AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1162370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162370 MtrunA17_Chr7g0258211 94.380 516 26 2 1 516 1 513 0.0 961
Msa1162370 MtrunA17_Chr8g0351801 46.985 481 239 5 50 516 44 522 3.25e-152 445
Msa1162370 MtrunA17_Chr1g0174461 40.078 514 289 5 11 516 6 508 7.02e-141 416
Msa1162370 MtrunA17_Chr7g0258221 43.327 517 267 10 11 516 7 508 1.07e-139 412
Msa1162370 MtrunA17_Chr3g0084921 40.840 524 279 7 6 516 9 514 1.47e-138 410
Msa1162370 MtrunA17_Chr1g0174451 38.327 514 293 6 12 516 11 509 7.63e-138 408
Msa1162370 MtrunA17_Chr1g0174471 41.245 514 279 7 11 514 22 522 9.08e-137 405
Msa1162370 MtrunA17_Chr1g0174481 38.933 506 288 6 13 513 11 500 3.38e-133 395
Msa1162370 MtrunA17_Chr7g0235551 41.564 486 267 6 40 516 34 511 5.26e-131 390
Msa1162370 MtrunA17_Chr1g0174441 38.921 519 291 9 11 516 25 530 3.75e-129 386
Msa1162370 MtrunA17_Chr8g0362701 41.525 472 257 5 51 514 46 506 8.80e-129 385
Msa1162370 MtrunA17_Chr8g0362481 41.387 447 245 5 75 514 1 437 3.06e-122 365
Msa1162370 MtrunA17_Chr4g0030701 37.352 506 287 5 29 514 24 519 8.78e-118 357
Msa1162370 MtrunA17_Chr1g0207841 37.654 486 272 4 51 516 49 523 7.47e-117 354
Msa1162370 MtrunA17_Chr4g0030711 36.364 484 281 4 51 515 48 523 3.77e-113 345
Msa1162370 MtrunA17_Chr7g0224561 35.496 524 297 8 9 513 8 509 3.68e-108 332
Msa1162370 MtrunA17_Chr7g0224551 35.317 521 296 8 9 510 8 506 5.03e-108 332
Msa1162370 MtrunA17_Chr3g0086691 37.008 508 294 9 14 509 10 503 1.57e-106 327
Msa1162370 MtrunA17_Chr4g0058231 35.573 506 292 7 15 507 9 493 6.38e-106 325
Msa1162370 MtrunA17_Chr3g0086661 37.403 516 303 7 9 515 5 509 9.26e-106 325
Msa1162370 MtrunA17_Chr3g0086651 37.403 516 303 7 9 515 5 509 1.65e-105 325
Msa1162370 MtrunA17_Chr8g0344151 35.983 478 284 8 37 505 33 497 6.42e-105 323
Msa1162370 MtrunA17_Chr8g0390881 34.047 514 306 8 9 509 8 501 1.22e-104 322
Msa1162370 MtrunA17_Chr2g0310381 34.055 508 312 7 8 510 2 491 1.44e-104 322
Msa1162370 MtrunA17_Chr2g0310391 33.661 508 314 7 8 510 2 491 3.62e-104 321
Msa1162370 MtrunA17_Chr4g0058191 36.832 505 285 11 12 507 4 483 7.83e-103 317
Msa1162370 MtrunA17_Chr8g0344181 36.695 466 273 7 37 493 35 487 9.20e-103 318
Msa1162370 MtrunA17_Chr4g0061381 35.774 478 285 8 49 515 40 506 1.48e-102 317
Msa1162370 MtrunA17_Chr8g0382901 35.628 494 295 6 20 509 477 951 6.74e-102 327
Msa1162370 MtrunA17_Chr8g0382901 35.897 507 286 8 8 510 2 473 3.32e-101 325
Msa1162370 MtrunA17_Chr3g0116741 36.329 523 294 11 6 516 24 519 1.09e-101 315
Msa1162370 MtrunA17_Chr4g0058281 35.465 516 295 11 13 511 19 513 2.89e-101 314
Msa1162370 MtrunA17_Chr5g0430131 33.969 524 317 8 1 514 1 505 6.20e-101 313
Msa1162370 MtrunA17_Chr3g0116681 35.010 477 288 7 10 483 14 471 6.63e-101 313
Msa1162370 MtrunA17_Chr6g0484811 35.125 521 302 11 2 509 5 502 6.95e-101 313
Msa1162370 MtrunA17_Chr4g0076161 35.236 508 294 15 9 503 7 492 3.98e-100 310
Msa1162370 MtrunA17_Chr6g0484841 34.917 484 288 7 39 511 36 503 4.18e-100 311
Msa1162370 MtrunA17_Chr4g0047631 36.399 511 290 10 8 507 21 507 5.35e-100 311
Msa1162370 MtrunA17_Chr1g0156101 35.729 473 275 8 29 486 24 482 5.39e-100 310
Msa1162370 MtrunA17_Chr3g0101731 34.902 510 300 11 11 509 10 498 1.86e-99 309
Msa1162370 MtrunA17_Chr4g0058201 35.524 487 291 7 29 507 17 488 2.45e-99 308
Msa1162370 MtrunA17_Chr5g0403331 35.524 487 281 8 38 509 33 501 2.49e-99 308
Msa1162370 MtrunA17_Chr5g0431641 34.971 509 302 9 11 511 12 499 3.96e-99 308
Msa1162370 MtrunA17_Chr6g0463791 34.600 500 303 10 10 503 7 488 4.21e-99 308
Msa1162370 MtrunA17_Chr5g0430081 34.436 514 303 9 8 509 8 499 5.09e-99 308
Msa1162370 MtrunA17_Chr3g0101571 33.268 514 312 9 9 511 5 498 6.65e-99 307
Msa1162370 MtrunA17_Chr5g0403351 32.370 519 315 11 6 509 3 500 1.05e-98 307
Msa1162370 MtrunA17_Chr3g0101581 33.723 513 304 11 1 502 1 488 1.27e-98 307
Msa1162370 MtrunA17_Chr5g0430031 35.950 484 274 11 16 483 9 472 1.49e-98 307
Msa1162370 MtrunA17_Chr4g0046331 33.141 519 311 11 17 511 7 513 1.09e-97 305
Msa1162370 MtrunA17_Chr3g0101721 36.566 495 278 13 13 493 12 484 1.49e-97 304
Msa1162370 MtrunA17_Chr3g0101811 34.906 530 295 13 11 510 10 519 1.22e-96 302
Msa1162370 MtrunA17_Chr4g0046351 34.012 491 290 10 40 511 36 511 1.37e-96 302
Msa1162370 MtrunA17_Chr3g0101631 35.119 504 288 13 13 503 8 485 4.96e-96 300
Msa1162370 MtrunA17_Chr5g0445441 34.381 509 305 11 11 511 53 540 5.70e-96 301
Msa1162370 MtrunA17_Chr3g0101691 35.728 515 294 15 4 503 2 494 6.49e-96 300
Msa1162370 MtrunA17_Chr5g0403321 34.200 500 275 11 38 510 32 504 1.37e-95 299
Msa1162370 MtrunA17_Chr4g0046321 33.605 491 292 10 40 511 36 511 1.48e-95 299
Msa1162370 MtrunA17_Chr4g0047641 34.698 513 303 11 8 507 18 511 1.50e-95 299
Msa1162370 MtrunA17_Chr3g0094231 33.906 466 297 5 41 505 37 492 1.54e-95 299
Msa1162370 MtrunA17_Chr5g0445451 34.247 511 307 10 9 511 10 499 1.90e-95 298
Msa1162370 MtrunA17_Chr3g0101601 36.238 505 282 13 13 503 8 486 2.68e-95 298
Msa1162370 MtrunA17_Chr4g0047661 34.503 513 303 11 8 507 20 512 1.04e-94 297
Msa1162370 MtrunA17_Chr8g0344191 33.733 501 309 9 14 505 45 531 2.68e-94 297
Msa1162370 MtrunA17_Chr3g0101701 34.990 523 305 13 4 511 2 504 2.68e-94 296
Msa1162370 MtrunA17_Chr6g0472311 34.503 513 305 10 5 502 7 503 3.23e-94 296
Msa1162370 MtrunA17_Chr5g0430101 32.948 519 317 10 1 509 1 498 6.08e-94 295
Msa1162370 MtrunA17_Chr5g0445461 33.461 523 295 12 9 511 10 499 8.97e-94 294
Msa1162370 MtrunA17_Chr5g0445421 34.442 511 285 12 9 511 84 552 4.47e-93 294
Msa1162370 MtrunA17_Chr3g0101621 35.800 500 284 12 15 503 7 480 4.53e-93 292
Msa1162370 MtrunA17_Chr5g0431671 33.470 487 297 9 34 511 32 500 5.87e-93 292
Msa1162370 MtrunA17_Chr3g0101711 33.333 522 314 13 4 511 2 503 1.04e-92 291
Msa1162370 MtrunA17_Chr1g0156081 33.806 494 298 8 8 486 27 506 2.90e-92 291
Msa1162370 MtrunA17_Chr3g0094171 32.465 499 310 7 12 503 18 496 3.01e-92 290
Msa1162370 MtrunA17_Chr3g0101661 34.698 513 301 14 4 503 2 493 5.29e-92 290
Msa1162370 MtrunA17_Chr4g0011981 36.645 453 265 7 41 486 30 467 6.06e-92 289
Msa1162370 MtrunA17_Chr3g0101611 34.086 487 290 8 36 510 34 501 1.27e-91 289
Msa1162370 MtrunA17_Chr4g0058261 33.884 484 291 8 42 511 64 532 1.81e-91 289
Msa1162370 MtrunA17_Chr5g0401681 35.341 498 289 11 14 500 3 478 1.85e-91 288
Msa1162370 MtrunA17_Chr5g0430091 32.692 520 320 9 1 509 1 501 1.85e-91 288
Msa1162370 MtrunA17_Chr5g0445531 33.824 476 290 8 41 509 39 496 2.29e-91 288
Msa1162370 MtrunA17_Chr1g0162811 32.806 506 313 9 6 503 3 489 3.88e-91 287
Msa1162370 MtrunA17_Chr4g0047691 34.698 513 300 14 8 507 20 510 4.14e-91 288
Msa1162370 MtrunA17_Chr3g0101751 36.327 490 279 10 11 490 17 483 5.30e-91 287
Msa1162370 MtrunA17_Chr3g0101821 34.942 518 302 12 11 516 10 504 8.39e-91 286
Msa1162370 MtrunA17_Chr3g0101801 33.526 519 308 11 11 516 17 511 1.30e-90 286
Msa1162370 MtrunA17_Chr4g0011961 34.000 500 304 9 15 505 6 488 2.07e-90 285
Msa1162370 MtrunA17_Chr8g0361471 33.467 499 296 13 1 488 1 474 3.62e-90 285
Msa1162370 MtrunA17_Chr3g0101651 33.462 517 308 13 10 511 9 504 3.78e-90 285
Msa1162370 MtrunA17_Chr5g0401691 34.661 502 297 10 8 505 26 500 7.52e-90 284
Msa1162370 MtrunA17_Chr5g0445381 33.789 512 309 11 9 510 38 529 1.99e-89 284
Msa1162370 MtrunA17_Chr8g0339331 34.669 499 292 12 27 505 22 506 2.12e-89 283
Msa1162370 MtrunA17_Chr4g0011921 33.333 510 307 10 6 505 3 489 5.35e-89 281
Msa1162370 MtrunA17_Chr4g0053621 33.661 508 301 7 9 505 5 487 1.27e-88 281
Msa1162370 MtrunA17_Chr8g0357421 34.429 517 302 13 13 516 12 504 1.38e-88 281
Msa1162370 MtrunA17_Chr5g0446161 31.985 519 319 10 10 515 5 502 1.55e-88 280
Msa1162370 MtrunA17_Chr5g0431501 34.581 454 279 7 41 488 34 475 4.24e-88 280
Msa1162370 MtrunA17_Chr5g0431461 34.581 454 279 7 41 488 34 475 4.24e-88 280
Msa1162370 MtrunA17_Chr3g0101761 34.394 503 298 10 11 503 10 490 4.38e-88 280
Msa1162370 MtrunA17_Chr8g0339311 31.528 517 320 12 9 504 6 509 5.68e-88 280
Msa1162370 MtrunA17_Chr6g0466331 32.735 501 297 13 1 488 1 474 7.04e-88 279
Msa1162370 MtrunA17_Chr4g0024771 32.613 509 314 9 11 511 12 499 8.47e-88 278
Msa1162370 MtrunA17_Chr6g0451751 33.725 510 311 9 14 505 15 515 8.83e-88 280
Msa1162370 MtrunA17_Chr6g0465511 32.665 499 300 13 1 488 1 474 1.52e-87 278
Msa1162370 MtrunA17_Chr4g0020041 32.061 524 305 13 9 511 8 501 2.30e-87 278
Msa1162370 MtrunA17_Chr4g0011901 34.631 488 290 9 28 505 21 489 1.15e-86 275
Msa1162370 MtrunA17_Chr5g0431511 33.991 456 279 8 41 488 34 475 1.68e-86 275
Msa1162370 MtrunA17_Chr5g0405001 31.884 483 298 7 41 509 45 510 3.79e-86 275
Msa1162370 MtrunA17_Chr8g0357431 35.328 518 297 13 13 516 12 505 6.09e-86 274
Msa1162370 MtrunA17_Chr6g0458561 33.728 507 303 11 17 505 28 519 6.22e-86 275
Msa1162370 MtrunA17_Chr8g0356001 33.075 517 311 13 7 510 10 504 1.93e-85 273
Msa1162370 MtrunA17_Chr8g0372251 32.727 495 297 8 35 510 26 503 2.73e-85 272
Msa1162370 MtrunA17_Chr6g0451691 33.269 520 309 12 8 505 16 519 1.05e-84 271
Msa1162370 MtrunA17_Chr4g0035921 30.377 530 323 10 6 514 11 515 1.11e-84 271
Msa1162370 MtrunA17_Chr6g0451741 32.634 524 315 12 4 505 30 537 1.28e-84 272
Msa1162370 MtrunA17_Chr7g0218601 32.489 474 294 9 21 486 15 470 7.48e-84 268
Msa1162370 MtrunA17_Chr4g0052861 34.578 509 285 12 9 505 11 483 1.25e-83 268
Msa1162370 MtrunA17_Chr3g0101831 34.008 494 295 10 11 493 10 483 1.59e-83 268
Msa1162370 MtrunA17_Chr4g0052851 34.707 461 270 8 37 493 29 462 2.57e-83 267
Msa1162370 MtrunA17_Chr4g0057001 33.402 482 288 7 41 510 51 511 3.93e-83 267
Msa1162370 MtrunA17_Chr1g0167321 34.180 512 291 13 10 503 6 489 4.92e-83 266
Msa1162370 MtrunA17_Chr5g0446151 32.505 483 297 10 41 515 42 503 5.21e-83 266
Msa1162370 MtrunA17_Chr5g0430111 34.491 432 267 6 1 424 1 424 5.43e-83 264
Msa1162370 MtrunA17_Chr7g0218611 33.043 460 286 7 33 486 28 471 6.25e-83 266
Msa1162370 MtrunA17_Chr3g0101671 31.034 522 316 14 9 510 11 508 9.95e-83 266
Msa1162370 MtrunA17_Chr6g0463801 32.218 478 298 9 41 511 38 496 1.70e-82 265
Msa1162370 MtrunA17_Chr3g0082701 32.197 528 321 12 1 505 3 516 2.30e-81 263
Msa1162370 MtrunA17_Chr2g0304871 32.974 464 290 7 40 491 38 492 5.59e-81 261
Msa1162370 MtrunA17_Chr4g0008101 32.563 519 310 11 10 505 14 515 7.15e-81 261
Msa1162370 MtrunA17_Chr4g0052881 32.812 512 305 8 4 505 2 484 1.55e-80 259
Msa1162370 MtrunA17_Chr5g0395331 33.603 494 282 13 20 494 20 486 8.99e-80 258
Msa1162370 MtrunA17_Chr5g0395321 30.785 497 304 10 8 494 13 479 3.54e-79 257
Msa1162370 MtrunA17_Chr7g0246221 32.470 502 317 7 9 503 6 492 3.83e-79 256
Msa1162370 MtrunA17_Chr1g0164211 31.084 489 308 9 37 514 26 496 5.70e-79 255
Msa1162370 MtrunA17_Chr5g0419691 32.035 462 296 7 29 486 20 467 1.22e-78 254
Msa1162370 MtrunA17_Chr1g0160851 31.985 519 305 13 9 514 16 499 1.74e-78 254
Msa1162370 MtrunA17_Chr8g0355961 33.008 512 308 13 12 510 15 504 2.23e-78 254
Msa1162370 MtrunA17_Chr6g0466901 31.528 517 305 13 1 491 1 494 3.93e-78 254
Msa1162370 MtrunA17_Chr4g0017411 34.304 481 278 11 21 496 15 462 3.96e-78 253
Msa1162370 MtrunA17_Chr6g0451641 32.895 532 311 15 6 515 11 518 6.20e-78 253
Msa1162370 MtrunA17_Chr4g0011871 31.423 471 303 7 29 492 20 477 6.67e-78 253
Msa1162370 MtrunA17_Chr1g0162801 32.079 505 285 14 14 493 13 484 1.20e-77 252
Msa1162370 MtrunA17_Chr1g0156061 32.391 460 241 7 29 486 47 438 1.56e-77 251
Msa1162370 MtrunA17_Chr1g0205361 32.577 485 302 10 38 514 32 499 6.60e-77 250
Msa1162370 MtrunA17_Chr7g0254641 30.309 485 307 8 41 507 38 509 3.30e-76 249
Msa1162370 MtrunA17_Chr6g0451781 32.525 495 305 10 30 505 64 548 4.49e-76 250
Msa1162370 MtrunA17_Chr4g0056951 31.938 454 285 7 64 509 68 505 5.27e-76 248
Msa1162370 MtrunA17_Chr2g0296661 34.052 464 277 7 52 505 44 488 1.01e-75 247
Msa1162370 MtrunA17_Chr4g0039391 31.410 468 299 8 50 509 45 498 1.26e-75 247
Msa1162370 MtrunA17_Chr7g0265611 29.688 512 325 10 10 509 26 514 1.31e-75 247
Msa1162370 MtrunA17_Chr5g0395381 31.440 493 281 11 8 494 13 454 1.32e-75 246
Msa1162370 MtrunA17_Chr6g0466941 31.141 517 308 13 1 491 1 495 1.62e-75 247
Msa1162370 MtrunA17_Chr3g0101741 32.662 447 264 10 75 510 1 421 1.76e-75 244
Msa1162370 MtrunA17_Chr4g0011881 32.244 459 291 9 41 492 31 476 2.22e-75 246
Msa1162370 MtrunA17_Chr4g0039901 32.577 485 285 10 35 503 30 488 2.43e-75 246
Msa1162370 MtrunA17_Chr7g0255531 28.911 505 323 11 13 505 9 489 4.03e-74 243
Msa1162370 MtrunA17_Chr4g0046631 32.495 477 299 8 40 505 46 510 4.50e-74 243
Msa1162370 MtrunA17_Chr7g0246131 33.595 509 302 11 7 501 5 491 5.23e-74 243
Msa1162370 MtrunA17_Chr2g0314721 32.500 520 295 15 8 510 12 492 1.14e-73 242
Msa1162370 MtrunA17_Chr2g0314731 33.199 497 282 15 13 488 3 470 1.28e-73 241
Msa1162370 MtrunA17_Chr1g0200961 30.920 511 312 10 17 512 13 497 1.01e-72 239
Msa1162370 MtrunA17_Chr1g0176831 31.557 488 308 10 6 488 34 500 5.00e-72 238
Msa1162370 MtrunA17_Chr2g0280261 32.189 466 278 10 41 493 35 475 3.55e-71 235
Msa1162370 MtrunA17_Chr7g0246151 32.882 517 305 13 3 503 1 491 5.52e-71 234
Msa1162370 MtrunA17_Chr1g0174431 48.826 213 103 3 306 516 1 209 8.08e-71 225
Msa1162370 MtrunA17_Chr1g0205371 31.393 481 305 9 38 510 33 496 1.10e-69 231
Msa1162370 MtrunA17_Chr5g0406651 31.753 485 299 11 21 492 12 477 3.09e-69 230
Msa1162370 MtrunA17_Chr2g0296651 30.159 504 316 10 11 505 7 483 2.38e-67 225
Msa1162370 MtrunA17_Chr7g0246121 30.835 467 293 9 51 505 45 493 1.55e-66 223
Msa1162370 MtrunA17_Chr1g0213671 30.266 489 304 13 41 510 35 505 3.69e-64 217
Msa1162370 MtrunA17_Chr7g0246181 30.577 520 320 12 9 511 6 501 6.02e-62 211
Msa1162370 MtrunA17_Chr1g0200951 29.150 494 310 13 28 505 52 521 1.22e-61 211
Msa1162370 MtrunA17_Chr1g0197881 28.544 515 326 16 11 514 3 486 1.30e-61 209
Msa1162370 MtrunA17_Chr1g0197851 27.813 471 316 10 21 486 15 466 3.22e-61 208
Msa1162370 MtrunA17_Chr1g0197891 28.105 459 307 9 34 486 25 466 7.04e-61 207
Msa1162370 MtrunA17_Chr6g0451681 28.659 492 281 10 30 515 51 478 1.78e-60 206
Msa1162370 MtrunA17_Chr1g0197871 27.311 476 315 11 41 511 35 484 7.28e-60 205
Msa1162370 MtrunA17_Chr1g0174421 34.983 303 191 4 11 309 19 319 2.00e-58 197
Msa1162370 MtrunA17_Chr5g0419451 29.148 446 289 10 68 507 88 512 6.65e-58 200
Msa1162370 MtrunA17_Chr1g0198191 26.357 516 337 13 8 505 18 508 1.79e-56 196
Msa1162370 MtrunA17_Chr5g0430071 31.436 369 226 9 152 509 2 354 8.51e-56 191
Msa1162370 MtrunA17_Chr5g0432751 28.157 483 316 13 36 503 29 495 8.29e-54 189
Msa1162370 MtrunA17_Chr8g0377341 28.330 473 313 11 44 510 71 523 1.41e-53 189
Msa1162370 MtrunA17_Chr1g0210091 28.657 499 333 12 14 502 41 526 5.55e-53 187
Msa1162370 MtrunA17_Chr8g0346261 27.731 476 309 11 42 505 86 538 1.17e-52 187
Msa1162370 MtrunA17_Chr8g0390871 38.991 218 118 3 296 509 17 223 1.35e-52 178
Msa1162370 MtrunA17_Chr5g0431591 31.532 333 205 6 186 511 1 317 3.24e-52 180
Msa1162370 MtrunA17_Chr4g0058211 41.951 205 106 3 305 507 18 211 5.73e-51 173
Msa1162370 MtrunA17_Chr8g0370651 28.060 531 329 20 6 507 11 517 6.26e-50 179
Msa1162370 MtrunA17_Chr8g0370641 27.342 523 330 19 12 507 14 513 4.36e-49 177
Msa1162370 MtrunA17_Chr2g0310351 38.278 209 114 4 306 510 1 198 9.93e-49 167
Msa1162370 MtrunA17_Chr1g0160861 33.910 289 167 7 234 514 68 340 1.98e-48 170
Msa1162370 MtrunA17_Chr4g0030741 31.288 326 201 6 13 329 38 349 1.46e-47 168
Msa1162370 MtrunA17_Chr2g0280081 26.638 458 308 9 64 508 558 1000 3.19e-47 176
Msa1162370 MtrunA17_Chr2g0280081 27.617 449 297 9 64 499 57 490 4.20e-42 161
Msa1162370 MtrunA17_Chr3g0107541 28.910 422 266 12 77 481 90 494 6.72e-47 171
Msa1162370 MtrunA17_Chr5g0413911 26.653 499 328 13 41 513 43 529 1.37e-46 170
Msa1162370 MtrunA17_Chr4g0074581 26.070 514 346 14 9 505 39 535 1.43e-45 167
Msa1162370 MtrunA17_Chr1g0207851 35.206 267 159 3 50 304 48 312 1.78e-45 163
Msa1162370 MtrunA17_Chr6g0451811 38.537 205 116 3 302 505 1 196 3.53e-45 157
Msa1162370 MtrunA17_Chr3g0107611 26.800 500 316 16 8 481 24 499 6.80e-45 166
Msa1162370 MtrunA17_Chr4g0046681 35.217 230 135 3 277 505 6 222 2.63e-44 156
Msa1162370 MtrunA17_Chr4g0011941 38.462 208 113 3 306 509 1 197 5.25e-44 154
Msa1162370 MtrunA17_Chr2g0280071 27.383 493 303 13 41 505 64 529 2.80e-43 163
Msa1162370 MtrunA17_Chr5g0409051 24.848 495 335 12 33 505 22 501 1.06e-42 159
Msa1162370 MtrunA17_Chr8g0387101 28.184 479 269 14 64 505 59 499 1.08e-42 159
Msa1162370 MtrunA17_Chr2g0314781 43.452 168 83 3 322 488 1 157 1.60e-42 149
Msa1162370 MtrunA17_Chr2g0280121 27.137 468 287 11 65 505 62 502 1.63e-42 158
Msa1162370 MtrunA17_Chr6g0463621 37.436 195 104 3 306 493 1 184 3.81e-42 149
Msa1162370 MtrunA17_Chr5g0446101 28.097 331 212 7 186 510 1 311 9.82e-41 149
Msa1162370 MtrunA17_Chr4g0011851 37.566 189 106 2 299 486 9 186 6.07e-40 144
Msa1162370 MtrunA17_Chr3g0101591 34.597 211 123 3 305 511 38 237 1.91e-38 140
Msa1162370 MtrunA17_Chr6g0451771 33.184 223 134 3 297 513 13 226 2.44e-38 140
Msa1162370 MtrunA17_Chr6g0463611 30.201 298 191 9 9 301 21 306 2.93e-38 142
Msa1162370 MtrunA17_Chr2g0334021 25.474 475 318 13 32 492 27 479 1.00e-37 145
Msa1162370 MtrunA17_Chr8g0364651 24.857 523 331 15 9 505 5 491 2.65e-37 144
Msa1162370 MtrunA17_Chr2g0280041 26.022 465 296 9 64 505 89 528 1.91e-36 142
Msa1162370 MtrunA17_Chr3g0086681 39.881 168 90 3 352 515 11 171 3.48e-36 132
Msa1162370 MtrunA17_Chr4g0046661 37.019 208 121 3 299 505 18 216 4.27e-36 134
Msa1162370 MtrunA17_Chr5g0445371 31.538 260 131 6 246 500 1 218 7.63e-36 134
Msa1162370 MtrunA17_Chr5g0445751 30.844 308 191 10 10 306 11 307 2.41e-35 134
Msa1162370 MtrunA17_Chr5g0402981 37.500 192 109 4 316 505 2 184 6.06e-35 130
Msa1162370 MtrunA17_Chr4g0011861 29.965 287 192 5 29 308 20 304 6.84e-35 133
Msa1162370 MtrunA17_Chr5g0445351 39.766 171 88 3 334 500 52 211 7.33e-35 130
Msa1162370 MtrunA17_Chr5g0423621 37.949 195 104 4 322 512 1 182 1.86e-33 125
Msa1162370 MtrunA17_Chr5g0445761 35.211 213 123 3 306 514 1 202 7.13e-33 124
Msa1162370 MtrunA17_Chr6g0477081 34.500 200 118 3 217 415 54 241 1.73e-32 124
Msa1162370 MtrunA17_Chr4g0011931 30.100 299 195 6 12 304 5 295 1.95e-32 125
Msa1162370 MtrunA17_Chr5g0430171 33.023 215 141 1 1 215 1 212 2.10e-32 124
Msa1162370 MtrunA17_Chr4g0046701 40.881 159 84 2 348 505 1 150 3.54e-32 121
Msa1162370 MtrunA17_Chr5g0402971 28.625 269 181 3 30 287 30 298 1.70e-31 124
Msa1162370 MtrunA17_Chr2g0280011 33.495 206 122 3 309 508 11 207 3.84e-31 120
Msa1162370 MtrunA17_Chr5g0430041 39.773 176 88 6 332 500 1 165 7.16e-31 118
Msa1162370 MtrunA17_Chr8g0364631 25.956 497 306 17 41 505 33 499 6.39e-30 122
Msa1162370 MtrunA17_Chr4g0046671 27.402 281 193 4 31 301 35 314 7.55e-30 119
Msa1162370 MtrunA17_Chr5g0430151 35.519 183 102 4 332 509 1 172 2.59e-29 114
Msa1162370 MtrunA17_Chr2g0280061 32.512 203 122 3 309 505 11 204 6.17e-29 114
Msa1162370 MtrunA17_Chr3g0105761 32.673 202 125 4 307 507 1 192 8.99e-29 113
Msa1162370 MtrunA17_Chr3g0107551 32.402 179 110 3 305 481 4 173 9.28e-29 113
Msa1162370 MtrunA17_Chr0c19g0493771 23.385 449 291 15 71 497 218 635 1.88e-27 116
Msa1162370 MtrunA17_Chr1g0179811 25.221 452 284 14 69 497 106 526 2.90e-27 115
Msa1162370 MtrunA17_Chr5g0445411 39.103 156 91 3 14 167 21 174 4.45e-27 107
Msa1162370 MtrunA17_Chr5g0445361 40.441 136 67 3 379 511 12 136 9.54e-27 105
Msa1162370 MtrunA17_Chr3g0101541 40.310 129 65 2 356 483 3 120 1.43e-26 104
Msa1162370 MtrunA17_Chr4g0046691 26.996 263 186 4 41 301 40 298 4.25e-26 108
Msa1162370 MtrunA17_Chr4g0076171 31.551 187 94 4 322 503 1 158 8.71e-26 103
Msa1162370 MtrunA17_Chr3g0117301 35.938 128 70 3 357 483 1 117 1.58e-25 101
Msa1162370 MtrunA17_Chr5g0396521 23.617 470 301 17 70 496 102 556 3.38e-25 109
Msa1162370 MtrunA17_Chr3g0116731 36.129 155 75 4 357 510 1 132 3.53e-25 100
Msa1162370 MtrunA17_Chr2g0293411 25.957 470 279 19 34 480 35 458 1.71e-24 106
Msa1162370 MtrunA17_Chr3g0135841 21.774 496 334 13 42 501 44 521 2.63e-24 106
Msa1162370 MtrunA17_Chr5g0444981 36.098 205 109 7 309 510 12 197 3.03e-24 100
Msa1162370 MtrunA17_Chr5g0403931 24.663 519 324 17 6 509 4 470 4.54e-24 105
Msa1162370 MtrunA17_Chr1g0151221 22.244 499 335 15 37 502 36 514 5.38e-24 105
Msa1162370 MtrunA17_Chr8g0381571 25.113 442 272 17 41 464 44 444 8.56e-24 104
Msa1162370 MtrunA17_Chr8g0372591 35.659 129 82 1 304 431 1 129 1.01e-23 97.1
Msa1162370 MtrunA17_Chr8g0381541 25.113 442 272 17 41 464 44 444 1.24e-23 103
Msa1162370 MtrunA17_Chr5g0431631 36.170 141 85 2 11 149 24 161 1.61e-23 97.1
Msa1162370 MtrunA17_Chr4g0028321 35.507 138 76 2 375 509 27 154 1.79e-23 97.1
Msa1162370 MtrunA17_Chr6g0451801 26.923 312 204 8 12 304 16 322 5.77e-23 99.8
Msa1162370 MtrunA17_Chr1g0203141 25.223 448 261 21 64 483 87 488 6.47e-23 102
Msa1162370 MtrunA17_Chr4g0030761 34.356 163 75 4 357 510 1 140 7.00e-23 94.7
Msa1162370 MtrunA17_Chr6g0479681 26.462 325 192 11 216 511 224 530 3.33e-22 100
Msa1162370 MtrunA17_Chr1g0203151 26.481 287 184 9 233 511 245 512 6.55e-22 99.0
Msa1162370 MtrunA17_Chr3g0117321 41.880 117 68 0 42 158 9 125 7.59e-22 91.3
Msa1162370 MtrunA17_Chr4g0004601 21.973 446 291 14 54 479 92 500 1.22e-21 98.2
Msa1162370 MtrunA17_Chr7g0235261 22.197 446 292 14 54 480 71 480 1.54e-20 94.7
Msa1162370 MtrunA17_Chr8g0351401 22.814 469 312 16 44 485 39 484 2.36e-20 94.4
Msa1162370 MtrunA17_Chr3g0141801 23.977 513 329 17 11 510 15 479 2.38e-20 94.0
Msa1162370 MtrunA17_Chr6g0472221 23.767 446 292 19 54 483 86 499 3.14e-20 94.0
Msa1162370 MtrunA17_Chr8g0369791 22.290 489 320 14 6 485 4 441 8.87e-20 92.0
Msa1162370 MtrunA17_Chr6g0451761 27.857 280 161 10 19 285 21 272 1.87e-19 88.6
Msa1162370 MtrunA17_Chr2g0310371 38.983 118 72 0 41 158 29 146 2.03e-19 85.1
Msa1162370 MtrunA17_Chr4g0026941 22.870 446 289 14 70 488 99 516 2.50e-19 91.3
Msa1162370 MtrunA17_Chr1g0176851 28.216 241 158 7 127 360 2 234 2.92e-19 87.0
Msa1162370 MtrunA17_Chr8g0354531 25.000 436 276 15 65 483 217 618 8.38e-19 89.7
Msa1162370 MtrunA17_Chr7g0215181 23.583 441 288 18 56 483 78 482 1.42e-18 88.6
Msa1162370 MtrunA17_Chr5g0400411 28.230 209 126 6 263 464 253 444 1.47e-18 88.6
Msa1162370 MtrunA17_Chr8g0339861 29.435 248 144 10 227 464 215 441 1.51e-18 88.6
Msa1162370 MtrunA17_Chr6g0449361 23.582 335 219 8 162 476 152 469 2.62e-18 87.8
Msa1162370 MtrunA17_Chr2g0321171 24.359 468 297 18 62 506 59 492 3.71e-18 87.4
Msa1162370 MtrunA17_Chr1g0163491 24.466 515 309 17 16 489 25 500 4.47e-18 87.0
Msa1162370 MtrunA17_Chr6g0449351 23.284 335 220 8 162 476 112 429 9.24e-18 85.9
Msa1162370 MtrunA17_Chr6g0457421 21.581 468 309 17 33 483 54 480 1.67e-17 85.5
Msa1162370 MtrunA17_Chr8g0354511 24.385 447 282 16 59 483 85 497 2.48e-17 84.7
Msa1162370 MtrunA17_Chr1g0164371 21.532 483 330 12 15 490 18 458 2.96e-17 84.3
Msa1162370 MtrunA17_Chr4g0038271 22.633 433 272 12 85 483 130 533 1.01e-16 83.2
Msa1162370 MtrunA17_Chr8g0354571 23.944 426 287 13 69 483 98 497 1.33e-16 82.8
Msa1162370 MtrunA17_Chr6g0484771 33.600 125 83 0 75 199 1 125 1.39e-16 77.0
Msa1162370 MtrunA17_Chr2g0313751 24.471 331 219 9 161 483 209 516 1.62e-16 82.4
Msa1162370 MtrunA17_Chr4g0044851 22.678 463 310 14 28 485 27 446 1.65e-16 82.0
Msa1162370 MtrunA17_Chr7g0219961 25.439 228 150 4 265 489 234 444 2.01e-16 81.6
Msa1162370 MtrunA17_Chr5g0400421 28.571 175 106 3 294 464 286 445 2.28e-16 81.6
Msa1162370 MtrunA17_Chr8g0334941 27.542 236 151 7 255 483 79 301 2.52e-16 80.1
Msa1162370 MtrunA17_Chr6g0455461 26.316 228 148 5 265 489 235 445 2.59e-16 81.3
Msa1162370 MtrunA17_Chr8g0373441 24.138 435 269 18 14 425 9 405 2.86e-16 80.9
Msa1162370 MtrunA17_Chr1g0163281 20.842 499 343 15 16 489 27 498 3.15e-16 81.3
Msa1162370 MtrunA17_Chr5g0429651 23.951 405 262 16 94 476 94 474 3.52e-16 81.3
Msa1162370 MtrunA17_Chr2g0313771 21.005 438 307 13 59 483 85 496 3.71e-16 81.3
Msa1162370 MtrunA17_Chr2g0288661 23.197 319 219 7 169 479 187 487 4.48e-16 80.9
Msa1162370 MtrunA17_Chr1g0184421 21.766 487 307 20 31 480 23 472 5.00e-16 80.9
Msa1162370 MtrunA17_Chr3g0078411 26.582 237 151 6 256 489 229 445 6.50e-16 80.1
Msa1162370 MtrunA17_Chr8g0348751 22.477 436 283 14 86 492 83 492 7.08e-16 80.5
Msa1162370 MtrunA17_Chr3g0107501 23.944 426 266 15 70 481 68 449 7.79e-16 80.1
Msa1162370 MtrunA17_Chr2g0293421 21.397 458 312 15 34 480 39 459 9.37e-16 79.7
Msa1162370 MtrunA17_Chr5g0430051 35.922 103 63 1 7 109 8 107 9.62e-16 73.6
Msa1162370 MtrunA17_Chr7g0248991 22.222 324 212 10 129 431 55 359 1.07e-15 79.0
Msa1162370 MtrunA17_Chr8g0334891 28.390 236 149 8 255 483 234 456 1.73e-15 79.0
Msa1162370 MtrunA17_Chr2g0307291 22.601 323 224 7 169 483 187 491 2.43e-15 78.6
Msa1162370 MtrunA17_Chr4g0044841 21.130 478 324 12 22 492 23 454 2.70e-15 78.2
Msa1162370 MtrunA17_Chr8g0371761 29.221 154 87 3 325 465 1 145 3.15e-15 73.2
Msa1162370 MtrunA17_Chr4g0063221 27.528 178 117 2 307 483 326 492 7.01e-15 77.4
Msa1162370 MtrunA17_Chr1g0154731 24.793 242 159 5 244 483 256 476 7.68e-15 77.0
Msa1162370 MtrunA17_Chr3g0116721 30.303 198 115 6 148 332 3 190 9.35e-15 73.2
Msa1162370 MtrunA17_Chr1g0178971 23.158 475 305 19 55 502 57 498 9.80e-15 76.6
Msa1162370 MtrunA17_Chr8g0387001 22.034 472 299 17 44 476 30 471 1.06e-14 76.6
Msa1162370 MtrunA17_Chr3g0119681 24.678 466 304 18 44 480 40 487 1.31e-14 76.3
Msa1162370 MtrunA17_Chr6g0449381 24.082 245 167 5 241 476 237 471 1.38e-14 76.3
Msa1162370 MtrunA17_Chr5g0445541 40.196 102 56 3 11 110 12 110 1.58e-14 70.9
Msa1162370 MtrunA17_Chr6g0472171 33.846 130 72 4 358 484 14 132 1.65e-14 71.2
Msa1162370 MtrunA17_Chr5g0431601 41.975 81 46 1 77 157 3 82 1.85e-14 68.6
Msa1162370 MtrunA17_Chr8g0372711 23.790 248 169 4 243 487 232 462 1.95e-14 75.9
Msa1162370 MtrunA17_Chr8g0351391 22.776 281 172 8 215 483 236 483 3.04e-14 75.1
Msa1162370 MtrunA17_Chr2g0313781 23.442 337 215 10 161 483 194 501 3.34e-14 75.1
Msa1162370 MtrunA17_Chr4g0004481 25.484 310 191 10 188 476 168 458 3.75e-14 74.7
Msa1162370 MtrunA17_Chr7g0214931 22.571 350 236 10 81 407 98 435 4.41e-14 74.3
Msa1162370 MtrunA17_Chr3g0104351 21.531 418 277 16 86 477 92 484 5.36e-14 74.3
Msa1162370 MtrunA17_Chr8g0380471 28.191 188 117 3 304 488 283 455 7.25e-14 73.9
Msa1162370 MtrunA17_Chr2g0308651 23.421 380 243 13 129 483 32 388 7.30e-14 73.6
Msa1162370 MtrunA17_Chr7g0225531 22.727 506 334 18 10 488 14 489 9.37e-14 73.6
Msa1162370 MtrunA17_Chr2g0310361 27.941 136 96 2 170 304 4 138 1.01e-13 68.6
Msa1162370 MtrunA17_Chr2g0313791 22.684 313 208 9 183 483 194 484 1.47e-13 73.2
Msa1162370 MtrunA17_Chr6g0458571 38.679 106 57 3 18 117 29 132 1.90e-13 67.4
Msa1162370 MtrunA17_Chr1g0204271 24.464 233 146 6 269 489 270 484 2.01e-13 72.8
Msa1162370 MtrunA17_Chr1g0182861 32.540 126 73 3 360 484 23 137 2.13e-13 68.2
Msa1162370 MtrunA17_Chr4g0056981 45.833 72 38 1 332 402 1 72 2.40e-13 65.1
Msa1162370 MtrunA17_Chr2g0313811 23.054 334 220 10 161 483 194 501 2.60e-13 72.4
Msa1162370 MtrunA17_Chr1g0163371 28.646 192 121 5 304 489 20 201 3.17e-13 69.3
Msa1162370 MtrunA17_Chr4g0076181 41.429 70 41 0 75 144 1 70 3.87e-13 67.4
Msa1162370 MtrunA17_Chr1g0163451 25.228 329 195 13 193 489 194 503 7.23e-13 70.9
Msa1162370 MtrunA17_Chr8g0351461 23.221 267 180 7 234 486 229 484 8.19e-13 70.9
Msa1162370 MtrunA17_Chr3g0089361 24.569 232 154 6 255 483 238 451 1.10e-12 70.1
Msa1162370 MtrunA17_Chr2g0313761 22.930 314 216 8 178 483 189 484 1.11e-12 70.1
Msa1162370 MtrunA17_Chr1g0183611 22.253 364 238 11 152 489 60 404 2.70e-12 68.6
Msa1162370 MtrunA17_Chr1g0163421 23.171 328 203 10 193 489 210 519 2.96e-12 68.9
Msa1162370 MtrunA17_Chr8g0351441 22.472 267 182 6 234 486 229 484 6.14e-12 67.8
Msa1162370 MtrunA17_Chr1g0171041 22.652 362 235 11 157 489 141 486 8.39e-12 67.4
Msa1162370 MtrunA17_Chr8g0380931 23.853 218 144 5 273 483 277 479 8.57e-12 67.4
Msa1162370 MtrunA17_Chr6g0463551 28.244 131 86 2 267 389 59 189 1.06e-11 64.3
Msa1162370 MtrunA17_Chr1g0193811 20.267 449 323 14 45 483 66 489 1.15e-11 67.0
Msa1162370 MtrunA17_Chr7g0262111 21.041 442 296 12 56 483 76 478 1.57e-11 66.6
Msa1162370 MtrunA17_Chr7g0227281 21.763 363 243 12 132 476 121 460 2.31e-11 66.2
Msa1162370 MtrunA17_Chr1g0184461 21.616 495 332 18 12 479 6 471 2.95e-11 65.9
Msa1162370 MtrunA17_Chr8g0341951 24.528 212 132 5 276 481 257 446 4.60e-11 65.1
Msa1162370 MtrunA17_Chr5g0443731 23.529 255 168 6 257 501 227 464 4.81e-11 65.1
Msa1162370 MtrunA17_Chr5g0397971 23.750 240 161 6 255 489 230 452 5.36e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162370 AT2G42250.1 47.255 510 264 3 8 516 9 514 6.39e-172 495
Msa1162370 AT5G06905.1 45.419 513 267 8 14 516 7 516 6.07e-157 457
Msa1162370 AT3G20940.1 41.772 474 265 6 41 511 43 508 1.38e-129 387
Msa1162370 AT3G20140.1 43.827 486 257 8 29 511 31 503 1.53e-128 384
Msa1162370 AT4G15360.1 40.514 506 281 10 10 509 11 502 1.20e-127 382
Msa1162370 AT3G20110.1 40.577 520 285 10 1 516 2 501 6.18e-127 380
Msa1162370 AT1G50520.1 42.887 471 258 6 49 516 52 514 1.61e-126 380
Msa1162370 AT3G20090.2 42.217 469 259 6 51 516 54 513 9.03e-126 378
Msa1162370 AT3G20100.1 40.467 514 294 7 7 516 8 513 1.53e-125 377
Msa1162370 AT3G20950.1 39.652 517 292 10 1 509 5 509 3.40e-125 376
Msa1162370 AT3G20120.4 42.074 511 282 7 8 516 12 510 1.57e-124 374
Msa1162370 AT5G47990.1 43.074 462 252 7 51 510 53 505 1.07e-123 372
Msa1162370 AT5G06900.1 38.507 509 282 9 11 511 6 491 9.35e-123 369
Msa1162370 AT5G42580.1 43.421 456 237 7 62 516 62 497 2.39e-121 365
Msa1162370 AT1G50560.1 42.128 470 258 9 51 515 54 514 4.41e-120 363
Msa1162370 AT4G15350.1 42.398 467 251 10 51 510 45 500 2.20e-119 361
Msa1162370 AT3G32047.1 41.556 450 245 7 51 496 53 488 2.67e-119 360
Msa1162370 AT3G20130.1 40.851 470 264 9 51 516 53 512 1.39e-118 359
Msa1162370 AT3G20960.2 41.189 454 256 5 65 516 67 511 1.14e-117 357
Msa1162370 AT2G27000.1 41.432 461 257 8 51 507 50 501 6.01e-117 355
Msa1162370 AT2G14100.1 39.871 464 265 7 51 511 54 506 4.66e-114 347
Msa1162370 AT3G20080.2 39.451 474 274 8 41 510 43 507 3.73e-110 337
Msa1162370 AT3G20080.1 39.451 474 274 8 41 510 43 507 3.73e-110 337
Msa1162370 AT4G15330.1 38.901 473 273 8 42 510 40 500 5.66e-109 334
Msa1162370 AT3G20960.1 41.007 417 235 5 102 516 1 408 4.92e-107 326
Msa1162370 AT3G20130.2 39.723 433 248 8 87 516 62 484 3.65e-106 326
Msa1162370 AT1G28430.1 36.965 514 307 9 1 510 5 505 2.81e-105 325
Msa1162370 AT4G15380.1 37.556 450 264 7 65 511 68 503 1.28e-104 323
Msa1162370 AT3G20120.2 43.081 383 208 5 135 516 1 374 1.02e-102 313
Msa1162370 AT3G20120.3 43.081 383 208 5 135 516 1 374 1.02e-102 313
Msa1162370 AT3G20120.1 43.081 383 208 5 135 516 1 374 1.02e-102 313
Msa1162370 AT5G07990.1 36.224 519 307 11 6 515 2 505 1.31e-101 315
Msa1162370 AT3G20090.1 41.406 384 214 5 135 516 1 375 4.55e-99 304
Msa1162370 AT4G15330.2 37.209 473 253 9 42 510 40 472 1.53e-97 304
Msa1162370 AT2G30770.1 34.908 487 290 9 35 512 28 496 4.71e-97 303
Msa1162370 AT4G13310.1 35.700 493 290 10 29 512 23 497 1.28e-96 301
Msa1162370 AT2G27010.1 37.365 463 255 11 51 507 46 479 1.33e-96 301
Msa1162370 AT2G05180.1 41.149 435 232 5 1 424 5 426 1.27e-94 295
Msa1162370 AT3G26300.1 31.518 514 327 10 10 515 4 500 2.56e-93 293
Msa1162370 AT1G11610.1 32.854 487 300 9 35 512 28 496 3.96e-92 290
Msa1162370 AT1G13080.1 34.314 510 303 11 15 510 8 499 3.75e-90 285
Msa1162370 AT2G30750.1 34.211 494 295 10 29 513 25 497 8.46e-90 284
Msa1162370 AT2G24180.1 33.402 488 287 9 41 514 37 500 1.36e-89 284
Msa1162370 AT1G11610.2 33.547 468 284 9 35 493 28 477 1.37e-89 284
Msa1162370 AT4G13290.1 34.280 493 289 11 29 512 24 490 1.46e-89 283
Msa1162370 AT3G48280.1 34.406 497 299 10 15 505 6 481 8.76e-89 281
Msa1162370 AT4G37330.1 34.252 508 299 9 3 505 1 478 1.34e-88 281
Msa1162370 AT4G31500.1 32.613 463 297 7 30 488 20 471 2.00e-88 280
Msa1162370 AT5G57260.1 33.126 483 299 9 39 510 29 498 2.68e-88 280
Msa1162370 AT3G48300.1 34.820 471 282 9 42 509 31 479 3.47e-88 279
Msa1162370 AT3G48300.2 34.820 471 282 9 42 509 33 481 3.66e-88 279
Msa1162370 AT5G67310.1 32.353 510 310 11 5 507 13 494 5.30e-88 280
Msa1162370 AT3G26310.1 31.055 512 325 10 6 509 2 493 6.16e-88 279
Msa1162370 AT4G12300.1 32.848 481 303 7 41 514 43 510 9.39e-88 279
Msa1162370 AT3G26330.1 32.577 485 303 11 39 514 30 499 1.08e-87 279
Msa1162370 AT5G24950.1 33.403 479 291 9 41 509 33 493 1.88e-87 278
Msa1162370 AT1G13110.1 31.781 494 314 8 13 496 7 487 5.79e-87 277
Msa1162370 AT4G12320.1 31.528 517 329 7 3 510 8 508 8.80e-87 277
Msa1162370 AT3G26280.1 33.465 508 297 9 21 510 15 499 1.56e-86 276
Msa1162370 AT3G26280.2 33.465 508 297 9 21 510 32 516 2.07e-86 276
Msa1162370 AT5G25180.1 30.994 513 321 11 8 510 2 491 3.18e-86 275
Msa1162370 AT3G26230.1 33.268 514 313 9 7 510 2 495 8.75e-86 273
Msa1162370 AT3G20080.4 37.831 378 225 5 135 510 1 370 1.01e-85 270
Msa1162370 AT3G20080.5 37.831 378 225 5 135 510 1 370 1.01e-85 270
Msa1162370 AT3G20080.6 37.831 378 225 5 135 510 1 370 1.01e-85 270
Msa1162370 AT3G20080.3 37.831 378 225 5 135 510 1 370 1.01e-85 270
Msa1162370 AT5G25120.1 32.485 511 311 11 12 510 3 491 1.13e-85 273
Msa1162370 AT4G37370.1 35.516 504 284 14 12 505 7 479 1.76e-85 273
Msa1162370 AT3G26170.1 32.745 510 316 10 14 510 4 499 3.50e-85 272
Msa1162370 AT5G44620.1 31.847 471 296 7 49 510 55 509 4.35e-85 272
Msa1162370 AT3G61040.1 34.504 484 284 12 39 510 32 494 6.77e-85 271
Msa1162370 AT5G25140.1 33.078 523 298 11 7 510 2 491 6.91e-85 271
Msa1162370 AT2G45560.1 32.239 518 314 14 9 510 9 505 1.41e-84 271
Msa1162370 AT5G24960.1 33.402 482 299 8 35 509 28 494 1.46e-84 270
Msa1162370 AT4G37410.1 32.600 500 309 10 13 505 4 482 1.51e-84 270
Msa1162370 AT2G45550.1 32.558 516 315 13 9 510 9 505 3.29e-84 270
Msa1162370 AT3G26180.1 32.784 485 303 8 37 510 27 499 3.60e-84 270
Msa1162370 AT3G48270.1 33.534 498 298 10 12 502 3 474 3.65e-84 269
Msa1162370 AT1G13090.2 33.260 454 281 8 36 481 24 463 4.13e-84 269
Msa1162370 AT5G42590.1 32.685 514 314 9 8 512 7 497 8.13e-84 268
Msa1162370 AT4G31970.1 32.752 516 314 11 12 505 5 509 8.53e-84 269
Msa1162370 AT1G33720.1 32.008 528 302 14 9 510 9 505 1.27e-83 268
Msa1162370 AT4G37430.1 34.241 514 299 17 12 509 1 491 1.85e-83 268
Msa1162370 AT3G26320.1 31.809 481 304 10 39 510 30 495 4.88e-83 266
Msa1162370 AT5G36220.1 32.150 507 307 11 8 505 9 487 5.04e-83 266
Msa1162370 AT4G22710.1 31.770 469 298 9 49 510 62 515 6.57e-83 267
Msa1162370 AT4G36220.1 30.785 484 298 7 48 511 48 514 2.39e-82 265
Msa1162370 AT4G37340.1 34.686 493 283 12 12 494 7 470 3.38e-82 264
Msa1162370 AT3G48310.1 33.111 450 277 8 37 483 29 457 6.75e-82 263
Msa1162370 AT4G22690.1 31.557 469 299 9 49 510 93 546 6.91e-82 265
Msa1162370 AT4G31940.1 32.302 517 316 11 12 505 5 510 1.03e-81 264
Msa1162370 AT3G26210.1 33.333 471 291 8 49 509 40 497 1.62e-81 263
Msa1162370 AT3G48290.1 32.427 478 291 9 29 503 23 471 3.66e-81 261
Msa1162370 AT4G37320.1 33.066 499 302 10 15 505 7 481 1.13e-80 260
Msa1162370 AT2G45580.1 33.612 479 280 9 50 510 48 506 3.60e-80 259
Msa1162370 AT3G26190.1 31.377 494 299 9 36 510 24 496 7.50e-80 258
Msa1162370 AT3G26290.1 31.440 493 308 11 29 510 22 495 7.61e-80 258
Msa1162370 AT3G25180.1 32.227 512 321 11 1 504 1 494 9.36e-80 258
Msa1162370 AT3G26290.2 31.440 493 308 11 29 510 35 508 9.99e-80 258
Msa1162370 AT4G37360.1 32.480 508 306 13 6 505 3 481 1.05e-79 258
Msa1162370 AT3G26150.1 32.157 510 313 13 15 510 9 499 1.91e-79 257
Msa1162370 AT3G20935.1 40.294 340 172 9 194 510 1 332 2.22e-79 252
Msa1162370 AT3G26270.1 32.438 484 307 8 35 510 27 498 3.34e-79 256
Msa1162370 AT3G48320.1 33.194 479 291 10 15 488 8 462 3.96e-79 256
Msa1162370 AT4G13770.1 31.855 496 285 12 16 490 11 474 1.01e-78 255
Msa1162370 AT5G57220.1 33.537 492 293 13 12 498 7 469 1.42e-78 254
Msa1162370 AT4G37310.1 34.091 484 290 11 41 512 31 497 2.58e-78 254
Msa1162370 AT5G10610.1 32.613 509 311 15 8 509 4 487 4.52e-78 253
Msa1162370 AT4G37400.1 32.829 463 285 10 49 505 40 482 7.08e-78 253
Msa1162370 AT2G40890.1 31.213 503 316 13 15 505 4 488 9.82e-78 253
Msa1162370 AT3G26220.1 31.068 515 322 10 8 510 5 498 2.75e-77 251
Msa1162370 AT4G12330.1 30.573 471 301 9 49 510 55 508 3.01e-77 252
Msa1162370 AT3G26160.1 31.950 482 303 8 41 510 31 499 3.37e-77 251
Msa1162370 AT3G44250.1 33.742 489 285 10 36 506 24 491 1.25e-76 250
Msa1162370 AT5G04330.1 30.738 488 311 9 38 511 29 503 1.58e-76 250
Msa1162370 AT5G25130.1 31.818 506 313 9 13 510 10 491 2.43e-76 249
Msa1162370 AT2G45570.1 33.125 480 283 12 49 510 47 506 9.74e-76 248
Msa1162370 AT3G53280.1 32.780 482 280 12 36 497 24 481 1.45e-75 247
Msa1162370 AT3G26200.1 30.972 494 301 9 36 510 24 496 2.26e-75 246
Msa1162370 AT3G48290.2 30.754 504 291 10 29 503 23 497 2.38e-75 247
Msa1162370 AT1G01280.1 31.361 507 321 10 12 505 4 496 3.40e-75 246
Msa1162370 AT4G13310.2 37.433 374 222 7 29 397 23 389 7.70e-75 242
Msa1162370 AT3G28740.1 33.191 470 273 12 37 493 36 477 8.14e-75 245
Msa1162370 AT1G13100.1 31.049 467 297 10 50 506 38 489 9.93e-75 244
Msa1162370 AT2G02580.1 30.561 517 324 14 6 510 2 495 2.08e-74 244
Msa1162370 AT4G12310.1 30.426 470 307 8 49 510 53 510 7.21e-74 243
Msa1162370 AT3G26830.1 30.608 477 309 6 10 481 4 463 1.92e-73 241
Msa1162370 AT2G25160.1 30.814 516 321 15 12 505 4 505 1.16e-72 240
Msa1162370 AT2G23190.1 32.625 518 304 14 3 507 42 527 2.33e-72 240
Msa1162370 AT1G66540.1 33.673 392 231 8 123 507 1 370 1.25e-71 233
Msa1162370 AT5G10600.1 31.601 481 303 11 39 512 45 506 4.68e-71 236
Msa1162370 AT4G20240.1 35.411 401 241 7 29 422 24 413 3.36e-70 231
Msa1162370 AT1G74550.1 31.340 485 272 16 41 508 28 468 9.24e-70 231
Msa1162370 AT4G31950.1 29.923 518 315 12 12 505 5 498 3.79e-69 230
Msa1162370 AT2G23220.1 32.051 468 289 12 36 496 42 487 3.02e-68 228
Msa1162370 AT1G74540.1 28.797 507 324 11 8 505 1 479 1.22e-67 226
Msa1162370 AT3G53300.1 29.918 488 308 8 39 510 27 496 1.85e-65 220
Msa1162370 AT3G52970.1 28.381 525 324 15 12 510 13 511 2.02e-63 215
Msa1162370 AT2G45580.2 40.141 284 147 5 237 510 82 352 4.62e-63 210
Msa1162370 AT3G52970.2 26.952 538 329 14 12 510 13 525 7.70e-63 214
Msa1162370 AT4G20240.2 35.433 381 227 7 29 403 24 391 7.83e-63 211
Msa1162370 AT1G66540.2 35.258 329 187 7 183 507 5 311 4.72e-62 206
Msa1162370 AT5G35715.1 30.310 452 277 10 77 510 3 434 1.08e-61 209
Msa1162370 AT1G33720.4 31.250 400 223 11 135 510 2 373 7.50e-61 205
Msa1162370 AT1G33720.3 31.250 400 223 11 135 510 2 373 7.50e-61 205
Msa1162370 AT1G33720.5 31.250 400 223 11 135 510 2 373 7.50e-61 205
Msa1162370 AT1G33730.1 32.115 383 230 10 138 507 1 366 1.25e-60 204
Msa1162370 AT1G33730.2 32.115 383 230 10 138 507 1 366 1.25e-60 204
Msa1162370 AT2G46660.1 28.782 476 301 12 42 505 72 521 2.19e-60 207
Msa1162370 AT3G61880.1 29.769 477 304 12 42 507 68 524 5.02e-60 207
Msa1162370 AT3G61880.2 29.769 477 304 12 42 507 68 524 1.20e-59 206
Msa1162370 AT1G13710.1 29.462 465 296 11 54 510 70 510 1.67e-58 202
Msa1162370 AT5G36220.2 34.018 341 202 7 167 505 22 341 2.07e-58 197
Msa1162370 AT5G24960.2 33.424 368 238 5 35 399 28 391 8.87e-58 197
Msa1162370 AT1G13080.2 32.134 389 231 12 142 513 12 384 5.99e-57 194
Msa1162370 AT5G05260.2 28.008 532 341 17 12 515 7 524 2.00e-56 197
Msa1162370 AT3G10560.1 28.515 505 333 14 12 505 18 505 1.57e-55 194
Msa1162370 AT1G01190.1 29.228 479 297 15 42 506 75 525 3.20e-55 194
Msa1162370 AT1G01190.2 29.228 479 297 15 42 506 80 530 3.85e-55 194
Msa1162370 AT1G33720.2 29.551 423 225 12 135 510 2 398 4.00e-55 190
Msa1162370 AT4G39950.1 28.958 518 331 17 10 506 24 525 1.95e-54 192
Msa1162370 AT5G09970.1 29.006 493 302 16 42 513 71 536 3.49e-54 191
Msa1162370 AT4G39950.2 28.958 518 331 17 10 506 64 565 3.69e-54 192
Msa1162370 AT5G05260.1 28.736 522 318 17 12 515 7 492 8.71e-54 189
Msa1162370 AT2G22330.1 28.240 517 337 17 10 506 25 527 9.58e-54 190
Msa1162370 AT2G22330.2 28.240 517 337 17 10 506 48 550 1.18e-53 190
Msa1162370 AT1G74110.1 27.977 529 332 17 8 510 29 534 2.34e-53 189
Msa1162370 AT1G79370.1 28.125 544 336 16 7 515 8 531 9.39e-53 187
Msa1162370 AT5G04630.1 27.907 516 328 17 9 505 11 501 1.38e-52 186
Msa1162370 AT3G61040.2 31.989 372 234 9 39 401 32 393 1.52e-52 183
Msa1162370 AT3G26180.2 37.121 264 138 6 254 510 123 365 9.30e-51 177
Msa1162370 AT3G26180.2 37.838 74 46 0 37 110 27 100 3.68e-11 65.5
Msa1162370 AT1G64940.1 28.249 531 322 14 12 510 3 506 5.46e-50 179
Msa1162370 AT2G25160.2 31.298 393 251 12 12 387 4 394 2.01e-49 176
Msa1162370 AT2G45580.3 31.507 365 222 8 50 397 48 401 1.23e-48 173
Msa1162370 AT3G25180.2 29.648 398 269 8 1 390 1 395 7.08e-47 168
Msa1162370 AT1G58260.1 26.880 532 325 15 14 507 9 514 7.99e-47 171
Msa1162370 AT2G30490.1 29.148 446 283 13 68 498 62 489 1.33e-46 170
Msa1162370 AT5G04660.1 27.912 455 295 15 65 505 69 504 2.80e-46 169
Msa1162370 AT1G64930.1 26.518 494 331 11 35 510 27 506 2.37e-44 164
Msa1162370 AT1G16410.1 25.145 517 359 12 9 505 12 520 1.36e-43 162
Msa1162370 AT3G10570.1 26.652 454 297 16 67 505 73 505 4.35e-43 160
Msa1162370 AT1G64950.1 27.866 506 308 13 35 510 27 505 3.10e-42 158
Msa1162370 AT2G12190.1 27.273 506 313 13 35 510 27 507 4.38e-41 155
Msa1162370 AT1G16400.1 26.046 526 349 14 7 506 9 520 5.77e-41 155
Msa1162370 AT1G11600.1 25.341 513 348 13 12 505 6 502 1.18e-38 148
Msa1162370 AT3G03470.1 24.857 523 341 13 6 503 4 499 1.52e-34 136
Msa1162370 AT3G53290.1 28.074 431 259 10 93 510 11 403 2.08e-34 134
Msa1162370 AT5G25900.1 24.180 488 325 12 24 492 27 488 7.31e-34 134
Msa1162370 AT1G13090.1 30.116 259 175 3 36 291 24 279 4.25e-33 128
Msa1162370 AT5G61320.1 24.726 457 307 10 64 511 58 486 1.62e-32 130
Msa1162370 AT1G64900.1 27.328 494 305 13 47 512 38 505 1.65e-31 127
Msa1162370 AT5G35917.1 23.647 499 301 16 41 515 43 485 1.16e-28 119
Msa1162370 AT1G16410.2 23.573 403 288 8 9 392 12 413 1.48e-28 118
Msa1162370 AT3G53130.1 24.444 450 290 18 69 497 106 526 1.25e-26 114
Msa1162370 AT2G26170.1 22.532 466 309 13 42 479 47 488 2.34e-24 107
Msa1162370 AT5G52400.1 23.319 476 306 16 54 510 84 519 3.95e-24 106
Msa1162370 AT1G24540.1 23.529 442 281 13 79 489 84 499 1.90e-23 103
Msa1162370 AT4G39510.1 23.988 346 224 10 170 494 162 489 2.56e-23 103
Msa1162370 AT4G15110.1 28.346 254 157 7 265 499 320 567 6.40e-23 102
Msa1162370 AT4G32170.1 23.614 415 276 13 95 489 89 482 3.11e-22 100
Msa1162370 AT2G45560.2 26.000 300 200 11 9 295 9 299 8.29e-22 96.7
Msa1162370 AT1G31800.1 21.719 442 307 12 71 497 139 556 8.71e-22 99.4
Msa1162370 AT1G57750.1 22.330 515 330 18 6 490 2 476 9.43e-22 99.0
Msa1162370 AT3G26125.1 24.138 493 288 17 44 483 46 505 1.11e-21 99.0
Msa1162370 AT1G13140.1 23.611 432 282 11 79 483 87 497 1.35e-21 98.6
Msa1162370 AT1G19630.1 26.250 240 156 4 251 487 231 452 5.92e-21 96.3
Msa1162370 AT3G19270.2 21.429 490 332 11 6 488 2 445 2.25e-20 94.4
Msa1162370 AT4G20235.1 28.405 257 149 7 13 264 8 234 3.79e-20 92.0
Msa1162370 AT4G39490.1 21.805 532 330 19 8 490 2 496 3.82e-20 94.0
Msa1162370 AT5G24910.1 21.739 437 303 13 64 483 91 505 5.12e-20 93.6
Msa1162370 AT1G47620.1 24.088 274 184 7 234 494 237 499 7.74e-20 93.2
Msa1162370 AT2G45560.3 29.082 196 130 6 9 198 9 201 8.66e-20 89.0
Msa1162370 AT1G13150.1 24.941 421 256 13 96 483 97 490 1.17e-19 92.4
Msa1162370 AT1G19630.3 26.068 234 152 4 251 481 231 446 3.82e-19 90.5
Msa1162370 AT1G65340.1 25.000 260 172 7 241 490 237 483 4.68e-19 90.5
Msa1162370 AT5G52320.2 24.903 257 171 7 241 488 237 480 1.16e-18 89.4
Msa1162370 AT2G29090.2 22.826 460 303 12 37 488 46 461 1.18e-18 89.4
Msa1162370 AT2G29090.1 22.826 460 303 12 37 488 46 461 1.18e-18 89.4
Msa1162370 AT5G52320.1 24.903 257 171 7 241 488 237 480 1.19e-18 89.4
Msa1162370 AT2G26170.2 25.106 235 158 5 247 479 187 405 1.78e-18 88.2
Msa1162370 AT2G26710.1 29.091 220 134 5 267 479 280 484 4.67e-18 87.4
Msa1162370 AT4G19230.1 21.932 497 315 15 4 486 2 439 6.13e-18 87.0
Msa1162370 AT2G23180.1 24.823 282 178 8 229 490 225 492 6.47e-18 87.0
Msa1162370 AT1G55940.1 23.577 492 305 17 13 479 18 463 7.14e-18 86.7
Msa1162370 AT1G13140.2 23.653 427 262 13 79 483 87 471 9.33e-18 86.7
Msa1162370 AT2G44890.1 23.288 511 327 19 1 483 7 480 1.03e-17 86.3
Msa1162370 AT5G02900.1 25.000 272 175 8 240 494 204 463 1.05e-17 86.3
Msa1162370 AT5G08250.2 23.724 333 211 10 188 490 201 520 1.24e-17 86.3
Msa1162370 AT4G39500.2 21.773 519 319 17 12 489 23 495 1.36e-17 86.3
Msa1162370 AT1G55940.2 23.185 496 310 17 13 483 18 467 1.63e-17 85.9
Msa1162370 AT5G08250.1 23.724 333 211 10 188 490 139 458 1.79e-17 85.5
Msa1162370 AT3G14630.1 25.114 438 282 17 59 483 77 481 2.63e-17 85.1
Msa1162370 AT4G39500.1 23.693 287 185 7 218 489 178 445 3.35e-17 84.7
Msa1162370 AT3G14630.2 25.114 438 282 17 59 483 132 536 3.60e-17 85.1
Msa1162370 AT3G14620.1 23.220 323 223 9 165 483 187 488 4.20e-17 84.7
Msa1162370 AT3G14610.1 24.085 328 222 9 166 483 175 485 4.88e-17 84.3
Msa1162370 AT3G53305.1 31.818 154 85 4 352 501 183 320 7.30e-17 82.4
Msa1162370 AT1G19630.2 27.933 179 124 2 251 426 231 407 1.69e-16 82.4
Msa1162370 AT2G45970.1 21.921 479 328 14 44 492 30 492 2.83e-16 82.0
Msa1162370 AT4G39480.1 23.656 279 185 6 229 489 224 492 4.48e-16 81.3
Msa1162370 AT2G45510.1 20.949 506 345 14 1 483 7 480 4.53e-16 81.3
Msa1162370 AT1G57750.2 22.030 463 301 17 6 438 2 434 6.00e-16 80.5
Msa1162370 AT3G14680.1 22.807 342 230 8 151 483 169 485 6.37e-16 80.9
Msa1162370 AT3G50660.1 28.139 231 148 4 263 488 275 492 1.21e-15 80.1
Msa1162370 AT1G05160.2 21.681 452 288 17 34 464 39 445 1.28e-15 79.7
Msa1162370 AT1G05160.1 21.681 452 288 17 34 464 39 445 1.28e-15 79.7
Msa1162370 AT4G00360.1 22.407 482 323 17 44 492 30 493 1.64e-15 79.7
Msa1162370 AT3G48520.1 20.281 498 335 17 10 480 7 469 1.66e-15 79.7
Msa1162370 AT1G11680.1 27.848 237 151 7 254 483 235 458 1.84e-15 79.3
Msa1162370 AT2G21910.1 26.103 272 181 9 230 490 224 486 1.85e-15 79.3
Msa1162370 AT2G29090.3 24.121 199 131 2 294 488 184 366 2.10e-15 78.6
Msa1162370 AT5G23190.1 21.515 330 219 9 188 490 204 520 4.27e-15 78.6
Msa1162370 AT1G01600.1 22.811 434 287 15 86 492 83 495 5.55e-15 78.2
Msa1162370 AT3G01900.1 23.113 424 289 15 79 490 72 470 5.89e-15 77.8
Msa1162370 AT5G35920.1 31.944 144 86 4 364 505 7 140 1.29e-14 72.0
Msa1162370 AT3G44970.1 21.941 474 291 11 32 479 27 447 1.80e-14 76.3
Msa1162370 AT5G38970.1 20.961 458 307 14 41 489 35 446 4.22e-14 75.1
Msa1162370 AT3G14640.1 21.495 321 219 10 172 483 191 487 5.21e-14 74.7
Msa1162370 AT3G14640.2 21.495 321 219 10 172 483 213 509 5.83e-14 74.7
Msa1162370 AT5G38450.1 22.819 447 298 15 53 483 74 489 6.01e-14 74.7
Msa1162370 AT5G38970.2 23.571 280 187 7 214 489 109 365 8.61e-13 70.5
Msa1162370 AT5G38970.4 23.571 280 187 7 214 489 109 365 8.61e-13 70.5
Msa1162370 AT4G27710.1 20.814 442 293 16 59 480 83 487 1.85e-12 70.1
Msa1162370 AT5G05690.1 24.885 217 142 3 276 489 251 449 2.34e-12 69.7
Msa1162370 AT5G63450.1 20.121 497 344 16 7 480 6 472 3.55e-12 68.9
Msa1162370 AT1G34540.1 20.523 497 355 15 12 491 5 478 6.34e-12 68.2
Msa1162370 AT5G63450.2 20.121 497 344 16 7 480 64 530 6.37e-12 68.6
Msa1162370 AT5G05690.3 24.885 217 142 3 276 489 132 330 6.51e-12 67.4
Msa1162370 AT2G42850.1 24.747 198 130 2 294 488 281 462 2.00e-11 66.6
Msa1162370 AT1G75130.1 23.377 231 160 4 255 483 261 476 6.05e-11 65.1
Msa1162370 AT3G14660.2 20.000 325 228 8 167 483 39 339 6.23e-11 64.7

Find 127 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAATATTGAAGAAATTA+AGG 0.185152 7_4:+53055473 Msa1162370:CDS
TGAAAATAGGTCAACGGATT+TGG 0.216042 7_4:+53053367 Msa1162370:CDS
CTGCCCCATATGGTCCTTAT+TGG 0.241258 7_4:+53053225 Msa1162370:CDS
CACTAATCACAAACTTAAAA+AGG 0.243433 7_4:-53056030 None:intergenic
AAGTTTGACTTGTTTGGTTA+TGG 0.248962 7_4:+53053557 Msa1162370:CDS
TTTAGCTACCGACCCCAATT+TGG 0.275371 7_4:+53053161 Msa1162370:CDS
CATTTCTATACACTTCTAAT+AGG 0.278853 7_4:-53053691 None:intergenic
CCAAGATTGAGCTGAATTAA+AGG 0.279817 7_4:-53053068 None:intergenic
GAAAGTGTTTGGAATGATTT+TGG 0.284585 7_4:-53053032 None:intergenic
CCTATTATGGGTAGTGATCT+TGG 0.293616 7_4:-53052981 None:intergenic
AAAGGATTAAAACAAGTAAC+AGG 0.296432 7_4:-53056012 None:intergenic
TCATGAACATGTGAATAAAA+TGG 0.305008 7_4:+53055789 Msa1162370:CDS
GGTGAAGTACTTGGACCTTT+GGG 0.307951 7_4:+53053533 Msa1162370:CDS
CATACGACACAAGATGTTAT+TGG 0.309712 7_4:-53053411 None:intergenic
TTGGGGAAGTTTGACTTGTT+TGG 0.311734 7_4:+53053551 Msa1162370:CDS
AATCATGAGAGGATCCAAAT+TGG 0.315692 7_4:-53053175 None:intergenic
GAAAATAGGTCAACGGATTT+GGG 0.321356 7_4:+53053368 Msa1162370:CDS
AGGTGGTGATAAGGTTGATA+TGG 0.338752 7_4:+53055939 Msa1162370:CDS
CCTTTAATTCAGCTCAATCT+TGG 0.340291 7_4:+53053068 Msa1162370:CDS
TCCTAAGGTTATTCAATGTT+TGG 0.342500 7_4:+53053472 Msa1162370:CDS
CATATTGGTGAGAAAGTGTT+TGG 0.349270 7_4:-53053043 None:intergenic
ATGGTGAAGGTGGCCTATTA+TGG 0.349927 7_4:-53052994 None:intergenic
CCAAGATCACTACCCATAAT+AGG 0.356020 7_4:+53052981 Msa1162370:CDS
AGTTTGACTTGTTTGGTTAT+GGG 0.364559 7_4:+53053558 Msa1162370:CDS
GGTAGTGATCTTGGGCATGG+TGG 0.364631 7_4:-53052972 None:intergenic
AGTGATCTTGGGCATGGTGG+GGG 0.366933 7_4:-53052969 None:intergenic
AATTAAGCCATGGCATTTGA+TGG 0.368244 7_4:+53052843 None:intergenic
AGGTTATTCAATGTTTGGTT+CGG 0.368801 7_4:+53053477 Msa1162370:CDS
GGTTATTCAATGTTTGGTTC+GGG 0.369624 7_4:+53053478 Msa1162370:CDS
TTCACACATGCTTGTAAGTA+AGG 0.376385 7_4:-53055559 None:intergenic
GGGTGAAGTACTTGGACCTT+TGG 0.381309 7_4:+53053532 Msa1162370:CDS
TAGGTCAACGGATTTGGGTT+TGG 0.382700 7_4:+53053373 Msa1162370:CDS
TGTAGGAGCTAAATTGAGTA+TGG 0.388977 7_4:+53053511 Msa1162370:CDS
CTCTCAGGTATATACTCCTC+AGG 0.389071 7_4:-53055730 None:intergenic
CAAACACTTTCTCACCAATA+TGG 0.390068 7_4:+53053044 Msa1162370:CDS
AGGTATATTCCATTTGGATT+TGG 0.394894 7_4:+53055826 Msa1162370:CDS
TAGTGATCTTGGGCATGGTG+GGG 0.399744 7_4:-53052970 None:intergenic
TGGTTCATCACTTGCTTTGA+CGG 0.400813 7_4:+53055864 Msa1162370:CDS
TCAATGTATATGCCATTATG+AGG 0.403164 7_4:+53055686 Msa1162370:CDS
TTTGGTAGGAGGGGTTGTCC+TGG 0.406350 7_4:+53055844 Msa1162370:CDS
ATCATGAGAGGATCCAAATT+GGG 0.408310 7_4:-53053174 None:intergenic
TGGTATGCTCAAGTGAAAAT+AGG 0.410603 7_4:+53053354 Msa1162370:CDS
GCTGAATTAAAGGACCATAT+TGG 0.415830 7_4:-53053058 None:intergenic
AATCTCCAATAAGGACCATA+TGG 0.416657 7_4:-53053230 None:intergenic
AAATTTGGAGCTACCATTTG+TGG 0.416710 7_4:-53052943 None:intergenic
AACAATAAACGAACCACAAA+TGG 0.419404 7_4:+53052930 Msa1162370:CDS
TATTTCATCACTGCCCCATA+TGG 0.421612 7_4:+53053215 Msa1162370:CDS
CTATTATGGGTAGTGATCTT+GGG 0.423625 7_4:-53052980 None:intergenic
GAAAATTAAAGGTGGTGATA+AGG 0.426987 7_4:+53055930 Msa1162370:CDS
TAAAATATTGAAGAAATTAA+GGG 0.431095 7_4:+53055474 Msa1162370:CDS
GTAGTGATCTTGGGCATGGT+GGG 0.436094 7_4:-53052971 None:intergenic
GATAAGGTTGATATGGAAGA+AGG 0.439862 7_4:+53055946 Msa1162370:CDS
TGATTGTGGGTCCCTCATAA+TGG 0.442953 7_4:-53055698 None:intergenic
TGGTGAAGGTGGCCTATTAT+GGG 0.444457 7_4:-53052993 None:intergenic
GCTGAGATTAATGATGTTGT+AGG 0.449417 7_4:+53055496 Msa1162370:CDS
AAAATACAATATTGATCCTA+AGG 0.459383 7_4:+53053457 Msa1162370:CDS
CCATTTGGATTTGGTAGGAG+GGG 0.464464 7_4:+53055835 Msa1162370:CDS
TTGGTATCACTGAGCCTAGA+TGG 0.464599 7_4:-53053013 None:intergenic
CAGGGTTGACCCATGATTGT+GGG 0.465449 7_4:-53055711 None:intergenic
TTCCATTTGGATTTGGTAGG+AGG 0.468830 7_4:+53055833 Msa1162370:CDS
TGTTGTAGGCACTAATAGAT+TGG 0.469590 7_4:+53055510 Msa1162370:CDS
TTGAGTATGGGTGAAGTACT+TGG 0.473438 7_4:+53053524 Msa1162370:CDS
TCTCATGATTACTTATACGA+AGG 0.475222 7_4:+53053188 Msa1162370:CDS
TCAGGGTTGACCCATGATTG+TGG 0.475241 7_4:-53055712 None:intergenic
ATGATATAAAAGCTCATACT+AGG 0.495460 7_4:+53055656 Msa1162370:CDS
ATAGGCCACCTTCACCATCT+AGG 0.500250 7_4:+53052999 Msa1162370:CDS
CCCCTCCTACCAAATCCAAA+TGG 0.508366 7_4:-53055835 None:intergenic
ATCTCCAATAAGGACCATAT+GGG 0.511571 7_4:-53053229 None:intergenic
AGATTCTTAGTAGGTGGTGA+TGG 0.516873 7_4:+53055751 Msa1162370:CDS
GTTAACAAGGAATGATATCA+AGG 0.521550 7_4:+53053730 Msa1162370:CDS
GATGATTGTCTAAGAGCAAA+CGG 0.523159 7_4:-53055610 None:intergenic
CATCTTGTGTCGTATGAGCA+TGG 0.525390 7_4:+53053418 Msa1162370:CDS
ACCAAACATTGAATAACCTT+AGG 0.527007 7_4:-53053473 None:intergenic
TTATGAGGGACCCACAATCA+TGG 0.529117 7_4:+53055701 Msa1162370:CDS
TCCATTTGGATTTGGTAGGA+GGG 0.530076 7_4:+53055834 Msa1162370:CDS
ATAAGGTTGATATGGAAGAA+GGG 0.540089 7_4:+53055947 Msa1162370:CDS
CCACCTACTAAGAATCTCTC+AGG 0.542179 7_4:-53055745 None:intergenic
GTTGTTCATTATCTCAGCCA+TGG 0.545546 7_4:-53055449 None:intergenic
TTGTTTGGCAACTTGTGCAT+TGG 0.552346 7_4:-53053114 None:intergenic
AATTAGCAAAGCTAGAAGAA+AGG 0.552897 7_4:-53052892 None:intergenic
CTAAGAGCAAACGGTGCCGT+TGG 0.554911 7_4:-53055601 None:intergenic
GGATTGTCAAGGAGACATGA+TGG 0.559468 7_4:+53053664 Msa1162370:CDS
TATGAGGGACCCACAATCAT+GGG 0.565994 7_4:+53055702 Msa1162370:CDS
GTTCGGGAGTTTATGCATGT+AGG 0.568378 7_4:+53053494 Msa1162370:CDS
ATGGGTAGTGATCTTGGGCA+TGG 0.568379 7_4:-53052975 None:intergenic
ATCTTGTGTCGTATGAGCAT+GGG 0.573586 7_4:+53053419 Msa1162370:CDS
ACGCTGAAGTGAGGTTAACA+AGG 0.581459 7_4:+53053717 Msa1162370:CDS
TTACTATCTAGCTCTCAACT+TGG 0.583489 7_4:+53053278 Msa1162370:CDS
CATCCTCAGTGGCAATGCAA+TGG 0.583645 7_4:+53055425 Msa1162370:CDS
CTCAAGTGAAAATAGGTCAA+CGG 0.584779 7_4:+53053361 Msa1162370:CDS
TCAAAAGATTGCAAAATCAA+CGG 0.589875 7_4:+53055631 Msa1162370:CDS
ATACCTGAGAGATTCTTAGT+AGG 0.590448 7_4:+53055742 Msa1162370:CDS
ATATTCCATTTGGATTTGGT+AGG 0.597017 7_4:+53055830 Msa1162370:CDS
CCTGAGAGATTCTTAGTAGG+TGG 0.603238 7_4:+53055745 Msa1162370:CDS
CTCATGATTACTTATACGAA+GGG 0.604652 7_4:+53053189 Msa1162370:CDS
GTGAAGTACTTGGACCTTTG+GGG 0.605990 7_4:+53053534 Msa1162370:CDS
GTAGGAGCTAAATTGAGTAT+GGG 0.608545 7_4:+53053512 Msa1162370:CDS
GGAGACAACTATAGAAGTTG+AGG 0.613036 7_4:-53053093 None:intergenic
GAAACTCTTGAAGTCTCTTG+TGG 0.614657 7_4:+53053334 Msa1162370:CDS
CTGAGCCTAGATGGTGAAGG+TGG 0.618404 7_4:-53053004 None:intergenic
CAATGTATATGCCATTATGA+GGG 0.619616 7_4:+53055687 Msa1162370:CDS
TTCGTATAAGTAATCATGAG+AGG 0.622233 7_4:-53053186 None:intergenic
TTTGAATGGAAAATTAAAGG+TGG 0.628843 7_4:+53055922 Msa1162370:CDS
GAAATGAAAACGCTGAAGTG+AGG 0.632444 7_4:+53053708 Msa1162370:CDS
AGTAGCACCATCAAATGCCA+TGG 0.633777 7_4:-53052850 None:intergenic
TCTCAGGTATATACTCCTCA+GGG 0.634062 7_4:-53055729 None:intergenic
ATAAACACTGAGGATTGTCA+AGG 0.637019 7_4:+53053653 Msa1162370:CDS
GAGAGGATCCAAATTGGGGT+CGG 0.638201 7_4:-53053169 None:intergenic
AACAAGTCAAACTTCCCCAA+AGG 0.643630 7_4:-53053548 None:intergenic
TCATGAGAGGATCCAAATTG+GGG 0.645695 7_4:-53053173 None:intergenic
GTAGGTGGTGATGGAATCAA+CGG 0.647370 7_4:+53055760 Msa1162370:CDS
GAACATGTGAATAAAATGGA+TGG 0.648950 7_4:+53055793 Msa1162370:CDS
TCTCCAATAAGGACCATATG+GGG 0.649972 7_4:-53053228 None:intergenic
TTACTTACAAGCATGTGTGA+AGG 0.655939 7_4:+53055561 Msa1162370:CDS
TCACTGAGCCTAGATGGTGA+AGG 0.674047 7_4:-53053007 None:intergenic
GGTCCATTGCATTGCCACTG+AGG 0.680156 7_4:-53055428 None:intergenic
AAAAGCTTACGAAAATAGTG+GGG 0.680770 7_4:+53053582 Msa1162370:CDS
AAAGCTTACGAAAATAGTGG+GGG 0.683296 7_4:+53053583 Msa1162370:CDS
AAGGATTAAAACAAGTAACA+GGG 0.684426 7_4:-53056011 None:intergenic
GTAACAGGGTAACAAACTAG+AGG 0.685383 7_4:-53055997 None:intergenic
AGTGGCAATGCAATGGACCA+TGG 0.686918 7_4:+53055432 Msa1162370:CDS
GTCAAAGCAAGTGATGAACC+AGG 0.687036 7_4:-53055862 None:intergenic
AGTGCTAAGACTTCATCCAA+CGG 0.717609 7_4:+53055585 Msa1162370:CDS
TGGAACAGACACATCCTCAG+TGG 0.719420 7_4:+53055414 Msa1162370:CDS
ACAATCATGGGTCAACCCTG+AGG 0.735291 7_4:+53055714 Msa1162370:CDS
AGGATGTGTCTGTTCCAGCG+AGG 0.750973 7_4:-53055408 None:intergenic
TGAAGAGAGAATAAACACTG+AGG 0.766168 7_4:+53053643 Msa1162370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAAAAAGAAAAGAAT+TGG + chr7_4:53054609-53054628 Msa1162370:intron 10.0%
!!! ATAACAGTATTTTTTAAATA+AGG + chr7_4:53054783-53054802 Msa1162370:intron 10.0%
!!! TAACAGTATTTTTTAAATAA+GGG + chr7_4:53054784-53054803 Msa1162370:intron 10.0%
!!! TTTTTAATATATCTAAACAA+TGG + chr7_4:53054886-53054905 Msa1162370:intron 10.0%
!! GTTAAAATTATGAATTATAT+AGG - chr7_4:53055250-53055269 None:intergenic 10.0%
!!! TTAATTTCTTCAATATTTTA+GGG - chr7_4:53055474-53055493 None:intergenic 10.0%
!! TAAAATATTGAAGAAATTAA+GGG + chr7_4:53055474-53055493 Msa1162370:CDS 10.0%
!! AAATGAGATGATAAATATAA+TGG - chr7_4:53053785-53053804 None:intergenic 15.0%
!!! TACATTTTTTTTGTTTCTAT+AGG + chr7_4:53053826-53053845 Msa1162370:intron 15.0%
!! AATAATTAAATTCCGTTATT+TGG + chr7_4:53054096-53054115 Msa1162370:intron 15.0%
!! TTAGATATATTAAAAAGTGA+TGG - chr7_4:53054882-53054901 None:intergenic 15.0%
!! TAAATCATTTATACATATCT+TGG + chr7_4:53055204-53055223 Msa1162370:intron 15.0%
!! TTTAGTAAAATATAGATGTT+GGG - chr7_4:53055272-53055291 None:intergenic 15.0%
!!! TTTTAGTAAAATATAGATGT+TGG - chr7_4:53055273-53055292 None:intergenic 15.0%
!!! TATATTTTACTAAAATCAGA+AGG + chr7_4:53055278-53055297 Msa1162370:intron 15.0%
!!! ATATTTTACTAAAATCAGAA+GGG + chr7_4:53055279-53055298 Msa1162370:intron 15.0%
!!! CTTAATTTCTTCAATATTTT+AGG - chr7_4:53055475-53055494 None:intergenic 15.0%
!! CTAAAATATTGAAGAAATTA+AGG + chr7_4:53055473-53055492 Msa1162370:CDS 15.0%
!! AAAATACAATATTGATCCTA+AGG + chr7_4:53053457-53053476 Msa1162370:CDS 20.0%
!!! TTTTTTGCAAATCCAAATAA+CGG - chr7_4:53054111-53054130 None:intergenic 20.0%
!! AAAAAATGAATGGAATGAAA+TGG + chr7_4:53054125-53054144 Msa1162370:intron 20.0%
!! AGAAAAGAATTGGTAAAAAT+TGG + chr7_4:53054619-53054638 Msa1162370:intron 20.0%
!! GAAAAGAATTGGTAAAAATT+GGG + chr7_4:53054620-53054639 Msa1162370:intron 20.0%
!!! TTTTTAAATAAGGGTAGAAA+TGG + chr7_4:53054793-53054812 Msa1162370:intron 20.0%
!!! TGTTTTGAATGGAAAATTAA+AGG + chr7_4:53055919-53055938 Msa1162370:CDS 20.0%
!! TTTTTCATGAATCTCCAATA+AGG - chr7_4:53053242-53053261 None:intergenic 25.0%
!!! ATTGTATTTTTGAAAGCATG+TGG - chr7_4:53053447-53053466 None:intergenic 25.0%
! AAAAAGCTTACGAAAATAGT+GGG + chr7_4:53053581-53053600 Msa1162370:CDS 25.0%
! CATTTCTATACACTTCTAAT+AGG - chr7_4:53053694-53053713 None:intergenic 25.0%
! GAAAAGAAAAACAACTTACA+AGG - chr7_4:53053763-53053782 None:intergenic 25.0%
!!! AGTAGGTTAACTTTTTTGAA+GGG - chr7_4:53053962-53053981 None:intergenic 25.0%
!!! AAGTAGGTTAACTTTTTTGA+AGG - chr7_4:53053963-53053982 None:intergenic 25.0%
! TTGGATTTGCAAAAAATGAA+TGG + chr7_4:53054115-53054134 Msa1162370:intron 25.0%
! TGAAAATTTGAAGGATTGAA+TGG - chr7_4:53054179-53054198 None:intergenic 25.0%
!!! AAGTCATGTGTTTTAATTTG+AGG - chr7_4:53054283-53054302 None:intergenic 25.0%
! TTAAAAGAACACGAGAATTT+GGG - chr7_4:53054364-53054383 None:intergenic 25.0%
! ATTAAAAGAACACGAGAATT+TGG - chr7_4:53054365-53054384 None:intergenic 25.0%
!! AATCAAAAGCTTTGATACAA+GGG - chr7_4:53054390-53054409 None:intergenic 25.0%
!! AAATCAAAAGCTTTGATACA+AGG - chr7_4:53054391-53054410 None:intergenic 25.0%
!! TTGCTTTCTTTAAGTTCAAT+TGG + chr7_4:53054429-53054448 Msa1162370:intron 25.0%
!! TGCTTTCTTTAAGTTCAATT+GGG + chr7_4:53054430-53054449 Msa1162370:intron 25.0%
!!! TCCATCAGATTTTTTTTTAG+AGG + chr7_4:53054670-53054689 Msa1162370:intron 25.0%
!! TCCTCTAAAAAAAAATCTGA+TGG - chr7_4:53054674-53054693 None:intergenic 25.0%
! AATATATCTAAACAATGGAG+TGG + chr7_4:53054891-53054910 Msa1162370:intron 25.0%
! ATATATCTAAACAATGGAGT+GGG + chr7_4:53054892-53054911 Msa1162370:intron 25.0%
! GAATTATATAGGATGAAATC+AGG - chr7_4:53055239-53055258 None:intergenic 25.0%
! TCAAAAGATTGCAAAATCAA+CGG + chr7_4:53055631-53055650 Msa1162370:CDS 25.0%
! ATGATATAAAAGCTCATACT+AGG + chr7_4:53055656-53055675 Msa1162370:CDS 25.0%
! TCATGAACATGTGAATAAAA+TGG + chr7_4:53055789-53055808 Msa1162370:CDS 25.0%
!!! GATTTTAGGTATATTCCATT+TGG + chr7_4:53055820-53055839 Msa1162370:CDS 25.0%
!!! CATTGATTCAATGTTTTGAA+TGG + chr7_4:53055908-53055927 Msa1162370:CDS 25.0%
! TTTGAATGGAAAATTAAAGG+TGG + chr7_4:53055922-53055941 Msa1162370:CDS 25.0%
! AAGGATTAAAACAAGTAACA+GGG - chr7_4:53056014-53056033 None:intergenic 25.0%
! AAAGGATTAAAACAAGTAAC+AGG - chr7_4:53056015-53056034 None:intergenic 25.0%
AATTAGCAAAGCTAGAAGAA+AGG - chr7_4:53052895-53052914 None:intergenic 30.0%
AACAATAAACGAACCACAAA+TGG + chr7_4:53052930-53052949 Msa1162370:CDS 30.0%
!!! GAAAGTGTTTGGAATGATTT+TGG - chr7_4:53053035-53053054 None:intergenic 30.0%
!!! ATGTGTTTTCATGACTTGTT+TGG - chr7_4:53053132-53053151 None:intergenic 30.0%
TTCGTATAAGTAATCATGAG+AGG - chr7_4:53053189-53053208 None:intergenic 30.0%
TCTCATGATTACTTATACGA+AGG + chr7_4:53053188-53053207 Msa1162370:CDS 30.0%
CTCATGATTACTTATACGAA+GGG + chr7_4:53053189-53053208 Msa1162370:CDS 30.0%
TCCTAAGGTTATTCAATGTT+TGG + chr7_4:53053472-53053491 Msa1162370:CDS 30.0%
ACCAAACATTGAATAACCTT+AGG - chr7_4:53053476-53053495 None:intergenic 30.0%
AGGTTATTCAATGTTTGGTT+CGG + chr7_4:53053477-53053496 Msa1162370:CDS 30.0%
!! AAGTTTGACTTGTTTGGTTA+TGG + chr7_4:53053557-53053576 Msa1162370:CDS 30.0%
!! AGTTTGACTTGTTTGGTTAT+GGG + chr7_4:53053558-53053577 Msa1162370:CDS 30.0%
GAAAAAGCTTACGAAAATAG+TGG + chr7_4:53053580-53053599 Msa1162370:CDS 30.0%
AAAAGCTTACGAAAATAGTG+GGG + chr7_4:53053582-53053601 Msa1162370:CDS 30.0%
! GAATTTGACAAGATTTTGGA+AGG + chr7_4:53053605-53053624 Msa1162370:CDS 30.0%
GTTAACAAGGAATGATATCA+AGG + chr7_4:53053730-53053749 Msa1162370:CDS 30.0%
! ATGCGCTTAGAATTTTATTG+AGG + chr7_4:53053853-53053872 Msa1162370:intron 30.0%
!!! CTTGTTTTGTCACTTATTTG+TGG - chr7_4:53053898-53053917 None:intergenic 30.0%
!! ATTGGTGTTAGATGACAATA+TGG + chr7_4:53053995-53054014 Msa1162370:intron 30.0%
GATGACAATATGGCTAAAAT+TGG + chr7_4:53054005-53054024 Msa1162370:intron 30.0%
ATCAATCTAAACATAGCCTT+AGG - chr7_4:53054042-53054061 None:intergenic 30.0%
TAAGGCTATGTTTAGATTGA+TGG + chr7_4:53054041-53054060 Msa1162370:intron 30.0%
TTTAGATTGATGGAATGTGA+TGG + chr7_4:53054051-53054070 Msa1162370:intron 30.0%
TGGAATGAAATGGAACATAA+TGG + chr7_4:53054135-53054154 Msa1162370:intron 30.0%
! TTGAGGAAAATGTTTTACGT+GGG - chr7_4:53054266-53054285 None:intergenic 30.0%
! TTTGAGGAAAATGTTTTACG+TGG - chr7_4:53054267-53054286 None:intergenic 30.0%
TTTAACTAGTCATTCCATTG+TGG - chr7_4:53054587-53054606 None:intergenic 30.0%
TTCATTGTTTGTAAGATGGA+CGG - chr7_4:53054845-53054864 None:intergenic 30.0%
CCATTTCATTGTTTGTAAGA+TGG - chr7_4:53054849-53054868 None:intergenic 30.0%
CCATCTTACAAACAATGAAA+TGG + chr7_4:53054846-53054865 Msa1162370:intron 30.0%
!! AAAAAGACTTAGGCTTTGTT+TGG - chr7_4:53054995-53055014 None:intergenic 30.0%
! AAACAAAGCCTAAGTCTTTT+TGG + chr7_4:53054994-53055013 Msa1162370:intron 30.0%
TCAAAAACATACTAAGCACA+TGG + chr7_4:53055330-53055349 Msa1162370:intron 30.0%
TACTTGTTTATGCAAATGCA+AGG + chr7_4:53055378-53055397 Msa1162370:intron 30.0%
TCAATGTATATGCCATTATG+AGG + chr7_4:53055686-53055705 Msa1162370:CDS 30.0%
CAATGTATATGCCATTATGA+GGG + chr7_4:53055687-53055706 Msa1162370:CDS 30.0%
GAACATGTGAATAAAATGGA+TGG + chr7_4:53055793-53055812 Msa1162370:CDS 30.0%
!! AAATGGATGGTGATGATTTT+AGG + chr7_4:53055806-53055825 Msa1162370:CDS 30.0%
AGGTATATTCCATTTGGATT+TGG + chr7_4:53055826-53055845 Msa1162370:CDS 30.0%
! ATATTCCATTTGGATTTGGT+AGG + chr7_4:53055830-53055849 Msa1162370:CDS 30.0%
GAAAATTAAAGGTGGTGATA+AGG + chr7_4:53055930-53055949 Msa1162370:CDS 30.0%
!! ATAAGGTTGATATGGAAGAA+GGG + chr7_4:53055947-53055966 Msa1162370:CDS 30.0%
! AAATTTGGAGCTACCATTTG+TGG - chr7_4:53052946-53052965 None:intergenic 35.0%
CTATTATGGGTAGTGATCTT+GGG - chr7_4:53052983-53053002 None:intergenic 35.0%
!! CATATTGGTGAGAAAGTGTT+TGG - chr7_4:53053046-53053065 None:intergenic 35.0%
CAAACACTTTCTCACCAATA+TGG + chr7_4:53053044-53053063 Msa1162370:CDS 35.0%
GCTGAATTAAAGGACCATAT+TGG - chr7_4:53053061-53053080 None:intergenic 35.0%
CCAAGATTGAGCTGAATTAA+AGG - chr7_4:53053071-53053090 None:intergenic 35.0%
CCTTTAATTCAGCTCAATCT+TGG + chr7_4:53053068-53053087 Msa1162370:CDS 35.0%
ATCATGAGAGGATCCAAATT+GGG - chr7_4:53053177-53053196 None:intergenic 35.0%
AATCATGAGAGGATCCAAAT+TGG - chr7_4:53053178-53053197 None:intergenic 35.0%
ATCTCCAATAAGGACCATAT+GGG - chr7_4:53053232-53053251 None:intergenic 35.0%
AATCTCCAATAAGGACCATA+TGG - chr7_4:53053233-53053252 None:intergenic 35.0%
!! TTACTATCTAGCTCTCAACT+TGG + chr7_4:53053278-53053297 Msa1162370:CDS 35.0%
TGGTATGCTCAAGTGAAAAT+AGG + chr7_4:53053354-53053373 Msa1162370:CDS 35.0%
CTCAAGTGAAAATAGGTCAA+CGG + chr7_4:53053361-53053380 Msa1162370:CDS 35.0%
! TGAAAATAGGTCAACGGATT+TGG + chr7_4:53053367-53053386 Msa1162370:CDS 35.0%
! GAAAATAGGTCAACGGATTT+GGG + chr7_4:53053368-53053387 Msa1162370:CDS 35.0%
CATACGACACAAGATGTTAT+TGG - chr7_4:53053414-53053433 None:intergenic 35.0%
! GGTTATTCAATGTTTGGTTC+GGG + chr7_4:53053478-53053497 Msa1162370:CDS 35.0%
TGTAGGAGCTAAATTGAGTA+TGG + chr7_4:53053511-53053530 Msa1162370:CDS 35.0%
GTAGGAGCTAAATTGAGTAT+GGG + chr7_4:53053512-53053531 Msa1162370:CDS 35.0%
AAAGCTTACGAAAATAGTGG+GGG + chr7_4:53053583-53053602 Msa1162370:CDS 35.0%
!! GATTTTGGAAGGTTTCTTGA+AGG + chr7_4:53053616-53053635 Msa1162370:CDS 35.0%
TGAAGAGAGAATAAACACTG+AGG + chr7_4:53053643-53053662 Msa1162370:CDS 35.0%
ATAAACACTGAGGATTGTCA+AGG + chr7_4:53053653-53053672 Msa1162370:CDS 35.0%
TTGAGGAAGTCACACAAATA+TGG + chr7_4:53053870-53053889 Msa1162370:intron 35.0%
!!! ACTTTTTTGAAGGGACTTGT+AGG - chr7_4:53053953-53053972 None:intergenic 35.0%
GACAATATGGCTAAAATTGG+TGG + chr7_4:53054008-53054027 Msa1162370:intron 35.0%
! TGAATGGAATGTGATGGAAT+GGG - chr7_4:53054163-53054182 None:intergenic 35.0%
! TTGAATGGAATGTGATGGAA+TGG - chr7_4:53054164-53054183 None:intergenic 35.0%
AAGGATTGAATGGAATGTGA+TGG - chr7_4:53054169-53054188 None:intergenic 35.0%
!! TCTCGTTTATCTGTTGTTTC+AGG + chr7_4:53054466-53054485 Msa1162370:intron 35.0%
ACATAAAGCACAAACACAAG+AGG - chr7_4:53054509-53054528 None:intergenic 35.0%
AGAATTGGTAAAAATTGGGC+TGG + chr7_4:53054624-53054643 Msa1162370:intron 35.0%
! TTTGGTGGGTAAATTGTTGA+AGG + chr7_4:53054723-53054742 Msa1162370:intron 35.0%
TGGAACATAATAGAACGAAG+CGG - chr7_4:53054967-53054986 None:intergenic 35.0%
!! TTAGGCTTTGTTTGGATTGA+TGG - chr7_4:53054987-53055006 None:intergenic 35.0%
! AAAGCCTAAGTCTTTTTGGA+GGG + chr7_4:53054998-53055017 Msa1162370:intron 35.0%
GCTGAGATTAATGATGTTGT+AGG + chr7_4:53055496-53055515 Msa1162370:CDS 35.0%
TGTTGTAGGCACTAATAGAT+TGG + chr7_4:53055510-53055529 Msa1162370:CDS 35.0%
!! GCTTGTAAGTAAGGCATTTT+TGG - chr7_4:53055553-53055572 None:intergenic 35.0%
TTCACACATGCTTGTAAGTA+AGG - chr7_4:53055562-53055581 None:intergenic 35.0%
TTACTTACAAGCATGTGTGA+AGG + chr7_4:53055561-53055580 Msa1162370:CDS 35.0%
GATGATTGTCTAAGAGCAAA+CGG - chr7_4:53055613-53055632 None:intergenic 35.0%
ATACCTGAGAGATTCTTAGT+AGG + chr7_4:53055742-53055761 Msa1162370:CDS 35.0%
!! GATAAGGTTGATATGGAAGA+AGG + chr7_4:53055946-53055965 Msa1162370:CDS 35.0%
CCTATTATGGGTAGTGATCT+TGG - chr7_4:53052984-53053003 None:intergenic 40.0%
CCAAGATCACTACCCATAAT+AGG + chr7_4:53052981-53053000 Msa1162370:CDS 40.0%
GGAGACAACTATAGAAGTTG+AGG - chr7_4:53053096-53053115 None:intergenic 40.0%
TTGTTTGGCAACTTGTGCAT+TGG - chr7_4:53053117-53053136 None:intergenic 40.0%
TCATGAGAGGATCCAAATTG+GGG - chr7_4:53053176-53053195 None:intergenic 40.0%
TATTTCATCACTGCCCCATA+TGG + chr7_4:53053215-53053234 Msa1162370:CDS 40.0%
TCTCCAATAAGGACCATATG+GGG - chr7_4:53053231-53053250 None:intergenic 40.0%
GAAACTCTTGAAGTCTCTTG+TGG + chr7_4:53053334-53053353 Msa1162370:CDS 40.0%
ATCTTGTGTCGTATGAGCAT+GGG + chr7_4:53053419-53053438 Msa1162370:CDS 40.0%
! TTGAGTATGGGTGAAGTACT+TGG + chr7_4:53053524-53053543 Msa1162370:CDS 40.0%
AACAAGTCAAACTTCCCCAA+AGG - chr7_4:53053551-53053570 None:intergenic 40.0%
!! TTGGGGAAGTTTGACTTGTT+TGG + chr7_4:53053551-53053570 Msa1162370:CDS 40.0%
! GGGGGAATTTGACAAGATTT+TGG + chr7_4:53053601-53053620 Msa1162370:CDS 40.0%
GAAATGAAAACGCTGAAGTG+AGG + chr7_4:53053708-53053727 Msa1162370:CDS 40.0%
TTGTCATCTAACACCAATCG+TGG - chr7_4:53053993-53054012 None:intergenic 40.0%
TATGGCTAAAATTGGTGGAG+AGG + chr7_4:53054013-53054032 Msa1162370:intron 40.0%
! ATTGATGGAATGTGATGGAG+TGG + chr7_4:53054056-53054075 Msa1162370:intron 40.0%
! TTGATGGAATGTGATGGAGT+GGG + chr7_4:53054057-53054076 Msa1162370:intron 40.0%
! ATTTTCATTCCCCCCCAATT+TGG + chr7_4:53054192-53054211 Msa1162370:intron 40.0%
! TTTTCATTCCCCCCCAATTT+GGG + chr7_4:53054193-53054212 Msa1162370:intron 40.0%
ATTGCATACACCCCAAATTG+GGG - chr7_4:53054207-53054226 None:intergenic 40.0%
CATTGCATACACCCCAAATT+GGG - chr7_4:53054208-53054227 None:intergenic 40.0%
CATGAAAGGTTGCAGCATAT+AGG - chr7_4:53054306-53054325 None:intergenic 40.0%
CTATATGCTGCAACCTTTCA+TGG + chr7_4:53054304-53054323 Msa1162370:intron 40.0%
CTGCAACCTTTCATGGTAAT+TGG + chr7_4:53054311-53054330 Msa1162370:intron 40.0%
GGGTTACCAATTACCATGAA+AGG - chr7_4:53054320-53054339 None:intergenic 40.0%
GAACACGGAGATAGAAAGAT+GGG - chr7_4:53054340-53054359 None:intergenic 40.0%
AGAACACGGAGATAGAAAGA+TGG - chr7_4:53054341-53054360 None:intergenic 40.0%
AGTCATTCCATTGTGGTGTA+TGG - chr7_4:53054580-53054599 None:intergenic 40.0%
!! TGCTCCATCAGATCTTGTTT+TGG + chr7_4:53054705-53054724 Msa1162370:intron 40.0%
!!! TCCATCAGATCTTGTTTTGG+TGG + chr7_4:53054708-53054727 Msa1162370:intron 40.0%
!!! CCATCAGATCTTGTTTTGGT+GGG + chr7_4:53054709-53054728 Msa1162370:intron 40.0%
TTTGTAAGATGGACGGAAGA+CGG - chr7_4:53054838-53054857 None:intergenic 40.0%
CATAATAGAACGAAGCGGAA+CGG - chr7_4:53054962-53054981 None:intergenic 40.0%
! CAAAGCCTAAGTCTTTTTGG+AGG + chr7_4:53054997-53055016 Msa1162370:intron 40.0%
TCATCCCTCCAAAAAGACTT+AGG - chr7_4:53055005-53055024 None:intergenic 40.0%
GTTGTTCATTATCTCAGCCA+TGG - chr7_4:53055452-53055471 None:intergenic 40.0%
AGTGCTAAGACTTCATCCAA+CGG + chr7_4:53055585-53055604 Msa1162370:CDS 40.0%
TCTCAGGTATATACTCCTCA+GGG - chr7_4:53055732-53055751 None:intergenic 40.0%
AGATTCTTAGTAGGTGGTGA+TGG + chr7_4:53055751-53055770 Msa1162370:CDS 40.0%
! TTCCATTTGGATTTGGTAGG+AGG + chr7_4:53055833-53055852 Msa1162370:CDS 40.0%
! TCCATTTGGATTTGGTAGGA+GGG + chr7_4:53055834-53055853 Msa1162370:CDS 40.0%
TGGTTCATCACTTGCTTTGA+CGG + chr7_4:53055864-53055883 Msa1162370:CDS 40.0%
!! AGGTGGTGATAAGGTTGATA+TGG + chr7_4:53055939-53055958 Msa1162370:CDS 40.0%
GTAACAGGGTAACAAACTAG+AGG - chr7_4:53056000-53056019 None:intergenic 40.0%
! GCATGGTGGGGGTTTAAATT+TGG - chr7_4:53052961-53052980 None:intergenic 45.0%
TGGTGAAGGTGGCCTATTAT+GGG - chr7_4:53052996-53053015 None:intergenic 45.0%
ATGGTGAAGGTGGCCTATTA+TGG - chr7_4:53052997-53053016 None:intergenic 45.0%
TTGGTATCACTGAGCCTAGA+TGG - chr7_4:53053016-53053035 None:intergenic 45.0%
TTTAGCTACCGACCCCAATT+TGG + chr7_4:53053161-53053180 Msa1162370:CDS 45.0%
! TAGGTCAACGGATTTGGGTT+TGG + chr7_4:53053373-53053392 Msa1162370:CDS 45.0%
CATCTTGTGTCGTATGAGCA+TGG + chr7_4:53053418-53053437 Msa1162370:CDS 45.0%
GTTCGGGAGTTTATGCATGT+AGG + chr7_4:53053494-53053513 Msa1162370:CDS 45.0%
! GGTGAAGTACTTGGACCTTT+GGG + chr7_4:53053533-53053552 Msa1162370:CDS 45.0%
! GTGAAGTACTTGGACCTTTG+GGG + chr7_4:53053534-53053553 Msa1162370:CDS 45.0%
GGATTGTCAAGGAGACATGA+TGG + chr7_4:53053664-53053683 Msa1162370:CDS 45.0%
ACGCTGAAGTGAGGTTAACA+AGG + chr7_4:53053717-53053736 Msa1162370:CDS 45.0%
TCATCTAACACCAATCGTGG+TGG - chr7_4:53053990-53054009 None:intergenic 45.0%
ATTGGTGGAGAGGTAACCTA+AGG + chr7_4:53054023-53054042 Msa1162370:intron 45.0%
GGGGGGGAATGAAAATTTGA+AGG - chr7_4:53054188-53054207 None:intergenic 45.0%
TTTCATTCCCCCCCAATTTG+GGG + chr7_4:53054194-53054213 Msa1162370:intron 45.0%
TTGCATACACCCCAAATTGG+GGG - chr7_4:53054206-53054225 None:intergenic 45.0%
CCATTGCATACACCCCAAAT+TGG - chr7_4:53054209-53054228 None:intergenic 45.0%
! CCAATTTGGGGTGTATGCAA+TGG + chr7_4:53054206-53054225 Msa1162370:intron 45.0%
CACGAGAATTTGGGAGAACA+CGG - chr7_4:53054355-53054374 None:intergenic 45.0%
CATTCCACCATACACCACAA+TGG + chr7_4:53054570-53054589 Msa1162370:intron 45.0%
CATTCCATTGTGGTGTATGG+TGG - chr7_4:53054577-53054596 None:intergenic 45.0%
CCCACCAAAACAAGATCTGA+TGG - chr7_4:53054712-53054731 None:intergenic 45.0%
TGGAATGGAGCAGAATGGAA+CGG - chr7_4:53054932-53054951 None:intergenic 45.0%
TGATTGTGGGTCCCTCATAA+TGG - chr7_4:53055701-53055720 None:intergenic 45.0%
TTATGAGGGACCCACAATCA+TGG + chr7_4:53055701-53055720 Msa1162370:CDS 45.0%
TATGAGGGACCCACAATCAT+GGG + chr7_4:53055702-53055721 Msa1162370:CDS 45.0%
CTCTCAGGTATATACTCCTC+AGG - chr7_4:53055733-53055752 None:intergenic 45.0%
CCACCTACTAAGAATCTCTC+AGG - chr7_4:53055748-53055767 None:intergenic 45.0%
CCTGAGAGATTCTTAGTAGG+TGG + chr7_4:53055745-53055764 Msa1162370:CDS 45.0%
!! GTAGGTGGTGATGGAATCAA+CGG + chr7_4:53055760-53055779 Msa1162370:CDS 45.0%
! CCATTTGGATTTGGTAGGAG+GGG + chr7_4:53055835-53055854 Msa1162370:CDS 45.0%
GTCAAAGCAAGTGATGAACC+AGG - chr7_4:53055865-53055884 None:intergenic 45.0%
! GAAGGGTCATCATTTTCTGC+TGG + chr7_4:53055964-53055983 Msa1162370:CDS 45.0%
TAGTGATCTTGGGCATGGTG+GGG - chr7_4:53052973-53052992 None:intergenic 50.0%
GTAGTGATCTTGGGCATGGT+GGG - chr7_4:53052974-53052993 None:intergenic 50.0%
ATGGGTAGTGATCTTGGGCA+TGG - chr7_4:53052978-53052997 None:intergenic 50.0%
ATAGGCCACCTTCACCATCT+AGG + chr7_4:53052999-53053018 Msa1162370:CDS 50.0%
TCACTGAGCCTAGATGGTGA+AGG - chr7_4:53053010-53053029 None:intergenic 50.0%
GAGAGGATCCAAATTGGGGT+CGG - chr7_4:53053172-53053191 None:intergenic 50.0%
CTGCCCCATATGGTCCTTAT+TGG + chr7_4:53053225-53053244 Msa1162370:CDS 50.0%
! GGGTGAAGTACTTGGACCTT+TGG + chr7_4:53053532-53053551 Msa1162370:CDS 50.0%
CAATCGTGGTGGTAGGAAGT+AGG - chr7_4:53053979-53053998 None:intergenic 50.0%
CTACTTCCTACCACCACGAT+TGG + chr7_4:53053977-53053996 Msa1162370:intron 50.0%
CTAACACCAATCGTGGTGGT+AGG - chr7_4:53053986-53054005 None:intergenic 50.0%
! TGGAATGTGATGGAGTGGGA+TGG + chr7_4:53054061-53054080 Msa1162370:intron 50.0%
TGGAGTGGGATGGAATGAAG+TGG + chr7_4:53054071-53054090 Msa1162370:intron 50.0%
TGCATACACCCCAAATTGGG+GGG - chr7_4:53054205-53054224 None:intergenic 50.0%
TGGAGCAGAATGGAACGGAA+TGG - chr7_4:53054927-53054946 None:intergenic 50.0%
! CGTGATGGAATGGAGCAGAA+TGG - chr7_4:53054937-53054956 None:intergenic 50.0%
! TGCAAGGACATTTTCCTCGC+TGG + chr7_4:53055394-53055413 Msa1162370:intron 50.0%
TGGAACAGACACATCCTCAG+TGG + chr7_4:53055414-53055433 Msa1162370:CDS 50.0%
CATCCTCAGTGGCAATGCAA+TGG + chr7_4:53055425-53055444 Msa1162370:CDS 50.0%
AGTGGCAATGCAATGGACCA+TGG + chr7_4:53055432-53055451 Msa1162370:CDS 50.0%
CAGGGTTGACCCATGATTGT+GGG - chr7_4:53055714-53055733 None:intergenic 50.0%
TCAGGGTTGACCCATGATTG+TGG - chr7_4:53055715-53055734 None:intergenic 50.0%
ACAATCATGGGTCAACCCTG+AGG + chr7_4:53055714-53055733 Msa1162370:CDS 50.0%
CCCCTCCTACCAAATCCAAA+TGG - chr7_4:53055838-53055857 None:intergenic 50.0%
AGTGATCTTGGGCATGGTGG+GGG - chr7_4:53052972-53052991 None:intergenic 55.0%
GGTAGTGATCTTGGGCATGG+TGG - chr7_4:53052975-53052994 None:intergenic 55.0%
CTGAGCCTAGATGGTGAAGG+TGG - chr7_4:53053007-53053026 None:intergenic 55.0%
GCATACACCCCAAATTGGGG+GGG - chr7_4:53054204-53054223 None:intergenic 55.0%
! CGGAACGGAACGTGATGGAA+TGG - chr7_4:53054947-53054966 None:intergenic 55.0%
AGGATGTGTCTGTTCCAGCG+AGG - chr7_4:53055411-53055430 None:intergenic 55.0%
GGTCCATTGCATTGCCACTG+AGG - chr7_4:53055431-53055450 None:intergenic 55.0%
!! CTAAGAGCAAACGGTGCCGT+TGG - chr7_4:53055604-53055623 None:intergenic 55.0%
TTTGGTAGGAGGGGTTGTCC+TGG + chr7_4:53055844-53055863 Msa1162370:CDS 55.0%
CGAAGCGGAACGGAACGTGA+TGG - chr7_4:53054952-53054971 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 53052852 53056038 53052852 ID=Msa1162370;Name=Msa1162370
chr7_4 mRNA 53052852 53056038 53052852 ID=Msa1162370-mRNA-1;Parent=Msa1162370;Name=Msa1162370-mRNA-1;_AED=0.25;_eAED=0.26;_QI=0|0|0|1|1|1|2|0|516
chr7_4 exon 53052852 53053763 53052852 ID=Msa1162370-mRNA-1:exon:15285;Parent=Msa1162370-mRNA-1
chr7_4 exon 53055400 53056038 53055400 ID=Msa1162370-mRNA-1:exon:15286;Parent=Msa1162370-mRNA-1
chr7_4 CDS 53052852 53053763 53052852 ID=Msa1162370-mRNA-1:cds;Parent=Msa1162370-mRNA-1
chr7_4 CDS 53055400 53056038 53055400 ID=Msa1162370-mRNA-1:cds;Parent=Msa1162370-mRNA-1
Gene Sequence

>Msa1162370

ATGGCATTTGATGGTGCTACTATTTTCTTCTACATCTTCTCCTTTCTTCTAGCTTTGCTAATTTTCACATTACTTGTCAACAATAAACGAACCACAAATGGTAGCTCCAAATTTAAACCCCCACCATGCCCAAGATCACTACCCATAATAGGCCACCTTCACCATCTAGGCTCAGTGATACCAAAATCATTCCAAACACTTTCTCACCAATATGGTCCTTTAATTCAGCTCAATCTTGGTGCCTCAACTTCTATAGTTGTCTCCAATGCACAAGTTGCCAAACAAGTCATGAAAACACATGACTTTAATTTTAGCTACCGACCCCAATTTGGATCCTCTCATGATTACTTATACGAAGGGTCTTATTTCATCACTGCCCCATATGGTCCTTATTGGAGATTCATGAAAAAAATATGCGTTACTAAATTACTATCTAGCTCTCAACTTGGTCACTTCATACATATTAGAGAGCAAGAATTAGAGAAACTCTTGAAGTCTCTTGTGGTATGCTCAAGTGAAAATAGGTCAACGGATTTGGGTTTGGACTTGACTACTTTGACCAATAACATCTTGTGTCGTATGAGCATGGGAACCACATGCTTTCAAAAATACAATATTGATCCTAAGGTTATTCAATGTTTGGTTCGGGAGTTTATGCATGTAGGAGCTAAATTGAGTATGGGTGAAGTACTTGGACCTTTGGGGAAGTTTGACTTGTTTGGTTATGGGAAAAAGCTTACGAAAATAGTGGGGGAATTTGACAAGATTTTGGAAGGTTTCTTGAAGGAACATGAAGAGAGAATAAACACTGAGGATTGTCAAGGAGACATGATGGATATCCTATTAGAAGTGTATAGAAATGAAAACGCTGAAGTGAGGTTAACAAGGAATGATATCAAGGCGTTCTTCCTTGACATTTTCCTCGCTGGAACAGACACATCCTCAGTGGCAATGCAATGGACCATGGCTGAGATAATGAACAACCCTAAAATATTGAAGAAATTAAGGGCTGAGATTAATGATGTTGTAGGCACTAATAGATTGGTTAAAGAATCAGACATTCCAAAAATGCCTTACTTACAAGCATGTGTGAAGGAAGTGCTAAGACTTCATCCAACGGCACCGTTTGCTCTTAGACAATCATCAAAAGATTGCAAAATCAACGGCTATGATATAAAAGCTCATACTAGGACACTTGTCAATGTATATGCCATTATGAGGGACCCACAATCATGGGTCAACCCTGAGGAGTATATACCTGAGAGATTCTTAGTAGGTGGTGATGGAATCAACGGTGAAGATCATGAACATGTGAATAAAATGGATGGTGATGATTTTAGGTATATTCCATTTGGATTTGGTAGGAGGGGTTGTCCTGGTTCATCACTTGCTTTGACGGTTATACATGTGACAATTGCTGCATTGATTCAATGTTTTGAATGGAAAATTAAAGGTGGTGATAAGGTTGATATGGAAGAAGGGTCATCATTTTCTGCTGGATTAGCAAAACCTCTAGTTTGTTACCCTGTTACTTGTTTTAATCCTTTTTAA
Protein sequence

>Msa1162370

MAFDGATIFFYIFSFLLALLIFTLLVNNKRTTNGSSKFKPPPCPRSLPIIGHLHHLGSVIPKSFQTLSHQYGPLIQLNLGASTSIVVSNAQVAKQVMKTHDFNFSYRPQFGSSHDYLYEGSYFITAPYGPYWRFMKKICVTKLLSSSQLGHFIHIREQELEKLLKSLVVCSSENRSTDLGLDLTTLTNNILCRMSMGTTCFQKYNIDPKVIQCLVREFMHVGAKLSMGEVLGPLGKFDLFGYGKKLTKIVGEFDKILEGFLKEHEERINTEDCQGDMMDILLEVYRNENAEVRLTRNDIKAFFLDIFLAGTDTSSVAMQWTMAEIMNNPKILKKLRAEINDVVGTNRLVKESDIPKMPYLQACVKEVLRLHPTAPFALRQSSKDCKINGYDIKAHTRTLVNVYAIMRDPQSWVNPEEYIPERFLVGGDGINGEDHEHVNKMDGDDFRYIPFGFGRRGCPGSSLALTVIHVTIAALIQCFEWKIKGGDKVDMEEGSSFSAGLAKPLVCYPVTCFNPF*