AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0838120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0838120 MtrunA17_Chr5g0405571 98.892 361 4 0 1 361 1 361 0.0 739
Msa0838120 MtrunA17_Chr2g0292421 44.241 382 182 7 3 361 5 378 7.25e-100 300
Msa0838120 MtrunA17_Chr3g0132841 30.357 224 136 12 140 354 470 682 1.89e-15 77.8
Msa0838120 MtrunA17_Chr4g0072351 28.230 209 131 11 140 340 479 676 2.35e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0838120 AT5G66190.1 82.967 364 55 3 1 361 1 360 0.0 590
Msa0838120 AT1G20020.1 75.881 369 81 3 1 361 1 369 0.0 589
Msa0838120 AT1G20020.3 75.610 369 82 3 1 361 1 369 0.0 587
Msa0838120 AT1G20020.2 87.059 255 33 0 107 361 1 255 6.14e-174 484
Msa0838120 AT5G66190.2 89.370 254 27 0 108 361 9 262 2.38e-166 465
Msa0838120 AT4G05390.1 46.505 329 168 4 40 361 51 378 6.35e-100 301
Msa0838120 AT4G05390.2 50.853 293 136 4 76 361 59 350 1.02e-99 299
Msa0838120 AT1G30510.2 43.832 381 190 7 2 361 5 382 1.21e-99 300
Msa0838120 AT1G30510.1 43.583 374 196 5 2 361 9 381 1.46e-99 300
Msa0838120 AT1G30510.3 48.101 316 156 4 53 361 3 317 3.56e-99 296
Msa0838120 AT4G24520.1 28.571 224 140 12 140 354 470 682 7.19e-15 76.3
Msa0838120 AT4G24520.2 28.571 224 140 12 140 354 466 678 7.37e-15 76.3

Find 123 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTACAACCCTTGTAATTT+TGG 0.126679 5_4:+12454389 Msa0838120:three_prime_UTR
AGCAGTGCTCTTGGTGATTT+TGG 0.159118 5_4:+12452374 Msa0838120:CDS
TGCAGCAGCCATGTTGTTAT+TGG 0.219869 5_4:-12451237 None:intergenic
TCTAGGGACGAGTAAGTTTA+TGG 0.224669 5_4:-12454735 None:intergenic
TGGTTTGGCATGGCTCTTCT+TGG 0.262373 5_4:+12453648 Msa0838120:CDS
TTGAATAATGTTTCCATTAG+TGG 0.264637 5_4:+12451558 Msa0838120:CDS
CAAAACCCCTTAGGCTAAAA+TGG 0.269657 5_4:+12451007 Msa0838120:five_prime_UTR
CTTCCAATGTATGGTGTCTT+TGG 0.276021 5_4:-12451687 None:intergenic
TTCTGCGTATTGTGCCATTC+TGG 0.290367 5_4:-12453910 None:intergenic
GAATATTCACAATCAAATTC+AGG 0.297816 5_4:-12454519 None:intergenic
AGAGAAGTGGAGTTGGAGTA+TGG 0.297934 5_4:-12451281 None:intergenic
TTAATAAAGACTCACAGTTT+TGG 0.301523 5_4:-12452402 None:intergenic
CTCTAACTCGGACCAAAGTT+TGG 0.313854 5_4:+12454700 Msa0838120:three_prime_UTR
GACTGTTAACCTTCCACTAA+TGG 0.338400 5_4:-12451571 None:intergenic
CTGCAGTTGGGAACTGGTAC+TGG 0.341094 5_4:+12453279 Msa0838120:intron
AAGCAGCTCACTGCTTTATA+AGG 0.342576 5_4:+12453681 Msa0838120:CDS
AGAAAGCACCTGAGAACTTC+AGG 0.359267 5_4:+12453826 Msa0838120:CDS
TATTCAGGCGACTTGAAGCC+TGG 0.381421 5_4:+12453069 Msa0838120:intron
ATATTTGTAGTTCAATGGTT+TGG 0.384817 5_4:+12453633 Msa0838120:intron
AGAAAAGATATCAAAGAAAC+AGG 0.385941 5_4:+12451635 Msa0838120:CDS
AGATAGACTTGTCTTCAAAA+AGG 0.389421 5_4:+12451331 Msa0838120:CDS
CATAATATCGACCACTTCTC+TGG 0.390696 5_4:+12451079 Msa0838120:five_prime_UTR
GGATCTGAAGTACAGATTAC+TGG 0.391458 5_4:+12453090 Msa0838120:CDS
TACAGAGAAGGACAATCAAT+TGG 0.392978 5_4:+12452287 Msa0838120:CDS
CGTATTGTGCCATTCTGGTT+TGG 0.393872 5_4:-12453905 None:intergenic
ACGGTGGCATTAGGATCTTT+TGG 0.394188 5_4:-12453138 None:intergenic
CCATTCTTGTCAATACCATC+TGG 0.394699 5_4:-12452317 None:intergenic
ATAAGCATTTCTTTACCAAC+TGG 0.399545 5_4:-12453114 None:intergenic
TACTAGGGATGAGGCAGATT+GGG 0.405130 5_4:+12454662 Msa0838120:three_prime_UTR
GGTTTGGCATGGCTCTTCTT+GGG 0.411064 5_4:+12453649 Msa0838120:CDS
TTAAATATGCTATTAGTACT+AGG 0.413869 5_4:+12454646 Msa0838120:three_prime_UTR
GAAGGGAATTGATGACATAA+TGG 0.416372 5_4:+12453998 Msa0838120:CDS
ATATGATATTTGTAGTTCAA+TGG 0.421657 5_4:+12453628 Msa0838120:intron
TATGTGTTGTAGGTATTGAT+TGG 0.421809 5_4:+12454229 Msa0838120:intron
ATTGATTGTCCTTCTCTGTA+AGG 0.428154 5_4:-12452284 None:intergenic
CATTTACAGTACTTGGGTCT+AGG 0.438371 5_4:-12454752 None:intergenic
ATTTGCATCAATCCAAACTT+TGG 0.438450 5_4:-12454712 None:intergenic
AGAAGCACCTGCTCCTGTTA+AGG 0.442455 5_4:+12451611 Msa0838120:CDS
TGATGCCGGAGAAGTTGTTA+AGG 0.448771 5_4:+12452721 Msa0838120:CDS
ATTCAGGAAATTGATCAAGT+TGG 0.458323 5_4:-12454503 None:intergenic
ACCATGATGACGGTGGCATT+AGG 0.466209 5_4:-12453147 None:intergenic
CTTCAACTGTCTCTTGTACT+CGG 0.468568 5_4:-12454253 None:intergenic
TAAAGCAGTGAGCTGCTTGT+GGG 0.469081 5_4:-12453676 None:intergenic
CGAGAAGCATGAAGATTACA+AGG 0.497025 5_4:+12453341 Msa0838120:CDS
AGAAGACACCTTCCAATGTA+TGG 0.498391 5_4:-12451696 None:intergenic
CACAATACGCAGAAGAGTTG+TGG 0.498754 5_4:+12453919 Msa0838120:CDS
AAGTCAAGCCTGAAGTTCTC+AGG 0.498853 5_4:-12453834 None:intergenic
ATACTCATGCATGAGCCATC+AGG 0.500554 5_4:+12454605 Msa0838120:three_prime_UTR
ACTCCACTTCTCTTCCGATC+AGG 0.500775 5_4:+12451291 Msa0838120:CDS
TCAATTGCTAGCAGTGCTCT+TGG 0.502382 5_4:+12452365 Msa0838120:CDS
TGTAGTTCAATGGTTTGGCA+TGG 0.502735 5_4:+12453638 Msa0838120:intron
GTTTCACTCGCTGCCAAAGA+AGG 0.504760 5_4:+12454020 Msa0838120:CDS
GTAATCTATCTACAGAATAC+AGG 0.506663 5_4:-12454372 None:intergenic
ACAATACGCAGAAGAGTTGT+GGG 0.513315 5_4:+12453920 Msa0838120:CDS
ATTTACAGTACTTGGGTCTA+GGG 0.518474 5_4:-12454751 None:intergenic
ACAGGAATTTGAAAAGATGA+AGG 0.521111 5_4:+12453803 Msa0838120:intron
GTACTAGGGATGAGGCAGAT+TGG 0.521890 5_4:+12454661 Msa0838120:three_prime_UTR
ATGATGCACCTGGTGAAACT+TGG 0.522730 5_4:+12451739 Msa0838120:CDS
AGTGGAGTTGGAGTATGGAA+AGG 0.528772 5_4:-12451276 None:intergenic
ACAGAGAAGGACAATCAATT+GGG 0.529867 5_4:+12452288 Msa0838120:CDS
GTAATCTGTACTTCAGATCC+AGG 0.530710 5_4:-12453087 None:intergenic
TCTTGTGACCAAAACCCCTT+AGG 0.532902 5_4:+12450998 Msa0838120:five_prime_UTR
CCAGATGGTATTGACAAGAA+TGG 0.533775 5_4:+12452317 Msa0838120:CDS
TGCTATTAGTACTAGGGATG+AGG 0.538545 5_4:+12454653 Msa0838120:three_prime_UTR
TCCTAATGCCACCGTCATCA+TGG 0.538982 5_4:+12453146 Msa0838120:CDS
GATGCCGGAGAAGTTGTTAA+GGG 0.540363 5_4:+12452722 Msa0838120:CDS
TGAGCCATCAGGTTACGAGC+AGG 0.541235 5_4:+12454616 Msa0838120:three_prime_UTR
GACTCCCTTAACAACTTCTC+CGG 0.542086 5_4:-12452726 None:intergenic
AATAATATTGTTCACAAGCA+AGG 0.542192 5_4:-12454429 None:intergenic
TAAATATGCTATTAGTACTA+GGG 0.543318 5_4:+12454647 Msa0838120:three_prime_UTR
GATCGGAAGAGAAGTGGAGT+TGG 0.545018 5_4:-12451288 None:intergenic
TTGGTCCGAGTTAGAGACAC+TGG 0.549592 5_4:-12454693 None:intergenic
TGAGATATGGCCTGAAAATG+AGG 0.549695 5_4:+12454579 Msa0838120:three_prime_UTR
CACCCCTGCTCGTAACCTGA+TGG 0.550504 5_4:-12454620 None:intergenic
TTCACCAGGTGCATCATCAC+CGG 0.556250 5_4:-12451733 None:intergenic
AGTTGAAGAAGGCAGAGCAA+TGG 0.557197 5_4:+12454268 Msa0838120:CDS
GGAGAGGTTCCTTACAGAGA+AGG 0.558827 5_4:+12452275 Msa0838120:intron
TAGGCTAAAATGGTCATCAC+AGG 0.561974 5_4:+12451017 Msa0838120:five_prime_UTR
TGTCCTGATCGGAAGAGAAG+TGG 0.571586 5_4:-12451294 None:intergenic
AGCCATCAGGTTACGAGCAG+GGG 0.572220 5_4:+12454618 Msa0838120:three_prime_UTR
ATAAAGCAGTGAGCTGCTTG+TGG 0.572307 5_4:-12453677 None:intergenic
GTACAAGAGACAGTTGAAGA+AGG 0.576995 5_4:+12454257 Msa0838120:CDS
ATTATTTATCTGAGGTCATG+AGG 0.576996 5_4:-12450968 None:intergenic
AATGTACATCCAAACCAGAA+TGG 0.582961 5_4:+12453896 Msa0838120:CDS
TAAGCATTTCTTTACCAACT+GGG 0.583707 5_4:-12453113 None:intergenic
GGACTGAAAGGAATGGAGAA+GGG 0.584337 5_4:+12453981 Msa0838120:CDS
GAATATGCTGCTGCACAAAG+TGG 0.585462 5_4:-12454338 None:intergenic
GAGCCATCAGGTTACGAGCA+GGG 0.586355 5_4:+12454617 Msa0838120:three_prime_UTR
ATAATGTTTCCATTAGTGGA+AGG 0.586548 5_4:+12451562 Msa0838120:CDS
CAAAGACACCATACATTGGA+AGG 0.589657 5_4:+12451688 Msa0838120:CDS
AGGTGCTTCTGTAGCAACTT+CGG 0.589953 5_4:-12451598 None:intergenic
TGGACTGAAAGGAATGGAGA+AGG 0.593496 5_4:+12453980 Msa0838120:CDS
AAACCAAAGACACCATACAT+TGG 0.596092 5_4:+12451684 Msa0838120:CDS
GTACAGATTACTGGCCCAGT+TGG 0.601436 5_4:+12453099 Msa0838120:CDS
TTTGTCATACCAAAATTACA+AGG 0.602419 5_4:-12454398 None:intergenic
AATTCCCAGTGTCTCTAACT+CGG 0.603971 5_4:+12454688 Msa0838120:three_prime_UTR
TTTGAAGACAAGTCTATCTG+GGG 0.606529 5_4:-12451327 None:intergenic
CAGCTCACTGCTTTATAAGG+AGG 0.608066 5_4:+12453684 Msa0838120:CDS
TGATTCTTCCAATAACAACA+TGG 0.609733 5_4:+12451229 Msa0838120:exon
ATGTCTAGATTATTTATCTG+AGG 0.610944 5_4:-12450976 None:intergenic
GTTTACATGTGTGGACTGAA+AGG 0.611115 5_4:+12453969 Msa0838120:CDS
ACCATGTGCCAAGTTTCACC+AGG 0.614512 5_4:-12451747 None:intergenic
CTTGTGTACACAAATGATGC+CGG 0.615312 5_4:+12452707 Msa0838120:CDS
TTGTCATACCAAAATTACAA+GGG 0.619687 5_4:-12454397 None:intergenic
AAAGCAGTGAGCTGCTTGTG+GGG 0.619800 5_4:-12453675 None:intergenic
AAATTTGTGAGCCAGAGAAG+TGG 0.620867 5_4:-12451090 None:intergenic
GAATACAATCTCAGCTTGTG+AGG 0.622294 5_4:-12452344 None:intergenic
AGAGAACAAGTAAACGACAA+AGG 0.624485 5_4:+12453867 Msa0838120:CDS
TCAAAGATATTATGATTGAG+TGG 0.626581 5_4:-12451116 None:intergenic
GAAATAACAGATGTCCTGAT+CGG 0.627473 5_4:-12451305 None:intergenic
CTTCTCAACACAAAGATCAC+CGG 0.628852 5_4:+12451714 Msa0838120:CDS
ATATCAAAGAAACAGGAGGA+AGG 0.640788 5_4:+12451642 Msa0838120:CDS
GTTGGAGTATGGAAAGGAGA+CGG 0.641171 5_4:-12451270 None:intergenic
AAAGATATCAAAGAAACAGG+AGG 0.651290 5_4:+12451638 Msa0838120:CDS
TGGTCCGAGTTAGAGACACT+GGG 0.656928 5_4:-12454692 None:intergenic
ACCTGGTGAAACTTGGCACA+TGG 0.659148 5_4:+12451746 Msa0838120:CDS
TCAATTGGGATAGTTCCAGA+TGG 0.670503 5_4:+12452302 Msa0838120:CDS
GAAGTGGTCGATATTATGTG+AGG 0.693308 5_4:-12451074 None:intergenic
CATGTGTGGACTGAAAGGAA+TGG 0.694748 5_4:+12453974 Msa0838120:CDS
TAAGTAATGTACCATGATGA+CGG 0.701831 5_4:-12453157 None:intergenic
ATCACCGGTGATGATGCACC+TGG 0.734264 5_4:+12451729 Msa0838120:CDS
GGAGTATGGAAAGGAGACGG+CGG 0.734819 5_4:-12451267 None:intergenic
GTAATGTACCATGATGACGG+TGG 0.793247 5_4:-12453154 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATTATAATACAAATATT+AGG - chr5_4:12452254-12452273 None:intergenic 10.0%
!! AATATTTGTATTATAATTTC+AGG + chr5_4:12452254-12452273 Msa0838120:intron 10.0%
!!! TTTATAGATCTTTTAAAGAA+TGG + chr5_4:12453473-12453492 Msa0838120:intron 15.0%
!! ATTATTATGAGTATGATATG+AGG + chr5_4:12451512-12451531 Msa0838120:intron 20.0%
!! ATGTAAAAGTAATAATAGAG+AGG - chr5_4:12451807-12451826 None:intergenic 20.0%
!!! CATTACAAGGTTTTAAATTA+CGG + chr5_4:12451835-12451854 Msa0838120:intron 20.0%
!!! TTATCATATACTTGTTTTGA+GGG - chr5_4:12452604-12452623 None:intergenic 20.0%
!!! TTTGATTATTAACTGAGTTT+TGG + chr5_4:12453594-12453613 Msa0838120:intron 20.0%
!! ATATGATATTTGTAGTTCAA+TGG + chr5_4:12453628-12453647 Msa0838120:intron 20.0%
!! TTAAATATGCTATTAGTACT+AGG + chr5_4:12454646-12454665 Msa0838120:three_prime_UTR 20.0%
!! TAAATATGCTATTAGTACTA+GGG + chr5_4:12454647-12454666 Msa0838120:three_prime_UTR 20.0%
! ATGTCTAGATTATTTATCTG+AGG - chr5_4:12450979-12450998 None:intergenic 25.0%
! TCAAAGATATTATGATTGAG+TGG - chr5_4:12451119-12451138 None:intergenic 25.0%
! TCAATGCATGTATATGATTA+TGG - chr5_4:12451371-12451390 None:intergenic 25.0%
! TTGAATAATGTTTCCATTAG+TGG + chr5_4:12451558-12451577 Msa0838120:CDS 25.0%
! AGAAAAGATATCAAAGAAAC+AGG + chr5_4:12451635-12451654 Msa0838120:CDS 25.0%
! TACATTCACTATTCATTACA+AGG + chr5_4:12451822-12451841 Msa0838120:intron 25.0%
! AATAGAAATTCCGATTCTAA+AGG + chr5_4:12451877-12451896 Msa0838120:intron 25.0%
! TAGTATTATGCATTGGATTA+GGG + chr5_4:12451957-12451976 Msa0838120:intron 25.0%
! ATTTCCCAAAATTTGTGTTA+GGG + chr5_4:12452136-12452155 Msa0838120:intron 25.0%
!!! AGATTGTGGTTTTAGAAAAA+TGG - chr5_4:12452176-12452195 None:intergenic 25.0%
!! ATGTTATGATTTCTAGATTG+TGG - chr5_4:12452190-12452209 None:intergenic 25.0%
! ACAATCTAGAAATCATAACA+TGG + chr5_4:12452189-12452208 Msa0838120:intron 25.0%
! TTGTATTATAATTTCAGGAG+AGG + chr5_4:12452259-12452278 Msa0838120:intron 25.0%
!! TTAATAAAGACTCACAGTTT+TGG - chr5_4:12452405-12452424 None:intergenic 25.0%
! ACTGTGAGTCTTTATTAATT+TGG + chr5_4:12452407-12452426 Msa0838120:intron 25.0%
!! AAAGTTCGAATTTTGTAACA+GGG - chr5_4:12452541-12452560 None:intergenic 25.0%
!! AAAAGTTCGAATTTTGTAAC+AGG - chr5_4:12452542-12452561 None:intergenic 25.0%
!!! CTTATCATATACTTGTTTTG+AGG - chr5_4:12452605-12452624 None:intergenic 25.0%
!!! GAGAAAATTTTAAGGATCAA+CGG - chr5_4:12453260-12453279 None:intergenic 25.0%
!! TTAAAATTTTCTCTGCAGTT+GGG + chr5_4:12453267-12453286 Msa0838120:intron 25.0%
!! ACATTTTCCATAAAAATGAG+CGG - chr5_4:12453317-12453336 None:intergenic 25.0%
! ATATTTGTAGTTCAATGGTT+TGG + chr5_4:12453633-12453652 Msa0838120:intron 25.0%
! CTACTTTAATTGTATGATAC+AGG + chr5_4:12453785-12453804 Msa0838120:intron 25.0%
!! AATGTTTTTCTTACCTTCTT+TGG - chr5_4:12454036-12454055 None:intergenic 25.0%
!! TTTTATTACATGAAGCATAG+AGG + chr5_4:12454062-12454081 Msa0838120:intron 25.0%
! TTTATTACATGAAGCATAGA+GGG + chr5_4:12454063-12454082 Msa0838120:intron 25.0%
! TTGTCATACCAAAATTACAA+GGG - chr5_4:12454400-12454419 None:intergenic 25.0%
! TTTGTCATACCAAAATTACA+AGG - chr5_4:12454401-12454420 None:intergenic 25.0%
! AATAATATTGTTCACAAGCA+AGG - chr5_4:12454432-12454451 None:intergenic 25.0%
!! TGTTGCAAGAAATAATTTTG+AGG + chr5_4:12454460-12454479 Msa0838120:three_prime_UTR 25.0%
! GAATATTCACAATCAAATTC+AGG - chr5_4:12454522-12454541 None:intergenic 25.0%
!! GTCTAATTTTAGATGAGATA+TGG + chr5_4:12454566-12454585 Msa0838120:three_prime_UTR 25.0%
! ATTATTTATCTGAGGTCATG+AGG - chr5_4:12450971-12450990 None:intergenic 30.0%
!!! TGTTTGAGTTTTTTTCTGGT+TGG - chr5_4:12451143-12451162 None:intergenic 30.0%
TGATTCTTCCAATAACAACA+TGG + chr5_4:12451229-12451248 Msa0838120:exon 30.0%
!! TTTTGAAGACAAGTCTATCT+GGG - chr5_4:12451331-12451350 None:intergenic 30.0%
!! TTTTTGAAGACAAGTCTATC+TGG - chr5_4:12451332-12451351 None:intergenic 30.0%
AGATAGACTTGTCTTCAAAA+AGG + chr5_4:12451331-12451350 Msa0838120:CDS 30.0%
ATAATGTTTCCATTAGTGGA+AGG + chr5_4:12451562-12451581 Msa0838120:CDS 30.0%
! GATATCTTTTCTACCTTAAC+AGG - chr5_4:12451627-12451646 None:intergenic 30.0%
AAAGATATCAAAGAAACAGG+AGG + chr5_4:12451638-12451657 Msa0838120:CDS 30.0%
!! TTATCAGACTCCTTTAGAAT+CGG - chr5_4:12451890-12451909 None:intergenic 30.0%
CTTTGTCTAGTATTATGCAT+TGG + chr5_4:12451950-12451969 Msa0838120:intron 30.0%
CTAGTATTATGCATTGGATT+AGG + chr5_4:12451956-12451975 Msa0838120:intron 30.0%
!! CTAACACAAATTTTGGGAAA+TGG - chr5_4:12452137-12452156 None:intergenic 30.0%
CATTTCCCAAAATTTGTGTT+AGG + chr5_4:12452135-12452154 Msa0838120:intron 30.0%
! CATTCCCTAACACAAATTTT+GGG - chr5_4:12452143-12452162 None:intergenic 30.0%
! ACATTCCCTAACACAAATTT+TGG - chr5_4:12452144-12452163 None:intergenic 30.0%
AAAATTTGTGTTAGGGAATG+TGG + chr5_4:12452143-12452162 Msa0838120:intron 30.0%
! AAGTTCGAATTTTGTAACAG+GGG - chr5_4:12452540-12452559 None:intergenic 30.0%
TGCTGCTCTTAAATTCATTT+GGG - chr5_4:12452581-12452600 None:intergenic 30.0%
CTGATATGATTCCTTTATAC+AGG + chr5_4:12452664-12452683 Msa0838120:intron 30.0%
! AAGGATGAATGCTTTTACTT+TGG + chr5_4:12452767-12452786 Msa0838120:intron 30.0%
GTCAATGTTCTAATCAATTG+AGG + chr5_4:12452852-12452871 Msa0838120:intron 30.0%
ATAGTAAAGTCTCCACATTA+GGG - chr5_4:12452893-12452912 None:intergenic 30.0%
TATAGTAAAGTCTCCACATT+AGG - chr5_4:12452894-12452913 None:intergenic 30.0%
ACAGTGGTGATTAGTATAAA+GGG - chr5_4:12453040-12453059 None:intergenic 30.0%
TAAGCATTTCTTTACCAACT+GGG - chr5_4:12453116-12453135 None:intergenic 30.0%
ATAAGCATTTCTTTACCAAC+TGG - chr5_4:12453117-12453136 None:intergenic 30.0%
TAAGTAATGTACCATGATGA+CGG - chr5_4:12453160-12453179 None:intergenic 30.0%
! CTTTTCGATATAGATGAAGA+TGG - chr5_4:12453184-12453203 None:intergenic 30.0%
AACAGTCAAGACAAAAGAAA+GGG - chr5_4:12453229-12453248 None:intergenic 30.0%
! CAACTGCAGAGAAAATTTTA+AGG - chr5_4:12453268-12453287 None:intergenic 30.0%
! CTTAAAATTTTCTCTGCAGT+TGG + chr5_4:12453266-12453285 Msa0838120:intron 30.0%
GTAGTTGCAATAAATTAGAG+TGG - chr5_4:12453438-12453457 None:intergenic 30.0%
!!! TTAACTGAGTTTTGGACTTT+TGG + chr5_4:12453602-12453621 Msa0838120:intron 30.0%
TGCTACAAGTTATGTAGAAT+GGG + chr5_4:12453745-12453764 Msa0838120:intron 30.0%
ACAGGAATTTGAAAAGATGA+AGG + chr5_4:12453803-12453822 Msa0838120:intron 30.0%
!! AACACTTTTGTTTACATGTG+TGG + chr5_4:12453960-12453979 Msa0838120:CDS 30.0%
TTATTACATGAAGCATAGAG+GGG + chr5_4:12454064-12454083 Msa0838120:intron 30.0%
TGAAATTCAAACCATGATGA+AGG + chr5_4:12454130-12454149 Msa0838120:intron 30.0%
! TAGTATTTTCTCCTTCATCA+TGG - chr5_4:12454144-12454163 None:intergenic 30.0%
AACACATAACAAACACAACA+TGG - chr5_4:12454217-12454236 None:intergenic 30.0%
!! TTGTGTTTGTTATGTGTTGT+AGG + chr5_4:12454219-12454238 Msa0838120:intron 30.0%
!! TATGTGTTGTAGGTATTGAT+TGG + chr5_4:12454229-12454248 Msa0838120:intron 30.0%
GTAATCTATCTACAGAATAC+AGG - chr5_4:12454375-12454394 None:intergenic 30.0%
! GATTACAACCCTTGTAATTT+TGG + chr5_4:12454389-12454408 Msa0838120:three_prime_UTR 30.0%
ATTCAGGAAATTGATCAAGT+TGG - chr5_4:12454506-12454525 None:intergenic 30.0%
ATTTGCATCAATCCAAACTT+TGG - chr5_4:12454715-12454734 None:intergenic 30.0%
!! TGATGACCATTTTAGCCTAA+GGG - chr5_4:12451016-12451035 None:intergenic 35.0%
!!! GCAGTGTTTGAGTTTTTTTC+TGG - chr5_4:12451147-12451166 None:intergenic 35.0%
GAAATAACAGATGTCCTGAT+CGG - chr5_4:12451308-12451327 None:intergenic 35.0%
TTTGAAGACAAGTCTATCTG+GGG - chr5_4:12451330-12451349 None:intergenic 35.0%
! TATACATGCATTGATCCAAC+CGG + chr5_4:12451377-12451396 Msa0838120:intron 35.0%
TAAATTATCAGTGTCGTGTC+CGG - chr5_4:12451399-12451418 None:intergenic 35.0%
ATATCAAAGAAACAGGAGGA+AGG + chr5_4:12451642-12451661 Msa0838120:CDS 35.0%
AAACCAAAGACACCATACAT+TGG + chr5_4:12451684-12451703 Msa0838120:CDS 35.0%
AGATGATGTAACTTCAATCG+CGG + chr5_4:12452110-12452129 Msa0838120:intron 35.0%
ATTGATTGTCCTTCTCTGTA+AGG - chr5_4:12452287-12452306 None:intergenic 35.0%
TACAGAGAAGGACAATCAAT+TGG + chr5_4:12452287-12452306 Msa0838120:CDS 35.0%
ACAGAGAAGGACAATCAATT+GGG + chr5_4:12452288-12452307 Msa0838120:CDS 35.0%
TTTCTGTACTGTATTGTAGC+TGG + chr5_4:12452446-12452465 Msa0838120:intron 35.0%
TTCTGTACTGTATTGTAGCT+GGG + chr5_4:12452447-12452466 Msa0838120:intron 35.0%
! AATTTTGTAACAGGGGTCAA+TGG - chr5_4:12452533-12452552 None:intergenic 35.0%
! GTGCTGCTCTTAAATTCATT+TGG - chr5_4:12452582-12452601 None:intergenic 35.0%
! TTGCCAACACATCTTTTGTA+TGG + chr5_4:12452625-12452644 Msa0838120:intron 35.0%
! TGCCAACACATCTTTTGTAT+GGG + chr5_4:12452626-12452645 Msa0838120:intron 35.0%
TACCCATACAAAAGATGTGT+TGG - chr5_4:12452631-12452650 None:intergenic 35.0%
ACAGAGAGAAACCTGTATAA+AGG - chr5_4:12452678-12452697 None:intergenic 35.0%
CTGCTCTAATTTCTTGTGTA+AGG + chr5_4:12452748-12452767 Msa0838120:intron 35.0%
TTAGAGTCCTCAAATGCAAA+TGG - chr5_4:12452798-12452817 None:intergenic 35.0%
CAGTGGTGATTAGTATAAAG+GGG - chr5_4:12453039-12453058 None:intergenic 35.0%
CACAGTGGTGATTAGTATAA+AGG - chr5_4:12453041-12453060 None:intergenic 35.0%
CAACAGTCAAGACAAAAGAA+AGG - chr5_4:12453230-12453249 None:intergenic 35.0%
TCCATAAAAATGAGCGGAAT+GGG - chr5_4:12453311-12453330 None:intergenic 35.0%
TTCCATAAAAATGAGCGGAA+TGG - chr5_4:12453312-12453331 None:intergenic 35.0%
TACAAGGTAAGAGAAGAACT+TGG + chr5_4:12453357-12453376 Msa0838120:intron 35.0%
AAGAGAAGAACTTGGAACAA+AGG + chr5_4:12453365-12453384 Msa0838120:intron 35.0%
GCAATAAATTAGAGTGGCAA+CGG - chr5_4:12453432-12453451 None:intergenic 35.0%
TTACTTTGCTTGTGCTTACT+AGG - chr5_4:12453511-12453530 None:intergenic 35.0%
CTGCTACAAGTTATGTAGAA+TGG + chr5_4:12453744-12453763 Msa0838120:intron 35.0%
AGAGAACAAGTAAACGACAA+AGG + chr5_4:12453867-12453886 Msa0838120:CDS 35.0%
AATGTACATCCAAACCAGAA+TGG + chr5_4:12453896-12453915 Msa0838120:CDS 35.0%
! GAAGGGAATTGATGACATAA+TGG + chr5_4:12453998-12454017 Msa0838120:CDS 35.0%
TATTACATGAAGCATAGAGG+GGG + chr5_4:12454065-12454084 Msa0838120:intron 35.0%
! TGAGTATGATCCTCATTTTC+AGG - chr5_4:12454592-12454611 None:intergenic 35.0%
!! CATTTTAGCCTAAGGGGTTT+TGG - chr5_4:12451009-12451028 None:intergenic 40.0%
CAAAACCCCTTAGGCTAAAA+TGG + chr5_4:12451007-12451026 Msa0838120:five_prime_UTR 40.0%
!! GATGACCATTTTAGCCTAAG+GGG - chr5_4:12451015-12451034 None:intergenic 40.0%
!! GTGATGACCATTTTAGCCTA+AGG - chr5_4:12451017-12451036 None:intergenic 40.0%
TAGGCTAAAATGGTCATCAC+AGG + chr5_4:12451017-12451036 Msa0838120:five_prime_UTR 40.0%
GAAGTGGTCGATATTATGTG+AGG - chr5_4:12451077-12451096 None:intergenic 40.0%
CATAATATCGACCACTTCTC+TGG + chr5_4:12451079-12451098 Msa0838120:five_prime_UTR 40.0%
AAATTTGTGAGCCAGAGAAG+TGG - chr5_4:12451093-12451112 None:intergenic 40.0%
ACACTTACACTTCAGATCGA+AGG - chr5_4:12451485-12451504 None:intergenic 40.0%
TGAGGTGATGTTTGTTTGTC+AGG + chr5_4:12451530-12451549 Msa0838120:intron 40.0%
GACTGTTAACCTTCCACTAA+TGG - chr5_4:12451574-12451593 None:intergenic 40.0%
! TTTTCTACCTTAACAGGAGC+AGG - chr5_4:12451621-12451640 None:intergenic 40.0%
CTTCCAATGTATGGTGTCTT+TGG - chr5_4:12451690-12451709 None:intergenic 40.0%
CAAAGACACCATACATTGGA+AGG + chr5_4:12451688-12451707 Msa0838120:CDS 40.0%
AGAAGACACCTTCCAATGTA+TGG - chr5_4:12451699-12451718 None:intergenic 40.0%
CTTCTCAACACAAAGATCAC+CGG + chr5_4:12451714-12451733 Msa0838120:CDS 40.0%
TCAATTGGGATAGTTCCAGA+TGG + chr5_4:12452302-12452321 Msa0838120:CDS 40.0%
CCATTCTTGTCAATACCATC+TGG - chr5_4:12452320-12452339 None:intergenic 40.0%
!! CCAGATGGTATTGACAAGAA+TGG + chr5_4:12452317-12452336 Msa0838120:CDS 40.0%
GAATACAATCTCAGCTTGTG+AGG - chr5_4:12452347-12452366 None:intergenic 40.0%
CTTGTGTACACAAATGATGC+CGG + chr5_4:12452707-12452726 Msa0838120:CDS 40.0%
GGCATTTCCATTTGCATTTG+AGG + chr5_4:12452788-12452807 Msa0838120:intron 40.0%
TAAAGTCTCCACATTAGGGA+GGG - chr5_4:12452889-12452908 None:intergenic 40.0%
CTGAATAAAGAGGATCACAG+TGG - chr5_4:12453056-12453075 None:intergenic 40.0%
CACTGTGATCCTCTTTATTC+AGG + chr5_4:12453054-12453073 Msa0838120:intron 40.0%
TTCAAGTCGCCTGAATAAAG+AGG - chr5_4:12453066-12453085 None:intergenic 40.0%
GTAATCTGTACTTCAGATCC+AGG - chr5_4:12453090-12453109 None:intergenic 40.0%
! GGATCTGAAGTACAGATTAC+TGG + chr5_4:12453090-12453109 Msa0838120:CDS 40.0%
CCATAAAAATGAGCGGAATG+GGG - chr5_4:12453310-12453329 None:intergenic 40.0%
! CGAGAAGCATGAAGATTACA+AGG + chr5_4:12453341-12453360 Msa0838120:CDS 40.0%
TTCTGGTAACATCGATCACT+TGG - chr5_4:12453400-12453419 None:intergenic 40.0%
! TGTAGTTCAATGGTTTGGCA+TGG + chr5_4:12453638-12453657 Msa0838120:intron 40.0%
AAGCAGCTCACTGCTTTATA+AGG + chr5_4:12453681-12453700 Msa0838120:CDS 40.0%
ACAATACGCAGAAGAGTTGT+GGG + chr5_4:12453920-12453939 Msa0838120:CDS 40.0%
! GTTTACATGTGTGGACTGAA+AGG + chr5_4:12453969-12453988 Msa0838120:CDS 40.0%
ATTACATGAAGCATAGAGGG+GGG + chr5_4:12454066-12454085 Msa0838120:intron 40.0%
GGTTTGAGCTAATGGTTAGA+AGG + chr5_4:12454105-12454124 Msa0838120:intron 40.0%
CTTCAACTGTCTCTTGTACT+CGG - chr5_4:12454256-12454275 None:intergenic 40.0%
GTACAAGAGACAGTTGAAGA+AGG + chr5_4:12454257-12454276 Msa0838120:CDS 40.0%
TGAGATATGGCCTGAAAATG+AGG + chr5_4:12454579-12454598 Msa0838120:three_prime_UTR 40.0%
TGCTATTAGTACTAGGGATG+AGG + chr5_4:12454653-12454672 Msa0838120:three_prime_UTR 40.0%
AATTCCCAGTGTCTCTAACT+CGG + chr5_4:12454688-12454707 Msa0838120:three_prime_UTR 40.0%
TCTAGGGACGAGTAAGTTTA+TGG - chr5_4:12454738-12454757 None:intergenic 40.0%
TCTTGTGACCAAAACCCCTT+AGG + chr5_4:12450998-12451017 Msa0838120:five_prime_UTR 45.0%
TGCAGCAGCCATGTTGTTAT+TGG - chr5_4:12451240-12451259 None:intergenic 45.0%
GTTGGAGTATGGAAAGGAGA+CGG - chr5_4:12451273-12451292 None:intergenic 45.0%
AGTGGAGTTGGAGTATGGAA+AGG - chr5_4:12451279-12451298 None:intergenic 45.0%
AGAGAAGTGGAGTTGGAGTA+TGG - chr5_4:12451284-12451303 None:intergenic 45.0%
TTAGTGACAGACACTGACAC+CGG + chr5_4:12451454-12451473 Msa0838120:intron 45.0%
AGGTGCTTCTGTAGCAACTT+CGG - chr5_4:12451601-12451620 None:intergenic 45.0%
ATGATGCACCTGGTGAAACT+TGG + chr5_4:12451739-12451758 Msa0838120:CDS 45.0%
!! CACATGGTTTTCAGCACTGA+GGG + chr5_4:12451762-12451781 Msa0838120:CDS 45.0%
GACTCATATTCGCTAGCAAG+TGG - chr5_4:12452046-12452065 None:intergenic 45.0%
TCAATTGCTAGCAGTGCTCT+TGG + chr5_4:12452365-12452384 Msa0838120:CDS 45.0%
!! AGCAGTGCTCTTGGTGATTT+TGG + chr5_4:12452374-12452393 Msa0838120:CDS 45.0%
TGATGCCGGAGAAGTTGTTA+AGG + chr5_4:12452721-12452740 Msa0838120:CDS 45.0%
GATGCCGGAGAAGTTGTTAA+GGG + chr5_4:12452722-12452741 Msa0838120:CDS 45.0%
GACTCCCTTAACAACTTCTC+CGG - chr5_4:12452729-12452748 None:intergenic 45.0%
TTCTTTCTCCCTCCCTAATG+TGG + chr5_4:12452878-12452897 Msa0838120:intron 45.0%
GTAAAGTCTCCACATTAGGG+AGG - chr5_4:12452890-12452909 None:intergenic 45.0%
! ACGGTGGCATTAGGATCTTT+TGG - chr5_4:12453141-12453160 None:intergenic 45.0%
!! GTAATGTACCATGATGACGG+TGG - chr5_4:12453157-12453176 None:intergenic 45.0%
! TTTTCTCTGCAGTTGGGAAC+TGG + chr5_4:12453273-12453292 Msa0838120:intron 45.0%
!! CCCCATTCCGCTCATTTTTA+TGG + chr5_4:12453307-12453326 Msa0838120:CDS 45.0%
AATTAGAGTGGCAACGGTTG+TGG - chr5_4:12453426-12453445 None:intergenic 45.0%
TAAAGCAGTGAGCTGCTTGT+GGG - chr5_4:12453679-12453698 None:intergenic 45.0%
ATAAAGCAGTGAGCTGCTTG+TGG - chr5_4:12453680-12453699 None:intergenic 45.0%
CAGCTCACTGCTTTATAAGG+AGG + chr5_4:12453684-12453703 Msa0838120:CDS 45.0%
!! AGAAAGCACCTGAGAACTTC+AGG + chr5_4:12453826-12453845 Msa0838120:CDS 45.0%
AAGTCAAGCCTGAAGTTCTC+AGG - chr5_4:12453837-12453856 None:intergenic 45.0%
! CGTATTGTGCCATTCTGGTT+TGG - chr5_4:12453908-12453927 None:intergenic 45.0%
! TTCTGCGTATTGTGCCATTC+TGG - chr5_4:12453913-12453932 None:intergenic 45.0%
CACAATACGCAGAAGAGTTG+TGG + chr5_4:12453919-12453938 Msa0838120:CDS 45.0%
! CATGTGTGGACTGAAAGGAA+TGG + chr5_4:12453974-12453993 Msa0838120:CDS 45.0%
TGGACTGAAAGGAATGGAGA+AGG + chr5_4:12453980-12453999 Msa0838120:CDS 45.0%
GGACTGAAAGGAATGGAGAA+GGG + chr5_4:12453981-12454000 Msa0838120:CDS 45.0%
!! GCTCAACTGGTTTGAGCTAA+TGG + chr5_4:12454097-12454116 Msa0838120:intron 45.0%
AGTTGAAGAAGGCAGAGCAA+TGG + chr5_4:12454268-12454287 Msa0838120:CDS 45.0%
GAATATGCTGCTGCACAAAG+TGG - chr5_4:12454341-12454360 None:intergenic 45.0%
ATACTCATGCATGAGCCATC+AGG + chr5_4:12454605-12454624 Msa0838120:three_prime_UTR 45.0%
TACTAGGGATGAGGCAGATT+GGG + chr5_4:12454662-12454681 Msa0838120:three_prime_UTR 45.0%
CTCTAACTCGGACCAAAGTT+TGG + chr5_4:12454700-12454719 Msa0838120:three_prime_UTR 45.0%
GATCGGAAGAGAAGTGGAGT+TGG - chr5_4:12451291-12451310 None:intergenic 50.0%
ACTCCACTTCTCTTCCGATC+AGG + chr5_4:12451291-12451310 Msa0838120:CDS 50.0%
TGTCCTGATCGGAAGAGAAG+TGG - chr5_4:12451297-12451316 None:intergenic 50.0%
TTATCAGTGTCGTGTCCGGT+TGG - chr5_4:12451395-12451414 None:intergenic 50.0%
!! AGAAGCACCTGCTCCTGTTA+AGG + chr5_4:12451611-12451630 Msa0838120:CDS 50.0%
TTCACCAGGTGCATCATCAC+CGG - chr5_4:12451736-12451755 None:intergenic 50.0%
ACCTGGTGAAACTTGGCACA+TGG + chr5_4:12451746-12451765 Msa0838120:CDS 50.0%
ACCATGTGCCAAGTTTCACC+AGG - chr5_4:12451750-12451769 None:intergenic 50.0%
! GCACATGGTTTTCAGCACTG+AGG + chr5_4:12451761-12451780 Msa0838120:CDS 50.0%
AAACGCTCATGCGGATCAAG+TGG - chr5_4:12452021-12452040 None:intergenic 50.0%
CAAGTGGACAAACGCTCATG+CGG - chr5_4:12452030-12452049 None:intergenic 50.0%
GGAGAGGTTCCTTACAGAGA+AGG + chr5_4:12452275-12452294 Msa0838120:intron 50.0%
TATTCAGGCGACTTGAAGCC+TGG + chr5_4:12453069-12453088 Msa0838120:intron 50.0%
GTACAGATTACTGGCCCAGT+TGG + chr5_4:12453099-12453118 Msa0838120:CDS 50.0%
TCCTAATGCCACCGTCATCA+TGG + chr5_4:12453146-12453165 Msa0838120:CDS 50.0%
!! ACCATGATGACGGTGGCATT+AGG - chr5_4:12453150-12453169 None:intergenic 50.0%
! GGCAACGGTTGTGGATTTTC+TGG - chr5_4:12453417-12453436 None:intergenic 50.0%
! TGGTTTGGCATGGCTCTTCT+TGG + chr5_4:12453648-12453667 Msa0838120:CDS 50.0%
GGTTTGGCATGGCTCTTCTT+GGG + chr5_4:12453649-12453668 Msa0838120:CDS 50.0%
AAAGCAGTGAGCTGCTTGTG+GGG - chr5_4:12453678-12453697 None:intergenic 50.0%
GTTTCACTCGCTGCCAAAGA+AGG + chr5_4:12454020-12454039 Msa0838120:CDS 50.0%
ATGAAGCATAGAGGGGGGTT+TGG + chr5_4:12454071-12454090 Msa0838120:intron 50.0%
GTACTAGGGATGAGGCAGAT+TGG + chr5_4:12454661-12454680 Msa0838120:three_prime_UTR 50.0%
TGGTCCGAGTTAGAGACACT+GGG - chr5_4:12454695-12454714 None:intergenic 50.0%
TTGGTCCGAGTTAGAGACAC+TGG - chr5_4:12454696-12454715 None:intergenic 50.0%
GGAGTATGGAAAGGAGACGG+CGG - chr5_4:12451270-12451289 None:intergenic 55.0%
! CTTCAGATCGAAGGCGTGTC+CGG - chr5_4:12451476-12451495 None:intergenic 55.0%
! ATCACCGGTGATGATGCACC+TGG + chr5_4:12451729-12451748 Msa0838120:CDS 55.0%
CTGCAGTTGGGAACTGGTAC+TGG + chr5_4:12453279-12453298 Msa0838120:intron 55.0%
GGGGGTTTGGATAGCTCAAC+TGG + chr5_4:12454084-12454103 Msa0838120:intron 55.0%
TGAGCCATCAGGTTACGAGC+AGG + chr5_4:12454616-12454635 Msa0838120:three_prime_UTR 55.0%
GAGCCATCAGGTTACGAGCA+GGG + chr5_4:12454617-12454636 Msa0838120:three_prime_UTR 55.0%
AGCCATCAGGTTACGAGCAG+GGG + chr5_4:12454618-12454637 Msa0838120:three_prime_UTR 55.0%
CACCCCTGCTCGTAACCTGA+TGG - chr5_4:12454623-12454642 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 12450966 12454762 12450966 ID=Msa0838120;Name=Msa0838120
chr5_4 mRNA 12450966 12454762 12450966 ID=Msa0838120-mRNA-1;Parent=Msa0838120;Name=Msa0838120-mRNA-1;_AED=0.08;_eAED=0.08;_QI=282|1|1|1|1|1|9|454|361
chr5_4 exon 12450966 12451352 12450966 ID=Msa0838120-mRNA-1:exon:5461;Parent=Msa0838120-mRNA-1
chr5_4 exon 12451552 12451783 12451552 ID=Msa0838120-mRNA-1:exon:5462;Parent=Msa0838120-mRNA-1
chr5_4 exon 12452276 12452409 12452276 ID=Msa0838120-mRNA-1:exon:5463;Parent=Msa0838120-mRNA-1
chr5_4 exon 12452686 12452764 12452686 ID=Msa0838120-mRNA-1:exon:5464;Parent=Msa0838120-mRNA-1
chr5_4 exon 12453076 12453167 12453076 ID=Msa0838120-mRNA-1:exon:5465;Parent=Msa0838120-mRNA-1
chr5_4 exon 12453285 12453362 12453285 ID=Msa0838120-mRNA-1:exon:5466;Parent=Msa0838120-mRNA-1
chr5_4 exon 12453643 12453705 12453643 ID=Msa0838120-mRNA-1:exon:5467;Parent=Msa0838120-mRNA-1
chr5_4 exon 12453807 12454041 12453807 ID=Msa0838120-mRNA-1:exon:5468;Parent=Msa0838120-mRNA-1
chr5_4 exon 12454241 12454762 12454241 ID=Msa0838120-mRNA-1:exon:5469;Parent=Msa0838120-mRNA-1
chr5_4 five_prime_UTR 12450966 12451247 12450966 ID=Msa0838120-mRNA-1:five_prime_utr;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12451248 12451352 12451248 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12451552 12451783 12451552 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12452276 12452409 12452276 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12452686 12452764 12452686 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12453076 12453167 12453076 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12453285 12453362 12453285 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12453643 12453705 12453643 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12453807 12454041 12453807 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 CDS 12454241 12454308 12454241 ID=Msa0838120-mRNA-1:cds;Parent=Msa0838120-mRNA-1
chr5_4 three_prime_UTR 12454309 12454762 12454309 ID=Msa0838120-mRNA-1:three_prime_utr;Parent=Msa0838120-mRNA-1
Gene Sequence

>Msa0838120

ATGGCTGCTGCAGTTACAGCCGCCGTCTCCTTTCCATACTCCAACTCCACTTCTCTTCCGATCAGGACATCTGTTATTTCCCCAGATAGACTTGTCTTCAAAAAGGTTTCATTGAATAATGTTTCCATTAGTGGAAGGTTAACAGTCAGAGCCGAAGTTGCTACAGAAGCACCTGCTCCTGTTAAGGTAGAAAAGATATCAAAGAAACAGGAGGAAGGTATTGTTGTGAACAAGTTTAAACCAAAGACACCATACATTGGAAGGTGTCTTCTCAACACAAAGATCACCGGTGATGATGCACCTGGTGAAACTTGGCACATGGTTTTCAGCACTGAGGGAGAGGTTCCTTACAGAGAAGGACAATCAATTGGGATAGTTCCAGATGGTATTGACAAGAATGGAAAGCCTCACAAGCTGAGATTGTATTCAATTGCTAGCAGTGCTCTTGGTGATTTTGGAGACTCCAAAACTGTTTCTCTCTGTGTGAAACGTCTTGTGTACACAAATGATGCCGGAGAAGTTGTTAAGGGAGTCTGCTCTAATTTCTTGTGCGACTTGAAGCCTGGATCTGAAGTACAGATTACTGGCCCAGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTCATCATGTTGGGAACTGGTACTGGAATTGCCCCATTCCGCTCATTTTTATGGAAAATGTTCTTCGAGAAGCATGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCCACAAGCAGCTCACTGCTTTATAAGGAGGAATTTGAAAAGATGAAGGAGAAAGCACCTGAGAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAACAAGTAAACGACAAAGGAGAGAAAATGTACATCCAAACCAGAATGGCACAATACGCAGAAGAGTTGTGGGAATTACTGAAGAAAGACAACACTTTTGTTTACATGTGTGGACTGAAAGGAATGGAGAAGGGAATTGATGACATAATGGTTTCACTCGCTGCCAAAGAAGGTATTGATTGGACCGAGTACAAGAGACAGTTGAAGAAGGCAGAGCAATGGAATGTTGAAGTCTATTGA

Protein sequence

>Msa0838120

MAAAVTAAVSFPYSNSTSLPIRTSVISPDRLVFKKVSLNNVSISGRLTVRAEVATEAPAPVKVEKISKKQEEGIVVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVQITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKEGIDWTEYKRQLKKAEQWNVEVY*