AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1206330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206330 MtrunA17_Chr4g0055471 90.155 772 51 4 1 754 51 815 0.0 1407
Msa1206330 MtrunA17_Chr8g0380281 60.232 777 267 7 2 754 24 782 0.0 928
Msa1206330 MtrunA17_Chr7g0268981 50.387 776 306 6 2 754 54 773 0.0 793
Msa1206330 MtrunA17_Chr8g0344561 58.882 608 184 7 165 754 13 572 0.0 723
Msa1206330 MtrunA17_Chr8g0365001 45.362 787 367 9 4 754 81 840 0.0 675
Msa1206330 MtrunA17_Chr2g0279131 42.784 776 403 7 4 754 90 849 0.0 637
Msa1206330 MtrunA17_Chr3g0128831 43.284 804 376 14 6 752 12 792 0.0 629
Msa1206330 MtrunA17_Chr6g0451081 41.977 779 398 11 11 754 17 776 0.0 629
Msa1206330 MtrunA17_Chr5g0429991 43.061 771 382 8 17 754 103 849 0.0 619
Msa1206330 MtrunA17_Chr4g0052401 44.751 762 375 9 15 754 50 787 0.0 617
Msa1206330 MtrunA17_Chr6g0461871 42.513 788 404 9 2 754 12 785 0.0 613
Msa1206330 MtrunA17_Chr2g0297291 43.758 761 386 10 15 754 50 789 0.0 609
Msa1206330 MtrunA17_Chr8g0344591 59.865 446 142 3 165 593 13 438 0.0 567
Msa1206330 MtrunA17_Chr5g0430731 39.450 763 405 10 15 754 26 754 0.0 559
Msa1206330 MtrunA17_Chr8g0387661 38.701 770 434 12 17 754 29 792 2.30e-174 520
Msa1206330 MtrunA17_Chr8g0365031 49.254 469 206 4 180 618 38 504 2.62e-162 480
Msa1206330 MtrunA17_Chr8g0365031 33.333 126 77 3 634 754 428 551 1.85e-15 80.1
Msa1206330 MtrunA17_Chr8g0393241 33.456 816 455 12 3 754 8 799 5.07e-155 470
Msa1206330 MtrunA17_Chr8g0375411 38.662 613 341 7 2 592 16 615 1.46e-144 440
Msa1206330 MtrunA17_Chr5g0413721 47.059 425 194 6 4 397 10 434 4.54e-122 386
Msa1206330 MtrunA17_Chr5g0413721 34.511 368 226 2 390 754 516 871 3.13e-61 221
Msa1206330 MtrunA17_Chr2g0297311 48.843 389 178 3 23 391 58 445 3.80e-121 371
Msa1206330 MtrunA17_Chr5g0430571 34.576 590 300 11 180 754 17 535 1.58e-108 341
Msa1206330 MtrunA17_Chr8g0344581 73.026 152 37 1 14 165 3 150 5.07e-73 234
Msa1206330 MtrunA17_Chr8g0344551 73.026 152 37 1 14 165 3 150 5.81e-73 234
Msa1206330 MtrunA17_Chr2g0297321 37.197 371 200 9 391 754 3 347 3.36e-68 228
Msa1206330 MtrunA17_Chr8g0365041 63.218 174 62 2 2 173 49 222 1.95e-65 217
Msa1206330 MtrunA17_Chr5g0413751 39.429 175 106 0 391 565 133 307 2.73e-42 156
Msa1206330 MtrunA17_Chr5g0413751 43.478 92 48 1 74 161 47 138 1.61e-12 69.3
Msa1206330 MtrunA17_Chr5g0430551 47.403 154 77 2 15 165 11 163 3.68e-41 149
Msa1206330 MtrunA17_Chr8g0344601 67.532 77 24 1 678 754 1 76 1.01e-26 103
Msa1206330 MtrunA17_Chr1g0159401 46.218 119 54 3 163 278 12 123 1.92e-22 94.7
Msa1206330 MtrunA17_Chr6g0467721 39.850 133 75 3 176 306 19 148 2.08e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206330 AT4G13420.1 57.235 774 276 8 2 754 46 785 0.0 891
Msa1206330 AT1G60160.1 45.408 773 376 8 5 754 78 827 0.0 697
Msa1206330 AT5G14880.1 43.878 784 391 11 4 752 10 779 0.0 634
Msa1206330 AT2G40540.1 42.529 783 410 10 6 752 14 792 0.0 628
Msa1206330 AT2G40540.5 42.529 783 410 10 6 752 14 792 0.0 628
Msa1206330 AT2G40540.4 42.529 783 410 10 6 752 14 792 0.0 628
Msa1206330 AT2G40540.2 42.529 783 410 10 6 752 14 792 0.0 628
Msa1206330 AT2G40540.3 42.529 783 410 10 6 752 14 792 0.0 628
Msa1206330 AT4G33530.1 42.308 780 402 8 4 754 95 855 0.0 622
Msa1206330 AT1G31120.1 43.857 757 375 9 23 754 65 796 0.0 612
Msa1206330 AT2G35060.4 43.444 755 376 10 23 754 66 792 0.0 612
Msa1206330 AT2G35060.1 43.444 755 376 10 23 754 66 792 0.0 612
Msa1206330 AT2G35060.3 43.444 755 376 10 23 754 66 792 0.0 612
Msa1206330 AT2G35060.2 43.386 756 376 11 23 754 66 793 0.0 608
Msa1206330 AT5G09400.1 42.283 771 393 8 17 754 107 858 0.0 602
Msa1206330 AT1G70300.1 40.868 783 414 9 8 754 13 782 0.0 595
Msa1206330 AT4G19960.2 43.140 758 397 6 19 754 62 807 0.0 585
Msa1206330 AT4G19960.1 42.248 774 397 7 19 754 62 823 0.0 575
Msa1206330 AT4G19960.3 41.709 784 397 7 19 754 62 833 0.0 571
Msa1206330 AT4G23640.1 38.781 771 430 9 15 752 12 773 0.0 556
Msa1206330 AT3G02050.1 40.537 782 424 9 7 754 15 789 0.0 550
Msa1206330 AT2G30070.1 44.046 613 319 4 1 590 12 623 0.0 546
Msa1206330 AT4G33530.2 40.758 633 328 7 150 754 14 627 3.14e-162 483
Msa1206330 AT4G19960.4 40.201 597 327 4 177 754 1 586 3.70e-146 441
Msa1206330 AT2G30070.2 43.141 503 265 3 108 590 2 503 6.14e-144 435

Find 144 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATATGGTTTACATTTAT+TGG 0.125815 8_1:-63296323 Msa1206330:CDS
TGACAATAATTATGGGAATT+TGG 0.164270 8_1:-63294666 Msa1206330:CDS
AAGTAATCAACAATATATTT+TGG 0.188421 8_1:+63296242 None:intergenic
TTGTTCAAAACGGAAGAATT+TGG 0.197103 8_1:+63293905 None:intergenic
TTATATGGAAGAGGAGTTTA+TGG 0.203838 8_1:-63294801 Msa1206330:CDS
TGAGGCCATGTTTGCTGATT+TGG 0.205167 8_1:-63296073 Msa1206330:CDS
ATTCTCACTCCATCTATTTC+AGG 0.216313 8_1:-63297993 Msa1206330:intron
GGGCATCACCGTAGCAATTT+TGG 0.256771 8_1:-63296411 Msa1206330:CDS
GCAATATTGATAGCATATAT+TGG 0.264512 8_1:-63295747 Msa1206330:CDS
GCTAGTCAAGCAATGATTTC+AGG 0.264683 8_1:-63295155 Msa1206330:CDS
CACTTATAATGCTTGTTATA+TGG 0.270739 8_1:-63294816 Msa1206330:CDS
TACGTTCTTGACAATAATTA+TGG 0.282502 8_1:-63294674 Msa1206330:CDS
CATGTCTTCAGGTTGTTGAT+TGG 0.293896 8_1:+63298163 None:intergenic
ATAAACTTTATTTCCTCTTC+AGG 0.294343 8_1:+63293989 None:intergenic
TCTTCAGGTCCTTGAATGAT+AGG 0.318939 8_1:+63294004 None:intergenic
CATTTGATCACTCTCATTAG+TGG 0.324843 8_1:+63294171 None:intergenic
CAAATCGTTGCATACAAAAT+AGG 0.330136 8_1:+63296384 None:intergenic
AATGTAGGGATTGCTGTTAT+TGG 0.335979 8_1:-63294868 Msa1206330:intron
GTAAACCATATTAAAATAAC+TGG 0.336183 8_1:+63296332 None:intergenic
TTTACATTTATTGGTGGTAT+TGG 0.340172 8_1:-63296314 Msa1206330:CDS
TTAGAGAGTTCCATGTCTTC+AGG 0.342622 8_1:+63298152 None:intergenic
ACTAAGGGCTTGTGATATAA+TGG 0.344601 8_1:+63295124 None:intergenic
TGTTCAAAACGGAAGAATTT+GGG 0.345500 8_1:+63293906 None:intergenic
GCTATAAAGTGAGGAAATAT+TGG 0.350177 8_1:+63294499 None:intergenic
GAGGCCATGTTTGCTGATTT+GGG 0.352374 8_1:-63296072 Msa1206330:CDS
TCGTGTAGACTCTCTCAATT+TGG 0.352874 8_1:-63302451 Msa1206330:five_prime_UTR
ATGTCTTCAGGTTGTTGATT+GGG 0.355101 8_1:+63298164 None:intergenic
CATTATATTCGTTGATATGT+AGG 0.357181 8_1:-63298208 Msa1206330:CDS
TACCGAGTATTTGAAGGAAT+TGG 0.359940 8_1:-63294593 Msa1206330:CDS
TCCGGTTAATAGAGTTGCTT+TGG 0.361260 8_1:-63294425 Msa1206330:CDS
GGAATTGTATATGGTGATAT+TGG 0.365329 8_1:-63302224 Msa1206330:CDS
ATCAACTACATGTTCTTGAT+TGG 0.366077 8_1:-63295029 Msa1206330:CDS
CAAAGCATAGGAATTGTATA+TGG 0.366388 8_1:-63302233 Msa1206330:CDS
GATCAAATGGAAGATATATT+AGG 0.367516 8_1:-63294157 Msa1206330:CDS
CGTACCATTGCCATTGTCAT+TGG 0.374037 8_1:+63302061 None:intergenic
ACATGAGACGCACCTTTACT+TGG 0.376739 8_1:+63294088 None:intergenic
TTCTATGAACCTATCATTCA+AGG 0.381237 8_1:-63294013 Msa1206330:CDS
CGTCTCTATCAAGACAATTC+CGG 0.381259 8_1:-63294443 Msa1206330:CDS
TTAGGTAAAGAAGGGAAATC+AGG 0.383456 8_1:-63294139 Msa1206330:CDS
GTTGATTACTTCAAACGAAA+TGG 0.384165 8_1:-63296230 Msa1206330:CDS
CGAAATATTCTATACTCTCT+TGG 0.385653 8_1:+63294373 None:intergenic
AGGTTGTTTCCCTAGAGTTA+AGG 0.386363 8_1:-63295099 Msa1206330:CDS
GTACACAGAGTGCCTGGAAT+TGG 0.386790 8_1:-63294556 Msa1206330:CDS
TCACTCTCATTAGTGGAAAT+AGG 0.392266 8_1:+63294178 None:intergenic
ACTTGCAGGCAATGATCTAA+TGG 0.402385 8_1:+63294054 None:intergenic
CGCAAGAGACTTCTTAAAGT+TGG 0.407997 8_1:-63293809 Msa1206330:CDS
ATATATGCTATCAATATTGC+AGG 0.413376 8_1:+63295750 None:intergenic
CAATATTGATAGCATATATT+GGG 0.415101 8_1:-63295746 Msa1206330:CDS
TAGGCATATAAAGATGAGTT+TGG 0.416280 8_1:-63298189 Msa1206330:CDS
TCCAAAGCAACTCTATTAAC+CGG 0.418694 8_1:+63294424 None:intergenic
TATAGATAAAGCAACAGAAA+AGG 0.422805 8_1:-63293969 Msa1206330:CDS
TTGGAGCGTGACATTGAGTT+TGG 0.427209 8_1:-63302261 Msa1206330:CDS
ACGTTCTTGACAATAATTAT+GGG 0.428932 8_1:-63294673 Msa1206330:CDS
CACTAATGAGAGTGATCAAA+TGG 0.433632 8_1:-63294170 Msa1206330:CDS
TATAACCAACCTGAAATAGA+TGG 0.436195 8_1:+63297984 None:intergenic
GAAGATATATTAGGTAAAGA+AGG 0.436897 8_1:-63294148 Msa1206330:CDS
ATGGGAACTGCCATGGTCAT+AGG 0.438096 8_1:-63298023 Msa1206330:CDS
AAGAACGTAGCTAGTACAAT+TGG 0.440233 8_1:+63294688 None:intergenic
ATGCAAGTACTTTCACTAAA+GGG 0.442408 8_1:-63302181 Msa1206330:CDS
AATGAAAACGTATTTGATCA+TGG 0.444610 8_1:+63302094 None:intergenic
AAGAACATGTAGTTGATCTC+TGG 0.449490 8_1:+63295035 None:intergenic
CGCCAATTCCTTCAAATACT+CGG 0.451419 8_1:+63294591 None:intergenic
AAGGGAGTGGTATATATGAT+AGG 0.453426 8_1:-63293950 Msa1206330:CDS
GAACACAACAACTGAATGAA+TGG 0.460130 8_1:+63294465 None:intergenic
GACTCTCTCAATTTGGAAGC+TGG 0.465241 8_1:-63302444 Msa1206330:five_prime_UTR
AGTTTCTACCGAGTATTTGA+AGG 0.465367 8_1:-63294599 Msa1206330:CDS
TAGGGAAACAACCTAGACTA+AGG 0.467128 8_1:+63295108 None:intergenic
TATGCAAGTACTTTCACTAA+AGG 0.469628 8_1:-63302182 Msa1206330:CDS
CTTGCGCAAGAACTTTAGAC+AGG 0.474696 8_1:-63293855 Msa1206330:CDS
GTACTTGCATACACATAAAG+TGG 0.475123 8_1:+63302194 None:intergenic
ATAGAGTTGCTTTGGAAGAG+AGG 0.476150 8_1:-63294417 Msa1206330:CDS
GTATGAACAACCTTAACTCT+AGG 0.477403 8_1:+63295089 None:intergenic
TGTCTTTCAGATGCTGTTGT+GGG 0.478598 8_1:-63296431 Msa1206330:intron
CAAATAACCAAGTTCACAAA+AGG 0.480606 8_1:-63294721 Msa1206330:CDS
TTTATGCTTGAGGTTAATGA+AGG 0.481782 8_1:-63294250 Msa1206330:CDS
GAATACAAAAGTCCAATTCC+AGG 0.482274 8_1:+63294544 None:intergenic
CGCGGTTACAATGATACGCT+TGG 0.490134 8_1:-63294337 Msa1206330:CDS
ATAGATAAAGCAACAGAAAA+GGG 0.492768 8_1:-63293968 Msa1206330:CDS
AAAGAAGCTGAAAGATAGAA+AGG 0.493465 8_1:-63302493 Msa1206330:five_prime_UTR
GAGTGGGATCAGTACATCAC+TGG 0.493870 8_1:-63296587 Msa1206330:CDS
GAAAATATCAGTCATGCCTA+TGG 0.496765 8_1:-63294972 Msa1206330:intron
ACAAATGTACACAGAGTGCC+TGG 0.500015 8_1:-63294562 Msa1206330:CDS
ATGTCTTTCAGATGCTGTTG+TGG 0.500747 8_1:-63296432 Msa1206330:intron
TTGTATTCCGAGCTTGTACA+AGG 0.508381 8_1:-63294529 Msa1206330:CDS
ATATGGTTTACATTTATTGG+TGG 0.510397 8_1:-63296320 Msa1206330:CDS
TAATGCTTGTTATATGGAAG+AGG 0.511261 8_1:-63294810 Msa1206330:CDS
GACAACAATCTTGTTCAAAA+CGG 0.512405 8_1:+63293895 None:intergenic
ACGATTTGGTACTGATAAAG+TGG 0.520624 8_1:-63296369 Msa1206330:CDS
TTACTTCAAACGAAATGGTA+AGG 0.525749 8_1:-63296225 Msa1206330:CDS
ATATCACAAGCCCTTAGTCT+AGG 0.528128 8_1:-63295119 Msa1206330:CDS
CAATCAACAACCTGAAGACA+TGG 0.532260 8_1:-63298162 Msa1206330:CDS
ATGAAAACGTATTTGATCAT+GGG 0.535890 8_1:+63302095 None:intergenic
GCGGTTACAATGATACGCTT+GGG 0.536786 8_1:-63294336 Msa1206330:CDS
TTCAAACGAAATGGTAAGGA+AGG 0.540812 8_1:-63296221 Msa1206330:CDS
AAGATATATTAGGTAAAGAA+GGG 0.542373 8_1:-63294147 Msa1206330:CDS
CATGAGACGCACCTTTACTT+GGG 0.543470 8_1:+63294089 None:intergenic
TGAAAGATAGAAAGGTGTCA+TGG 0.543992 8_1:-63302485 Msa1206330:five_prime_UTR
AATAGAATAATCCCAAGTAA+AGG 0.545122 8_1:-63294100 Msa1206330:CDS
AACGAAATGGTAAGGAAGGA+TGG 0.546490 8_1:-63296217 Msa1206330:CDS
AGCTATAATGGGAACTGCCA+TGG 0.548694 8_1:-63298030 Msa1206330:CDS
AGGAATTCCTTGTACAAGCT+CGG 0.552364 8_1:+63294522 None:intergenic
AATCCCGTCACCTATGACCA+TGG 0.555736 8_1:+63298013 None:intergenic
GCATGAAGACCTTGGAATTG+TGG 0.557135 8_1:+63302400 None:intergenic
CTGCCATGGTCATAGGTGAC+GGG 0.560649 8_1:-63298016 Msa1206330:CDS
TAGGTAAAGAAGGGAAATCA+GGG 0.561984 8_1:-63294138 Msa1206330:CDS
ACATTCTATGACAGTATACC+AGG 0.564351 8_1:-63295681 Msa1206330:intron
GTGACCCAAATCAGCAAACA+TGG 0.571158 8_1:+63296068 None:intergenic
TATGAACAACCTTAACTCTA+GGG 0.573338 8_1:+63295090 None:intergenic
TAATTGTGACTCAAATTCCA+CGG 0.578225 8_1:+63294309 None:intergenic
TATCATTCAAGGACCTGAAG+AGG 0.578740 8_1:-63294002 Msa1206330:CDS
AGTTTGGCATTTCAAAGCAT+AGG 0.578744 8_1:-63302245 Msa1206330:CDS
GAAAGATAGAAAGGTGTCAT+GGG 0.579627 8_1:-63302484 Msa1206330:five_prime_UTR
ATAAAGTGAGGAAATATTGG+AGG 0.580170 8_1:+63294502 None:intergenic
ATGGAAGAGGAGTTTATGGA+TGG 0.581071 8_1:-63294797 Msa1206330:CDS
GAATATTTCGATGTGTTGCA+AGG 0.582921 8_1:-63294360 Msa1206330:CDS
AATTGTGACTCAAATTCCAC+GGG 0.583427 8_1:+63294310 None:intergenic
ACAACAACTGAATGAATGGA+TGG 0.583902 8_1:+63294469 None:intergenic
ACAATTAATACAAAATCTCA+AGG 0.584536 8_1:-63294293 Msa1206330:CDS
CTTTAAGAAGTCTCTTGCGT+GGG 0.585069 8_1:+63293813 None:intergenic
AACAGATCGAGTGAGCATAG+AGG 0.593649 8_1:-63302547 None:intergenic
CATACTTCAACTAAGCATCA+AGG 0.594848 8_1:-63295071 Msa1206330:CDS
ACATATTATCATAGGATCTG+AGG 0.596779 8_1:-63296091 Msa1206330:intron
ATAACCAAGTTCACAAAAGG+AGG 0.599159 8_1:-63294718 Msa1206330:CDS
TATGTGTCATGCAGGTGGGT+TGG 0.599730 8_1:-63302280 Msa1206330:intron
GTCTTATGGGCCAATGACAA+TGG 0.601386 8_1:-63302071 Msa1206330:CDS
TTTCGATGTGTTGCAAGGCG+CGG 0.607397 8_1:-63294355 Msa1206330:CDS
GAATGCAAACCACAATTCCA+AGG 0.608592 8_1:-63302409 Msa1206330:intron
TAGGACAACCAAAATTGCTA+CGG 0.609406 8_1:+63296403 None:intergenic
ACTGCCATGGTCATAGGTGA+CGG 0.609643 8_1:-63298017 Msa1206330:CDS
ATATATGATAGGTGAAGCAG+AGG 0.610482 8_1:-63293939 Msa1206330:CDS
AGGGAAACAACCTAGACTAA+GGG 0.612954 8_1:+63295109 None:intergenic
ACTTTAAGAAGTCTCTTGCG+TGG 0.613924 8_1:+63293812 None:intergenic
TAAAGCAACAGAAAAGGGAG+TGG 0.618850 8_1:-63293963 Msa1206330:CDS
TGGGCCAATGACAATGGCAA+TGG 0.620515 8_1:-63302065 Msa1206330:intron
AAGGAAGGATGGCTATCACT+AGG 0.622756 8_1:-63296206 Msa1206330:CDS
TTGCGCAAGAACTTTAGACA+GGG 0.636029 8_1:-63293854 Msa1206330:CDS
CAGTGCTATCTGCAGTGAGT+GGG 0.640451 8_1:-63296603 Msa1206330:CDS
GCAGTGCTATCTGCAGTGAG+TGG 0.640823 8_1:-63296604 Msa1206330:intron
CGATTTGGTACTGATAAAGT+GGG 0.645606 8_1:-63296368 Msa1206330:CDS
AGTGGGATCAGTACATCACT+GGG 0.667534 8_1:-63296586 Msa1206330:CDS
GGTACACTAGCTATAAAGTG+AGG 0.674589 8_1:+63294490 None:intergenic
GGATGAGACAGAGACAACAA+AGG 0.675047 8_1:-63302526 Msa1206330:five_prime_UTR
TGATACGCTTGGGAATCCCG+TGG 0.697305 8_1:-63294326 Msa1206330:CDS
GAAGGATGGCTATCACTAGG+TGG 0.709671 8_1:-63296203 Msa1206330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr8_1:63295759-63295778 None:intergenic 0.0%
!! AATAATAAAAAAAAAATATT+TGG + chr8_1:63297695-63297714 None:intergenic 0.0%
!! TATAAAAATTTCAACATAAA+CGG + chr8_1:63294344-63294363 None:intergenic 10.0%
!!! TAGTATTTTATATTTGATAT+AGG + chr8_1:63294501-63294520 None:intergenic 10.0%
!!! TTAGTTTATTGTAATTATTT+TGG - chr8_1:63294849-63294868 Msa1206330:CDS 10.0%
!!! TAAGTAAATATTTTTCATAA+AGG + chr8_1:63295025-63295044 None:intergenic 10.0%
!!! CTTTAAAAATAAACTATTTT+TGG + chr8_1:63295073-63295092 None:intergenic 10.0%
!! AAAAAAAAAAAAAATACCTA+AGG + chr8_1:63295151-63295170 None:intergenic 10.0%
!!! AGGTATTTTTTTTTTTTTTA+CGG - chr8_1:63295152-63295171 Msa1206330:CDS 10.0%
!! ATTGTGATAAAATAAAATAA+CGG + chr8_1:63295423-63295442 None:intergenic 10.0%
!!! ATTTTATCACAATATATTAT+TGG - chr8_1:63295430-63295449 Msa1206330:intron 10.0%
!!! TTTTATCACAATATATTATT+GGG - chr8_1:63295431-63295450 Msa1206330:intron 10.0%
!!! CTTTTATATTTTTTTTTTGA+AGG - chr8_1:63295552-63295571 Msa1206330:intron 10.0%
!! AAAATTAATAAATAAGGATA+AGG - chr8_1:63296263-63296282 Msa1206330:CDS 10.0%
!!! ACTTATTCTTTAATAATTTT+AGG + chr8_1:63296935-63296954 None:intergenic 10.0%
!! TAAAACTTGATAAAAATTAT+AGG + chr8_1:63297366-63297385 None:intergenic 10.0%
!!! TAATTTTTATCAAGTTTTAT+AGG - chr8_1:63297367-63297386 Msa1206330:intron 10.0%
!!! AATTTTTATCAAGTTTTATA+GGG - chr8_1:63297368-63297387 Msa1206330:intron 10.0%
!! TTATATATAAAAATTTGTAG+AGG + chr8_1:63297885-63297904 None:intergenic 10.0%
!!! CAATATTTTGAAATAATTAA+AGG - chr8_1:63299135-63299154 Msa1206330:intron 10.0%
!! ATCAAATCATATATATATAA+AGG + chr8_1:63299558-63299577 None:intergenic 10.0%
!! TAATAATATTGTCTAATTAA+TGG + chr8_1:63300963-63300982 None:intergenic 10.0%
!!! ATATAATTAATTTGTCAAGA+GGG + chr8_1:63294033-63294052 None:intergenic 15.0%
!! TTTATCACAATATATTATTG+GGG - chr8_1:63295432-63295451 Msa1206330:intron 15.0%
!! TATATATATATGTATTTGGT+TGG + chr8_1:63295750-63295769 None:intergenic 15.0%
!!! CCTTATTTATTAATTTTACT+AGG + chr8_1:63296260-63296279 None:intergenic 15.0%
!! CCTAGTAAAATTAATAAATA+AGG - chr8_1:63296257-63296276 Msa1206330:CDS 15.0%
!! TAAAAAGGGAAAAATAATAA+AGG + chr8_1:63296330-63296349 None:intergenic 15.0%
!! TATATATATATATATTGTGG+TGG + chr8_1:63296858-63296877 None:intergenic 15.0%
!!! ATTTACTTTTTAATGTTTGT+AGG + chr8_1:63296902-63296921 None:intergenic 15.0%
!!! ATTCTTTAATAATTTTAGGT+AGG + chr8_1:63296931-63296950 None:intergenic 15.0%
!! ACAATAAATAAGTACATATA+AGG - chr8_1:63297158-63297177 Msa1206330:intron 15.0%
!!! AACGAAATATTTTAATATCA+AGG - chr8_1:63297230-63297249 Msa1206330:intron 15.0%
!!! ATTTTTATCAAGTTTTATAG+GGG - chr8_1:63297369-63297388 Msa1206330:intron 15.0%
!!! AATCTTGTATAATTTTTTCT+TGG + chr8_1:63297761-63297780 None:intergenic 15.0%
!!! TTTTTGTATGTAAATAGAAA+AGG + chr8_1:63298419-63298438 None:intergenic 15.0%
!!! AATTTTAAATGATTTTCAAG+AGG - chr8_1:63298458-63298477 Msa1206330:intron 15.0%
!!! TGATAATAGTTAACTTTTTT+TGG + chr8_1:63298522-63298541 None:intergenic 15.0%
!! ATAAATATAATAGTTGTGAT+AGG - chr8_1:63299241-63299260 Msa1206330:intron 15.0%
!!! AATATGTTTTTTATATGCAA+GGG - chr8_1:63299408-63299427 Msa1206330:intron 15.0%
!!! TTGATTTTCTAATATGATAT+TGG - chr8_1:63299573-63299592 Msa1206330:intron 15.0%
!! TTAATATGGTTTACATTTAT+TGG - chr8_1:63300007-63300026 Msa1206330:intron 15.0%
!!! AATTTTTTCAAATATGACAT+TGG - chr8_1:63300046-63300065 Msa1206330:intron 15.0%
!!! AAGTAATCAACAATATATTT+TGG + chr8_1:63300091-63300110 None:intergenic 15.0%
!! AAAATAAAAAATCAAATGTC+AGG + chr8_1:63300796-63300815 None:intergenic 15.0%
!! AAATTTGATATAATCAAGAT+TGG + chr8_1:63300853-63300872 None:intergenic 15.0%
!!! GATTATATCAAATTTTAATC+TGG - chr8_1:63300858-63300877 Msa1206330:intron 15.0%
!!! TATTCACATTTGTTAATTAA+TGG + chr8_1:63301097-63301116 None:intergenic 15.0%
!!! ATATAGATCCTCTAAAAAAA+GGG + chr8_1:63293972-63293991 None:intergenic 20.0%
!! ATCTATATCAATGAATTGTT+TGG - chr8_1:63293984-63294003 Msa1206330:CDS 20.0%
!!! CATATAATTAATTTGTCAAG+AGG + chr8_1:63294034-63294053 None:intergenic 20.0%
!!! CTTTTTGTAATCAAATGAAA+CGG + chr8_1:63294757-63294776 None:intergenic 20.0%
!! TACAATAAACTAATCAAGAT+TGG + chr8_1:63294842-63294861 None:intergenic 20.0%
!! AAAAAAAAAATACCTAAGGT+AGG + chr8_1:63295147-63295166 None:intergenic 20.0%
!!! AATACTATTTTATTGTTGCA+CGG - chr8_1:63295512-63295531 Msa1206330:intron 20.0%
!!! TTTTTTTTTTGAGAGAAACA+CGG - chr8_1:63295895-63295914 Msa1206330:intron 20.0%
!! AATAAATAAGGATAAGGATT+TGG - chr8_1:63296269-63296288 Msa1206330:CDS 20.0%
!! ACGATTCTCAAATTTAAAAA+GGG + chr8_1:63296344-63296363 None:intergenic 20.0%
!! AACGATTCTCAAATTTAAAA+AGG + chr8_1:63296345-63296364 None:intergenic 20.0%
!! ACAAAGTTATAACTAAAAAG+TGG + chr8_1:63296596-63296615 None:intergenic 20.0%
!!! ACAACAACTAATTTTTATGA+AGG + chr8_1:63296628-63296647 None:intergenic 20.0%
!!! ACAATAACTCTTTTGATATA+TGG - chr8_1:63297126-63297145 Msa1206330:intron 20.0%
!!! ATCGAATTAACTATTTTGAA+TGG - chr8_1:63298081-63298100 Msa1206330:CDS 20.0%
!!! AAGCTTTTGTTTCAATTTAT+GGG + chr8_1:63298242-63298261 None:intergenic 20.0%
!!! TTGAAAATAGTCATTTTTCA+CGG - chr8_1:63298260-63298279 Msa1206330:intron 20.0%
!! CAAAAATTCATTTATAGACA+CGG - chr8_1:63298433-63298452 Msa1206330:intron 20.0%
!! ATACAAGAAGGATAAAAATA+CGG - chr8_1:63298560-63298579 Msa1206330:intron 20.0%
!!! TATTTAAAGTGAAGTTTGTT+AGG + chr8_1:63298645-63298664 None:intergenic 20.0%
!! TTGAATATGATTGTAGTAAA+AGG - chr8_1:63299166-63299185 Msa1206330:intron 20.0%
!! ATATTTATTAAAATCGGAGA+TGG + chr8_1:63299229-63299248 None:intergenic 20.0%
!!! GACTTACTCTTTTTTTAAAT+GGG + chr8_1:63299337-63299356 None:intergenic 20.0%
!!! TGACTTACTCTTTTTTTAAA+TGG + chr8_1:63299338-63299357 None:intergenic 20.0%
!!! CAATATGTTTTTTATATGCA+AGG - chr8_1:63299407-63299426 Msa1206330:intron 20.0%
!!! TATATAAAGGAGTAAGTTTT+TGG + chr8_1:63299545-63299564 None:intergenic 20.0%
!!! ATGATATTGGATTTTTTTGA+AGG - chr8_1:63299586-63299605 Msa1206330:intron 20.0%
!! TTTGAAGGATAATATGATAT+TGG - chr8_1:63299601-63299620 Msa1206330:intron 20.0%
!! GTAAACCATATTAAAATAAC+TGG + chr8_1:63300001-63300020 None:intergenic 20.0%
!!! TTTTTCTTTACTTACTTGAA+TGG + chr8_1:63300301-63300320 None:intergenic 20.0%
!! ATACATATGCACTAAAAAAT+TGG - chr8_1:63300370-63300389 Msa1206330:intron 20.0%
!!! CAATATTGATAGCATATATT+GGG - chr8_1:63300584-63300603 Msa1206330:intron 20.0%
!! ACATAATTAGTAATTACCAT+AGG + chr8_1:63301377-63301396 None:intergenic 20.0%
!! AAAAAGTGACAAAGAAAATA+AGG + chr8_1:63301408-63301427 None:intergenic 20.0%
!!! AGTATTCATTTATTTCAAGT+TGG - chr8_1:63301431-63301450 Msa1206330:intron 20.0%
!! ACAATTAATACAAAATCTCA+AGG - chr8_1:63302037-63302056 Msa1206330:intron 20.0%
!! AAGATATATTAGGTAAAGAA+GGG - chr8_1:63302183-63302202 Msa1206330:CDS 20.0%
!! GATATAGATCCTCTAAAAAA+AGG + chr8_1:63293973-63293992 None:intergenic 25.0%
! ATTAATTATATGTGTCATGC+AGG - chr8_1:63294042-63294061 Msa1206330:CDS 25.0%
! ATGAAAACGTATTTGATCAT+GGG + chr8_1:63294238-63294257 None:intergenic 25.0%
! AATGAAAACGTATTTGATCA+TGG + chr8_1:63294239-63294258 None:intergenic 25.0%
!! AATACGTTTTCATTGTCTTA+TGG - chr8_1:63294245-63294264 Msa1206330:CDS 25.0%
!! ATACGTTTTCATTGTCTTAT+GGG - chr8_1:63294246-63294265 Msa1206330:CDS 25.0%
! TTATGTTATAGGCGTTAAAA+TGG + chr8_1:63294398-63294417 None:intergenic 25.0%
!!! TGTTTGCTATGTTATGTTAT+AGG + chr8_1:63294409-63294428 None:intergenic 25.0%
!! ATACTATTTTATTGTTGCAC+GGG - chr8_1:63295513-63295532 Msa1206330:intron 25.0%
!!! TTATTTTGAAGATGTGTGTT+TGG - chr8_1:63295838-63295857 Msa1206330:intron 25.0%
! AAAAAAAAAAACCTAAACCG+TGG + chr8_1:63295884-63295903 None:intergenic 25.0%
! AGGTCAAAATCTAGAAAAAA+AGG - chr8_1:63296298-63296317 Msa1206330:CDS 25.0%
!!! GAATCGTTTTTATTTTCCAT+AGG - chr8_1:63296357-63296376 Msa1206330:CDS 25.0%
!!! TAAGCAACTTTTCACTTTTT+AGG + chr8_1:63296483-63296502 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - chr8_1:63296813-63296832 Msa1206330:intron 25.0%
! TGCATAATATATACAAGGTT+TGG - chr8_1:63296818-63296837 Msa1206330:intron 25.0%
! GCATAATATATACAAGGTTT+GGG - chr8_1:63296819-63296838 Msa1206330:intron 25.0%
! CATAATATATACAAGGTTTG+GGG - chr8_1:63296820-63296839 Msa1206330:intron 25.0%
!!! TTGGAATTTTGATACATTGA+AGG + chr8_1:63297038-63297057 None:intergenic 25.0%
! AAAGGGTTATTTAAGCTTTA+GGG + chr8_1:63297099-63297118 None:intergenic 25.0%
! TAAAGGGTTATTTAAGCTTT+AGG + chr8_1:63297100-63297119 None:intergenic 25.0%
! GAGTTATTGTGAGTATTAAA+GGG + chr8_1:63297116-63297135 None:intergenic 25.0%
! AGAGTTATTGTGAGTATTAA+AGG + chr8_1:63297117-63297136 None:intergenic 25.0%
! ACAATAAGTAAGTCTATTGA+AGG - chr8_1:63297190-63297209 Msa1206330:intron 25.0%
!!! TTTGTTATTTCGATACATTG+AGG - chr8_1:63297290-63297309 Msa1206330:intron 25.0%
!!! TTGTTATTTCGATACATTGA+GGG - chr8_1:63297291-63297310 Msa1206330:intron 25.0%
!! ATATTTGGAATGATGAAAGT+GGG + chr8_1:63297680-63297699 None:intergenic 25.0%
!! AATATTTGGAATGATGAAAG+TGG + chr8_1:63297681-63297700 None:intergenic 25.0%
!!! TAACTATTTTGAATGGATGT+AGG - chr8_1:63298088-63298107 Msa1206330:CDS 25.0%
! CATTATATTCGTTGATATGT+AGG - chr8_1:63298122-63298141 Msa1206330:CDS 25.0%
!!! CAAGCTTTTGTTTCAATTTA+TGG + chr8_1:63298243-63298262 None:intergenic 25.0%
!!! ACTTTTACTTCTAGCTATAA+TGG - chr8_1:63298288-63298307 Msa1206330:intron 25.0%
!!! CTTTTACTTCTAGCTATAAT+GGG - chr8_1:63298289-63298308 Msa1206330:intron 25.0%
! TTAAGTTAAAATTGTTGCCA+CGG + chr8_1:63299014-63299033 None:intergenic 25.0%
! GATATCGAAAATTCATTGTT+AGG - chr8_1:63299263-63299282 Msa1206330:intron 25.0%
! AGTAAATGAAAAGTGAGATT+AGG + chr8_1:63299366-63299385 None:intergenic 25.0%
! TTGGTTATTTAATCAAAACG+AGG - chr8_1:63299476-63299495 Msa1206330:intron 25.0%
!!! TTGCTCCAGTTATTTTAATA+TGG - chr8_1:63299993-63300012 Msa1206330:intron 25.0%
! ATATGGTTTACATTTATTGG+TGG - chr8_1:63300010-63300029 Msa1206330:intron 25.0%
!! TTTACATTTATTGGTGGTAT+TGG - chr8_1:63300016-63300035 Msa1206330:intron 25.0%
! ACCAAGATACATATTATCAT+AGG - chr8_1:63300231-63300250 Msa1206330:intron 25.0%
! TCCTATGATAATATGTATCT+TGG + chr8_1:63300235-63300254 None:intergenic 25.0%
! ATATATGCTATCAATATTGC+AGG + chr8_1:63300583-63300602 None:intergenic 25.0%
!! GCAATATTGATAGCATATAT+TGG - chr8_1:63300583-63300602 Msa1206330:intron 25.0%
! TTAATCTACCAATAATTACC+TGG + chr8_1:63300670-63300689 None:intergenic 25.0%
! TAAGAGAAAACATATGCAAT+TGG - chr8_1:63300694-63300713 Msa1206330:intron 25.0%
! CAATTGGAAAATTCATAATC+TGG - chr8_1:63300710-63300729 Msa1206330:intron 25.0%
! AAAAAATCAAATGTCAGGAT+TGG + chr8_1:63300791-63300810 None:intergenic 25.0%
! GGAAAGTTCAGAATAAAATT+CGG + chr8_1:63300832-63300851 None:intergenic 25.0%
!! ATATTGTCTAATTAATGGAC+CGG + chr8_1:63300958-63300977 None:intergenic 25.0%
! CATTGAATTATTAACGTATC+TGG - chr8_1:63301027-63301046 Msa1206330:intron 25.0%
!!! CACTTATAATGCTTGTTATA+TGG - chr8_1:63301514-63301533 Msa1206330:intron 25.0%
!!! ATCCTTTTCTTTTTTGGATT+TGG - chr8_1:63301558-63301577 Msa1206330:intron 25.0%
! TACCAAATCCAAAAAAGAAA+AGG + chr8_1:63301563-63301582 None:intergenic 25.0%
! TACGTTCTTGACAATAATTA+TGG - chr8_1:63301656-63301675 Msa1206330:intron 25.0%
! ACGTTCTTGACAATAATTAT+GGG - chr8_1:63301657-63301676 Msa1206330:intron 25.0%
! TGACAATAATTATGGGAATT+TGG - chr8_1:63301664-63301683 Msa1206330:intron 25.0%
! GATCAAATGGAAGATATATT+AGG - chr8_1:63302173-63302192 Msa1206330:CDS 25.0%
! GAAGATATATTAGGTAAAGA+AGG - chr8_1:63302182-63302201 Msa1206330:CDS 25.0%
! AATAGAATAATCCCAAGTAA+AGG - chr8_1:63302230-63302249 Msa1206330:CDS 25.0%
!! ATAAACTTTATTTCCTCTTC+AGG + chr8_1:63302344-63302363 None:intergenic 25.0%
! TATAGATAAAGCAACAGAAA+AGG - chr8_1:63302361-63302380 Msa1206330:intron 25.0%
! ATAGATAAAGCAACAGAAAA+GGG - chr8_1:63302362-63302381 Msa1206330:intron 25.0%
AAAGAAGCTGAAAGATAGAA+AGG - chr8_1:63293837-63293856 Msa1206330:CDS 30.0%
AAAAATATGCATGAAGACCT+TGG + chr8_1:63293941-63293960 None:intergenic 30.0%
!!! CACATATACCCTTTTTTTAG+AGG - chr8_1:63293961-63293980 Msa1206330:CDS 30.0%
CAAAGCATAGGAATTGTATA+TGG - chr8_1:63294097-63294116 Msa1206330:CDS 30.0%
GGAATTGTATATGGTGATAT+TGG - chr8_1:63294106-63294125 Msa1206330:CDS 30.0%
TATGCAAGTACTTTCACTAA+AGG - chr8_1:63294148-63294167 Msa1206330:CDS 30.0%
ATGCAAGTACTTTCACTAAA+GGG - chr8_1:63294149-63294168 Msa1206330:CDS 30.0%
AAAAACAACGATGACATTCT+TGG - chr8_1:63294175-63294194 Msa1206330:CDS 30.0%
ACAGTGTGAGAATTTAATAG+TGG - chr8_1:63294600-63294619 Msa1206330:CDS 30.0%
ACTTCAATGACAAGTTTGTA+AGG + chr8_1:63294647-63294666 None:intergenic 30.0%
TTCAAAGATTGACCAAGTTT+CGG - chr8_1:63294697-63294716 Msa1206330:CDS 30.0%
! ACTATCTGATTTATTAGCCT+TGG - chr8_1:63294780-63294799 Msa1206330:CDS 30.0%
!! CAAATTTGACTCTAAAACCA+AGG + chr8_1:63294800-63294819 None:intergenic 30.0%
ATTGGATCTAGCTAAACTTA+TGG + chr8_1:63294824-63294843 None:intergenic 30.0%
TTGTTACTCCATTATATGCA+CGG + chr8_1:63294965-63294984 None:intergenic 30.0%
!! ACCTTGGAAAGTATTAACTT+GGG + chr8_1:63295105-63295124 None:intergenic 30.0%
!! TACCTTGGAAAGTATTAACT+TGG + chr8_1:63295106-63295125 None:intergenic 30.0%
AAAAAATACCTAAGGTAGGT+GGG + chr8_1:63295143-63295162 None:intergenic 30.0%
AAAAAAATACCTAAGGTAGG+TGG + chr8_1:63295144-63295163 None:intergenic 30.0%
! ACGGGTTAAAGATTATTCAT+TGG + chr8_1:63295257-63295276 None:intergenic 30.0%
! TAAGATTCAAGTGTCATTGA+AGG + chr8_1:63295357-63295376 None:intergenic 30.0%
AAGAGCTATGTAATTTACCA+CGG - chr8_1:63295864-63295883 Msa1206330:intron 30.0%
TATGTAATTTACCACGGTTT+AGG - chr8_1:63295870-63295889 Msa1206330:intron 30.0%
! TAGAGATTGTTGCATTTTAG+AGG - chr8_1:63296122-63296141 Msa1206330:intron 30.0%
AGGTAATTGTCAGGTTAAAT+TGG - chr8_1:63296142-63296161 Msa1206330:intron 30.0%
GGTAATTGTCAGGTTAAATT+GGG - chr8_1:63296143-63296162 Msa1206330:intron 30.0%
GTAATTGTCAGGTTAAATTG+GGG - chr8_1:63296144-63296163 Msa1206330:intron 30.0%
! CATTTTAGATGGAATTCGTT+AGG - chr8_1:63296172-63296191 Msa1206330:intron 30.0%
! TAACCTAATGCAGCATTTTA+GGG - chr8_1:63296207-63296226 Msa1206330:CDS 30.0%
!! GCATTTTAGGGGAAATTATT+AGG - chr8_1:63296219-63296238 Msa1206330:CDS 30.0%
TTATTTCGTTTGAACACCTA+TGG + chr8_1:63296376-63296395 None:intergenic 30.0%
!!! TCACTTTTTAGGTTCATAAG+TGG + chr8_1:63296472-63296491 None:intergenic 30.0%
TTGCTAAAAGACACATTCAT+GGG + chr8_1:63296551-63296570 None:intergenic 30.0%
CTAAAAGACACCTTCATAAA+AGG - chr8_1:63296677-63296696 Msa1206330:intron 30.0%
! TACACCCACTCTTATAATTT+TGG - chr8_1:63296963-63296982 Msa1206330:intron 30.0%
! ACACCCACTCTTATAATTTT+GGG - chr8_1:63296964-63296983 Msa1206330:intron 30.0%
TACCCCAAAATTATAAGAGT+GGG + chr8_1:63296970-63296989 None:intergenic 30.0%
TTACCCCAAAATTATAAGAG+TGG + chr8_1:63296971-63296990 None:intergenic 30.0%
!!! GACTATTTTAACTCACAAAG+TGG + chr8_1:63297077-63297096 None:intergenic 30.0%
TATAGGAGAAATAGTCACTT+TGG + chr8_1:63297349-63297368 None:intergenic 30.0%
TTGCAATTTATCTGCATTCA+GGG + chr8_1:63297442-63297461 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG + chr8_1:63297443-63297462 None:intergenic 30.0%
ACTAACAAAGTCTACATTCA+GGG + chr8_1:63297471-63297490 None:intergenic 30.0%
TTTGCATATTATCTGCATTC+AGG - chr8_1:63297591-63297610 Msa1206330:intron 30.0%
TTGCATATTATCTGCATTCA+GGG - chr8_1:63297592-63297611 Msa1206330:intron 30.0%
!! AGTTGTCGCTTATTTTTCTA+CGG - chr8_1:63297830-63297849 Msa1206330:intron 30.0%
CTAGCTTAAACAAATGTTCA+GGG - chr8_1:63297931-63297950 Msa1206330:intron 30.0%
GTTTATCCTTGCAATATTAG+CGG - chr8_1:63297978-63297997 Msa1206330:intron 30.0%
TAGGCATATAAAGATGAGTT+TGG - chr8_1:63298141-63298160 Msa1206330:CDS 30.0%
TATAACCAACCTGAAATAGA+TGG + chr8_1:63298349-63298368 None:intergenic 30.0%
AACCAATGTTCAATACAAGA+AGG - chr8_1:63298548-63298567 Msa1206330:intron 30.0%
ATCCTTCTTGTATTGAACAT+TGG + chr8_1:63298553-63298572 None:intergenic 30.0%
CTTTGCTGATGTGAATATAT+GGG + chr8_1:63298769-63298788 None:intergenic 30.0%
ACTTTGCTGATGTGAATATA+TGG + chr8_1:63298770-63298789 None:intergenic 30.0%
CAAAAGATGTAAGATGGTTA+CGG - chr8_1:63298901-63298920 Msa1206330:intron 30.0%
ACTAAAAACCCAATTACACT+TGG - chr8_1:63299383-63299402 Msa1206330:intron 30.0%
CATATTGACCAAGTGTAATT+GGG + chr8_1:63299394-63299413 None:intergenic 30.0%
ACATATTGACCAAGTGTAAT+TGG + chr8_1:63299395-63299414 None:intergenic 30.0%
CTAACTCAAAAGAGTGAAAT+TGG - chr8_1:63299457-63299476 Msa1206330:intron 30.0%
!! AGTAAGTTTTTGGATTGGAT+TGG + chr8_1:63299535-63299554 None:intergenic 30.0%
!! AAAGGAGTAAGTTTTTGGAT+TGG + chr8_1:63299540-63299559 None:intergenic 30.0%
! TTTTAATGCATGAGAATGCT+CGG - chr8_1:63299871-63299890 Msa1206330:intron 30.0%
CAAATCGTTGCATACAAAAT+AGG + chr8_1:63299949-63299968 None:intergenic 30.0%
! CTATTTTGTATGCAACGATT+TGG - chr8_1:63299947-63299966 Msa1206330:intron 30.0%
GTTGATTACTTCAAACGAAA+TGG - chr8_1:63300100-63300119 Msa1206330:intron 30.0%
TTACTTCAAACGAAATGGTA+AGG - chr8_1:63300105-63300124 Msa1206330:intron 30.0%
ACATATTATCATAGGATCTG+AGG - chr8_1:63300239-63300258 Msa1206330:intron 30.0%
CATATGCACTAAAAAATTGG+TGG - chr8_1:63300373-63300392 Msa1206330:intron 30.0%
AAGAAAGTTTCCTGAAAAAG+TGG - chr8_1:63300621-63300640 Msa1206330:intron 30.0%
AGAAAGTTTCCTGAAAAAGT+GGG - chr8_1:63300622-63300641 Msa1206330:intron 30.0%
ACAGTATACCAGGTAATTAT+TGG - chr8_1:63300659-63300678 Msa1206330:intron 30.0%
! TATTGTCTAATTAATGGACC+GGG + chr8_1:63300957-63300976 None:intergenic 30.0%
AAGATTCTCCTCCTATATTT+AGG + chr8_1:63300997-63301016 None:intergenic 30.0%
TATGAACAACCTTAACTCTA+GGG + chr8_1:63301243-63301262 None:intergenic 30.0%
ATCAACTACATGTTCTTGAT+TGG - chr8_1:63301301-63301320 Msa1206330:intron 30.0%
AAGTTGGAAATGCTTAATGT+AGG - chr8_1:63301447-63301466 Msa1206330:intron 30.0%
AGTTGGAAATGCTTAATGTA+GGG - chr8_1:63301448-63301467 Msa1206330:intron 30.0%
!! TAATGCTTGTTATATGGAAG+AGG - chr8_1:63301520-63301539 Msa1206330:intron 30.0%
TTATATGGAAGAGGAGTTTA+TGG - chr8_1:63301529-63301548 Msa1206330:intron 30.0%
! ATGGTCATCCTTTTCTTTTT+TGG - chr8_1:63301552-63301571 Msa1206330:intron 30.0%
CAAATAACCAAGTTCACAAA+AGG - chr8_1:63301609-63301628 Msa1206330:intron 30.0%
ATAAAGTGAGGAAATATTGG+AGG + chr8_1:63301831-63301850 None:intergenic 30.0%
GCTATAAAGTGAGGAAATAT+TGG + chr8_1:63301834-63301853 None:intergenic 30.0%
CGAAATATTCTATACTCTCT+TGG + chr8_1:63301960-63301979 None:intergenic 30.0%
TAATTGTGACTCAAATTCCA+CGG + chr8_1:63302024-63302043 None:intergenic 30.0%
! ACAAGAGAATTTTATGCTTG+AGG - chr8_1:63302070-63302089 Msa1206330:CDS 30.0%
TTTATGCTTGAGGTTAATGA+AGG - chr8_1:63302080-63302099 Msa1206330:CDS 30.0%
TTCTATGAACCTATCATTCA+AGG - chr8_1:63302317-63302336 Msa1206330:intron 30.0%
TGTTCAAAACGGAAGAATTT+GGG + chr8_1:63302427-63302446 None:intergenic 30.0%
TTGTTCAAAACGGAAGAATT+TGG + chr8_1:63302428-63302447 None:intergenic 30.0%
GACAACAATCTTGTTCAAAA+CGG + chr8_1:63302438-63302457 None:intergenic 30.0%
!! TGAAAGATAGAAAGGTGTCA+TGG - chr8_1:63293845-63293864 Msa1206330:CDS 35.0%
!! GAAAGATAGAAAGGTGTCAT+GGG - chr8_1:63293846-63293865 Msa1206330:CDS 35.0%
AATTATATGTGTCATGCAGG+TGG - chr8_1:63294045-63294064 Msa1206330:CDS 35.0%
ATTATATGTGTCATGCAGGT+GGG - chr8_1:63294046-63294065 Msa1206330:CDS 35.0%
AGTTTGGCATTTCAAAGCAT+AGG - chr8_1:63294085-63294104 Msa1206330:CDS 35.0%
GTACTTGCATACACATAAAG+TGG + chr8_1:63294139-63294158 None:intergenic 35.0%
TGTTACTCCATTATATGCAC+GGG + chr8_1:63294964-63294983 None:intergenic 35.0%
!! TGGAAAGTATTAACTTGGGA+AGG + chr8_1:63295101-63295120 None:intergenic 35.0%
TCCCAAGTTAATACTTTCCA+AGG - chr8_1:63295101-63295120 Msa1206330:CDS 35.0%
! GTTTTTGTTGGGTATTACCT+TGG + chr8_1:63295121-63295140 None:intergenic 35.0%
GTTGTGAGAAAACATACCTA+GGG + chr8_1:63295185-63295204 None:intergenic 35.0%
AGTTGTGAGAAAACATACCT+AGG + chr8_1:63295186-63295205 None:intergenic 35.0%
ATCTTTAACCCGTAAGATCA+TGG - chr8_1:63295264-63295283 Msa1206330:intron 35.0%
TCTTTAACCCGTAAGATCAT+GGG - chr8_1:63295265-63295284 Msa1206330:intron 35.0%
!! TTTTGAGAGAAACACGGTTT+AGG - chr8_1:63295901-63295920 Msa1206330:intron 35.0%
TTTGAGAGAAACACGGTTTA+GGG - chr8_1:63295902-63295921 Msa1206330:intron 35.0%
TATATATAGCCGAGTTTGCA+TGG - chr8_1:63295930-63295949 Msa1206330:intron 35.0%
TCCTAATTTCCATGCAAACT+CGG + chr8_1:63295968-63295987 None:intergenic 35.0%
AAACGATGACACAACATGAT+AGG - chr8_1:63296069-63296088 Msa1206330:CDS 35.0%
!! GCATTTTAGAGGTAATTGTC+AGG - chr8_1:63296133-63296152 Msa1206330:intron 35.0%
! CTAACCTAATGCAGCATTTT+AGG - chr8_1:63296206-63296225 Msa1206330:CDS 35.0%
! AACCTAATGCAGCATTTTAG+GGG - chr8_1:63296208-63296227 Msa1206330:CDS 35.0%
! AAGTTGCTTACATTTGAGAC+CGG - chr8_1:63296493-63296512 Msa1206330:intron 35.0%
CTTGCTAAAAGACACATTCA+TGG + chr8_1:63296552-63296571 None:intergenic 35.0%
! CTAGAAGACACCTTTTATGA+AGG + chr8_1:63296690-63296709 None:intergenic 35.0%
TATATATATTGTGGTGGTCC+AGG + chr8_1:63296852-63296871 None:intergenic 35.0%
! CACCCACTCTTATAATTTTG+GGG - chr8_1:63296965-63296984 Msa1206330:intron 35.0%
!!! TTTTGGGGTAATAGTCACTT+TGG - chr8_1:63296980-63296999 Msa1206330:intron 35.0%
GACTAATTGCTACACATTCA+GGG + chr8_1:63297007-63297026 None:intergenic 35.0%
TGACTAATTGCTACACATTC+AGG + chr8_1:63297008-63297027 None:intergenic 35.0%
CGAAATAACAAAATAGTCCC+TGG + chr8_1:63297282-63297301 None:intergenic 35.0%
GACTAACAAAGTCTACATTC+AGG + chr8_1:63297472-63297491 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG + chr8_1:63297486-63297505 None:intergenic 35.0%
ACTAACGAAGTCTACATTCA+GGG + chr8_1:63297535-63297554 None:intergenic 35.0%
AATCACTGTAGTCCTTGAAT+GGG + chr8_1:63297638-63297657 None:intergenic 35.0%
TAATCACTGTAGTCCTTGAA+TGG + chr8_1:63297639-63297658 None:intergenic 35.0%
AAAGTGGGTGTATAAAACTG+GGG + chr8_1:63297665-63297684 None:intergenic 35.0%
GAAAGTGGGTGTATAAAACT+GGG + chr8_1:63297666-63297685 None:intergenic 35.0%
TGAAAGTGGGTGTATAAAAC+TGG + chr8_1:63297667-63297686 None:intergenic 35.0%
! GCTAGCTTAAACAAATGTTC+AGG - chr8_1:63297930-63297949 Msa1206330:intron 35.0%
TAACAACCGCTAATATTGCA+AGG + chr8_1:63297987-63298006 None:intergenic 35.0%
!! CTATTTTGAATGGATGTAGG+TGG - chr8_1:63298091-63298110 Msa1206330:CDS 35.0%
!! ATGTCTTCAGGTTGTTGATT+GGG + chr8_1:63298169-63298188 None:intergenic 35.0%
ATTCTCACTCCATCTATTTC+AGG - chr8_1:63298337-63298356 Msa1206330:intron 35.0%
CAAGAGGAGACAAAAGTAAT+TGG - chr8_1:63298474-63298493 Msa1206330:intron 35.0%
CATAGAATTCTGAATCACCA+TGG - chr8_1:63298685-63298704 Msa1206330:intron 35.0%
! AAAGTGAATAGCATCGAGTA+AGG - chr8_1:63298785-63298804 Msa1206330:intron 35.0%
!!! AAATATGACAGTTTTGGAGG+GGG + chr8_1:63298820-63298839 None:intergenic 35.0%
!!! CAAATATGACAGTTTTGGAG+GGG + chr8_1:63298821-63298840 None:intergenic 35.0%
!!! GCAAATATGACAGTTTTGGA+GGG + chr8_1:63298822-63298841 None:intergenic 35.0%
AACACGCAAAAGATGTAAGA+TGG - chr8_1:63298895-63298914 Msa1206330:intron 35.0%
TTTAATGCATGAGAATGCTC+GGG - chr8_1:63299872-63299891 Msa1206330:intron 35.0%
TAGGACAACCAAAATTGCTA+CGG + chr8_1:63299930-63299949 None:intergenic 35.0%
!! ACGATTTGGTACTGATAAAG+TGG - chr8_1:63299961-63299980 Msa1206330:intron 35.0%
!! CGATTTGGTACTGATAAAGT+GGG - chr8_1:63299962-63299981 Msa1206330:intron 35.0%
TTCAAACGAAATGGTAAGGA+AGG - chr8_1:63300109-63300128 Msa1206330:intron 35.0%
! GGAGTCTTTTTATGCATAAC+AGG - chr8_1:63300148-63300167 Msa1206330:intron 35.0%
! ACAAGTTCTAACTTCATGCT+TGG - chr8_1:63300430-63300449 Msa1206330:intron 35.0%
GAAAGTTTCCTGAAAAAGTG+GGG - chr8_1:63300623-63300642 Msa1206330:intron 35.0%
!!! AATGTATTCCCCACTTTTTC+AGG + chr8_1:63300634-63300653 None:intergenic 35.0%
ACATTCTATGACAGTATACC+AGG - chr8_1:63300649-63300668 Msa1206330:intron 35.0%
TTCATAATCTGGATTCTCTG+CGG - chr8_1:63300721-63300740 Msa1206330:intron 35.0%
GACAATATTATTACTCCCTC+CGG - chr8_1:63300970-63300989 Msa1206330:intron 35.0%
ACAAATGTTGGCCAATACAA+GGG + chr8_1:63301130-63301149 None:intergenic 35.0%
AACAAATGTTGGCCAATACA+AGG + chr8_1:63301131-63301150 None:intergenic 35.0%
! CATTGCTTGACTAGCTATAA+TGG + chr8_1:63301170-63301189 None:intergenic 35.0%
ACTAAGGGCTTGTGATATAA+TGG + chr8_1:63301209-63301228 None:intergenic 35.0%
GTATGAACAACCTTAACTCT+AGG + chr8_1:63301244-63301263 None:intergenic 35.0%
CATACTTCAACTAAGCATCA+AGG - chr8_1:63301259-63301278 Msa1206330:intron 35.0%
AAGAACATGTAGTTGATCTC+TGG + chr8_1:63301298-63301317 None:intergenic 35.0%
!! GATATTTTCTGTGGTCTTGA+AGG + chr8_1:63301347-63301366 None:intergenic 35.0%
GAAAATATCAGTCATGCCTA+TGG - chr8_1:63301358-63301377 Msa1206330:intron 35.0%
! AATGTAGGGATTGCTGTTAT+TGG - chr8_1:63301462-63301481 Msa1206330:intron 35.0%
ATAACCAAGTTCACAAAAGG+AGG - chr8_1:63301612-63301631 Msa1206330:intron 35.0%
! ATATCCTCCTTTTGTGAACT+TGG + chr8_1:63301619-63301638 None:intergenic 35.0%
AAGAACGTAGCTAGTACAAT+TGG + chr8_1:63301645-63301664 None:intergenic 35.0%
AGTTTCTACCGAGTATTTGA+AGG - chr8_1:63301731-63301750 Msa1206330:intron 35.0%
TACCGAGTATTTGAAGGAAT+TGG - chr8_1:63301737-63301756 Msa1206330:intron 35.0%
GAATACAAAAGTCCAATTCC+AGG + chr8_1:63301789-63301808 None:intergenic 35.0%
ACAACAACTGAATGAATGGA+TGG + chr8_1:63301864-63301883 None:intergenic 35.0%
GAACACAACAACTGAATGAA+TGG + chr8_1:63301868-63301887 None:intergenic 35.0%
TCCAAAGCAACTCTATTAAC+CGG + chr8_1:63301909-63301928 None:intergenic 35.0%
GAATATTTCGATGTGTTGCA+AGG - chr8_1:63301970-63301989 Msa1206330:intron 35.0%
AATTGTGACTCAAATTCCAC+GGG + chr8_1:63302023-63302042 None:intergenic 35.0%
TCACTCTCATTAGTGGAAAT+AGG + chr8_1:63302155-63302174 None:intergenic 35.0%
CATTTGATCACTCTCATTAG+TGG + chr8_1:63302162-63302181 None:intergenic 35.0%
CACTAATGAGAGTGATCAAA+TGG - chr8_1:63302160-63302179 Msa1206330:CDS 35.0%
TTAGGTAAAGAAGGGAAATC+AGG - chr8_1:63302191-63302210 Msa1206330:CDS 35.0%
TAGGTAAAGAAGGGAAATCA+GGG - chr8_1:63302192-63302211 Msa1206330:CDS 35.0%
AAGGGAGTGGTATATATGAT+AGG - chr8_1:63302380-63302399 Msa1206330:intron 35.0%
ATATATGATAGGTGAAGCAG+AGG - chr8_1:63302391-63302410 Msa1206330:intron 35.0%
TCGTGTAGACTCTCTCAATT+TGG - chr8_1:63293879-63293898 Msa1206330:CDS 40.0%
GAATGCAAACCACAATTCCA+AGG - chr8_1:63293921-63293940 Msa1206330:CDS 40.0%
TAGCTAGTTGAACCGAAACT+TGG + chr8_1:63294712-63294731 None:intergenic 40.0%
TTTCGGTTCAACTAGCTAGT+TGG - chr8_1:63294714-63294733 Msa1206330:CDS 40.0%
GTTACTCCATTATATGCACG+GGG + chr8_1:63294963-63294982 None:intergenic 40.0%
!! AAGGTAGGTGGGTTTTTGTT+GGG + chr8_1:63295132-63295151 None:intergenic 40.0%
!! TAAGGTAGGTGGGTTTTTGT+TGG + chr8_1:63295133-63295152 None:intergenic 40.0%
AACAAAAACCCACCTACCTT+AGG - chr8_1:63295132-63295151 Msa1206330:CDS 40.0%
! TTTTTACGGAAACCTACCCT+AGG - chr8_1:63295166-63295185 Msa1206330:intron 40.0%
TGAGAAAACATACCTAGGGT+AGG + chr8_1:63295181-63295200 None:intergenic 40.0%
TTGATCGACCCATGATCTTA+CGG + chr8_1:63295276-63295295 None:intergenic 40.0%
CCCTAATTTCCATGCAAACT+CGG + chr8_1:63295942-63295961 None:intergenic 40.0%
CCGAGTTTGCATGGAAATTA+GGG - chr8_1:63295939-63295958 Msa1206330:intron 40.0%
TTCCCCTAAAATGCTGCATT+AGG + chr8_1:63296213-63296232 None:intergenic 40.0%
GGATAAGGATTTGGATGAAC+AGG - chr8_1:63296278-63296297 Msa1206330:CDS 40.0%
AACCCTATATATACTCCCTC+CGG + chr8_1:63296515-63296534 None:intergenic 40.0%
! TTTTAGCAAGTCACACCTCA+AGG - chr8_1:63296562-63296581 Msa1206330:intron 40.0%
AAAGTGGAAATCACACCTTG+AGG + chr8_1:63296580-63296599 None:intergenic 40.0%
! TGGACAATCAGGGACTATTT+TGG + chr8_1:63297057-63297076 None:intergenic 40.0%
ACTCACAAAGTGGACAATCA+GGG + chr8_1:63297067-63297086 None:intergenic 40.0%
AACTCACAAAGTGGACAATC+AGG + chr8_1:63297068-63297087 None:intergenic 40.0%
ACTAACAAAGTGCACAACCA+GGG - chr8_1:63297262-63297281 Msa1206330:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - chr8_1:63297395-63297414 Msa1206330:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - chr8_1:63297396-63297415 Msa1206330:intron 40.0%
GACTAACGAAGTCTACATTC+AGG + chr8_1:63297536-63297555 None:intergenic 40.0%
TCCCTTAAATTGACCATGCA+GGG - chr8_1:63297563-63297582 Msa1206330:intron 40.0%
TCCCTGCATGGTCAATTTAA+GGG + chr8_1:63297567-63297586 None:intergenic 40.0%
ATCACTGTAGTCCTTGAATG+GGG + chr8_1:63297637-63297656 None:intergenic 40.0%
!! CATGTCTTCAGGTTGTTGAT+TGG + chr8_1:63298170-63298189 None:intergenic 40.0%
CAATCAACAACCTGAAGACA+TGG - chr8_1:63298168-63298187 Msa1206330:CDS 40.0%
TTAGAGAGTTCCATGTCTTC+AGG + chr8_1:63298181-63298200 None:intergenic 40.0%
! ATTTATGGGCTCTTTTCTGC+TGG + chr8_1:63298228-63298247 None:intergenic 40.0%
! TCACTCCATCTATTTCAGGT+TGG - chr8_1:63298341-63298360 Msa1206330:intron 40.0%
GGTTGCTCATACTTTAGCTA+GGG + chr8_1:63298608-63298627 None:intergenic 40.0%
TGGTTGCTCATACTTTAGCT+AGG + chr8_1:63298609-63298628 None:intergenic 40.0%
TGTTAGGAGACAAGCAAACA+TGG + chr8_1:63298629-63298648 None:intergenic 40.0%
TGATGTGAATATATGGGACC+GGG + chr8_1:63298763-63298782 None:intergenic 40.0%
CTGATGTGAATATATGGGAC+CGG + chr8_1:63298764-63298783 None:intergenic 40.0%
!! GGCAAATATGACAGTTTTGG+AGG + chr8_1:63298823-63298842 None:intergenic 40.0%
! ACGGGCAAATATGACAGTTT+TGG + chr8_1:63298826-63298845 None:intergenic 40.0%
TTATTCGGGCTCAAACGAAA+TGG + chr8_1:63298851-63298870 None:intergenic 40.0%
ATGTAAGATGGTTACGGTCA+TGG - chr8_1:63298907-63298926 Msa1206330:intron 40.0%
GCAAGGTAACAACTCAATGT+GGG + chr8_1:63298979-63298998 None:intergenic 40.0%
TGCAAGGTAACAACTCAATG+TGG + chr8_1:63298980-63298999 None:intergenic 40.0%
ATGTCTTTCAGATGCTGTTG+TGG - chr8_1:63299898-63299917 Msa1206330:intron 40.0%
TGTCTTTCAGATGCTGTTGT+GGG - chr8_1:63299899-63299918 Msa1206330:intron 40.0%
AACGAAATGGTAAGGAAGGA+TGG - chr8_1:63300113-63300132 Msa1206330:intron 40.0%
AGTCACACATTCGTACATTG+GGG + chr8_1:63300908-63300927 None:intergenic 40.0%
CAGTCACACATTCGTACATT+GGG + chr8_1:63300909-63300928 None:intergenic 40.0%
TGGTTAACTGCAGAAAAACC+CGG - chr8_1:63300936-63300955 Msa1206330:intron 40.0%
! TCTCCTCCTATATTTAGGAC+CGG + chr8_1:63300992-63301011 None:intergenic 40.0%
CAAATGTTGGCCAATACAAG+GGG + chr8_1:63301129-63301148 None:intergenic 40.0%
! GTATTGGCCAACATTTGTTG+TGG - chr8_1:63301132-63301151 Msa1206330:intron 40.0%
CCAATAGCCACAACAAATGT+TGG + chr8_1:63301142-63301161 None:intergenic 40.0%
!! CCAACATTTGTTGTGGCTAT+TGG - chr8_1:63301139-63301158 Msa1206330:intron 40.0%
GCTAGTCAAGCAATGATTTC+AGG - chr8_1:63301175-63301194 Msa1206330:intron 40.0%
ATATCACAAGCCCTTAGTCT+AGG - chr8_1:63301211-63301230 Msa1206330:intron 40.0%
AGGGAAACAACCTAGACTAA+GGG + chr8_1:63301224-63301243 None:intergenic 40.0%
TAGGGAAACAACCTAGACTA+AGG + chr8_1:63301225-63301244 None:intergenic 40.0%
! AGGTTGTTTCCCTAGAGTTA+AGG - chr8_1:63301231-63301250 Msa1206330:intron 40.0%
! GGCATGACTGATATTTTCTG+TGG + chr8_1:63301356-63301375 None:intergenic 40.0%
ATGGAAGAGGAGTTTATGGA+TGG - chr8_1:63301533-63301552 Msa1206330:intron 40.0%
CGCCAATTCCTTCAAATACT+CGG + chr8_1:63301742-63301761 None:intergenic 40.0%
TTGTATTCCGAGCTTGTACA+AGG - chr8_1:63301801-63301820 Msa1206330:intron 40.0%
AGGAATTCCTTGTACAAGCT+CGG + chr8_1:63301811-63301830 None:intergenic 40.0%
GGTACACTAGCTATAAAGTG+AGG + chr8_1:63301843-63301862 None:intergenic 40.0%
CGTCTCTATCAAGACAATTC+CGG - chr8_1:63301887-63301906 Msa1206330:intron 40.0%
TCCGGTTAATAGAGTTGCTT+TGG - chr8_1:63301905-63301924 Msa1206330:intron 40.0%
!! ATAGAGTTGCTTTGGAAGAG+AGG - chr8_1:63301913-63301932 Msa1206330:intron 40.0%
!! GAGGTTTTTGTTTCGACAAG+TGG - chr8_1:63301932-63301951 Msa1206330:intron 40.0%
ACTTGCAGGCAATGATCTAA+TGG + chr8_1:63302279-63302298 None:intergenic 40.0%
! GATGATTTTCTCACACTTGC+AGG + chr8_1:63302293-63302312 None:intergenic 40.0%
TCTTCAGGTCCTTGAATGAT+AGG + chr8_1:63302329-63302348 None:intergenic 40.0%
TATCATTCAAGGACCTGAAG+AGG - chr8_1:63302328-63302347 Msa1206330:intron 40.0%
TAAAGCAACAGAAAAGGGAG+TGG - chr8_1:63302367-63302386 Msa1206330:intron 40.0%
TTGCGCAAGAACTTTAGACA+GGG - chr8_1:63302476-63302495 Msa1206330:five_prime_UTR 40.0%
! CTTTAAGAAGTCTCTTGCGT+GGG + chr8_1:63302520-63302539 None:intergenic 40.0%
! ACTTTAAGAAGTCTCTTGCG+TGG + chr8_1:63302521-63302540 None:intergenic 40.0%
CGCAAGAGACTTCTTAAAGT+TGG - chr8_1:63302521-63302540 Msa1206330:five_prime_UTR 40.0%
GGATGAGACAGAGACAACAA+AGG - chr8_1:63293804-63293823 Msa1206330:CDS 45.0%
GACTCTCTCAATTTGGAAGC+TGG - chr8_1:63293886-63293905 Msa1206330:CDS 45.0%
GCATGAAGACCTTGGAATTG+TGG + chr8_1:63293933-63293952 None:intergenic 45.0%
TTGGAGCGTGACATTGAGTT+TGG - chr8_1:63294069-63294088 Msa1206330:CDS 45.0%
GTCTTATGGGCCAATGACAA+TGG - chr8_1:63294259-63294278 Msa1206330:CDS 45.0%
CGTACCATTGCCATTGTCAT+TGG + chr8_1:63294272-63294291 None:intergenic 45.0%
CTAGTACCCCGTGCATATAA+TGG - chr8_1:63294954-63294973 Msa1206330:intron 45.0%
TGATCGACCCATGATCTTAC+GGG + chr8_1:63295275-63295294 None:intergenic 45.0%
GCCGAGTTTGCATGGAAATT+AGG - chr8_1:63295938-63295957 Msa1206330:intron 45.0%
GCCGAGTTTGCATGGAAATT+AGG - chr8_1:63295938-63295957 Msa1206330:intron 45.0%
GAATGAAAAGCTCATCAGCG+AGG - chr8_1:63296091-63296110 Msa1206330:intron 45.0%
! TTGCTTACATTTGAGACCGG+AGG - chr8_1:63296496-63296515 Msa1206330:intron 45.0%
! TGCTTACATTTGAGACCGGA+GGG - chr8_1:63296497-63296516 Msa1206330:intron 45.0%
! AGACCGGAGGGAGTATATAT+AGG - chr8_1:63296509-63296528 Msa1206330:intron 45.0%
! GACCGGAGGGAGTATATATA+GGG - chr8_1:63296510-63296529 Msa1206330:intron 45.0%
CACATTCATGGGTGACTTCT+AGG + chr8_1:63296540-63296559 None:intergenic 45.0%
GACTAACAAAGTGCACAACC+AGG - chr8_1:63297261-63297280 Msa1206330:intron 45.0%
GACTACTCGTCACTCATTCA+AGG - chr8_1:63297322-63297341 Msa1206330:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG - chr8_1:63297397-63297416 Msa1206330:intron 45.0%
ACTAACGGAGTCTGCATTCA+GGG + chr8_1:63297503-63297522 None:intergenic 45.0%
GTCCCTTAAATTGACCATGC+AGG - chr8_1:63297562-63297581 Msa1206330:intron 45.0%
GTCCCTGCATGGTCAATTTA+AGG + chr8_1:63297568-63297587 None:intergenic 45.0%
TATGCAAAACAGTCCCTGCA+TGG + chr8_1:63297579-63297598 None:intergenic 45.0%
! AGCTATAATGGGAACTGCCA+TGG - chr8_1:63298300-63298319 Msa1206330:intron 45.0%
TGCTCATACTTTAGCTAGGG+CGG + chr8_1:63298605-63298624 None:intergenic 45.0%
ATTCCCGGGGGCAATTTATT+CGG + chr8_1:63298866-63298885 None:intergenic 45.0%
TGTTGTGTTAGAGATTCCCG+GGG + chr8_1:63298879-63298898 None:intergenic 45.0%
GTGTTGTGTTAGAGATTCCC+GGG + chr8_1:63298880-63298899 None:intergenic 45.0%
CGTGTTGTGTTAGAGATTCC+CGG + chr8_1:63298881-63298900 None:intergenic 45.0%
GACATGGTTGAAGTGCAATG+TGG + chr8_1:63298943-63298962 None:intergenic 45.0%
TGTTACCTTGCACTCTACTC+AGG - chr8_1:63298988-63299007 Msa1206330:intron 45.0%
AGTGGGATCAGTACATCACT+GGG - chr8_1:63299744-63299763 Msa1206330:intron 45.0%
AAGGAAGGATGGCTATCACT+AGG - chr8_1:63300124-63300143 Msa1206330:intron 45.0%
! TGAGGCCATGTTTGCTGATT+TGG - chr8_1:63300257-63300276 Msa1206330:intron 45.0%
!! GAGGCCATGTTTGCTGATTT+GGG - chr8_1:63300258-63300277 Msa1206330:intron 45.0%
GTGACCCAAATCAGCAAACA+TGG + chr8_1:63300265-63300284 None:intergenic 45.0%
GCAGTCACACATTCGTACAT+TGG + chr8_1:63300910-63300929 None:intergenic 45.0%
GAATGTGTGACTGCAAGTTC+TGG - chr8_1:63300916-63300935 Msa1206330:intron 45.0%
! CTCCTATATTTAGGACCGGA+GGG + chr8_1:63300988-63301007 None:intergenic 45.0%
AACATGCAGACCCCTTGTAT+TGG - chr8_1:63301116-63301135 Msa1206330:intron 45.0%
! ACAAATGTACACAGAGTGCC+TGG - chr8_1:63301768-63301787 Msa1206330:intron 45.0%
GCGGTTACAATGATACGCTT+GGG - chr8_1:63301994-63302013 Msa1206330:intron 45.0%
CATGAGACGCACCTTTACTT+GGG + chr8_1:63302244-63302263 None:intergenic 45.0%
ACATGAGACGCACCTTTACT+TGG + chr8_1:63302245-63302264 None:intergenic 45.0%
CTTGCGCAAGAACTTTAGAC+AGG - chr8_1:63302475-63302494 Msa1206330:five_prime_UTR 45.0%
!! TATATATATATATATGTATT+TGG + chr8_1:63295754-63295773 None:intergenic 5.0%
!! ATATATATATATATATATTG+TGG + chr8_1:63296865-63296884 None:intergenic 5.0%
!! ACTATTATATTTATTAAAAT+CGG + chr8_1:63299235-63299254 None:intergenic 5.0%
TATGTGTCATGCAGGTGGGT+TGG - chr8_1:63294050-63294069 Msa1206330:CDS 50.0%
TGGGCCAATGACAATGGCAA+TGG - chr8_1:63294265-63294284 Msa1206330:CDS 50.0%
TTAGGGTAGCCGAGTTTGCA+TGG - chr8_1:63295956-63295975 Msa1206330:intron 50.0%
!!! TTGGGGCGCTGCATTTTAGA+TGG - chr8_1:63296161-63296180 Msa1206330:intron 50.0%
! TGAGCTCAGCTCAGTTGGTA+TGG - chr8_1:63296791-63296810 Msa1206330:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG + chr8_1:63297623-63297642 None:intergenic 50.0%
TGACGAATCGTTCCCCATTC+AGG + chr8_1:63297622-63297641 None:intergenic 50.0%
GACTAACGGAGTCTGCATTC+AGG + chr8_1:63297504-63297523 None:intergenic 50.0%
GACGAATCGTTCCCCATTCA+AGG - chr8_1:63297623-63297642 Msa1206330:intron 50.0%
!! GCTCTTTTCTGCTGGCTAGA+TGG + chr8_1:63298220-63298239 None:intergenic 50.0%
ATGGGAACTGCCATGGTCAT+AGG - chr8_1:63298307-63298326 Msa1206330:intron 50.0%
ACTGCCATGGTCATAGGTGA+CGG - chr8_1:63298313-63298332 Msa1206330:intron 50.0%
AATCCCGTCACCTATGACCA+TGG + chr8_1:63298320-63298339 None:intergenic 50.0%
GTGCAAGCTCTATCGTCTCT+AGG + chr8_1:63298711-63298730 None:intergenic 50.0%
AGTCAGACTCGAAGACAACC+CGG - chr8_1:63298742-63298761 Msa1206330:intron 50.0%
!!! TATGACAGTTTTGGAGGGGG+AGG + chr8_1:63298817-63298836 None:intergenic 50.0%
GGCTCAAACGAAATGGCAAC+GGG + chr8_1:63298844-63298863 None:intergenic 50.0%
GGGCTCAAACGAAATGGCAA+CGG + chr8_1:63298845-63298864 None:intergenic 50.0%
TTCCCGGGGGCAATTTATTC+GGG + chr8_1:63298865-63298884 None:intergenic 50.0%
GTTGTGTTAGAGATTCCCGG+GGG + chr8_1:63298878-63298897 None:intergenic 50.0%
ATGGTTACGGTCATGGAACG+CGG - chr8_1:63298914-63298933 Msa1206330:intron 50.0%
CACTTCAACCATGTCTCGCT+CGG - chr8_1:63298948-63298967 Msa1206330:intron 50.0%
CAGTGCTATCTGCAGTGAGT+GGG - chr8_1:63299727-63299746 Msa1206330:intron 50.0%
GAGTGGGATCAGTACATCAC+TGG - chr8_1:63299743-63299762 Msa1206330:intron 50.0%
! GGGCATCACCGTAGCAATTT+TGG - chr8_1:63299919-63299938 Msa1206330:intron 50.0%
GAAGGATGGCTATCACTAGG+TGG - chr8_1:63300127-63300146 Msa1206330:intron 50.0%
CTCCCTCCGGTCCTAAATAT+AGG - chr8_1:63300983-63301002 Msa1206330:intron 50.0%
! CCTCCTATATTTAGGACCGG+AGG + chr8_1:63300989-63301008 None:intergenic 50.0%
CCTCCGGTCCTAAATATAGG+AGG - chr8_1:63300986-63301005 Msa1206330:intron 50.0%
! GTACACAGAGTGCCTGGAAT+TGG - chr8_1:63301774-63301793 Msa1206330:intron 50.0%
TTTCGATGTGTTGCAAGGCG+CGG - chr8_1:63301975-63301994 Msa1206330:intron 50.0%
CGCGGTTACAATGATACGCT+TGG - chr8_1:63301993-63302012 Msa1206330:intron 50.0%
CCAACTGAGCTGAGCTCACA+AGG + chr8_1:63296789-63296808 None:intergenic 55.0%
CCTTGTGAGCTCAGCTCAGT+TGG - chr8_1:63296786-63296805 Msa1206330:intron 55.0%
! CAAGGTTTGGGGTTCGAACC+TGG - chr8_1:63296831-63296850 Msa1206330:intron 55.0%
CTGCCATGGTCATAGGTGAC+GGG - chr8_1:63298314-63298333 Msa1206330:intron 55.0%
! ACGGTGACTAGCCCAAGAAC+AGG - chr8_1:63298579-63298598 Msa1206330:intron 55.0%
GCTCTATCGTCTCTAGGCCA+TGG + chr8_1:63298705-63298724 None:intergenic 55.0%
GAGCCCGAATAAATTGCCCC+CGG - chr8_1:63298859-63298878 Msa1206330:intron 55.0%
AGCCCGAATAAATTGCCCCC+GGG - chr8_1:63298860-63298879 Msa1206330:intron 55.0%
GGGAAAAACCGAGCGAGACA+TGG + chr8_1:63298959-63298978 None:intergenic 55.0%
GCAGTGCTATCTGCAGTGAG+TGG - chr8_1:63299726-63299745 Msa1206330:intron 55.0%
TGATACGCTTGGGAATCCCG+TGG - chr8_1:63302004-63302023 Msa1206330:intron 55.0%
GACAAGACTCGTGCGTCGCA+CGG + chr8_1:63295220-63295239 None:intergenic 60.0%
AGCTAGGGCGGCCTGTTCTT+GGG + chr8_1:63298593-63298612 None:intergenic 60.0%
TAGCTAGGGCGGCCTGTTCT+TGG + chr8_1:63298594-63298613 None:intergenic 60.0%
CACGGCCTGAGTAGAGTGCA+AGG + chr8_1:63298996-63299015 None:intergenic 60.0%
CTTGCACTCTACTCAGGCCG+TGG - chr8_1:63298994-63299013 Msa1206330:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 63293790 63302562 63293790 ID=Msa1206330;Name=Msa1206330
chr8_1 mRNA 63293790 63302562 63293790 ID=Msa1206330-mRNA-1;Parent=Msa1206330;Name=Msa1206330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=129|0.87|0.66|1|1|0.77|9|0|754
chr8_1 exon 63293790 63294883 63293790 ID=Msa1206330-mRNA-1:exon:20549;Parent=Msa1206330-mRNA-1
chr8_1 exon 63294973 63295176 63294973 ID=Msa1206330-mRNA-1:exon:20548;Parent=Msa1206330-mRNA-1
chr8_1 exon 63295682 63295796 63295682 ID=Msa1206330-mRNA-1:exon:20547;Parent=Msa1206330-mRNA-1
chr8_1 exon 63296047 63296099 63296047 ID=Msa1206330-mRNA-1:exon:20546;Parent=Msa1206330-mRNA-1
chr8_1 exon 63296183 63296443 63296183 ID=Msa1206330-mRNA-1:exon:20545;Parent=Msa1206330-mRNA-1
chr8_1 exon 63296581 63296622 63296581 ID=Msa1206330-mRNA-1:exon:20544;Parent=Msa1206330-mRNA-1
chr8_1 exon 63297994 63298242 63297994 ID=Msa1206330-mRNA-1:exon:20543;Parent=Msa1206330-mRNA-1
chr8_1 exon 63302066 63302288 63302066 ID=Msa1206330-mRNA-1:exon:20542;Parent=Msa1206330-mRNA-1
chr8_1 exon 63302410 63302562 63302410 ID=Msa1206330-mRNA-1:exon:20541;Parent=Msa1206330-mRNA-1
chr8_1 five_prime_UTR 63302434 63302562 63302434 ID=Msa1206330-mRNA-1:five_prime_utr;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63302410 63302433 63302410 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63302066 63302288 63302066 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63297994 63298242 63297994 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63296581 63296622 63296581 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63296183 63296443 63296183 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63296047 63296099 63296047 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63295682 63295796 63295682 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63294973 63295176 63294973 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
chr8_1 CDS 63293790 63294883 63293790 ID=Msa1206330-mRNA-1:cds;Parent=Msa1206330-mRNA-1
Gene Sequence

>Msa1206330

ATGAATGCAAACCACAATTCCAAGGTGGGTTGGAGCGTGACATTGAGTTTGGCATTTCAAAGCATAGGAATTGTATATGGTGATATTGGTACATCTCCACTTTATGTGTATGCAAGTACTTTCACTAAAGGGATTAAAAACAACGATGACATTCTTGGAGTCTTGTCTCTCATCATCTACACTATTGTGCTCATACCCATGATCAAATACGTTTTCATTGTCTTATGGGCCAATGACAATGGCAATGGTGGAGCGTTTGCATTATATTCGTTGATATGTAGGCATATAAAGATGAGTTTGGCTCCCAATCAACAACCTGAAGACATGGAACTCTCTAATTACAAACTAGAAATACCATCTAGCCAGCAGAAAAGAGCCCATAAATTGAAACAAAAGCTTGAAAATAGTCATTTTTCACGGATTATACTTTTACTTCTAGCTATAATGGGAACTGCCATGGTCATAGGTGACGGGATTCTCACTCCATCTATTTCAGTGCTATCTGCAGTGAGTGGGATCAGTACATCACTGGGTCAAAATGCTGTTGTGGGCATCACCGTAGCAATTTTGGTTGTCCTATTTTGTATGCAACGATTTGGTACTGATAAAGTGGGAGTCACATTTGCTCCAGTTATTTTAATATGGTTTACATTTATTGGTGGTATTGGTCTCTACAATTTTTTCAAATATGACATTGGAGTATTAAAAGCTTTTAATCCAAAATATATTGTTGATTACTTCAAACGAAATGGTAAGGAAGGATGGCTATCACTAGGTGGAGTCTTTTTATGCATAACAGGATCTGAGGCCATGTTTGCTGATTTGGGTCACTTTAGTGTACGAGCCATTCAAATTAGCTTTTCTTTTGTTACATTTCCTGCAATATTGATAGCATATATTGGGCAAGCAGCATTTCTAAGAAAGTTTCCTGAAAAAGTGGGGAATACATTCTATGACAGTATACCAGCTAGTCAAGCAATGATTTCAGGAGCATTTTCCATTATATCACAAGCCCTTAGTCTAGGTTGTTTCCCTAGAGTTAAGGTTGTTCATACTTCAACTAAGCATCAAGGTCAAGTTTATATTCCAGAGATCAACTACATGTTCTTGATTGGATGTATAGTAGTATGTGTTGCCTTCAAGACCACAGAAAATATCAGTCATGCCTATGGGATTGCTGTTATTGGTGATATGATGATCTCAACAACACTAGTTTCACTTATAATGCTTGTTATATGGAAGAGGAGTTTATGGATGGTCATCCTTTTCTTTTTTGGATTTGGTAGCATAGAGCTTCTTTATTTCTCAGCTCAAATAACCAAGTTCACAAAAGGAGGATATTTTCCAATTGTACTAGCTACGTTCTTGACAATAATTATGGGAATTTGGCATTATGTTCACAAAGAAAGATACATGTTTGAACTCAAGAACAAAGTTTCTACCGAGTATTTGAAGGAATTGGCGAACAACACAAATGTACACAGAGTGCCTGGAATTGGACTTTTGTATTCCGAGCTTGTACAAGGAATTCCTCCAATATTTCCTCACTTTATAGCTAGTGTACCATCCATTCATTCAGTTGTTGTGTTCGTCTCTATCAAGACAATTCCGGTTAATAGAGTTGCTTTGGAAGAGAGGTTTTTGTTTCGACAAGTGGAACCAAGAGAGTATAGAATATTTCGATGTGTTGCAAGGCGCGGTTACAATGATACGCTTGGGAATCCCGTGGAATTTGAGTCACAATTAATACAAAATCTCAAGGAATTTATTCAACAAGAGAATTTTATGCTTGAGGTTAATGAAGGTGCTGCTACTAATAATGTAACAACTACAACAAGTGAACAATTAGTAGTACCTATTTCCACTAATGAGAGTGATCAAATGGAAGATATATTAGGTAAAGAAGGGAAATCAGGGTCTAATAATTCTTCTAATAGAATAATCCCAAGTAAAGGTGCGTCTCATGTATCATCAGATTCCATTAGATCATTGCCTGCAAGTGTGAGAAAATCATCAAATTTCTATGAACCTATCATTCAAGGACCTGAAGAGGAAATAAAGTTTATAGATAAAGCAACAGAAAAGGGAGTGGTATATATGATAGGTGAAGCAGAGGTAGTAGCTCACCCAAATTCTTCCGTTTTGAACAAGATTGTTGTCAACTATGCTTATAGCTTCTTGCGCAAGAACTTTAGACAGGGAGAAGATTCTATAGCAATCCCACGCAAGAGACTTCTTAAAGTTGGAATGACATATGAAATATGA

Protein sequence

>Msa1206330

MNANHNSKVGWSVTLSLAFQSIGIVYGDIGTSPLYVYASTFTKGIKNNDDILGVLSLIIYTIVLIPMIKYVFIVLWANDNGNGGAFALYSLICRHIKMSLAPNQQPEDMELSNYKLEIPSSQQKRAHKLKQKLENSHFSRIILLLLAIMGTAMVIGDGILTPSISVLSAVSGISTSLGQNAVVGITVAILVVLFCMQRFGTDKVGVTFAPVILIWFTFIGGIGLYNFFKYDIGVLKAFNPKYIVDYFKRNGKEGWLSLGGVFLCITGSEAMFADLGHFSVRAIQISFSFVTFPAILIAYIGQAAFLRKFPEKVGNTFYDSIPASQAMISGAFSIISQALSLGCFPRVKVVHTSTKHQGQVYIPEINYMFLIGCIVVCVAFKTTENISHAYGIAVIGDMMISTTLVSLIMLVIWKRSLWMVILFFFGFGSIELLYFSAQITKFTKGGYFPIVLATFLTIIMGIWHYVHKERYMFELKNKVSTEYLKELANNTNVHRVPGIGLLYSELVQGIPPIFPHFIASVPSIHSVVVFVSIKTIPVNRVALEERFLFRQVEPREYRIFRCVARRGYNDTLGNPVEFESQLIQNLKEFIQQENFMLEVNEGAATNNVTTTTSEQLVVPISTNESDQMEDILGKEGKSGSNNSSNRIIPSKGASHVSSDSIRSLPASVRKSSNFYEPIIQGPEEEIKFIDKATEKGVVYMIGEAEVVAHPNSSVLNKIVVNYAYSFLRKNFRQGEDSIAIPRKRLLKVGMTYEI*