAGGGAATTGATGACATAA+TGG 0.416372 5_3:+16082491 Msa0801920:CDS
ATATGATATTTGTAGTTCAA+TGG 0.421657 5_3:+16082121 Msa0801920:intron
TATGTGTTGTAGGTATTGAT+TGG 0.421809 5_3:+16082722 Msa0801920:intron
ATTGATTGTCCTTCTCTGTA+AGG 0.428154 5_3:-16080777 None:intergenic
CATTTACAGTACTTGGGTCT+AGG 0.438371 5_3:-16083245 None:intergenic
AGAAGCACCTGCTCCTGTTA+AGG 0.442455 5_3:+16080074 Msa0801920:CDS
ATTTGCATCAATCCAAACTT+TGG 0.443484 5_3:-16083205 None:intergenic
TGATGCCGGAGAAGTTGTTA+AGG 0.448771 5_3:+16081214 Msa0801920:CDS
ACCATGATGACGGTGGCATT+AGG 0.466209 5_3:-16081640 None:intergenic
CTTCAACTGTCTCTTGTACT+CGG 0.468568 5_3:-16082746 None:intergenic
TAAAGCAGTGAGCTGCTTGT+GGG 0.469081 5_3:-16082169 None:intergenic
AAACTCATGCATGAGCCATC+AGG 0.489065 5_3:+16083098 Msa0801920:three_prime_UTR
CGAGAAGCATGAAGATTACA+AGG 0.497025 5_3:+16081834 Msa0801920:CDS
AGAAGACACCTTCCAATGTA+TGG 0.498391 5_3:-16080159 None:intergenic
CACAATACGCAGAAGAGTTG+TGG 0.498754 5_3:+16082412 Msa0801920:CDS
AAGTCAAGCCTGAAGTTCTC+AGG 0.498853 5_3:-16082327 None:intergenic
ACTCCACTTCTCTTCCGATC+AGG 0.500775 5_3:+16079754 Msa0801920:CDS
TCAATTGCTAGCAGTGCTCT+TGG 0.502382 5_3:+16080858 Msa0801920:CDS
TGTAGTTCAATGGTTTGGCA+TGG 0.502735 5_3:+16082131 Msa0801920:intron
GTTTCACTCGCTGCCAAAGA+AGG 0.504760 5_3:+16082513 Msa0801920:CDS
GTAATCTATCTACAGAATAC+AGG 0.506663 5_3:-16082865 None:intergenic
ACAATACGCAGAAGAGTTGT+GGG 0.513315 5_3:+16082413 Msa0801920:CDS
ATTTACAGTACTTGGGTCTA+GGG 0.518474 5_3:-16083244 None:intergenic
ACAGGAATTTGAAAAGATGA+AGG 0.521111 5_3:+16082296 Msa0801920:intron
GTACTAGGGATGAGGCAGAT+TGG 0.521890 5_3:+16083154 Msa0801920:three_prime_UTR
ATGATGCACCTGGTGAAACT+TGG 0.522730 5_3:+16080202 Msa0801920:CDS
AGTGGAGTTGGAGTATGGAA+AGG 0.528772 5_3:-16079739 None:intergenic
ACAGAGAAGGACAATCAATT+GGG 0.529867 5_3:+16080781 Msa0801920:CDS
GTAATCTGTACTTCAGATCC+AGG 0.530710 5_3:-16081580 None:intergenic
TCTTGTGACCAAAACCCCTT+AGG 0.532902 5_3:+16079461 Msa0801920:five_prime_UTR
CCAGATGGTATTGACAAGAA+TGG 0.533775 5_3:+16080810 Msa0801920:CDS
TGCTATTAGTACTAGGGATG+AGG 0.538545 5_3:+16083146 Msa0801920:three_prime_UTR
TCCTAATGCCACCGTCATCA+TGG 0.538982 5_3:+16081639 Msa0801920:CDS
GATGCCGGAGAAGTTGTTAA+GGG 0.540363 5_3:+16081215 Msa0801920:CDS
TGAGCCATCAGGTTACGAGC+AGG 0.541235 5_3:+16083109 Msa0801920:three_prime_UTR
GACTCCCTTAACAACTTCTC+CGG 0.542086 5_3:-16081219 None:intergenic
AATAATATTGTTCACAAGCA+AGG 0.542192 5_3:-16082922 None:intergenic
TAAATATGCTATTAGTACTA+GGG 0.543318 5_3:+16083140 Msa0801920:three_prime_UTR
GATCGGAAGAGAAGTGGAGT+TGG 0.545018 5_3:-16079751 None:intergenic
TTGGTCCGAGTTAGAGACAC+TGG 0.549592 5_3:-16083186 None:intergenic
TGAGATATGGCCTGAAAATG+AGG 0.549695 5_3:+16083072 Msa0801920:three_prime_UTR
CACCCCTGCTCGTAACCTGA+TGG 0.550504 5_3:-16083113 None:intergenic
TTCACCAGGTGCATCATCAC+CGG 0.556250 5_3:-16080196 None:intergenic
AGTTGAAGAAGGCAGAGCAA+TGG 0.557197 5_3:+16082761 Msa0801920:CDS
GGAGAGGTTCCTTACAGAGA+AGG 0.558827 5_3:+16080768 Msa0801920:intron
TAGGCTAAAATGGTCATCAC+AGG 0.561974 5_3:+16079480 Msa0801920:five_prime_UTR
TGTCCTGATCGGAAGAGAAG+TGG 0.571586 5_3:-16079757 None:intergenic
AGCCATCAGGTTACGAGCAG+GGG 0.572220 5_3:+16083111 Msa0801920:three_prime_UTR
ATAAAGCAGTGAGCTGCTTG+TGG 0.572307 5_3:-16082170 None:intergenic
GTACAAGAGACAGTTGAAGA+AGG 0.576995 5_3:+16082750 Msa0801920:CDS
ATTATTTATCTGAGGTCATG+AGG 0.576996 5_3:-16079431 None:intergenic
AATGTACATCCAAACCAGAA+TGG 0.582961 5_3:+16082389 Msa0801920:CDS
TAAGCATTTCTTTACCAACT+GGG 0.583707 5_3:-16081606 None:intergenic
GGACTGAAAGGAATGGAGAA+GGG 0.584337 5_3:+16082474 Msa0801920:CDS
GAATATGCTGCTGCACAAAG+TGG 0.585462 5_3:-16082831 None:intergenic
GAGCCATCAGGTTACGAGCA+GGG 0.586355 5_3:+16083110 Msa0801920:three_prime_UTR
ATAATGTTTCCATTAGTGGA+AGG 0.586548 5_3:+16080025 Msa0801920:CDS
CAAAGACACCATACATTGGA+AGG 0.589657 5_3:+16080151 Msa0801920:CDS
AGGTGCTTCTGTAGCAACTT+CGG 0.589953 5_3:-16080061 None:intergenic
TGGACTGAAAGGAATGGAGA+AGG 0.593496 5_3:+16082473 Msa0801920:CDS
AAACCAAAGACACCATACAT+TGG 0.596092 5_3:+16080147 Msa0801920:CDS
GTACAGATTACTGGCCCAGT+TGG 0.601436 5_3:+16081592 Msa0801920:CDS
TTTGTCATACCAAAATTACA+AGG 0.602419 5_3:-16082891 None:intergenic
AATTCCCAGTGTCTCTAACT+CGG 0.603971 5_3:+16083181 Msa0801920:three_prime_UTR
TTTGAAGACAAGTCTATCTG+GGG 0.606529 5_3:-16079790 None:intergenic
CAGCTCACTGCTTTATAAGG+AGG 0.608066 5_3:+16082177 Msa0801920:CDS
TGATTCTTCCAATAACAACA+TGG 0.609733 5_3:+16079692 Msa0801920:exon
ATGTCTAGATTATTTATCTG+AGG 0.610944 5_3:-16079439 None:intergenic
GTTTACATGTGTGGACTGAA+AGG 0.611115 5_3:+16082462 Msa0801920:CDS
ACCATGTGCCAAGTTTCACC+AGG 0.614512 5_3:-16080210 None:intergenic
CTTGTGTACACAAATGATGC+CGG 0.615312 5_3:+16081200 Msa0801920:CDS
TTGTCATACCAAAATTACAA+GGG 0.619687 5_3:-16082890 None:intergenic
AAAGCAGTGAGCTGCTTGTG+GGG 0.619800 5_3:-16082168 None:intergenic
AAATTTGTGAGCCAGAGAAG+TGG 0.620867 5_3:-16079553 None:intergenic
GAATACAATCTCAGCTTGTG+AGG 0.622294 5_3:-16080837 None:intergenic
AGAGAACAAGTAAACGACAA+AGG 0.624485 5_3:+16082360 Msa0801920:CDS
TCAAAGATATTATGATTGAG+TGG 0.626581 5_3:-16079579 None:intergenic
GAAATAACAGATGTCCTGAT+CGG 0.627473 5_3:-16079768 None:intergenic
CTTCTCAACACAAAGATCAC+CGG 0.628852 5_3:+16080177 Msa0801920:CDS
ATATCAAAGAAACAGGAGGA+AGG 0.640788 5_3:+16080105 Msa0801920:CDS
GTTGGAGTATGGAAAGGAGA+CGG 0.641171 5_3:-16079733 None:intergenic
AAAGATATCAAAGAAACAGG+AGG 0.651290 5_3:+16080101 Msa0801920:CDS
TGGTCCGAGTTAGAGACACT+GGG 0.656928 5_3:-16083185 None:intergenic
ACCTGGTGAAACTTGGCACA+TGG 0.659148 5_3:+16080209 Msa0801920:CDS
TCAATTGGGATAGTTCCAGA+TGG 0.670503 5_3:+16080795 Msa0801920:CDS
GAAGTGGTCGATATTATGTG+AGG 0.693308 5_3:-16079537 None:intergenic
CATGTGTGGACTGAAAGGAA+TGG 0.694748 5_3:+16082467 Msa0801920:CDS
TAAGTAATGTACCATGATGA+CGG 0.701831 5_3:-16081650 None:intergenic
ATCACCGGTGATGATGCACC+TGG 0.734264 5_3:+16080192 Msa0801920:CDS
GGAGTATGGAAAGGAGACGG+CGG 0.734819 5_3:-16079730 None:intergenic
GTAATGTACCATGATGACGG+TGG 0.793247 5_3:-16081647 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATTATAATACAAATATT+AGG - chr5_3:16080747-16080766 None:intergenic 10.0%
!! AATATTTGTATTATAATTTC+AGG + chr5_3:16080747-16080766 Msa0801920:intron 10.0%
!!! TTTATAGATCTTTTAAAGAA+TGG + chr5_3:16081966-16081985 Msa0801920:intron 15.0%
!! ATTATTATGAGTATGATATG+AGG + chr5_3:16079975-16079994 Msa0801920:intron 20.0%
!! ATGTAAAAGTAATAATAGAG+AGG - chr5_3:16080270-16080289 None:intergenic 20.0%
!!! CATTACAAGGTTTTAAATTA+CGG + chr5_3:16080298-16080317 Msa0801920:intron 20.0%
!!! TTATCATATACTTGTTTTGA+GGG - chr5_3:16081097-16081116 None:intergenic 20.0%
!!! TTTGATTATTAACTGAGTTT+TGG + chr5_3:16082087-16082106 Msa0801920:intron 20.0%
!! ATATGATATTTGTAGTTCAA+TGG + chr5_3:16082121-16082140 Msa0801920:intron 20.0%
!! TTAAATATGCTATTAGTACT+AGG + chr5_3:16083139-16083158 Msa0801920:three_prime_UTR 20.0%
!! TAAATATGCTATTAGTACTA+GGG + chr5_3:16083140-16083159 Msa0801920:three_prime_UTR 20.0%
! ATGTCTAGATTATTTATCTG+AGG - chr5_3:16079442-16079461 None:intergenic 25.0%
! TCAAAGATATTATGATTGAG+TGG - chr5_3:16079582-16079601 None:intergenic 25.0%
! TCAATGCATGTATATGATTA+TGG - chr5_3:16079834-16079853 None:intergenic 25.0%
! TTGAATAATGTTTCCATTAG+TGG + chr5_3:16080021-16080040 Msa0801920:CDS 25.0%
! AGAAAAGATATCAAAGAAAC+AGG + chr5_3:16080098-16080117 Msa0801920:CDS 25.0%
! TACATTCACTATTCATTACA+AGG + chr5_3:16080285-16080304 Msa0801920:intron 25.0%
! AATAGAAATTCCGATTCTAA+AGG + chr5_3:16080340-16080359 Msa0801920:intron 25.0%
! TAGTATTATGCATTGGATTA+GGG + chr5_3:16080450-16080469 Msa0801920:intron 25.0%
! ATTTCCCAAAATTTGTGTTA+GGG + chr5_3:16080629-16080648 Msa0801920:intron 25.0%
!!! AGATTGTGGTTTTAGAAAAA+TGG - chr5_3:16080669-16080688 None:intergenic 25.0%
!! ATGTTATGATTTCTAGATTG+TGG - chr5_3:16080683-16080702 None:intergenic 25.0%
! ACAATCTAGAAATCATAACA+TGG + chr5_3:16080682-16080701 Msa0801920:intron 25.0%
! TTGTATTATAATTTCAGGAG+AGG + chr5_3:16080752-16080771 Msa0801920:intron 25.0%
!! TTAATAAAGACTCACAGTTT+TGG - chr5_3:16080898-16080917 None:intergenic 25.0%
! ACTGTGAGTCTTTATTAATT+TGG + chr5_3:16080900-16080919 Msa0801920:intron 25.0%
!! AAAGTTCGAATTTTGTAACA+GGG - chr5_3:16081034-16081053 None:intergenic 25.0%
!! AAAAGTTCGAATTTTGTAAC+AGG - chr5_3:16081035-16081054 None:intergenic 25.0%
!!! CTTATCATATACTTGTTTTG+AGG - chr5_3:16081098-16081117 None:intergenic 25.0%
!! GAAGTTTTTACAACTTATAC+TGG - chr5_3:16081489-16081508 None:intergenic 25.0%
!!! GAGAAAATTTTAAGGATCAA+CGG - chr5_3:16081753-16081772 None:intergenic 25.0%
!! TTAAAATTTTCTCTGCAGTT+GGG + chr5_3:16081760-16081779 Msa0801920:intron 25.0%
!! ACATTTTCCATAAAAATGAG+CGG - chr5_3:16081810-16081829 None:intergenic 25.0%
! GTAGTTGCAATAAATTAAAG+TGG - chr5_3:16081931-16081950 None:intergenic 25.0%
! ATATTTGTAGTTCAATGGTT+TGG + chr5_3:16082126-16082145 Msa0801920:intron 25.0%
! CTACTTTAATTGTATGATAC+AGG + chr5_3:16082278-16082297 Msa0801920:intron 25.0%
!! AATGTTTTTCTTACCTTCTT+TGG - chr5_3:16082529-16082548 None:intergenic 25.0%
!! TTTTATTACATGAAGCATAG+AGG + chr5_3:16082555-16082574 Msa0801920:intron 25.0%
! TTTATTACATGAAGCATAGA+GGG + chr5_3:16082556-16082575 Msa0801920:intron 25.0%
! TTGTCATACCAAAATTACAA+GGG - chr5_3:16082893-16082912 None:intergenic 25.0%
! TTTGTCATACCAAAATTACA+AGG - chr5_3:16082894-16082913 None:intergenic 25.0%
! AATAATATTGTTCACAAGCA+AGG - chr5_3:16082925-16082944 None:intergenic 25.0%
!! TGTTGCAAGAAATAATTTTG+AGG + chr5_3:16082953-16082972 Msa0801920:three_prime_UTR 25.0%
! ATTCAGGAAATTGATAAAGT+TGG - chr5_3:16082999-16083018 None:intergenic 25.0%
! GAATATTCACAATCAAATTC+AGG - chr5_3:16083015-16083034 None:intergenic 25.0%
!! GTCTAATTTTAGATGAGATA+TGG + chr5_3:16083059-16083078 Msa0801920:three_prime_UTR 25.0%
! ATTATTTATCTGAGGTCATG+AGG - chr5_3:16079434-16079453 None:intergenic 30.0%
!!! TGTTTGAGTTTTTTTCTGGT+TGG - chr5_3:16079606-16079625 None:intergenic 30.0%
TGATTCTTCCAATAACAACA+TGG + chr5_3:16079692-16079711 Msa0801920:exon 30.0%
!! TTTTGAAGACAAGTCTATCT+GGG - chr5_3:16079794-16079813 None:intergenic 30.0%
!! TTTTTGAAGACAAGTCTATC+TGG - chr5_3:16079795-16079814 None:intergenic 30.0%
AGATAGACTTGTCTTCAAAA+AGG + chr5_3:16079794-16079813 Msa0801920:CDS 30.0%
ATAATGTTTCCATTAGTGGA+AGG + chr5_3:16080025-16080044 Msa0801920:CDS 30.0%
! GATATCTTTTCTACCTTAAC+AGG - chr5_3:16080090-16080109 None:intergenic 30.0%
AAAGATATCAAAGAAACAGG+AGG + chr5_3:16080101-16080120 Msa0801920:CDS 30.0%
!! TTATCAGACTCCTTTAGAAT+CGG - chr5_3:16080353-16080372 None:intergenic 30.0%
!! GGTTTTCTAGTATTATGCAT+TGG + chr5_3:16080443-16080462 Msa0801920:intron 30.0%
CTAGTATTATGCATTGGATT+AGG + chr5_3:16080449-16080468 Msa0801920:intron 30.0%
!! CTAACACAAATTTTGGGAAA+TGG - chr5_3:16080630-16080649 None:intergenic 30.0%
CATTTCCCAAAATTTGTGTT+AGG + chr5_3:16080628-16080647 Msa0801920:intron 30.0%
! CATTCCCTAACACAAATTTT+GGG - chr5_3:16080636-16080655 None:intergenic 30.0%
! ACATTCCCTAACACAAATTT+TGG - chr5_3:16080637-16080656 None:intergenic 30.0%
AAAATTTGTGTTAGGGAATG+TGG + chr5_3:16080636-16080655 Msa0801920:intron 30.0%
! AAGTTCGAATTTTGTAACAG+GGG - chr5_3:16081033-16081052 None:intergenic 30.0%
TGCTGCTCTTAAATTCATTT+GGG - chr5_3:16081074-16081093 None:intergenic 30.0%
CTGATATGATTCCTTTATAC+AGG + chr5_3:16081157-16081176 Msa0801920:intron 30.0%
! AAGGATGAATGCTTTTACTT+TGG + chr5_3:16081260-16081279 Msa0801920:intron 30.0%
GTCAATGTTCTAATCAATTG+AGG + chr5_3:16081345-16081364 Msa0801920:intron 30.0%
ATAGTAAAGTCTCCACATTA+GGG - chr5_3:16081386-16081405 None:intergenic 30.0%
TATAGTAAAGTCTCCACATT+AGG - chr5_3:16081387-16081406 None:intergenic 30.0%
ACAGTGGTGATTAGTATAAA+GGG - chr5_3:16081533-16081552 None:intergenic 30.0%
TAAGCATTTCTTTACCAACT+GGG - chr5_3:16081609-16081628 None:intergenic 30.0%
ATAAGCATTTCTTTACCAAC+TGG - chr5_3:16081610-16081629 None:intergenic 30.0%
TAAGTAATGTACCATGATGA+CGG - chr5_3:16081653-16081672 None:intergenic 30.0%
! CTTTTCGATATAGATGAAGA+TGG - chr5_3:16081677-16081696 None:intergenic 30.0%
AACAGTCAAGACAAAAGAAA+GGG - chr5_3:16081722-16081741 None:intergenic 30.0%
! CAACTGCAGAGAAAATTTTA+AGG - chr5_3:16081761-16081780 None:intergenic 30.0%
! CTTAAAATTTTCTCTGCAGT+TGG + chr5_3:16081759-16081778 Msa0801920:intron 30.0%
TACAAGGTAAGAGAAGAATT+TGG + chr5_3:16081850-16081869 Msa0801920:intron 30.0%
! AAGAGAAGAATTTGGAACAA+AGG + chr5_3:16081858-16081877 Msa0801920:intron 30.0%
GCAATAAATTAAAGTGGCAA+CGG - chr5_3:16081925-16081944 None:intergenic 30.0%
!!! TTAACTGAGTTTTGGACTTT+TGG + chr5_3:16082095-16082114 Msa0801920:intron 30.0%
TGCTACAAGTTATGTAGAAT+GGG + chr5_3:16082238-16082257 Msa0801920:intron 30.0%
ACAGGAATTTGAAAAGATGA+AGG + chr5_3:16082296-16082315 Msa0801920:intron 30.0%
!! AACACTTTTGTTTACATGTG+TGG + chr5_3:16082453-16082472 Msa0801920:CDS 30.0%
TTATTACATGAAGCATAGAG+GGG + chr5_3:16082557-16082576 Msa0801920:intron 30.0%
TGAAATTCAAACCATGATGA+AGG + chr5_3:16082623-16082642 Msa0801920:intron 30.0%
! TAGTATTTTCTCCTTCATCA+TGG - chr5_3:16082637-16082656 None:intergenic 30.0%
AACACATAACAAACACAACA+TGG - chr5_3:16082710-16082729 None:intergenic 30.0%
!! TTGTGTTTGTTATGTGTTGT+AGG + chr5_3:16082712-16082731 Msa0801920:intron 30.0%
!! TATGTGTTGTAGGTATTGAT+TGG + chr5_3:16082722-16082741 Msa0801920:intron 30.0%
GTAATCTATCTACAGAATAC+AGG - chr5_3:16082868-16082887 None:intergenic 30.0%
! GATTACAACCCTTGTAATTT+TGG + chr5_3:16082882-16082901 Msa0801920:three_prime_UTR 30.0%
ATTTGCATCAATCCAAACTT+TGG - chr5_3:16083208-16083227 None:intergenic 30.0%
!! TGATGACCATTTTAGCCTAA+GGG - chr5_3:16079479-16079498 None:intergenic 35.0%
!!! GCAGTGTTTGAGTTTTTTTC+TGG - chr5_3:16079610-16079629 None:intergenic 35.0%
GAAATAACAGATGTCCTGAT+CGG - chr5_3:16079771-16079790 None:intergenic 35.0%
TTTGAAGACAAGTCTATCTG+GGG - chr5_3:16079793-16079812 None:intergenic 35.0%
! TATACATGCATTGATCCAAC+CGG + chr5_3:16079840-16079859 Msa0801920:intron 35.0%
TAAATTATCAGTGTCGTGTC+CGG - chr5_3:16079862-16079881 None:intergenic 35.0%
ATATCAAAGAAACAGGAGGA+AGG + chr5_3:16080105-16080124 Msa0801920:CDS 35.0%
AAACCAAAGACACCATACAT+TGG + chr5_3:16080147-16080166 Msa0801920:CDS 35.0%
AGATGATGTAACTTCAATCG+CGG + chr5_3:16080603-16080622 Msa0801920:intron 35.0%
ATTGATTGTCCTTCTCTGTA+AGG - chr5_3:16080780-16080799 None:intergenic 35.0%
TACAGAGAAGGACAATCAAT+TGG + chr5_3:16080780-16080799 Msa0801920:CDS 35.0%
ACAGAGAAGGACAATCAATT+GGG + chr5_3:16080781-16080800 Msa0801920:CDS 35.0%
TTTCTGTACTGTATTGTAGC+TGG + chr5_3:16080939-16080958 Msa0801920:intron 35.0%
TTCTGTACTGTATTGTAGCT+GGG + chr5_3:16080940-16080959 Msa0801920:intron 35.0%
! AATTTTGTAACAGGGGTCAA+TGG - chr5_3:16081026-16081045 None:intergenic 35.0%
! GTGCTGCTCTTAAATTCATT+TGG - chr5_3:16081075-16081094 None:intergenic 35.0%
! TTGCCAACACATCTTTTGTA+TGG + chr5_3:16081118-16081137 Msa0801920:intron 35.0%
! TGCCAACACATCTTTTGTAT+GGG + chr5_3:16081119-16081138 Msa0801920:intron 35.0%
TACCCATACAAAAGATGTGT+TGG - chr5_3:16081124-16081143 None:intergenic 35.0%
ACAGAGAGAAACCTGTATAA+AGG - chr5_3:16081171-16081190 None:intergenic 35.0%
CTGCTCTAATTTCTTGTGTA+AGG + chr5_3:16081241-16081260 Msa0801920:intron 35.0%
TTAGAGTCCTCAAATGCAAA+TGG - chr5_3:16081291-16081310 None:intergenic 35.0%
CAGTGGTGATTAGTATAAAG+GGG - chr5_3:16081532-16081551 None:intergenic 35.0%
CACAGTGGTGATTAGTATAA+AGG - chr5_3:16081534-16081553 None:intergenic 35.0%
CAACAGTCAAGACAAAAGAA+AGG - chr5_3:16081723-16081742 None:intergenic 35.0%
TCCATAAAAATGAGCGGAAT+GGG - chr5_3:16081804-16081823 None:intergenic 35.0%
TTCCATAAAAATGAGCGGAA+TGG - chr5_3:16081805-16081824 None:intergenic 35.0%
TTACTTTGCTTGTGCTTACT+AGG - chr5_3:16082004-16082023 None:intergenic 35.0%
CTGCTACAAGTTATGTAGAA+TGG + chr5_3:16082237-16082256 Msa0801920:intron 35.0%
AGAGAACAAGTAAACGACAA+AGG + chr5_3:16082360-16082379 Msa0801920:CDS 35.0%
AATGTACATCCAAACCAGAA+TGG + chr5_3:16082389-16082408 Msa0801920:CDS 35.0%
! GAAGGGAATTGATGACATAA+TGG + chr5_3:16082491-16082510 Msa0801920:CDS 35.0%
TATTACATGAAGCATAGAGG+GGG + chr5_3:16082558-16082577 Msa0801920:intron 35.0%
! TGAGTTTGATCCTCATTTTC+AGG - chr5_3:16083085-16083104 None:intergenic 35.0%
!! CATTTTAGCCTAAGGGGTTT+TGG - chr5_3:16079472-16079491 None:intergenic 40.0%
CAAAACCCCTTAGGCTAAAA+TGG + chr5_3:16079470-16079489 Msa0801920:five_prime_UTR 40.0%
!! GATGACCATTTTAGCCTAAG+GGG - chr5_3:16079478-16079497 None:intergenic 40.0%
!! GTGATGACCATTTTAGCCTA+AGG - chr5_3:16079480-16079499 None:intergenic 40.0%
TAGGCTAAAATGGTCATCAC+AGG + chr5_3:16079480-16079499 Msa0801920:five_prime_UTR 40.0%
GAAGTGGTCGATATTATGTG+AGG - chr5_3:16079540-16079559 None:intergenic 40.0%
CATAATATCGACCACTTCTC+TGG + chr5_3:16079542-16079561 Msa0801920:five_prime_UTR 40.0%
AAATTTGTGAGCCAGAGAAG+TGG - chr5_3:16079556-16079575 None:intergenic 40.0%
ACACTTACACTTCAGATCGA+AGG - chr5_3:16079948-16079967 None:intergenic 40.0%
TGAGGTGATGTTTGTTTGTC+AGG + chr5_3:16079993-16080012 Msa0801920:intron 40.0%
GACTGTTAACCTTCCACTAA+TGG - chr5_3:16080037-16080056 None:intergenic 40.0%
! TTTTCTACCTTAACAGGAGC+AGG - chr5_3:16080084-16080103 None:intergenic 40.0%
CTTCCAATGTATGGTGTCTT+TGG - chr5_3:16080153-16080172 None:intergenic 40.0%
CAAAGACACCATACATTGGA+AGG + chr5_3:16080151-16080170 Msa0801920:CDS 40.0%
AGAAGACACCTTCCAATGTA+TGG - chr5_3:16080162-16080181 None:intergenic 40.0%
CTTCTCAACACAAAGATCAC+CGG + chr5_3:16080177-16080196 Msa0801920:CDS 40.0%
TCAATTGGGATAGTTCCAGA+TGG + chr5_3:16080795-16080814 Msa0801920:CDS 40.0%
CCATTCTTGTCAATACCATC+TGG - chr5_3:16080813-16080832 None:intergenic 40.0%
!! CCAGATGGTATTGACAAGAA+TGG + chr5_3:16080810-16080829 Msa0801920:CDS 40.0%
GAATACAATCTCAGCTTGTG+AGG - chr5_3:16080840-16080859 None:intergenic 40.0%
CTTGTGTACACAAATGATGC+CGG + chr5_3:16081200-16081219 Msa0801920:CDS 40.0%
GGCATTTCCATTTGCATTTG+AGG + chr5_3:16081281-16081300 Msa0801920:intron 40.0%
TAAAGTCTCCACATTAGGGA+GGG - chr5_3:16081382-16081401 None:intergenic 40.0%
CTGAATAAAGAGGATCACAG+TGG - chr5_3:16081549-16081568 None:intergenic 40.0%
CACTGTGATCCTCTTTATTC+AGG + chr5_3:16081547-16081566 Msa0801920:intron 40.0%
TTCAAGTCGCCTGAATAAAG+AGG - chr5_3:16081559-16081578 None:intergenic 40.0%
GTAATCTGTACTTCAGATCC+AGG - chr5_3:16081583-16081602 None:intergenic 40.0%
! GGATCTGAAGTACAGATTAC+TGG + chr5_3:16081583-16081602 Msa0801920:CDS 40.0%
CCATAAAAATGAGCGGAATG+GGG - chr5_3:16081803-16081822 None:intergenic 40.0%
! CGAGAAGCATGAAGATTACA+AGG + chr5_3:16081834-16081853 Msa0801920:CDS 40.0%
TTCTGGTAACATCGATCACT+TGG - chr5_3:16081893-16081912 None:intergenic 40.0%
AATTAAAGTGGCAACGGTTG+TGG - chr5_3:16081919-16081938 None:intergenic 40.0%
! TGTAGTTCAATGGTTTGGCA+TGG + chr5_3:16082131-16082150 Msa0801920:intron 40.0%
AAGCAGCTCACTGCTTTATA+AGG + chr5_3:16082174-16082193 Msa0801920:CDS 40.0%
ACAATACGCAGAAGAGTTGT+GGG + chr5_3:16082413-16082432 Msa0801920:CDS 40.0%
! GTTTACATGTGTGGACTGAA+AGG + chr5_3:16082462-16082481 Msa0801920:CDS 40.0%
ATTACATGAAGCATAGAGGG+GGG + chr5_3:16082559-16082578 Msa0801920:intron 40.0%
GGTTTGAGCTAATGGTTAGA+AGG + chr5_3:16082598-16082617 Msa0801920:intron 40.0%
CTTCAACTGTCTCTTGTACT+CGG - chr5_3:16082749-16082768 None:intergenic 40.0%
GTACAAGAGACAGTTGAAGA+AGG + chr5_3:16082750-16082769 Msa0801920:CDS 40.0%
TGAGATATGGCCTGAAAATG+AGG + chr5_3:16083072-16083091 Msa0801920:three_prime_UTR 40.0%
TGCTATTAGTACTAGGGATG+AGG + chr5_3:16083146-16083165 Msa0801920:three_prime_UTR 40.0%
AATTCCCAGTGTCTCTAACT+CGG + chr5_3:16083181-16083200 Msa0801920:three_prime_UTR 40.0%
TCTAGGGACGAGTAAGTTTA+CGG - chr5_3:16083231-16083250 None:intergenic 40.0%
TCTTGTGACCAAAACCCCTT+AGG + chr5_3:16079461-16079480 Msa0801920:five_prime_UTR 45.0%
TGCAGCAGCCATGTTGTTAT+TGG - chr5_3:16079703-16079722 None:intergenic 45.0%
GTTGGAGTATGGAAAGGAGA+CGG - chr5_3:16079736-16079755 None:intergenic 45.0%
AGTGGAGTTGGAGTATGGAA+AGG - chr5_3:16079742-16079761 None:intergenic 45.0%
AGAGAAGTGGAGTTGGAGTA+TGG - chr5_3:16079747-16079766 None:intergenic 45.0%
TTAGTGACAGACACTGACAC+CGG + chr5_3:16079917-16079936 Msa0801920:intron 45.0%
AGGTGCTTCTGTAGCAACTT+CGG - chr5_3:16080064-16080083 None:intergenic 45.0%
ATGATGCACCTGGTGAAACT+TGG + chr5_3:16080202-16080221 Msa0801920:CDS 45.0%
!! CACATGGTTTTCAGCACTGA+GGG + chr5_3:16080225-16080244 Msa0801920:CDS 45.0%
GAAAACCACACCAGTCATTC+TGG - chr5_3:16080430-16080449 None:intergenic 45.0%
AAACGCTAATGCGGATCAAG+TGG - chr5_3:16080514-16080533 None:intergenic 45.0%
CAAGTGGACAAACGCTAATG+CGG - chr5_3:16080523-16080542 None:intergenic 45.0%
GACTCATATTCGCTAGCAAG+TGG - chr5_3:16080539-16080558 None:intergenic 45.0%
TCAATTGCTAGCAGTGCTCT+TGG + chr5_3:16080858-16080877 Msa0801920:CDS 45.0%
!! AGCAGTGCTCTTGGTGATTT+TGG + chr5_3:16080867-16080886 Msa0801920:CDS 45.0%
TGATGCCGGAGAAGTTGTTA+AGG + chr5_3:16081214-16081233 Msa0801920:CDS 45.0%
GATGCCGGAGAAGTTGTTAA+GGG + chr5_3:16081215-16081234 Msa0801920:CDS 45.0%
GACTCCCTTAACAACTTCTC+CGG - chr5_3:16081222-16081241 None:intergenic 45.0%
TTCTTTCTCCCTCCCTAATG+TGG + chr5_3:16081371-16081390 Msa0801920:intron 45.0%
GTAAAGTCTCCACATTAGGG+AGG - chr5_3:16081383-16081402 None:intergenic 45.0%
! ACGGTGGCATTAGGATCTTT+TGG - chr5_3:16081634-16081653 None:intergenic 45.0%
!! GTAATGTACCATGATGACGG+TGG - chr5_3:16081650-16081669 None:intergenic 45.0%
! TTTTCTCTGCAGTTGGGAAC+TGG + chr5_3:16081766-16081785 Msa0801920:intron 45.0%
!! CCCCATTCCGCTCATTTTTA+TGG + chr5_3:16081800-16081819 Msa0801920:CDS 45.0%
TAAAGCAGTGAGCTGCTTGT+GGG - chr5_3:16082172-16082191 None:intergenic 45.0%
ATAAAGCAGTGAGCTGCTTG+TGG - chr5_3:16082173-16082192 None:intergenic 45.0%
CAGCTCACTGCTTTATAAGG+AGG + chr5_3:16082177-16082196 Msa0801920:CDS 45.0%
!! AGAAAGCACCTGAGAACTTC+AGG + chr5_3:16082319-16082338 Msa0801920:CDS 45.0%
AAGTCAAGCCTGAAGTTCTC+AGG - chr5_3:16082330-16082349 None:intergenic 45.0%
! CGTATTGTGCCATTCTGGTT+TGG - chr5_3:16082401-16082420 None:intergenic 45.0%
! TTCTGCGTATTGTGCCATTC+TGG - chr5_3:16082406-16082425 None:intergenic 45.0%
CACAATACGCAGAAGAGTTG+TGG + chr5_3:16082412-16082431 Msa0801920:CDS 45.0%
! CATGTGTGGACTGAAAGGAA+TGG + chr5_3:16082467-16082486 Msa0801920:CDS 45.0%
TGGACTGAAAGGAATGGAGA+AGG + chr5_3:16082473-16082492 Msa0801920:CDS 45.0%
GGACTGAAAGGAATGGAGAA+GGG + chr5_3:16082474-16082493 Msa0801920:CDS 45.0%
!! GCTCAACTGGTTTGAGCTAA+TGG + chr5_3:16082590-16082609 Msa0801920:intron 45.0%
AGTTGAAGAAGGCAGAGCAA+TGG + chr5_3:16082761-16082780 Msa0801920:CDS 45.0%
GAATATGCTGCTGCACAAAG+TGG - chr5_3:16082834-16082853 None:intergenic 45.0%
AAACTCATGCATGAGCCATC+AGG + chr5_3:16083098-16083117 Msa0801920:three_prime_UTR 45.0%
TACTAGGGATGAGGCAGATT+GGG + chr5_3:16083155-16083174 Msa0801920:three_prime_UTR 45.0%
CTCTAACTCGGACCAAAGTT+TGG + chr5_3:16083193-16083212 Msa0801920:three_prime_UTR 45.0%
GATCGGAAGAGAAGTGGAGT+TGG - chr5_3:16079754-16079773 None:intergenic 50.0%
ACTCCACTTCTCTTCCGATC+AGG + chr5_3:16079754-16079773 Msa0801920:CDS 50.0%
TGTCCTGATCGGAAGAGAAG+TGG - chr5_3:16079760-16079779 None:intergenic 50.0%
TTATCAGTGTCGTGTCCGGT+TGG - chr5_3:16079858-16079877 None:intergenic 50.0%
!! AGAAGCACCTGCTCCTGTTA+AGG + chr5_3:16080074-16080093 Msa0801920:CDS 50.0%
TTCACCAGGTGCATCATCAC+CGG - chr5_3:16080199-16080218 None:intergenic 50.0%
ACCTGGTGAAACTTGGCACA+TGG + chr5_3:16080209-16080228 Msa0801920:CDS 50.0%
ACCATGTGCCAAGTTTCACC+AGG - chr5_3:16080213-16080232 None:intergenic 50.0%
! GCACATGGTTTTCAGCACTG+AGG + chr5_3:16080224-16080243 Msa0801920:CDS 50.0%
GTCTCTGACACCAGAATGAC+TGG + chr5_3:16080417-16080436 Msa0801920:intron 50.0%
TGACACCAGAATGACTGGTG+TGG + chr5_3:16080422-16080441 Msa0801920:intron 50.0%
GGAGAGGTTCCTTACAGAGA+AGG + chr5_3:16080768-16080787 Msa0801920:intron 50.0%
TATTCAGGCGACTTGAAGCC+TGG + chr5_3:16081562-16081581 Msa0801920:intron 50.0%
GTACAGATTACTGGCCCAGT+TGG + chr5_3:16081592-16081611 Msa0801920:CDS 50.0%
TCCTAATGCCACCGTCATCA+TGG + chr5_3:16081639-16081658 Msa0801920:CDS 50.0%
!! ACCATGATGACGGTGGCATT+AGG - chr5_3:16081643-16081662 None:intergenic 50.0%
! GGCAACGGTTGTGGATTTTC+TGG - chr5_3:16081910-16081929 None:intergenic 50.0%
! TGGTTTGGCATGGCTCTTCT+TGG + chr5_3:16082141-16082160 Msa0801920:CDS 50.0%
GGTTTGGCATGGCTCTTCTT+GGG + chr5_3:16082142-16082161 Msa0801920:CDS 50.0%
AAAGCAGTGAGCTGCTTGTG+GGG - chr5_3:16082171-16082190 None:intergenic 50.0%
GTTTCACTCGCTGCCAAAGA+AGG + chr5_3:16082513-16082532 Msa0801920:CDS 50.0%
ATGAAGCATAGAGGGGGGTT+TGG + chr5_3:16082564-16082583 Msa0801920:intron 50.0%
GTACTAGGGATGAGGCAGAT+TGG + chr5_3:16083154-16083173 Msa0801920:three_prime_UTR 50.0%
TGGTCCGAGTTAGAGACACT+GGG - chr5_3:16083188-16083207 None:intergenic 50.0%
TTGGTCCGAGTTAGAGACAC+TGG - chr5_3:16083189-16083208 None:intergenic 50.0%
GGAGTATGGAAAGGAGACGG+CGG - chr5_3:16079733-16079752 None:intergenic 55.0%
! CTTCAGATCGAAGGCGTGTC+CGG - chr5_3:16079939-16079958 None:intergenic 55.0%
! ATCACCGGTGATGATGCACC+TGG + chr5_3:16080192-16080211 Msa0801920:CDS 55.0%
CTGCAGTTGGGAACTGGTAC+TGG + chr5_3:16081772-16081791 Msa0801920:intron 55.0%
GGGGGTTTGGATAGCTCAAC+TGG + chr5_3:16082577-16082596 Msa0801920:intron 55.0%
TGAGCCATCAGGTTACGAGC+AGG + chr5_3:16083109-16083128 Msa0801920:three_prime_UTR 55.0%
GAGCCATCAGGTTACGAGCA+GGG + chr5_3:16083110-16083129 Msa0801920:three_prime_UTR 55.0%
AGCCATCAGGTTACGAGCAG+GGG + chr5_3:16083111-16083130 Msa0801920:three_prime_UTR 55.0%
CACCCCTGCTCGTAACCTGA+TGG - chr5_3:16083116-16083135 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 16079429 16083255 16079429 ID=Msa0801920;Name=Msa0801920
chr5_3 mRNA 16079429 16083255 16079429 ID=Msa0801920-mRNA-1;Parent=Msa0801920;Name=Msa0801920-mRNA-1;_AED=0.08;_eAED=0.08;_QI=282|1|1|1|1|1|9|454|361
chr5_3 exon 16079429 16079815 16079429 ID=Msa0801920-mRNA-1:exon:6684;Parent=Msa0801920-mRNA-1
chr5_3 exon 16080015 16080246 16080015 ID=Msa0801920-mRNA-1:exon:6685;Parent=Msa0801920-mRNA-1
chr5_3 exon 16080769 16080902 16080769 ID=Msa0801920-mRNA-1:exon:6686;Parent=Msa0801920-mRNA-1
chr5_3 exon 16081179 16081257 16081179 ID=Msa0801920-mRNA-1:exon:6687;Parent=Msa0801920-mRNA-1
chr5_3 exon 16081569 16081660 16081569 ID=Msa0801920-mRNA-1:exon:6688;Parent=Msa0801920-mRNA-1
chr5_3 exon 16081778 16081855 16081778 ID=Msa0801920-mRNA-1:exon:6689;Parent=Msa0801920-mRNA-1
chr5_3 exon 16082136 16082198 16082136 ID=Msa0801920-mRNA-1:exon:6690;Parent=Msa0801920-mRNA-1
chr5_3 exon 16082300 16082534 16082300 ID=Msa0801920-mRNA-1:exon:6691;Parent=Msa0801920-mRNA-1
chr5_3 exon 16082734 16083255 16082734 ID=Msa0801920-mRNA-1:exon:6692;Parent=Msa0801920-mRNA-1
chr5_3 five_prime_UTR 16079429 16079710 16079429 ID=Msa0801920-mRNA-1:five_prime_utr;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16079711 16079815 16079711 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16080015 16080246 16080015 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16080769 16080902 16080769 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16081179 16081257 16081179 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16081569 16081660 16081569 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16081778 16081855 16081778 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16082136 16082198 16082136 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16082300 16082534 16082300 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 CDS 16082734 16082801 16082734 ID=Msa0801920-mRNA-1:cds;Parent=Msa0801920-mRNA-1
chr5_3 three_prime_UTR 16082802 16083255 16082802 ID=Msa0801920-mRNA-1:three_prime_utr;Parent=Msa0801920-mRNA-1
Gene Sequence

>Msa0801920

ATGGCTGCTGCAGTTACAGCCGCCGTCTCCTTTCCATACTCCAACTCCACTTCTCTTCCGATCAGGACATCTGTTATTTCCCCAGATAGACTTGTCTTCAAAAAGGTTTCATTGAATAATGTTTCCATTAGTGGAAGGTTAACAGTCAGAGCCGAAGTTGCTACAGAAGCACCTGCTCCTGTTAAGGTAGAAAAGATATCAAAGAAACAGGAGGAAGGTATTGTTGTGAACAAGTTTAAACCAAAGACACCATACATTGGAAGGTGTCTTCTCAACACAAAGATCACCGGTGATGATGCACCTGGTGAAACTTGGCACATGGTTTTCAGCACTGAGGGAGAGGTTCCTTACAGAGAAGGACAATCAATTGGGATAGTTCCAGATGGTATTGACAAGAATGGAAAGCCTCACAAGCTGAGATTGTATTCAATTGCTAGCAGTGCTCTTGGTGATTTTGGAGACTCCAAAACTGTTTCTCTCTGTGTGAAACGTCTTGTGTACACAAATGATGCCGGAGAAGTTGTTAAGGGAGTCTGCTCTAATTTCTTGTGCGACTTGAAGCCTGGATCTGAAGTACAGATTACTGGCCCAGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTCATCATGTTGGGAACTGGTACTGGAATTGCCCCATTCCGCTCATTTTTATGGAAAATGTTCTTCGAGAAGCATGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCCACAAGCAGCTCACTGCTTTATAAGGAGGAATTTGAAAAGATGAAGGAGAAAGCACCTGAGAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAACAAGTAAACGACAAAGGAGAGAAAATGTACATCCAAACCAGAATGGCACAATACGCAGAAGAGTTGTGGGAATTACTGAAGAAAGACAACACTTTTGTTTACATGTGTGGACTGAAAGGAATGGAGAAGGGAATTGATGACATAATGGTTTCACTCGCTGCCAAAGAAGGTATTGATTGGACCGAGTACAAGAGACAGTTGAAGAAGGCAGAGCAATGGAATGTTGAAGTCTATTGA

Protein sequence

>Msa0801920

MAAAVTAAVSFPYSNSTSLPIRTSVISPDRLVFKKVSLNNVSISGRLTVRAEVATEAPAPVKVEKISKKQEEGIVVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVQITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKEGIDWTEYKRQLKKAEQWNVEVY*