AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0168050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0168050 MtrunA17_Chr1g0184201 92.500 640 16 1 1 608 1 640 0.0 1172
Msa0168050 MtrunA17_Chr6g0482501 29.583 551 301 15 88 604 25 522 1.02e-49 181
Msa0168050 MtrunA17_Chr5g0409391 47.561 82 42 1 116 197 33 113 4.02e-17 78.2
Msa0168050 MtrunA17_Chr6g0482481 40.909 88 50 1 519 604 92 179 2.67e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0168050 AT2G31270.1 52.830 212 82 3 410 606 352 560 7.56e-57 201
Msa0168050 AT2G31270.1 51.389 216 89 4 39 245 41 249 9.84e-49 179
Msa0168050 AT3G54710.1 50.311 161 77 3 87 247 27 184 2.17e-43 162
Msa0168050 AT3G54710.1 42.205 263 110 8 384 607 218 477 1.14e-40 155

Find 144 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTGCAGGTATGAGAATT+TGG 0.208186 1_4:+50315936 Msa0168050:intron
AGTGATGCTCTTAAGGATTC+AGG 0.231310 1_4:-50318291 None:intergenic
ATTAGATTGTTGCGATTAAA+AGG 0.237039 1_4:+50315988 Msa0168050:CDS
TGATCTACTTTCATATATTT+AGG 0.240656 1_4:+50318445 Msa0168050:three_prime_UTR
TCAGTTAAAGTTTCAATCTT+TGG 0.243781 1_4:-50316039 None:intergenic
TGAGTGAAGAAGAAGAATTT+TGG 0.250730 1_4:-50315409 None:intergenic
TGGGTGAATGTAAGAGAAAT+TGG 0.259359 1_4:-50315389 None:intergenic
TGTTGCAGGTATGAGAATTT+GGG 0.273987 1_4:+50315937 Msa0168050:intron
TCCATTCTTAATTAATTTCA+TGG 0.281488 1_4:-50318532 None:intergenic
AAGCGCAACGCCGCGGTTGC+GGG 0.283254 1_4:-50315603 None:intergenic
GTGCGCGACTCAATGAGTTT+TGG 0.299833 1_4:+50316354 Msa0168050:CDS
GCTAAGTTGTTGTCTGAATC+TGG 0.304619 1_4:+50316305 Msa0168050:CDS
TTCTTCAAGTGATGCTCTTA+AGG 0.317807 1_4:-50318298 None:intergenic
GAGAGGCAACTGCCGGCTTC+TGG 0.336485 1_4:-50317132 None:intergenic
CGGCGTTGCGCTTTCGATAT+CGG 0.348179 1_4:+50315613 Msa0168050:CDS
ATATTTAGGAGAGGTAAAAT+TGG 0.352217 1_4:+50318459 Msa0168050:three_prime_UTR
GGGTGAATGTAAGAGAAATT+GGG 0.355405 1_4:-50315388 None:intergenic
TCTGCAACAAGAAACATTTC+CGG 0.356727 1_4:-50318555 None:intergenic
GAGGTTTACCCATGCTCATT+TGG 0.363872 1_4:+50316157 Msa0168050:CDS
GCATCAAACTCAACTGCATC+AGG 0.365765 1_4:-50316284 None:intergenic
GAAGCTCATCCTGCGATTCA+TGG 0.369956 1_4:+50317337 Msa0168050:CDS
AGCTGGTAGAGTTGTCGTCT+GGG 0.393195 1_4:-50317552 None:intergenic
AGATTGAAACTTTAACTGAT+AGG 0.395153 1_4:+50316043 Msa0168050:CDS
GAGCTGGTAGAGTTGTCGTC+TGG 0.402340 1_4:-50317553 None:intergenic
AAAGCGCAACGCCGCGGTTG+CGG 0.415732 1_4:-50315604 None:intergenic
CTCAAACTTGACTCTGAAAC+GGG 0.425269 1_4:-50317247 None:intergenic
TTTGCTTTCTGTATACTCAA+TGG 0.428293 1_4:-50317413 None:intergenic
ACCGAATGGAGAAGATTATC+CGG 0.434254 1_4:-50317694 None:intergenic
CGCCTTCTCAGAAATCCATT+CGG 0.435905 1_4:-50318128 None:intergenic
TGAATCATGTTAAAGAGCTT+AGG 0.436584 1_4:-50317894 None:intergenic
CCCGGATAATCTTCTCCATT+CGG 0.449170 1_4:+50317693 Msa0168050:CDS
CATATCCATGTAAAACCAAA+AGG 0.449494 1_4:+50318617 Msa0168050:three_prime_UTR
GTTAAAGAGCTTAGGGAGGC+TGG 0.452098 1_4:-50317886 None:intergenic
GTAGCTGACATCAGCCTGGC+TGG 0.454247 1_4:-50317493 None:intergenic
GCCTTCTCAGAAATCCATTC+GGG 0.459518 1_4:-50318127 None:intergenic
CCGTTTCAGAGTCAAGTTTG+AGG 0.463611 1_4:+50317248 Msa0168050:CDS
CAATGAAATGACGTCGTTGA+AGG 0.463806 1_4:+50315682 Msa0168050:CDS
ACATGACTTTCTGAGTTAGC+AGG 0.467209 1_4:-50317073 None:intergenic
GGCTCAGGCAGCATTTCCTC+TGG 0.468683 1_4:-50316935 None:intergenic
TTGCGGGTTCGCATCGGTGG+TGG 0.469410 1_4:-50315587 None:intergenic
AAGAATAGCAATGGAGGAAA+GGG 0.469721 1_4:+50317821 Msa0168050:CDS
ACCATGAAATTAATTAAGAA+TGG 0.469813 1_4:+50318531 Msa0168050:three_prime_UTR
TGAAGGGAAAATCTGCTAGA+AGG 0.477915 1_4:+50315699 Msa0168050:CDS
GTGATGCTCTTAAGGATTCA+GGG 0.478740 1_4:-50318290 None:intergenic
GAGTATACAGAAAGCAAAGA+TGG 0.479585 1_4:+50317418 Msa0168050:CDS
TCATGCTTTGGACGACTGAA+TGG 0.481298 1_4:-50316956 None:intergenic
AAAGAATAGCAATGGAGGAA+AGG 0.482688 1_4:+50317820 Msa0168050:CDS
GGAGTAGATACAAATTTAGC+TGG 0.483928 1_4:-50317472 None:intergenic
GAATCATGTTAAAGAGCTTA+GGG 0.484737 1_4:-50317893 None:intergenic
CCTCAAACTTGACTCTGAAA+CGG 0.489617 1_4:-50317248 None:intergenic
AACCAACTTGTCCGGCGAGC+TGG 0.493098 1_4:-50317569 None:intergenic
TGTACAAGAGGATCATGCTT+TGG 0.499528 1_4:-50316968 None:intergenic
TTTATACTAACATGAAGATC+CGG 0.500484 1_4:-50316260 None:intergenic
CCGCGGTTGCGGGTTCGCAT+CGG 0.503017 1_4:-50315593 None:intergenic
TTAAGCGCCCACCTCGTTCA+AGG 0.503396 1_4:+50317590 Msa0168050:CDS
TTGACATTCCGTGTAGTTGG+TGG 0.504862 1_4:+50318420 Msa0168050:three_prime_UTR
GATTGCTATTAAGAAGTTGT+TGG 0.505832 1_4:+50316208 Msa0168050:CDS
CGCAGGATGAGCTTCACTAC+CGG 0.508826 1_4:-50317329 None:intergenic
TTCTTAGCTTGTGAGATAGC+TGG 0.511965 1_4:-50317846 None:intergenic
CTAAGTTGTTGTCTGAATCT+GGG 0.523632 1_4:+50316306 Msa0168050:CDS
GTTGCAGGTATGAGAATTTG+GGG 0.525927 1_4:+50315938 Msa0168050:intron
TTCTTAATAGCAATCGCCTC+AGG 0.526378 1_4:-50316200 None:intergenic
AATGAAATGACGTCGTTGAA+GGG 0.529956 1_4:+50315683 Msa0168050:CDS
AAAAGAAAGAATAGCAATGG+AGG 0.531135 1_4:+50317815 Msa0168050:CDS
AGGTGTAGCTAGTGTAACTC+TGG 0.532203 1_4:-50317383 None:intergenic
AATCCATGCTTACTGACTGC+TGG 0.534347 1_4:+50318580 Msa0168050:three_prime_UTR
CCGTTCTGTTATCACAAAAG+AGG 0.537384 1_4:+50317938 Msa0168050:CDS
TTTGGATCTGGTGTTGTGTG+AGG 0.537780 1_4:-50315480 None:intergenic
ATTCTGTAACCAACTCGGAT+GGG 0.538377 1_4:-50317303 None:intergenic
TTATTAGGGTTTAATAGCGC+GGG 0.539220 1_4:-50315353 None:intergenic
TCCCGAATGGATTTCTGAGA+AGG 0.541497 1_4:+50318126 Msa0168050:CDS
GAAATTAATTAAGAATGGAC+CGG 0.542580 1_4:+50318536 Msa0168050:three_prime_UTR
TTTGGACGACTGAATGGCTC+AGG 0.542814 1_4:-50316950 None:intergenic
TCAACTGTGCCAAATGAGCA+TGG 0.543850 1_4:-50316166 None:intergenic
GGGCGCTTAACCAACTTGTC+CGG 0.545875 1_4:-50317577 None:intergenic
TCTGAAACGGGCACAACTGA+GGG 0.546157 1_4:-50317235 None:intergenic
CGAGACTAGCATATCTCCAC+TGG 0.546554 1_4:-50318155 None:intergenic
TACCAGCTCGCCGGACAAGT+TGG 0.547251 1_4:+50317567 Msa0168050:CDS
GCTTCAACTGATGTCTCAGC+GGG 0.547713 1_4:-50317103 None:intergenic
GGATATTAGAAAAGTTGCTA+AGG 0.548634 1_4:+50315634 Msa0168050:CDS
GATGATTCATTGCTCTTCCG+AGG 0.549354 1_4:-50315740 None:intergenic
TAAAATATCCCCATCCGAGT+TGG 0.552390 1_4:+50317294 Msa0168050:CDS
CGGTTGCGGGTTCGCATCGG+TGG 0.552701 1_4:-50315590 None:intergenic
CCGAATGGAGAAGATTATCC+GGG 0.552846 1_4:-50317693 None:intergenic
GGCATATGAGAGGCAACTGC+CGG 0.557157 1_4:-50317139 None:intergenic
GATTCTGTAACCAACTCGGA+TGG 0.559752 1_4:-50317304 None:intergenic
TAACCAGCAGTCAGTAAGCA+TGG 0.562965 1_4:-50318583 None:intergenic
TGTTAGAATTAGTTCCCGAA+TGG 0.564240 1_4:+50318113 Msa0168050:CDS
GGTGAATGTAAGAGAAATTG+GGG 0.565693 1_4:-50315387 None:intergenic
TTCTGTAACCAACTCGGATG+GGG 0.565800 1_4:-50317302 None:intergenic
AACCGCCTTCTGAAAGATTG+AGG 0.565829 1_4:-50317160 None:intergenic
TGCCTCAATCTTTCAGAAGG+CGG 0.566754 1_4:+50317158 Msa0168050:CDS
CTCTGAAACGGGCACAACTG+AGG 0.566962 1_4:-50317236 None:intergenic
TCAATGACCTTGAACGAGGT+GGG 0.568176 1_4:-50317597 None:intergenic
TCTGAAGAACCATGAATCGC+AGG 0.570831 1_4:-50317346 None:intergenic
TACTTTCATATATTTAGGAG+AGG 0.575305 1_4:+50318450 Msa0168050:three_prime_UTR
TTCAATGACCTTGAACGAGG+TGG 0.577604 1_4:-50317598 None:intergenic
AAATCACATTGGCTTCTCCT+CGG 0.580298 1_4:+50315723 Msa0168050:CDS
TCTGAGAAGGCGGCCTCCAG+TGG 0.580751 1_4:+50318139 Msa0168050:CDS
TGAAGCTCTTAACCAGAAGC+CGG 0.583837 1_4:+50317120 Msa0168050:CDS
GATATTAGAAAAGTTGCTAA+GGG 0.589889 1_4:+50315635 Msa0168050:CDS
CGACAACTCTACCAGCTCGC+CGG 0.599025 1_4:+50317558 Msa0168050:CDS
ATATGCCTCAATCTTTCAGA+AGG 0.600109 1_4:+50317155 Msa0168050:CDS
AATTTGTATCTACTCCAGCC+AGG 0.603332 1_4:+50317479 Msa0168050:CDS
CTATCTCACAAGCTAAGAAG+CGG 0.603356 1_4:+50317850 Msa0168050:CDS
GAGTTGGTTACAGAATCATC+CGG 0.603380 1_4:+50317310 Msa0168050:CDS
TGCTAGAAGGCAAATCACAT+TGG 0.603766 1_4:+50315712 Msa0168050:CDS
CATGACTTTCTGAGTTAGCA+GGG 0.605336 1_4:-50317072 None:intergenic
TGGAGTTGACATAGCATCAA+CGG 0.606325 1_4:-50317452 None:intergenic
AGTATACAGAAAGCAAAGAT+GGG 0.606980 1_4:+50317419 Msa0168050:CDS
AGGTGTAGCTGACATCAGCC+TGG 0.607269 1_4:-50317497 None:intergenic
TTTATTAGGGTTTAATAGCG+CGG 0.607539 1_4:-50315354 None:intergenic
GGTTTCATCATGTGTACAAG+AGG 0.610647 1_4:-50316980 None:intergenic
CATCAAACTCAACTGCATCA+GGG 0.610741 1_4:-50316283 None:intergenic
ACACTATCATACCTCTGGGT+GGG 0.612575 1_4:-50316381 None:intergenic
CAACTGTGCCAAATGAGCAT+GGG 0.612717 1_4:-50316165 None:intergenic
GCGAACGAGTTGTATGAAGC+CGG 0.612998 1_4:+50316241 Msa0168050:CDS
TTCACTGCAGAGAATGATGA+GGG 0.616272 1_4:-50317004 None:intergenic
CCGATGCGAACCCGCAACCG+CGG 0.620178 1_4:+50315593 Msa0168050:CDS
CGAATGGATTTCTGAGAAGG+CGG 0.621345 1_4:+50318129 Msa0168050:CDS
TACTTCTATCAACAATATCA+CGG 0.628510 1_4:-50317989 None:intergenic
TTTCACTGCAGAGAATGATG+AGG 0.630337 1_4:-50317005 None:intergenic
TTGAATGAATCAGATTGAAG+TGG 0.633850 1_4:-50317211 None:intergenic
CACACTATCATACCTCTGGG+TGG 0.639190 1_4:-50316382 None:intergenic
GTAGCTAGTGTAACTCTGGA+TGG 0.641322 1_4:-50317379 None:intergenic
AGATCAAACCACCAACTACA+CGG 0.644175 1_4:-50318428 None:intergenic
GCTGGTAGAGTTGTCGTCTG+GGG 0.645341 1_4:-50317551 None:intergenic
GAGGATAAATTCCACCTCTG+AGG 0.652789 1_4:+50317267 Msa0168050:CDS
AATTTCAATGACCTTGAACG+AGG 0.653533 1_4:-50317601 None:intergenic
TTGCAGGTATGAGAATTTGG+GGG 0.655048 1_4:+50315939 Msa0168050:intron
GGATGATTCTGTAACCAACT+CGG 0.657748 1_4:-50317308 None:intergenic
AGCTTCAACTGATGTCTCAG+CGG 0.660010 1_4:-50317104 None:intergenic
GACTAGCATATCTCCACTGG+AGG 0.665848 1_4:-50318152 None:intergenic
ACTGCAGAGAATGATGAGGG+AGG 0.673341 1_4:-50317001 None:intergenic
AATCTGGGACTATGTCTCTG+AGG 0.683217 1_4:+50316321 Msa0168050:CDS
GAAAGATTGAGGCATATGAG+AGG 0.683357 1_4:-50317149 None:intergenic
ATAGGCTGATGAAGTTCCAG+AGG 0.688686 1_4:+50316919 Msa0168050:intron
GTGTTGTGTGAGGATTGTGA+AGG 0.688886 1_4:-50315470 None:intergenic
ATATCGAAAGCGCAACGCCG+CGG 0.697463 1_4:-50315610 None:intergenic
ACGTGCTTCTAGTGACATTG+TGG 0.700767 1_4:+50317039 Msa0168050:CDS
AATGGAGAAGATTATCCGGG+AGG 0.714359 1_4:-50317690 None:intergenic
TCATGTTAAAGAGCTTAGGG+AGG 0.717982 1_4:-50317890 None:intergenic
TTCTATCAACAATATCACGG+TGG 0.721589 1_4:-50317986 None:intergenic
GTGAATGTAAGAGAAATTGG+GGG 0.824620 1_4:-50315386 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTTGATTTATTTTA+TGG + chr1_4:50315906-50315925 Msa0168050:intron 10.0%
!!! TTTTTGTTGATTTATTTTAT+GGG + chr1_4:50315907-50315926 Msa0168050:intron 10.0%
!!! TTTTTCAAAAATTTGTATTT+AGG + chr1_4:50316097-50316116 Msa0168050:intron 10.0%
!!! TATATTGTTTTTTTTCTTTT+GGG + chr1_4:50318368-50318387 Msa0168050:three_prime_UTR 10.0%
!! AATAATATGCAATTTCTAAA+AGG - chr1_4:50316876-50316895 None:intergenic 15.0%
!! TCACTCATAAAAATAAATAA+AGG - chr1_4:50317759-50317778 None:intergenic 15.0%
!!! GTATATTGTTTTTTTTCTTT+TGG + chr1_4:50318367-50318386 Msa0168050:three_prime_UTR 15.0%
!!! ATTTTGAATTTTCAGATCTA+GGG + chr1_4:50315784-50315803 Msa0168050:intron 20.0%
!!! TTTTTATGATTTGTTTGATG+TGG + chr1_4:50315826-50315845 Msa0168050:intron 20.0%
!!! TCTTAAGCATTTTGAAATTT+TGG + chr1_4:50315859-50315878 Msa0168050:intron 20.0%
!!! TAGTTTTGCATTTTATTTGT+GGG + chr1_4:50316511-50316530 Msa0168050:intron 20.0%
!!! TAAATGATGCTTTTATGTAT+AGG + chr1_4:50316901-50316920 Msa0168050:intron 20.0%
!! ATATAATCAATACAATGACA+GGG - chr1_4:50318233-50318252 None:intergenic 20.0%
!! AATATAATCAATACAATGAC+AGG - chr1_4:50318234-50318253 None:intergenic 20.0%
!! TGATCTACTTTCATATATTT+AGG + chr1_4:50318445-50318464 Msa0168050:three_prime_UTR 20.0%
!! ACCATGAAATTAATTAAGAA+TGG + chr1_4:50318531-50318550 Msa0168050:three_prime_UTR 20.0%
!! TCCATTCTTAATTAATTTCA+TGG - chr1_4:50318535-50318554 None:intergenic 20.0%
! GATATTAGAAAAGTTGCTAA+GGG + chr1_4:50315635-50315654 Msa0168050:CDS 25.0%
!!! ATTCAAAATGCTTACTTTTC+AGG - chr1_4:50315773-50315792 None:intergenic 25.0%
!! CATTTTGAATTTTCAGATCT+AGG + chr1_4:50315783-50315802 Msa0168050:intron 25.0%
!!! CATTTTGAAATTTTGGATCT+AGG + chr1_4:50315866-50315885 Msa0168050:intron 25.0%
!! AAATTTTGGATCTAGGTTTT+TGG + chr1_4:50315873-50315892 Msa0168050:intron 25.0%
! ATTAGATTGTTGCGATTAAA+AGG + chr1_4:50315988-50316007 Msa0168050:CDS 25.0%
! TCAGTTAAAGTTTCAATCTT+TGG - chr1_4:50316042-50316061 None:intergenic 25.0%
! AGATTGAAACTTTAACTGAT+AGG + chr1_4:50316043-50316062 Msa0168050:CDS 25.0%
!!! TAGGATTTTTTTTCTGATTG+TGG + chr1_4:50316116-50316135 Msa0168050:intron 25.0%
!!! AGGATTTTTTTTCTGATTGT+GGG + chr1_4:50316117-50316136 Msa0168050:intron 25.0%
! TTTATACTAACATGAAGATC+CGG - chr1_4:50316263-50316282 None:intergenic 25.0%
!! TTGATATTTCATTTTGCTTG+TGG + chr1_4:50316461-50316480 Msa0168050:intron 25.0%
!!! CTAGTTTTGCATTTTATTTG+TGG + chr1_4:50316510-50316529 Msa0168050:intron 25.0%
! ACAAGAGAAATTTCATACAT+TGG + chr1_4:50316534-50316553 Msa0168050:intron 25.0%
! AAACCAATCAACATAATAAG+TGG - chr1_4:50316569-50316588 None:intergenic 25.0%
!! ACTTATTATGTTGATTGGTT+TGG + chr1_4:50316568-50316587 Msa0168050:intron 25.0%
! TAATGCTAATTCTGAGTAAA+AGG + chr1_4:50316720-50316739 Msa0168050:intron 25.0%
! TGAAAGTAACTTAAAGTCTA+AGG + chr1_4:50316780-50316799 Msa0168050:intron 25.0%
!! ATGATGTTAACTTTTGATGA+TGG + chr1_4:50316820-50316839 Msa0168050:intron 25.0%
!!! TGATGTTAACTTTTGATGAT+GGG + chr1_4:50316821-50316840 Msa0168050:intron 25.0%
!!! GCATCATTTTCATTTTTCAT+AGG - chr1_4:50317634-50317653 None:intergenic 25.0%
! ATGAAAAATGAAAATGATGC+TGG + chr1_4:50317634-50317653 Msa0168050:CDS 25.0%
! TACTTCTATCAACAATATCA+CGG - chr1_4:50317992-50318011 None:intergenic 25.0%
! TCTCTATGAAACATAATTGA+CGG + chr1_4:50318019-50318038 Msa0168050:intron 25.0%
! TGGAATTGTAAATTCATAAC+AGG - chr1_4:50318206-50318225 None:intergenic 25.0%
! TACTTTCATATATTTAGGAG+AGG + chr1_4:50318450-50318469 Msa0168050:three_prime_UTR 25.0%
! ATATTTAGGAGAGGTAAAAT+TGG + chr1_4:50318459-50318478 Msa0168050:three_prime_UTR 25.0%
!! GTAGATCAACTCATATTTTT+GGG + chr1_4:50318481-50318500 Msa0168050:three_prime_UTR 25.0%
! GAAATTAATTAAGAATGGAC+CGG + chr1_4:50318536-50318555 Msa0168050:three_prime_UTR 25.0%
!!! ATTTTCCTTTTGGTTTTACA+TGG - chr1_4:50318625-50318644 None:intergenic 25.0%
TTTATTAGGGTTTAATAGCG+CGG - chr1_4:50315357-50315376 None:intergenic 30.0%
!! GGGGTGGATTTTATTTATTA+GGG - chr1_4:50315370-50315389 None:intergenic 30.0%
! GAGTGAAGAAGAAGAATTTT+GGG - chr1_4:50315411-50315430 None:intergenic 30.0%
! TGAGTGAAGAAGAAGAATTT+TGG - chr1_4:50315412-50315431 None:intergenic 30.0%
! TGAAGAAGTTTTCATGGTTA+TGG - chr1_4:50315444-50315463 None:intergenic 30.0%
!! AGTTTCTGAAGAAGTTTTCA+TGG - chr1_4:50315450-50315469 None:intergenic 30.0%
!!! GTTTTTGAGGTTAGTTCAAT+TGG - chr1_4:50315545-50315564 None:intergenic 30.0%
GGATATTAGAAAAGTTGCTA+AGG + chr1_4:50315634-50315653 Msa0168050:CDS 30.0%
!! ATTTTCAGATCTAGGGTTTT+TGG + chr1_4:50315791-50315810 Msa0168050:intron 30.0%
!!! TTATGGGTTTTTTTTGTTGC+AGG + chr1_4:50315923-50315942 Msa0168050:intron 30.0%
!!! TTTTTTTCTGATTGTGGGTT+TGG + chr1_4:50316122-50316141 Msa0168050:intron 30.0%
!!! GTTGAAGTTTATTTTACCTG+AGG + chr1_4:50316184-50316203 Msa0168050:CDS 30.0%
! GATTGCTATTAAGAAGTTGT+TGG + chr1_4:50316208-50316227 Msa0168050:CDS 30.0%
GAGAAATTTCATACATTGGT+TGG + chr1_4:50316538-50316557 Msa0168050:intron 30.0%
! AAATTTCATACATTGGTTGG+TGG + chr1_4:50316541-50316560 Msa0168050:intron 30.0%
GTTCCACTTATTATGTTGAT+TGG + chr1_4:50316563-50316582 Msa0168050:intron 30.0%
! TTGTCACTATGAGATTTTGA+TGG + chr1_4:50316655-50316674 Msa0168050:intron 30.0%
! GCGGTTTTCTCAAAAATTAA+AGG + chr1_4:50317177-50317196 Msa0168050:CDS 30.0%
TTGAATGAATCAGATTGAAG+TGG - chr1_4:50317214-50317233 None:intergenic 30.0%
TTTGCTTTCTGTATACTCAA+TGG - chr1_4:50317416-50317435 None:intergenic 30.0%
AGTATACAGAAAGCAAAGAT+GGG + chr1_4:50317419-50317438 Msa0168050:CDS 30.0%
! GTCATAAAACTTCTTTTAGG+TGG - chr1_4:50317532-50317551 None:intergenic 30.0%
AAAAATGAAAATGATGCTGG+CGG + chr1_4:50317637-50317656 Msa0168050:CDS 30.0%
GGAAAAAGAAAGAATAGCAA+TGG + chr1_4:50317812-50317831 Msa0168050:CDS 30.0%
AAAAGAAAGAATAGCAATGG+AGG + chr1_4:50317815-50317834 Msa0168050:CDS 30.0%
GAATCATGTTAAAGAGCTTA+GGG - chr1_4:50317896-50317915 None:intergenic 30.0%
TGAATCATGTTAAAGAGCTT+AGG - chr1_4:50317897-50317916 None:intergenic 30.0%
CTCTATGAAACATAATTGAC+GGG + chr1_4:50318020-50318039 Msa0168050:intron 30.0%
AACTTCACCTAAGAAAACAA+GGG - chr1_4:50318074-50318093 None:intergenic 30.0%
TTGAAGAAGCAAAATGAGTA+AGG + chr1_4:50318313-50318332 Msa0168050:intron 30.0%
! GGTAGATCAACTCATATTTT+TGG + chr1_4:50318480-50318499 Msa0168050:three_prime_UTR 30.0%
!!! AACTCATATTTTTGGGCAAA+TGG + chr1_4:50318488-50318507 Msa0168050:three_prime_UTR 30.0%
! GGTTTTACATGGATATGAAA+AGG - chr1_4:50318614-50318633 None:intergenic 30.0%
CATATCCATGTAAAACCAAA+AGG + chr1_4:50318617-50318636 Msa0168050:three_prime_UTR 30.0%
!! GGGGGTGGATTTTATTTATT+AGG - chr1_4:50315371-50315390 None:intergenic 35.0%
GTGAATGTAAGAGAAATTGG+GGG - chr1_4:50315389-50315408 None:intergenic 35.0%
GGTGAATGTAAGAGAAATTG+GGG - chr1_4:50315390-50315409 None:intergenic 35.0%
GGGTGAATGTAAGAGAAATT+GGG - chr1_4:50315391-50315410 None:intergenic 35.0%
TGGGTGAATGTAAGAGAAAT+TGG - chr1_4:50315392-50315411 None:intergenic 35.0%
!!! AAGATTGGGTTTTTTGGATC+TGG - chr1_4:50315495-50315514 None:intergenic 35.0%
! GATTTTGAGCTACGAAGATT+GGG - chr1_4:50315509-50315528 None:intergenic 35.0%
! AGATTTTGAGCTACGAAGAT+TGG - chr1_4:50315510-50315529 None:intergenic 35.0%
!!! TGATTTTTCTGGGGTTTTTG+AGG - chr1_4:50315558-50315577 None:intergenic 35.0%
AAAAACCCCAGAAAAATCAC+TGG + chr1_4:50315559-50315578 Msa0168050:CDS 35.0%
AATGAAATGACGTCGTTGAA+GGG + chr1_4:50315683-50315702 Msa0168050:CDS 35.0%
TTGTTGCAGGTATGAGAATT+TGG + chr1_4:50315936-50315955 Msa0168050:intron 35.0%
TGTTGCAGGTATGAGAATTT+GGG + chr1_4:50315937-50315956 Msa0168050:intron 35.0%
CTAAGTTGTTGTCTGAATCT+GGG + chr1_4:50316306-50316325 Msa0168050:CDS 35.0%
GTTTGGTAGAAAGAATAGTC+AGG + chr1_4:50316585-50316604 Msa0168050:intron 35.0%
!!! TAACTTTTGATGATGGGTTG+AGG + chr1_4:50316827-50316846 Msa0168050:intron 35.0%
ATATGCCTCAATCTTTCAGA+AGG + chr1_4:50317155-50317174 Msa0168050:CDS 35.0%
!! GTATACTCAATGGTTTTGCT+AGG - chr1_4:50317406-50317425 None:intergenic 35.0%
GAGTATACAGAAAGCAAAGA+TGG + chr1_4:50317418-50317437 Msa0168050:CDS 35.0%
GGAGTAGATACAAATTTAGC+TGG - chr1_4:50317475-50317494 None:intergenic 35.0%
! GGGGTCATAAAACTTCTTTT+AGG - chr1_4:50317535-50317554 None:intergenic 35.0%
AATTTCAATGACCTTGAACG+AGG - chr1_4:50317604-50317623 None:intergenic 35.0%
! TGACATTTTTGATATCCTCC+CGG + chr1_4:50317675-50317694 Msa0168050:CDS 35.0%
! AAACAAAAGAGCATACCGAA+TGG - chr1_4:50317711-50317730 None:intergenic 35.0%
AAAGAATAGCAATGGAGGAA+AGG + chr1_4:50317820-50317839 Msa0168050:CDS 35.0%
AAGAATAGCAATGGAGGAAA+GGG + chr1_4:50317821-50317840 Msa0168050:CDS 35.0%
! CCTCTTTTGTGATAACAGAA+CGG - chr1_4:50317941-50317960 None:intergenic 35.0%
TTCTATCAACAATATCACGG+TGG - chr1_4:50317989-50318008 None:intergenic 35.0%
!!! ACTAAACCCCTTGTTTTCTT+AGG + chr1_4:50318064-50318083 Msa0168050:intron 35.0%
ACTTCACCTAAGAAAACAAG+GGG - chr1_4:50318073-50318092 None:intergenic 35.0%
CAACTTCACCTAAGAAAACA+AGG - chr1_4:50318075-50318094 None:intergenic 35.0%
TGTTAGAATTAGTTCCCGAA+TGG + chr1_4:50318113-50318132 Msa0168050:CDS 35.0%
TTCTTCAAGTGATGCTCTTA+AGG - chr1_4:50318301-50318320 None:intergenic 35.0%
AAGAAGCAAAATGAGTAAGG+AGG + chr1_4:50318316-50318335 Msa0168050:intron 35.0%
TCTGCAACAAGAAACATTTC+CGG - chr1_4:50318558-50318577 None:intergenic 35.0%
AATGTAAGAGAAATTGGGGG+TGG - chr1_4:50315386-50315405 None:intergenic 40.0%
!!! GCTACGAAGATTGGGTTTTT+TGG - chr1_4:50315501-50315520 None:intergenic 40.0%
! CTTCTCCAGTGATTTTTCTG+GGG - chr1_4:50315567-50315586 None:intergenic 40.0%
! GCTTCTCCAGTGATTTTTCT+GGG - chr1_4:50315568-50315587 None:intergenic 40.0%
CAATGAAATGACGTCGTTGA+AGG + chr1_4:50315682-50315701 Msa0168050:CDS 40.0%
TGAAGGGAAAATCTGCTAGA+AGG + chr1_4:50315699-50315718 Msa0168050:CDS 40.0%
TGCTAGAAGGCAAATCACAT+TGG + chr1_4:50315712-50315731 Msa0168050:CDS 40.0%
!! AAATCACATTGGCTTCTCCT+CGG + chr1_4:50315723-50315742 Msa0168050:CDS 40.0%
GTTGCAGGTATGAGAATTTG+GGG + chr1_4:50315938-50315957 Msa0168050:intron 40.0%
TTGCAGGTATGAGAATTTGG+GGG + chr1_4:50315939-50315958 Msa0168050:intron 40.0%
! GTGGGTTTGGATGAGTTTTT+AGG + chr1_4:50316135-50316154 Msa0168050:intron 40.0%
!! GGTTTGGATGAGTTTTTAGG+AGG + chr1_4:50316138-50316157 Msa0168050:intron 40.0%
TTCTTAATAGCAATCGCCTC+AGG - chr1_4:50316203-50316222 None:intergenic 40.0%
CATCAAACTCAACTGCATCA+GGG - chr1_4:50316286-50316305 None:intergenic 40.0%
GCTAAGTTGTTGTCTGAATC+TGG + chr1_4:50316305-50316324 Msa0168050:CDS 40.0%
ATGCACACTATCATACCTCT+GGG - chr1_4:50316388-50316407 None:intergenic 40.0%
GTAGAAAGAATAGTCAGGTG+TGG + chr1_4:50316590-50316609 Msa0168050:intron 40.0%
AAAGAATAGTCAGGTGTGGT+GGG + chr1_4:50316594-50316613 Msa0168050:intron 40.0%
TGTACAAGAGGATCATGCTT+TGG - chr1_4:50316971-50316990 None:intergenic 40.0%
GGTTTCATCATGTGTACAAG+AGG - chr1_4:50316983-50317002 None:intergenic 40.0%
TTCACTGCAGAGAATGATGA+GGG - chr1_4:50317007-50317026 None:intergenic 40.0%
TTTCACTGCAGAGAATGATG+AGG - chr1_4:50317008-50317027 None:intergenic 40.0%
CATGACTTTCTGAGTTAGCA+GGG - chr1_4:50317075-50317094 None:intergenic 40.0%
ACATGACTTTCTGAGTTAGC+AGG - chr1_4:50317076-50317095 None:intergenic 40.0%
GAAAGATTGAGGCATATGAG+AGG - chr1_4:50317152-50317171 None:intergenic 40.0%
!! CTCAAACTTGACTCTGAAAC+GGG - chr1_4:50317250-50317269 None:intergenic 40.0%
! CCTCAAACTTGACTCTGAAA+CGG - chr1_4:50317251-50317270 None:intergenic 40.0%
! ACTCGGATGGGGATATTTTA+GGG - chr1_4:50317294-50317313 None:intergenic 40.0%
! AACTCGGATGGGGATATTTT+AGG - chr1_4:50317295-50317314 None:intergenic 40.0%
TAAAATATCCCCATCCGAGT+TGG + chr1_4:50317294-50317313 Msa0168050:CDS 40.0%
ATTCTGTAACCAACTCGGAT+GGG - chr1_4:50317306-50317325 None:intergenic 40.0%
GGATGATTCTGTAACCAACT+CGG - chr1_4:50317311-50317330 None:intergenic 40.0%
! GAGTTGGTTACAGAATCATC+CGG + chr1_4:50317310-50317329 Msa0168050:CDS 40.0%
!! CATAGCATCAACGGTTTTGA+AGG - chr1_4:50317446-50317465 None:intergenic 40.0%
TGGAGTTGACATAGCATCAA+CGG - chr1_4:50317455-50317474 None:intergenic 40.0%
AATTTGTATCTACTCCAGCC+AGG + chr1_4:50317479-50317498 Msa0168050:CDS 40.0%
ACCGAATGGAGAAGATTATC+CGG - chr1_4:50317697-50317716 None:intergenic 40.0%
! CTTTTTCCTGAATCTGCAGA+AGG - chr1_4:50317800-50317819 None:intergenic 40.0%
!! TTCTTAGCTTGTGAGATAGC+TGG - chr1_4:50317849-50317868 None:intergenic 40.0%
CTATCTCACAAGCTAAGAAG+CGG + chr1_4:50317850-50317869 Msa0168050:CDS 40.0%
TCATGTTAAAGAGCTTAGGG+AGG - chr1_4:50317893-50317912 None:intergenic 40.0%
CCGTTCTGTTATCACAAAAG+AGG + chr1_4:50317938-50317957 Msa0168050:CDS 40.0%
CAATACAATGACAGGGTTGT+TGG - chr1_4:50318226-50318245 None:intergenic 40.0%
GTGATGCTCTTAAGGATTCA+GGG - chr1_4:50318293-50318312 None:intergenic 40.0%
AGTGATGCTCTTAAGGATTC+AGG - chr1_4:50318294-50318313 None:intergenic 40.0%
! CTTTTGACATTCCGTGTAGT+TGG + chr1_4:50318417-50318436 Msa0168050:three_prime_UTR 40.0%
AGATCAAACCACCAACTACA+CGG - chr1_4:50318431-50318450 None:intergenic 40.0%
GTGTTGTGTGAGGATTGTGA+AGG - chr1_4:50315473-50315492 None:intergenic 45.0%
!! TTTGGATCTGGTGTTGTGTG+AGG - chr1_4:50315483-50315502 None:intergenic 45.0%
! GGCTTCTCCAGTGATTTTTC+TGG - chr1_4:50315569-50315588 None:intergenic 45.0%
GATGATTCATTGCTCTTCCG+AGG - chr1_4:50315743-50315762 None:intergenic 45.0%
!!! GGGGGAGTTTTTTGATAGCT+TGG + chr1_4:50315957-50315976 Msa0168050:CDS 45.0%
GAGGTTTACCCATGCTCATT+TGG + chr1_4:50316157-50316176 Msa0168050:CDS 45.0%
CAACTGTGCCAAATGAGCAT+GGG - chr1_4:50316168-50316187 None:intergenic 45.0%
TCAACTGTGCCAAATGAGCA+TGG - chr1_4:50316169-50316188 None:intergenic 45.0%
GCATCAAACTCAACTGCATC+AGG - chr1_4:50316287-50316306 None:intergenic 45.0%
! AATCTGGGACTATGTCTCTG+AGG + chr1_4:50316321-50316340 Msa0168050:CDS 45.0%
ACACTATCATACCTCTGGGT+GGG - chr1_4:50316384-50316403 None:intergenic 45.0%
CATGCACACTATCATACCTC+TGG - chr1_4:50316389-50316408 None:intergenic 45.0%
GAAAGAATAGTCAGGTGTGG+TGG + chr1_4:50316593-50316612 Msa0168050:intron 45.0%
TGAGTAAAAGGCCAAGTCTG+TGG + chr1_4:50316732-50316751 Msa0168050:intron 45.0%
GAGTAAAAGGCCAAGTCTGT+GGG + chr1_4:50316733-50316752 Msa0168050:intron 45.0%
! AACAAAGTGTCCCACAGACT+TGG - chr1_4:50316746-50316765 None:intergenic 45.0%
ATAGGCTGATGAAGTTCCAG+AGG + chr1_4:50316919-50316938 Msa0168050:intron 45.0%
! TCATGCTTTGGACGACTGAA+TGG - chr1_4:50316959-50316978 None:intergenic 45.0%
ACGTGCTTCTAGTGACATTG+TGG + chr1_4:50317039-50317058 Msa0168050:CDS 45.0%
AGCTTCAACTGATGTCTCAG+CGG - chr1_4:50317107-50317126 None:intergenic 45.0%
TGAAGCTCTTAACCAGAAGC+CGG + chr1_4:50317120-50317139 Msa0168050:CDS 45.0%
TGCCTCAATCTTTCAGAAGG+CGG + chr1_4:50317158-50317177 Msa0168050:CDS 45.0%
! AACCGCCTTCTGAAAGATTG+AGG - chr1_4:50317163-50317182 None:intergenic 45.0%
CCGTTTCAGAGTCAAGTTTG+AGG + chr1_4:50317248-50317267 Msa0168050:CDS 45.0%
GAGGATAAATTCCACCTCTG+AGG + chr1_4:50317267-50317286 Msa0168050:CDS 45.0%
!! TATTTTAGGGACCTCAGAGG+TGG - chr1_4:50317281-50317300 None:intergenic 45.0%
!! GGATATTTTAGGGACCTCAG+AGG - chr1_4:50317284-50317303 None:intergenic 45.0%
TTCTGTAACCAACTCGGATG+GGG - chr1_4:50317305-50317324 None:intergenic 45.0%
GATTCTGTAACCAACTCGGA+TGG - chr1_4:50317307-50317326 None:intergenic 45.0%
TCTGAAGAACCATGAATCGC+AGG - chr1_4:50317349-50317368 None:intergenic 45.0%
GTAGCTAGTGTAACTCTGGA+TGG - chr1_4:50317382-50317401 None:intergenic 45.0%
AGGTGTAGCTAGTGTAACTC+TGG - chr1_4:50317386-50317405 None:intergenic 45.0%
!! CTTTTAGGTGGCTTCAATGC+AGG - chr1_4:50317520-50317539 None:intergenic 45.0%
TCAATGACCTTGAACGAGGT+GGG - chr1_4:50317600-50317619 None:intergenic 45.0%
TTCAATGACCTTGAACGAGG+TGG - chr1_4:50317601-50317620 None:intergenic 45.0%
AATGGAGAAGATTATCCGGG+AGG - chr1_4:50317693-50317712 None:intergenic 45.0%
CCGAATGGAGAAGATTATCC+GGG - chr1_4:50317696-50317715 None:intergenic 45.0%
CCCGGATAATCTTCTCCATT+CGG + chr1_4:50317693-50317712 Msa0168050:CDS 45.0%
ACCATTCCTTCTGCAGATTC+AGG + chr1_4:50317791-50317810 Msa0168050:intron 45.0%
TCCTGAATCTGCAGAAGGAA+TGG - chr1_4:50317795-50317814 None:intergenic 45.0%
! TCCCGAATGGATTTCTGAGA+AGG + chr1_4:50318126-50318145 Msa0168050:CDS 45.0%
GCCTTCTCAGAAATCCATTC+GGG - chr1_4:50318130-50318149 None:intergenic 45.0%
CGCCTTCTCAGAAATCCATT+CGG - chr1_4:50318131-50318150 None:intergenic 45.0%
! CGAATGGATTTCTGAGAAGG+CGG + chr1_4:50318129-50318148 Msa0168050:CDS 45.0%
AAGGAGGAGCTTAGACACAT+TGG + chr1_4:50318332-50318351 Msa0168050:intron 45.0%
TTGACATTCCGTGTAGTTGG+TGG + chr1_4:50318420-50318439 Msa0168050:three_prime_UTR 45.0%
! AATCCATGCTTACTGACTGC+TGG + chr1_4:50318580-50318599 Msa0168050:three_prime_UTR 45.0%
TAACCAGCAGTCAGTAAGCA+TGG - chr1_4:50318586-50318605 None:intergenic 45.0%
GCGAACGAGTTGTATGAAGC+CGG + chr1_4:50316241-50316260 Msa0168050:CDS 50.0%
! GTGCGCGACTCAATGAGTTT+TGG + chr1_4:50316354-50316373 Msa0168050:CDS 50.0%
!!! GTTTTGGAAATCCCACCCAG+AGG + chr1_4:50316370-50316389 Msa0168050:CDS 50.0%
CACACTATCATACCTCTGGG+TGG - chr1_4:50316385-50316404 None:intergenic 50.0%
TTTGGACGACTGAATGGCTC+AGG - chr1_4:50316953-50316972 None:intergenic 50.0%
ACTGCAGAGAATGATGAGGG+AGG - chr1_4:50317004-50317023 None:intergenic 50.0%
GCTTCAACTGATGTCTCAGC+GGG - chr1_4:50317106-50317125 None:intergenic 50.0%
! TCTGAAACGGGCACAACTGA+GGG - chr1_4:50317238-50317257 None:intergenic 50.0%
GAAGCTCATCCTGCGATTCA+TGG + chr1_4:50317337-50317356 Msa0168050:CDS 50.0%
AGCTGGTAGAGTTGTCGTCT+GGG - chr1_4:50317555-50317574 None:intergenic 50.0%
GTTAAAGAGCTTAGGGAGGC+TGG - chr1_4:50317889-50317908 None:intergenic 50.0%
GACTAGCATATCTCCACTGG+AGG - chr1_4:50318155-50318174 None:intergenic 50.0%
CGAGACTAGCATATCTCCAC+TGG - chr1_4:50318158-50318177 None:intergenic 50.0%
! ATATCGAAAGCGCAACGCCG+CGG - chr1_4:50315613-50315632 None:intergenic 55.0%
CGGCGTTGCGCTTTCGATAT+CGG + chr1_4:50315613-50315632 Msa0168050:CDS 55.0%
GGCATATGAGAGGCAACTGC+CGG - chr1_4:50317142-50317161 None:intergenic 55.0%
!! CTCTGAAACGGGCACAACTG+AGG - chr1_4:50317239-50317258 None:intergenic 55.0%
CGCAGGATGAGCTTCACTAC+CGG - chr1_4:50317332-50317351 None:intergenic 55.0%
AGGTGTAGCTGACATCAGCC+TGG - chr1_4:50317500-50317519 None:intergenic 55.0%
GCTGGTAGAGTTGTCGTCTG+GGG - chr1_4:50317554-50317573 None:intergenic 55.0%
GAGCTGGTAGAGTTGTCGTC+TGG - chr1_4:50317556-50317575 None:intergenic 55.0%
GGGCGCTTAACCAACTTGTC+CGG - chr1_4:50317580-50317599 None:intergenic 55.0%
TTAAGCGCCCACCTCGTTCA+AGG + chr1_4:50317590-50317609 Msa0168050:CDS 55.0%
GGCTCAGGCAGCATTTCCTC+TGG - chr1_4:50316938-50316957 None:intergenic 60.0%
GTAGCTGACATCAGCCTGGC+TGG - chr1_4:50317496-50317515 None:intergenic 60.0%
CGACAACTCTACCAGCTCGC+CGG + chr1_4:50317558-50317577 Msa0168050:CDS 60.0%
TACCAGCTCGCCGGACAAGT+TGG + chr1_4:50317567-50317586 Msa0168050:CDS 60.0%
AACCAACTTGTCCGGCGAGC+TGG - chr1_4:50317572-50317591 None:intergenic 60.0%
! TTGCGGGTTCGCATCGGTGG+TGG - chr1_4:50315590-50315609 None:intergenic 65.0%
AAAGCGCAACGCCGCGGTTG+CGG - chr1_4:50315607-50315626 None:intergenic 65.0%
!! GAGAGGCAACTGCCGGCTTC+TGG - chr1_4:50317135-50317154 None:intergenic 65.0%
TCTGAGAAGGCGGCCTCCAG+TGG + chr1_4:50318139-50318158 Msa0168050:CDS 65.0%
CGGTTGCGGGTTCGCATCGG+TGG - chr1_4:50315593-50315612 None:intergenic 70.0%
CCGCGGTTGCGGGTTCGCAT+CGG - chr1_4:50315596-50315615 None:intergenic 70.0%
CCGATGCGAACCCGCAACCG+CGG + chr1_4:50315593-50315612 Msa0168050:CDS 70.0%
AAGCGCAACGCCGCGGTTGC+GGG - chr1_4:50315606-50315625 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 50315354 50318649 50315354 ID=Msa0168050;Name=Msa0168050
chr1_4 mRNA 50315354 50318649 50315354 ID=Msa0168050-mRNA-1;Parent=Msa0168050;Name=Msa0168050-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95|1|1|1|0.85|0.87|8|297|608
chr1_4 exon 50315354 50315777 50315354 ID=Msa0168050-mRNA-1:exon:14820;Parent=Msa0168050-mRNA-1
chr1_4 exon 50315945 50316064 50315945 ID=Msa0168050-mRNA-1:exon:14821;Parent=Msa0168050-mRNA-1
chr1_4 exon 50316157 50316391 50316157 ID=Msa0168050-mRNA-1:exon:14822;Parent=Msa0168050-mRNA-1
chr1_4 exon 50316923 50317714 50316923 ID=Msa0168050-mRNA-1:exon:14823;Parent=Msa0168050-mRNA-1
chr1_4 exon 50317807 50318008 50317807 ID=Msa0168050-mRNA-1:exon:14824;Parent=Msa0168050-mRNA-1
chr1_4 exon 50318086 50318176 50318086 ID=Msa0168050-mRNA-1:exon:14825;Parent=Msa0168050-mRNA-1
chr1_4 exon 50318272 50318329 50318272 ID=Msa0168050-mRNA-1:exon:14826;Parent=Msa0168050-mRNA-1
chr1_4 exon 50318353 50318649 50318353 ID=Msa0168050-mRNA-1:exon:14827;Parent=Msa0168050-mRNA-1
chr1_4 five_prime_UTR 50315354 50315448 50315354 ID=Msa0168050-mRNA-1:five_prime_utr;Parent=Msa0168050-mRNA-1
chr1_4 CDS 50315449 50315777 50315449 ID=Msa0168050-mRNA-1:cds;Parent=Msa0168050-mRNA-1
chr1_4 CDS 50315945 50316064 50315945 ID=Msa0168050-mRNA-1:cds;Parent=Msa0168050-mRNA-1
chr1_4 CDS 50316157 50316391 50316157 ID=Msa0168050-mRNA-1:cds;Parent=Msa0168050-mRNA-1
chr1_4 CDS 50316923 50317714 50316923 ID=Msa0168050-mRNA-1:cds;Parent=Msa0168050-mRNA-1
chr1_4 CDS 50317807 50318008 50317807 ID=Msa0168050-mRNA-1:cds;Parent=Msa0168050-mRNA-1
chr1_4 CDS 50318086 50318176 50318086 ID=Msa0168050-mRNA-1:cds;Parent=Msa0168050-mRNA-1
chr1_4 CDS 50318272 50318329 50318272 ID=Msa0168050-mRNA-1:cds;Parent=Msa0168050-mRNA-1
chr1_4 three_prime_UTR 50318353 50318649 50318353 ID=Msa0168050-mRNA-1:three_prime_utr;Parent=Msa0168050-mRNA-1
Gene Sequence

>Msa0168050

ATGAAAACTTCTTCAGAAACTCCTTCACAATCCTCACACAACACCAGATCCAAAAAACCCAATCTTCGTAGCTCAAAATCTTTATTCAAAGATCCAATTGAACTAACCTCAAAAACCCCAGAAAAATCACTGGAGAAGCCACCACCGATGCGAACCCGCAACCGCGGCGTTGCGCTTTCGATATCGGATATTAGAAAAGTTGCTAAGGGTCTTCAAGATCAGAAAAAACAAAGCAATGAAATGACGTCGTTGAAGGGAAAATCTGCTAGAAGGCAAATCACATTGGCTTCTCCTCGGAAGAGCAATGAATCATCTAATCTTCCTGAAAAGTATGAGAATTTGGGGGAGTTTTTTGATAGCTTGGATAGTTCGATTAGATTGTTGCGATTAAAAGGATCGATGACGTCGTTTAATAATATCAGACCAAAGATTGAAACTTTAACTGATAGGAGGTTTACCCATGCTCATTTGGCACAGTTGAAGTTTATTTTACCTGAGGCGATTGCTATTAAGAAGTTGTTGGTGTTCGATGAGCGAACGAGTTGTATGAAGCCGGATCTTCATGTTAGTATAAACCCTGATGCAGTTGAGTTTGATGCTAAGTTGTTGTCTGAATCTGGGACTATGTCTCTGAGGAAGTTGTTTCGTGCGCGACTCAATGAGTTTTGGAAATCCCACCCAGAGGCTGATGAAGTTCCAGAGGAAATGCTGCCTGAGCCATTCAGTCGTCCAAAGCATGATCCTCTTGTACACATGATGAAACCTCCCTCATCATTCTCTGCAGTGAAATTATCTGTTGCACGTGCTTCTAGTGACATTGTGGATAATACAGACCCTGCTAACTCAGAAAGTCATGTGTCAATGCCCGCTGAGACATCAGTTGAAGCTCTTAACCAGAAGCCGGCAGTTGCCTCTCATATGCCTCAATCTTTCAGAAGGCGGTTTTCTCAAAAATTAAAGGAAAATGTACAGCCACTTCAATCTGATTCATTCAAACCCTCAGTTGTGCCCGTTTCAGAGTCAAGTTTGAGGATAAATTCCACCTCTGAGGTCCCTAAAATATCCCCATCCGAGTTGGTTACAGAATCATCCGGTAGTGAAGCTCATCCTGCGATTCATGGTTCTTCAGACTGCTTCACACCATCCAGAGTTACACTAGCTACACCTAGCAAAACCATTGAGTATACAGAAAGCAAAGATGGGTCCTTCAAAACCGTTGATGCTATGTCAACTCCAGCTAAATTTGTATCTACTCCAGCCAGGCTGATGTCAGCTACACCTGCATTGAAGCCACCTAAAAGAAGTTTTATGACCCCAGACGACAACTCTACCAGCTCGCCGGACAAGTTGGTTAAGCGCCCACCTCGTTCAAGGTCATTGAAATTTGACACTCCTATGAAAAATGAAAATGATGCTGGCGGTTTGTCAATTGATGATGACATTTTTGATATCCTCCCGGATAATCTTCTCCATTCGATTCAGGAAAAAGAAAGAATAGCAATGGAGGAAAGGGATCCAGCTATCTCACAAGCTAAGAAGCGGAAGAAAATTATTGCCAGCCTCCCTAAGCTCTTTAACATGATTCACATGATGTTTCATTCAATAAACCGTTCTGTTATCACAAAAGAGGAGCTGATGAGCAAGATAATCTCAAGCCACCGTGATATTGTTGATAGAAGTGAAGTTGAAGAACAGTTGCATTTGTTGTTAGAATTAGTTCCCGAATGGATTTCTGAGAAGGCGGCCTCCAGTGGAGATATGCTAGTCTCCGTAAACAAAATGTTGAACCCTGAATCCTTAAGAGCATCACTTGAAGAAGCAAAATGA

Protein sequence

>Msa0168050

MKTSSETPSQSSHNTRSKKPNLRSSKSLFKDPIELTSKTPEKSLEKPPPMRTRNRGVALSISDIRKVAKGLQDQKKQSNEMTSLKGKSARRQITLASPRKSNESSNLPEKYENLGEFFDSLDSSIRLLRLKGSMTSFNNIRPKIETLTDRRFTHAHLAQLKFILPEAIAIKKLLVFDERTSCMKPDLHVSINPDAVEFDAKLLSESGTMSLRKLFRARLNEFWKSHPEADEVPEEMLPEPFSRPKHDPLVHMMKPPSSFSAVKLSVARASSDIVDNTDPANSESHVSMPAETSVEALNQKPAVASHMPQSFRRRFSQKLKENVQPLQSDSFKPSVVPVSESSLRINSTSEVPKISPSELVTESSGSEAHPAIHGSSDCFTPSRVTLATPSKTIEYTESKDGSFKTVDAMSTPAKFVSTPARLMSATPALKPPKRSFMTPDDNSTSSPDKLVKRPPRSRSLKFDTPMKNENDAGGLSIDDDIFDILPDNLLHSIQEKERIAMEERDPAISQAKKRKKIIASLPKLFNMIHMMFHSINRSVITKEELMSKIISSHRDIVDRSEVEEQLHLLLELVPEWISEKAASSGDMLVSVNKMLNPESLRASLEEAK*