AlfalfaGEDB | Msa0379080

M. sativa cultivar zhongmu-4 / Msa0379080

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016592 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379080	XP_003602800.2	98.324	179	3	0	1	179	1	179	5.42e-126	362

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379080	sp\|Q9FMV4\|MED30_ARATH	53.714	175	70	2	16	179	15	189	1.95e-52	168

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379080	G7J3V6	98.324	179	3	0	1	179	1	179	2.59e-126	362

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0008090	Msa0379080	0.806598	7.611461e-50	-8.615850e-47
Msa0029260	Msa0379080	0.811649	6.297909e-51	-8.615850e-47
Msa0057710	Msa0379080	0.807479	4.953972e-50	-8.615850e-47
Msa0060770	Msa0379080	0.821197	4.588989e-53	-8.615850e-47
Msa0061080	Msa0379080	0.809956	1.464558e-50	-8.615850e-47
Msa0111330	Msa0379080	0.800006	1.764106e-48	-8.615850e-47
Msa0127310	Msa0379080	0.800743	1.249180e-48	-8.615850e-47
Msa0144540	Msa0379080	0.811351	7.311856e-51	-8.615850e-47
Msa0167480	Msa0379080	0.800706	1.270806e-48	-8.615850e-47
Msa0169300	Msa0379080	0.808369	3.204483e-50	-8.615850e-47
Msa0199690	Msa0379080	0.824278	8.803509e-54	-8.615850e-47
Msa0199880	Msa0379080	0.806336	8.642898e-50	-8.615850e-47
Msa0226330	Msa0379080	0.822103	2.833572e-53	-8.615850e-47
Msa0236270	Msa0379080	0.811228	7.777367e-51	-8.615850e-47
Msa0366890	Msa0379080	0.815065	1.118797e-51	-8.615850e-47
Msa0376300	Msa0379080	0.807143	5.836833e-50	-8.615850e-47
Msa0379080	Msa0414800	0.825269	5.138959e-54	-8.615850e-47
Msa0379080	Msa0458060	0.837491	5.037786e-57	-8.615850e-47
Msa0379080	Msa0471590	0.811624	6.377841e-51	-8.615850e-47
Msa0379080	Msa0508590	0.807875	4.082258e-50	-8.615850e-47
Msa0379080	Msa0581130	0.800270	1.559066e-48	-8.615850e-47
Msa0379080	Msa0610390	0.831761	1.389572e-55	-8.615850e-47
Msa0379080	Msa0627910	0.801740	7.806237e-49	-8.615850e-47
Msa0379080	Msa0650920	0.833580	4.915501e-56	-8.615850e-47
Msa0379080	Msa0677290	0.810787	9.690053e-51	-8.615850e-47
Msa0379080	Msa0689500	0.808517	2.978847e-50	-8.615850e-47
Msa0379080	Msa0692840	0.835318	1.798865e-56	-8.615850e-47
Msa0379080	Msa0692940	0.846587	1.978069e-59	-8.615850e-47
Msa0379080	Msa0709500	0.807594	4.683523e-50	-8.615850e-47
Msa0379080	Msa0722020	0.819737	9.923532e-53	-8.615850e-47
Msa0379080	Msa0763020	0.809405	1.923515e-50	-8.615850e-47
Msa0379080	Msa0763070	0.806216	9.162331e-50	-8.615850e-47
Msa0379080	Msa0790850	0.805454	1.324467e-49	-8.615850e-47
Msa0379080	Msa0805500	0.807604	4.661420e-50	-8.615850e-47
Msa0379080	Msa0823090	0.811603	6.446570e-51	-8.615850e-47
Msa0379080	Msa0826500	0.811290	7.537462e-51	-8.615850e-47
Msa0379080	Msa0847080	0.836599	8.512572e-57	-8.615850e-47
Msa0379080	Msa0902760	0.806410	8.337804e-50	-8.615850e-47
Msa0379080	Msa0926460	0.819085	1.397274e-52	-8.615850e-47
Msa0379080	Msa0965860	0.824064	9.880804e-54	-8.615850e-47
Msa0379080	Msa1000690	0.808175	3.523371e-50	-8.615850e-47
Msa0379080	Msa1013400	0.805205	1.493790e-49	-8.615850e-47
Msa0379080	Msa1019260	0.802836	4.644191e-49	-8.615850e-47
Msa0379080	Msa1040400	0.804728	1.879104e-49	-8.615850e-47
Msa0379080	Msa1055410	0.802692	4.971676e-49	-8.615850e-47
Msa0379080	Msa1093530	0.808268	3.366936e-50	-8.615850e-47
Msa0379080	Msa1104210	0.804211	2.408497e-49	-8.615850e-47
Msa0379080	Msa1126510	0.802710	4.929237e-49	-8.615850e-47
Msa0379080	Msa1165960	0.801119	1.046297e-48	-8.615850e-47
Msa0379080	Msa1171360	0.805753	1.146573e-49	-8.615850e-47
Msa0379080	Msa1171870	0.802266	6.085631e-49	-8.615850e-47
Msa0379080	Msa1185170	0.807530	4.832397e-50	-8.615850e-47
Msa0379080	Msa1202580	0.805829	1.104928e-49	-8.615850e-47
Msa0379080	Msa1204250	0.811759	5.960805e-51	-8.615850e-47
Msa0379080	Msa1242920	-0.800275	1.555433e-48	-8.615850e-47
Msa0379080	Msa1255040	-0.809317	2.008761e-50	-8.615850e-47
Msa0379080	Msa1269300	0.800084	1.701344e-48	-8.615850e-47
Msa0379080	Msa1295110	0.811541	6.649057e-51	-8.615850e-47
Msa0379080	Msa1295490	-0.803652	3.147492e-49	-8.615850e-47
Msa0379080	Msa1306430	0.800047	1.730984e-48	-8.615850e-47
Msa0379080	Msa1333110	0.810486	1.125617e-50	-8.615850e-47
Msa0379080	Msa1341070	0.811200	7.885740e-51	-8.615850e-47
Msa0379080	Msa1367590	0.808976	2.377148e-50	-8.615850e-47
Msa0379080	Msa1368210	0.801590	8.379870e-49	-8.615850e-47
Msa0379080	Msa1397940	0.812540	4.026432e-51	-8.615850e-47
Msa0379080	Msa1403800	0.808552	2.929000e-50	-8.615850e-47
Msa0242230	Msa0379080	0.821112	4.800662e-53	-8.615850e-47
Msa0255080	Msa0379080	0.811352	7.307832e-51	-8.615850e-47
Msa0259370	Msa0379080	0.802794	4.737114e-49	-8.615850e-47
Msa0300120	Msa0379080	0.805618	1.223768e-49	-8.615850e-47
Msa0304590	Msa0379080	0.806463	8.126458e-50	-8.615850e-47
Msa0304660	Msa0379080	0.803787	2.951150e-49	-8.615850e-47
Msa0331700	Msa0379080	0.801683	8.019055e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379080	MtrunA17_Chr3g0132131	98.324	179	3	0	1	179	1	179	4.98e-130	362

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379080	AT5G63480.2	54.237	177	70	2	14	179	2	178	6.79e-55	172
Msa0379080	AT5G63480.1	53.714	175	70	2	16	179	15	189	1.98e-53	168

Find 60 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCATAAGATAAATAAATTT+TGG	0.116963	3_1:-79972920	None:intergenic
AGTTGTCATTGTGCCGTTTA+TGG	0.154588	3_1:+79972877	None:intergenic
AACTATTTAGGTGCAATTTC+TGG	0.176370	3_1:+79970620	None:intergenic
AATTGTACCTTCTGAGAATT+AGG	0.234740	3_1:+79972554	None:intergenic
CATTACCATTTAATGTAATC+TGG	0.303017	3_1:+79970872	None:intergenic
GTGATCCAGATTACATTAAA+TGG	0.304124	3_1:-79970877	Msa0379080:three_prime_UTR
CGACTCTGAAATTGTAGTTT+CGG	0.321655	3_1:+79970791	None:intergenic
TACCAACTTCAGGTCGAAAA+AGG	0.322418	3_1:+79970937	None:intergenic
GACTCTGAAATTGTAGTTTC+GGG	0.330303	3_1:+79970792	None:intergenic
ATTGCAGAGTTCGTCGTTCA+TGG	0.333948	3_1:+79972775	None:intergenic
AACTCAAGAGAAAACTATTT+AGG	0.345496	3_1:+79970608	None:intergenic
GACGCTAATTCCGAGAATTC+TGG	0.358713	3_1:-79972689	Msa0379080:CDS
TAAGTATTTGTGACCTTCAA+TGG	0.361559	3_1:+79972835	None:intergenic
AGGTATAAGAATGCTGTTGC+TGG	0.378694	3_1:-79972602	Msa0379080:CDS
AGTTTGAACATGTTTGTCAT+AGG	0.379906	3_1:-79970745	Msa0379080:three_prime_UTR
TTGGTAGTGCCTGCATTTGT+AGG	0.383629	3_1:-79970920	Msa0379080:three_prime_UTR
ACAACTGATTCAACTTCAAT+TGG	0.393071	3_1:+79970831	None:intergenic
GCAAGCATCTTCTTTAAGAA+AGG	0.401643	3_1:-79971354	Msa0379080:intron
TCAATTTCAGCTTCATCCAT+TGG	0.420492	3_1:+79971389	None:intergenic
CCCAATGCTCCTTCTTCAAA+CGG	0.425690	3_1:-79972713	Msa0379080:CDS
TATCTTGAAAGCGTGTTGTA+TGG	0.442305	3_1:+79972805	None:intergenic
CATCCATAAATGTAGGAACT+TGG	0.446438	3_1:-79971036	Msa0379080:intron
TGAAGCTGAAATTGAGAAGT+TGG	0.447886	3_1:-79971381	Msa0379080:CDS
GCGCCACCAGCACCACCACT+AGG	0.452841	3_1:+79972644	None:intergenic
AGCGTGTTGGCCAGAATTCT+CGG	0.456929	3_1:+79972679	None:intergenic
ATGCAGGCACTACCAACTTC+AGG	0.460035	3_1:+79970927	None:intergenic
TGAAGTTGAATCAGTTGTCT+TGG	0.462462	3_1:-79970826	Msa0379080:three_prime_UTR
CCGTTTGAAGAAGGAGCATT+GGG	0.462635	3_1:+79972713	None:intergenic
ATCAAATTATCAGCAAAGAT+TGG	0.466655	3_1:+79970674	None:intergenic
ACACAAGATTTAGCCATTGA+AGG	0.472800	3_1:-79972848	Msa0379080:CDS
GTTGATCTATGAGTATCTTC+AGG	0.477111	3_1:+79970998	None:intergenic
CGCCACCAGCACCACCACTA+GGG	0.477291	3_1:+79972645	None:intergenic
ACGAACTCTGCAATCCCGTT+TGG	0.478608	3_1:-79972766	Msa0379080:CDS
GTTTGAACATGTTTGTCATA+GGG	0.486436	3_1:-79970744	Msa0379080:three_prime_UTR
ATGGAAGAACAATCCATAAA+CGG	0.489902	3_1:-79972890	Msa0379080:CDS
CTCTTGATGAAGCTCGTTTG+AGG	0.490137	3_1:-79972622	Msa0379080:CDS
ACCGTTTGAAGAAGGAGCAT+TGG	0.500106	3_1:+79972712	None:intergenic
TTATATCACCCTACAAATGC+AGG	0.500305	3_1:+79970911	None:intergenic
AACTCTGCAATCCCGTTTGG+TGG	0.517056	3_1:-79972763	Msa0379080:CDS
TTAGCGTCACCGTTTGAAGA+AGG	0.518690	3_1:+79972704	None:intergenic
GCTGCCCCTAGTGGTGGTGC+TGG	0.521652	3_1:-79972650	Msa0379080:CDS
AGTAGCAGAGGAAGGAGAAG+TGG	0.523660	3_1:+79972739	None:intergenic
GGAGAAGTGGACCACCAAAC+GGG	0.531940	3_1:+79972752	None:intergenic
AGGAGAAGTGGACCACCAAA+CGG	0.532180	3_1:+79972751	None:intergenic
TGAATTGCACAAATTGCTAC+TGG	0.549226	3_1:+79970531	None:intergenic
GCCCCTAGTGGTGGTGCTGG+TGG	0.550994	3_1:-79972647	Msa0379080:CDS
GGGCAGCGCCGTCAGCGTGT+TGG	0.551035	3_1:+79972666	None:intergenic
TGGTAGTGCCTGCATTTGTA+GGG	0.563107	3_1:-79970919	Msa0379080:three_prime_UTR
TGCTATTCCTAATTCTCAGA+AGG	0.565787	3_1:-79972561	Msa0379080:intron
GACGGCGCTGCCCCTAGTGG+TGG	0.580667	3_1:-79972656	Msa0379080:CDS
AAACTACAATTTCAGAGTCG+TGG	0.584797	3_1:-79970788	Msa0379080:three_prime_UTR
ACAATTTCAGAGTCGTGGAA+TGG	0.600571	3_1:-79970783	Msa0379080:three_prime_UTR
GCCACCAGCACCACCACTAG+GGG	0.600816	3_1:+79972646	None:intergenic
CGGTTCAGCTGATAGTCCAA+TGG	0.601419	3_1:-79971405	Msa0379080:CDS
TTGGGAGAAGTAGCAGAGGA+AGG	0.604165	3_1:+79972731	None:intergenic
AATTCTGGCCAACACGCTGA+CGG	0.604762	3_1:-79972674	Msa0379080:CDS
AGCATTGGGAGAAGTAGCAG+AGG	0.617128	3_1:+79972727	None:intergenic
GCTGACGGCGCTGCCCCTAG+TGG	0.643304	3_1:-79972659	Msa0379080:CDS
TAGGCAAACACATTTGACAG+CGG	0.710916	3_1:-79971425	Msa0379080:CDS
TTATCACTGATATATCAACA+TGG	0.732166	3_1:-79970966	Msa0379080:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTGTAATTATTGATAAAAAT+TGG	-	chr3_1:79971061-79971080	Msa0379080:intron	10.0%
!!	TTGTAATTATTGATAAAAAT+TGG	-	chr3_1:79971061-79971080	Msa0379080:intron	10.0%
!!!	TTTTTGAATCATTGAACTTT+AGG	-	chr3_1:79970974-79970993	Msa0379080:CDS	20.0%
!!!	GAATTTTGTGATATGTTTTA+AGG	-	chr3_1:79971211-79971230	Msa0379080:intron	20.0%
!!	ATTTAGTAATAGTATATCAC+AGG	-	chr3_1:79971249-79971268	Msa0379080:intron	20.0%
!!	CATTATAAGGTTCTATAAAT+AGG	+	chr3_1:79971447-79971466	None:intergenic	20.0%
!!	CATTACATTAGCTAAAAATT+CGG	+	chr3_1:79971595-79971614	None:intergenic	20.0%
!!	TAATATAAACATAGTGAGTT+CGG	+	chr3_1:79971784-79971803	None:intergenic	20.0%
!!	TGAGACTAAAATAATAACTT+CGG	+	chr3_1:79972173-79972192	None:intergenic	20.0%
!!!	ATTATATTGTTGTTAAGCAT+TGG	-	chr3_1:79972379-79972398	Msa0379080:intron	20.0%
!!!	TTTTTGAATCATTGAACTTT+AGG	-	chr3_1:79970974-79970993	Msa0379080:CDS	20.0%
!!!	GAATTTTGTGATATGTTTTA+AGG	-	chr3_1:79971211-79971230	Msa0379080:intron	20.0%
!!	ATTTAGTAATAGTATATCAC+AGG	-	chr3_1:79971249-79971268	Msa0379080:intron	20.0%
!!	CATTATAAGGTTCTATAAAT+AGG	+	chr3_1:79971447-79971466	None:intergenic	20.0%
!!	CATTACATTAGCTAAAAATT+CGG	+	chr3_1:79971595-79971614	None:intergenic	20.0%
!!	TAATATAAACATAGTGAGTT+CGG	+	chr3_1:79971784-79971803	None:intergenic	20.0%
!!	TGAGACTAAAATAATAACTT+CGG	+	chr3_1:79972173-79972192	None:intergenic	20.0%
!!!	ATTATATTGTTGTTAAGCAT+TGG	-	chr3_1:79972379-79972398	Msa0379080:intron	20.0%
!	AAACTCGAATTAGAAAAGTA+GGG	+	chr3_1:79970922-79970941	None:intergenic	25.0%
!	AAAACTCGAATTAGAAAAGT+AGG	+	chr3_1:79970923-79970942	None:intergenic	25.0%
!!!	TGTTCTTTTTTTACTAGATC+TGG	-	chr3_1:79970949-79970968	Msa0379080:CDS	25.0%
!	AAAAAAATACCATCATGTAG+GGG	+	chr3_1:79971330-79971349	None:intergenic	25.0%
!	GAAAAAAATACCATCATGTA+GGG	+	chr3_1:79971331-79971350	None:intergenic	25.0%
!	AGAAAAAAATACCATCATGT+AGG	+	chr3_1:79971332-79971351	None:intergenic	25.0%
!!!	TTTTTTTCTACATATGCACA+AGG	-	chr3_1:79971343-79971362	Msa0379080:intron	25.0%
!!!	TTTTTTCTACATATGCACAA+GGG	-	chr3_1:79971344-79971363	Msa0379080:intron	25.0%
!	AAAAGAAAACTTCATTCGTT+AGG	+	chr3_1:79971498-79971517	None:intergenic	25.0%
!!!	GTTTGTTGTCTTTTCAAAAT+GGG	-	chr3_1:79971694-79971713	Msa0379080:intron	25.0%
!!!	TTTGTTGTCTTTTCAAAATG+GGG	-	chr3_1:79971695-79971714	Msa0379080:intron	25.0%
!	TCCATATTCTGTTAAATGAT+TGG	-	chr3_1:79971895-79971914	Msa0379080:intron	25.0%
!	CCATATTCTGTTAAATGATT+GGG	-	chr3_1:79971896-79971915	Msa0379080:intron	25.0%
!	CATATTCTGTTAAATGATTG+GGG	-	chr3_1:79971897-79971916	Msa0379080:intron	25.0%
!!!	ACTAACTTGGTTTGTATTAT+AGG	-	chr3_1:79972000-79972019	Msa0379080:intron	25.0%
!!!	AAATAATAACTTCGGTGTTT+CGG	+	chr3_1:79972165-79972184	None:intergenic	25.0%
!!!	AGTCTCAAGTTTTAATTCAT+CGG	-	chr3_1:79972186-79972205	Msa0379080:intron	25.0%
!	TTATCACTGATATATCAACA+TGG	-	chr3_1:79972478-79972497	Msa0379080:intron	25.0%
!	CATTACCATTTAATGTAATC+TGG	+	chr3_1:79972575-79972594	None:intergenic	25.0%
!	ATCAAATTATCAGCAAAGAT+TGG	+	chr3_1:79972773-79972792	None:intergenic	25.0%
!	AACTCAAGAGAAAACTATTT+AGG	+	chr3_1:79972839-79972858	None:intergenic	25.0%
!	AAACTCGAATTAGAAAAGTA+GGG	+	chr3_1:79970922-79970941	None:intergenic	25.0%
!	AAAACTCGAATTAGAAAAGT+AGG	+	chr3_1:79970923-79970942	None:intergenic	25.0%
!!!	TGTTCTTTTTTTACTAGATC+TGG	-	chr3_1:79970949-79970968	Msa0379080:CDS	25.0%
!	AAAAAAATACCATCATGTAG+GGG	+	chr3_1:79971330-79971349	None:intergenic	25.0%
!	GAAAAAAATACCATCATGTA+GGG	+	chr3_1:79971331-79971350	None:intergenic	25.0%
!	AGAAAAAAATACCATCATGT+AGG	+	chr3_1:79971332-79971351	None:intergenic	25.0%
!!!	TTTTTTTCTACATATGCACA+AGG	-	chr3_1:79971343-79971362	Msa0379080:intron	25.0%
!!!	TTTTTTCTACATATGCACAA+GGG	-	chr3_1:79971344-79971363	Msa0379080:intron	25.0%
!	AAAAGAAAACTTCATTCGTT+AGG	+	chr3_1:79971498-79971517	None:intergenic	25.0%
!!!	GTTTGTTGTCTTTTCAAAAT+GGG	-	chr3_1:79971694-79971713	Msa0379080:intron	25.0%
!!!	TTTGTTGTCTTTTCAAAATG+GGG	-	chr3_1:79971695-79971714	Msa0379080:intron	25.0%
!	TCCATATTCTGTTAAATGAT+TGG	-	chr3_1:79971895-79971914	Msa0379080:intron	25.0%
!	CCATATTCTGTTAAATGATT+GGG	-	chr3_1:79971896-79971915	Msa0379080:intron	25.0%
!	CATATTCTGTTAAATGATTG+GGG	-	chr3_1:79971897-79971916	Msa0379080:intron	25.0%
!!!	ACTAACTTGGTTTGTATTAT+AGG	-	chr3_1:79972000-79972019	Msa0379080:intron	25.0%
!!!	AAATAATAACTTCGGTGTTT+CGG	+	chr3_1:79972165-79972184	None:intergenic	25.0%
!!!	AGTCTCAAGTTTTAATTCAT+CGG	-	chr3_1:79972186-79972205	Msa0379080:intron	25.0%
!	TTATCACTGATATATCAACA+TGG	-	chr3_1:79972478-79972497	Msa0379080:intron	25.0%
!	CATTACCATTTAATGTAATC+TGG	+	chr3_1:79972575-79972594	None:intergenic	25.0%
!	ATCAAATTATCAGCAAAGAT+TGG	+	chr3_1:79972773-79972792	None:intergenic	25.0%
!	AACTCAAGAGAAAACTATTT+AGG	+	chr3_1:79972839-79972858	None:intergenic	25.0%
	ATGGAAGAACAATCCATAAA+CGG	-	chr3_1:79970554-79970573	Msa0379080:three_prime_UTR	30.0%
	TAAGTATTTGTGACCTTCAA+TGG	+	chr3_1:79970612-79970631	None:intergenic	30.0%
!	AATTGTACCTTCTGAGAATT+AGG	+	chr3_1:79970893-79970912	None:intergenic	30.0%
!	ATCATTGAACTTTAGGTTAG+TGG	-	chr3_1:79970981-79971000	Msa0379080:CDS	30.0%
	ACTATTACTAAATCCTTCCT+GGG	+	chr3_1:79971242-79971261	None:intergenic	30.0%
	TACTATTACTAAATCCTTCC+TGG	+	chr3_1:79971243-79971262	None:intergenic	30.0%
	AATTCCTGTAGATATCTTTC+TGG	-	chr3_1:79971630-79971649	Msa0379080:intron	30.0%
	AAAAAAATCTCCTTACACCA+AGG	-	chr3_1:79971667-79971686	Msa0379080:intron	30.0%
!!!	GGTTTGTTGTCTTTTCAAAA+TGG	-	chr3_1:79971693-79971712	Msa0379080:intron	30.0%
	CCCAATCATTTAACAGAATA+TGG	+	chr3_1:79971899-79971918	None:intergenic	30.0%
!	GTTTTCCTGATAAACTAACT+TGG	-	chr3_1:79971987-79972006	Msa0379080:intron	30.0%
!	ACAAACCAAGTTAGTTTATC+AGG	+	chr3_1:79971995-79972014	None:intergenic	30.0%
!!	AATAATAACTTCGGTGTTTC+GGG	+	chr3_1:79972164-79972183	None:intergenic	30.0%
	AAGCCTGAAACAATTTCAAT+TGG	-	chr3_1:79972300-79972319	Msa0379080:intron	30.0%
	AGCCTGAAACAATTTCAATT+GGG	-	chr3_1:79972301-79972320	Msa0379080:intron	30.0%
	TTCCCAATTGAAATTGTTTC+AGG	+	chr3_1:79972306-79972325	None:intergenic	30.0%
	GAATTTCCATCCATAAATGT+AGG	-	chr3_1:79972401-79972420	Msa0379080:intron	30.0%
	GTGATCCAGATTACATTAAA+TGG	-	chr3_1:79972567-79972586	Msa0379080:CDS	30.0%
!	ACAACTGATTCAACTTCAAT+TGG	+	chr3_1:79972616-79972635	None:intergenic	30.0%
	AGTTTGAACATGTTTGTCAT+AGG	-	chr3_1:79972699-79972718	Msa0379080:CDS	30.0%
	GTTTGAACATGTTTGTCATA+GGG	-	chr3_1:79972700-79972719	Msa0379080:CDS	30.0%
	AACTATTTAGGTGCAATTTC+TGG	+	chr3_1:79972827-79972846	None:intergenic	30.0%
!	TTTTCTCTTGAGTTAGAGAA+AGG	-	chr3_1:79972845-79972864	Msa0379080:CDS	30.0%
	ATGGAAGAACAATCCATAAA+CGG	-	chr3_1:79970554-79970573	Msa0379080:three_prime_UTR	30.0%
	TAAGTATTTGTGACCTTCAA+TGG	+	chr3_1:79970612-79970631	None:intergenic	30.0%
!	AATTGTACCTTCTGAGAATT+AGG	+	chr3_1:79970893-79970912	None:intergenic	30.0%
!	ATCATTGAACTTTAGGTTAG+TGG	-	chr3_1:79970981-79971000	Msa0379080:CDS	30.0%
	ACTATTACTAAATCCTTCCT+GGG	+	chr3_1:79971242-79971261	None:intergenic	30.0%
	TACTATTACTAAATCCTTCC+TGG	+	chr3_1:79971243-79971262	None:intergenic	30.0%
	AATTCCTGTAGATATCTTTC+TGG	-	chr3_1:79971630-79971649	Msa0379080:intron	30.0%
	AAAAAAATCTCCTTACACCA+AGG	-	chr3_1:79971667-79971686	Msa0379080:intron	30.0%
!!!	GGTTTGTTGTCTTTTCAAAA+TGG	-	chr3_1:79971693-79971712	Msa0379080:intron	30.0%
	CCCAATCATTTAACAGAATA+TGG	+	chr3_1:79971899-79971918	None:intergenic	30.0%
!	GTTTTCCTGATAAACTAACT+TGG	-	chr3_1:79971987-79972006	Msa0379080:intron	30.0%
!	ACAAACCAAGTTAGTTTATC+AGG	+	chr3_1:79971995-79972014	None:intergenic	30.0%
!!	AATAATAACTTCGGTGTTTC+GGG	+	chr3_1:79972164-79972183	None:intergenic	30.0%
	AAGCCTGAAACAATTTCAAT+TGG	-	chr3_1:79972300-79972319	Msa0379080:intron	30.0%
	AGCCTGAAACAATTTCAATT+GGG	-	chr3_1:79972301-79972320	Msa0379080:intron	30.0%
	TTCCCAATTGAAATTGTTTC+AGG	+	chr3_1:79972306-79972325	None:intergenic	30.0%
	GAATTTCCATCCATAAATGT+AGG	-	chr3_1:79972401-79972420	Msa0379080:intron	30.0%
	GTGATCCAGATTACATTAAA+TGG	-	chr3_1:79972567-79972586	Msa0379080:CDS	30.0%
!	ACAACTGATTCAACTTCAAT+TGG	+	chr3_1:79972616-79972635	None:intergenic	30.0%
	AGTTTGAACATGTTTGTCAT+AGG	-	chr3_1:79972699-79972718	Msa0379080:CDS	30.0%
	GTTTGAACATGTTTGTCATA+GGG	-	chr3_1:79972700-79972719	Msa0379080:CDS	30.0%
	AACTATTTAGGTGCAATTTC+TGG	+	chr3_1:79972827-79972846	None:intergenic	30.0%
!	TTTTCTCTTGAGTTAGAGAA+AGG	-	chr3_1:79972845-79972864	Msa0379080:CDS	30.0%
	ACACAAGATTTAGCCATTGA+AGG	-	chr3_1:79970596-79970615	Msa0379080:three_prime_UTR	35.0%
!	TATCTTGAAAGCGTGTTGTA+TGG	+	chr3_1:79970642-79970661	None:intergenic	35.0%
	TGCTATTCCTAATTCTCAGA+AGG	-	chr3_1:79970883-79970902	Msa0379080:three_prime_UTR	35.0%
	GGAATGAACTTGCAAAACTA+AGG	-	chr3_1:79971025-79971044	Msa0379080:intron	35.0%
	TGGAAATTCGTAAATCACAC+AGG	-	chr3_1:79971081-79971100	Msa0379080:intron	35.0%
	TAAGTTCATAACTCTCCTAC+TGG	-	chr3_1:79971165-79971184	Msa0379080:intron	35.0%
!!!	TATGTTTTAAGGTCTTTCCC+AGG	-	chr3_1:79971222-79971241	Msa0379080:intron	35.0%
	TCACGTGTTAAACTTATCTG+TGG	+	chr3_1:79971383-79971402	None:intergenic	35.0%
	AAAGACAACAAACCAAACCT+TGG	+	chr3_1:79971687-79971706	None:intergenic	35.0%
!	TGTAGCTCTATTATACTGCT+AGG	-	chr3_1:79971805-79971824	Msa0379080:intron	35.0%
	TGGAGTCTTAAGTCTATGTA+AGG	+	chr3_1:79971879-79971898	None:intergenic	35.0%
	AGCTTTGCTAGCTAATATGA+TGG	+	chr3_1:79971964-79971983	None:intergenic	35.0%
	TCAATTTCAGCTTCATCCAT+TGG	+	chr3_1:79972058-79972077	None:intergenic	35.0%
	TGAAGCTGAAATTGAGAAGT+TGG	-	chr3_1:79972063-79972082	Msa0379080:intron	35.0%
!	GCAAGCATCTTCTTTAAGAA+AGG	-	chr3_1:79972090-79972109	Msa0379080:intron	35.0%
!	GTTTGTAAAGAGTGTGATCA+AGG	+	chr3_1:79972142-79972161	None:intergenic	35.0%
	TTTCAATTGGGAAAAGCTTG+TGG	-	chr3_1:79972313-79972332	Msa0379080:intron	35.0%
	CAAGTTCCTACATTTATGGA+TGG	+	chr3_1:79972410-79972429	None:intergenic	35.0%
	CATCCATAAATGTAGGAACT+TGG	-	chr3_1:79972408-79972427	Msa0379080:intron	35.0%
	TTGCCAAGTTCCTACATTTA+TGG	+	chr3_1:79972414-79972433	None:intergenic	35.0%
	GTTGATCTATGAGTATCTTC+AGG	+	chr3_1:79972449-79972468	None:intergenic	35.0%
	TTATATCACCCTACAAATGC+AGG	+	chr3_1:79972536-79972555	None:intergenic	35.0%
	TGAAGTTGAATCAGTTGTCT+TGG	-	chr3_1:79972618-79972637	Msa0379080:CDS	35.0%
!!	GACTCTGAAATTGTAGTTTC+GGG	+	chr3_1:79972655-79972674	None:intergenic	35.0%
!!	CGACTCTGAAATTGTAGTTT+CGG	+	chr3_1:79972656-79972675	None:intergenic	35.0%
	AAACTACAATTTCAGAGTCG+TGG	-	chr3_1:79972656-79972675	Msa0379080:CDS	35.0%
	ACACAAGATTTAGCCATTGA+AGG	-	chr3_1:79970596-79970615	Msa0379080:three_prime_UTR	35.0%
!	TATCTTGAAAGCGTGTTGTA+TGG	+	chr3_1:79970642-79970661	None:intergenic	35.0%
	TGCTATTCCTAATTCTCAGA+AGG	-	chr3_1:79970883-79970902	Msa0379080:three_prime_UTR	35.0%
	GGAATGAACTTGCAAAACTA+AGG	-	chr3_1:79971025-79971044	Msa0379080:intron	35.0%
	TGGAAATTCGTAAATCACAC+AGG	-	chr3_1:79971081-79971100	Msa0379080:intron	35.0%
	TAAGTTCATAACTCTCCTAC+TGG	-	chr3_1:79971165-79971184	Msa0379080:intron	35.0%
!!!	TATGTTTTAAGGTCTTTCCC+AGG	-	chr3_1:79971222-79971241	Msa0379080:intron	35.0%
	TCACGTGTTAAACTTATCTG+TGG	+	chr3_1:79971383-79971402	None:intergenic	35.0%
	AAAGACAACAAACCAAACCT+TGG	+	chr3_1:79971687-79971706	None:intergenic	35.0%
!	TGTAGCTCTATTATACTGCT+AGG	-	chr3_1:79971805-79971824	Msa0379080:intron	35.0%
	TGGAGTCTTAAGTCTATGTA+AGG	+	chr3_1:79971879-79971898	None:intergenic	35.0%
	AGCTTTGCTAGCTAATATGA+TGG	+	chr3_1:79971964-79971983	None:intergenic	35.0%
	TCAATTTCAGCTTCATCCAT+TGG	+	chr3_1:79972058-79972077	None:intergenic	35.0%
	TGAAGCTGAAATTGAGAAGT+TGG	-	chr3_1:79972063-79972082	Msa0379080:intron	35.0%
!	GCAAGCATCTTCTTTAAGAA+AGG	-	chr3_1:79972090-79972109	Msa0379080:intron	35.0%
!	GTTTGTAAAGAGTGTGATCA+AGG	+	chr3_1:79972142-79972161	None:intergenic	35.0%
	TTTCAATTGGGAAAAGCTTG+TGG	-	chr3_1:79972313-79972332	Msa0379080:intron	35.0%
	CAAGTTCCTACATTTATGGA+TGG	+	chr3_1:79972410-79972429	None:intergenic	35.0%
	CATCCATAAATGTAGGAACT+TGG	-	chr3_1:79972408-79972427	Msa0379080:intron	35.0%
	TTGCCAAGTTCCTACATTTA+TGG	+	chr3_1:79972414-79972433	None:intergenic	35.0%
	GTTGATCTATGAGTATCTTC+AGG	+	chr3_1:79972449-79972468	None:intergenic	35.0%
	TTATATCACCCTACAAATGC+AGG	+	chr3_1:79972536-79972555	None:intergenic	35.0%
	TGAAGTTGAATCAGTTGTCT+TGG	-	chr3_1:79972618-79972637	Msa0379080:CDS	35.0%
!!	GACTCTGAAATTGTAGTTTC+GGG	+	chr3_1:79972655-79972674	None:intergenic	35.0%
!!	CGACTCTGAAATTGTAGTTT+CGG	+	chr3_1:79972656-79972675	None:intergenic	35.0%
	AAACTACAATTTCAGAGTCG+TGG	-	chr3_1:79972656-79972675	Msa0379080:CDS	35.0%
!!	AGTTGTCATTGTGCCGTTTA+TGG	+	chr3_1:79970570-79970589	None:intergenic	40.0%
	AGGTATAAGAATGCTGTTGC+TGG	-	chr3_1:79970842-79970861	Msa0379080:three_prime_UTR	40.0%
	AGGTTAGTGGAAATTCAACG+AGG	-	chr3_1:79970994-79971013	Msa0379080:CDS	40.0%
	AGTGGAAATTCAACGAGGTT+AGG	-	chr3_1:79970999-79971018	Msa0379080:CDS	40.0%
	GTGGAAATTCAACGAGGTTA+GGG	-	chr3_1:79971000-79971019	Msa0379080:CDS	40.0%
	AAATTCAACGAGGTTAGGGA+TGG	-	chr3_1:79971004-79971023	Msa0379080:CDS	40.0%
	GCAAAGAATATGCCAAAGCA+TGG	+	chr3_1:79971121-79971140	None:intergenic	40.0%
!	AAACTGACTCACAGCATCAA+TGG	+	chr3_1:79971143-79971162	None:intergenic	40.0%
!!!	TTTTAAGGTCTTTCCCAGGA+AGG	-	chr3_1:79971226-79971245	Msa0379080:intron	40.0%
!	AATGAAGTACCCCTACATGA+TGG	-	chr3_1:79971318-79971337	Msa0379080:intron	40.0%
!!	ATCGGTGCTGCAACATTATA+AGG	+	chr3_1:79971460-79971479	None:intergenic	40.0%
!!	TATAATGTTGCAGCACCGAT+TGG	-	chr3_1:79971460-79971479	Msa0379080:intron	40.0%
	CAAGCCAGAAAGATATCTAC+AGG	+	chr3_1:79971637-79971656	None:intergenic	40.0%
!!	CTGTAGATATCTTTCTGGCT+TGG	-	chr3_1:79971635-79971654	Msa0379080:intron	40.0%
	AATCTCCTTACACCAAGGTT+TGG	-	chr3_1:79971672-79971691	Msa0379080:intron	40.0%
!	ACAAACCAAACCTTGGTGTA+AGG	+	chr3_1:79971680-79971699	None:intergenic	40.0%
	TAGGCAAACACATTTGACAG+CGG	-	chr3_1:79972019-79972038	Msa0379080:intron	40.0%
	TACCAACTTCAGGTCGAAAA+AGG	+	chr3_1:79972510-79972529	None:intergenic	40.0%
	ACAATTTCAGAGTCGTGGAA+TGG	-	chr3_1:79972661-79972680	Msa0379080:CDS	40.0%
!	AGGTGTCTGTCTTTTGTACA+AGG	-	chr3_1:79972865-79972884	Msa0379080:CDS	40.0%
!!	AGTTGTCATTGTGCCGTTTA+TGG	+	chr3_1:79970570-79970589	None:intergenic	40.0%
	AGGTATAAGAATGCTGTTGC+TGG	-	chr3_1:79970842-79970861	Msa0379080:three_prime_UTR	40.0%
	AGGTTAGTGGAAATTCAACG+AGG	-	chr3_1:79970994-79971013	Msa0379080:CDS	40.0%
	AGTGGAAATTCAACGAGGTT+AGG	-	chr3_1:79970999-79971018	Msa0379080:CDS	40.0%
	GTGGAAATTCAACGAGGTTA+GGG	-	chr3_1:79971000-79971019	Msa0379080:CDS	40.0%
	AAATTCAACGAGGTTAGGGA+TGG	-	chr3_1:79971004-79971023	Msa0379080:CDS	40.0%
	GCAAAGAATATGCCAAAGCA+TGG	+	chr3_1:79971121-79971140	None:intergenic	40.0%
!	AAACTGACTCACAGCATCAA+TGG	+	chr3_1:79971143-79971162	None:intergenic	40.0%
!!!	TTTTAAGGTCTTTCCCAGGA+AGG	-	chr3_1:79971226-79971245	Msa0379080:intron	40.0%
!	AATGAAGTACCCCTACATGA+TGG	-	chr3_1:79971318-79971337	Msa0379080:intron	40.0%
!!	ATCGGTGCTGCAACATTATA+AGG	+	chr3_1:79971460-79971479	None:intergenic	40.0%
!!	TATAATGTTGCAGCACCGAT+TGG	-	chr3_1:79971460-79971479	Msa0379080:intron	40.0%
	CAAGCCAGAAAGATATCTAC+AGG	+	chr3_1:79971637-79971656	None:intergenic	40.0%
!!	CTGTAGATATCTTTCTGGCT+TGG	-	chr3_1:79971635-79971654	Msa0379080:intron	40.0%
	AATCTCCTTACACCAAGGTT+TGG	-	chr3_1:79971672-79971691	Msa0379080:intron	40.0%
!	ACAAACCAAACCTTGGTGTA+AGG	+	chr3_1:79971680-79971699	None:intergenic	40.0%
	TAGGCAAACACATTTGACAG+CGG	-	chr3_1:79972019-79972038	Msa0379080:intron	40.0%
	TACCAACTTCAGGTCGAAAA+AGG	+	chr3_1:79972510-79972529	None:intergenic	40.0%
	ACAATTTCAGAGTCGTGGAA+TGG	-	chr3_1:79972661-79972680	Msa0379080:CDS	40.0%
!	AGGTGTCTGTCTTTTGTACA+AGG	-	chr3_1:79972865-79972884	Msa0379080:CDS	40.0%
	ATTGCAGAGTTCGTCGTTCA+TGG	+	chr3_1:79970672-79970691	None:intergenic	45.0%
!!	CCGTTTGAAGAAGGAGCATT+GGG	+	chr3_1:79970734-79970753	None:intergenic	45.0%
	CCCAATGCTCCTTCTTCAAA+CGG	-	chr3_1:79970731-79970750	Msa0379080:three_prime_UTR	45.0%
!	ACCGTTTGAAGAAGGAGCAT+TGG	+	chr3_1:79970735-79970754	None:intergenic	45.0%
	TTAGCGTCACCGTTTGAAGA+AGG	+	chr3_1:79970743-79970762	None:intergenic	45.0%
	GACGCTAATTCCGAGAATTC+TGG	-	chr3_1:79970755-79970774	Msa0379080:three_prime_UTR	45.0%
	CTCTTGATGAAGCTCGTTTG+AGG	-	chr3_1:79970822-79970841	Msa0379080:three_prime_UTR	45.0%
!!	TCACACAGGTCCTTTTGACT+AGG	-	chr3_1:79971095-79971114	Msa0379080:intron	45.0%
	CAAAGCATGGCCTAGTCAAA+AGG	+	chr3_1:79971108-79971127	None:intergenic	45.0%
!!	CTTTTGACTAGGCCATGCTT+TGG	-	chr3_1:79971106-79971125	Msa0379080:intron	45.0%
	ACTCTCCTACTGGTGATATC+TGG	-	chr3_1:79971175-79971194	Msa0379080:intron	45.0%
	CTCTCCTACTGGTGATATCT+GGG	-	chr3_1:79971176-79971195	Msa0379080:intron	45.0%
	GTGATCAAGGATAGAGACAG+AGG	+	chr3_1:79972129-79972148	None:intergenic	45.0%
	TGGGAAAAGCTTGTGGATTC+TGG	-	chr3_1:79972320-79972339	Msa0379080:intron	45.0%
!!!	GTCCTTTTTCGACCTGAAGT+TGG	-	chr3_1:79972505-79972524	Msa0379080:intron	45.0%
!!	TTGGTAGTGCCTGCATTTGT+AGG	-	chr3_1:79972524-79972543	Msa0379080:intron	45.0%
!	TGGTAGTGCCTGCATTTGTA+GGG	-	chr3_1:79972525-79972544	Msa0379080:intron	45.0%
	ATTGCAGAGTTCGTCGTTCA+TGG	+	chr3_1:79970672-79970691	None:intergenic	45.0%
!!	CCGTTTGAAGAAGGAGCATT+GGG	+	chr3_1:79970734-79970753	None:intergenic	45.0%
	CCCAATGCTCCTTCTTCAAA+CGG	-	chr3_1:79970731-79970750	Msa0379080:three_prime_UTR	45.0%
!	ACCGTTTGAAGAAGGAGCAT+TGG	+	chr3_1:79970735-79970754	None:intergenic	45.0%
	TTAGCGTCACCGTTTGAAGA+AGG	+	chr3_1:79970743-79970762	None:intergenic	45.0%
	GACGCTAATTCCGAGAATTC+TGG	-	chr3_1:79970755-79970774	Msa0379080:three_prime_UTR	45.0%
	CTCTTGATGAAGCTCGTTTG+AGG	-	chr3_1:79970822-79970841	Msa0379080:three_prime_UTR	45.0%
!!	TCACACAGGTCCTTTTGACT+AGG	-	chr3_1:79971095-79971114	Msa0379080:intron	45.0%
	CAAAGCATGGCCTAGTCAAA+AGG	+	chr3_1:79971108-79971127	None:intergenic	45.0%
!!	CTTTTGACTAGGCCATGCTT+TGG	-	chr3_1:79971106-79971125	Msa0379080:intron	45.0%
	ACTCTCCTACTGGTGATATC+TGG	-	chr3_1:79971175-79971194	Msa0379080:intron	45.0%
	CTCTCCTACTGGTGATATCT+GGG	-	chr3_1:79971176-79971195	Msa0379080:intron	45.0%
	GTGATCAAGGATAGAGACAG+AGG	+	chr3_1:79972129-79972148	None:intergenic	45.0%
	TGGGAAAAGCTTGTGGATTC+TGG	-	chr3_1:79972320-79972339	Msa0379080:intron	45.0%
!!!	GTCCTTTTTCGACCTGAAGT+TGG	-	chr3_1:79972505-79972524	Msa0379080:intron	45.0%
!!	TTGGTAGTGCCTGCATTTGT+AGG	-	chr3_1:79972524-79972543	Msa0379080:intron	45.0%
!	TGGTAGTGCCTGCATTTGTA+GGG	-	chr3_1:79972525-79972544	Msa0379080:intron	45.0%
	ACGAACTCTGCAATCCCGTT+TGG	-	chr3_1:79970678-79970697	Msa0379080:three_prime_UTR	50.0%
	AACTCTGCAATCCCGTTTGG+TGG	-	chr3_1:79970681-79970700	Msa0379080:three_prime_UTR	50.0%
	AGGAGAAGTGGACCACCAAA+CGG	+	chr3_1:79970696-79970715	None:intergenic	50.0%
	AGTAGCAGAGGAAGGAGAAG+TGG	+	chr3_1:79970708-79970727	None:intergenic	50.0%
	TTGGGAGAAGTAGCAGAGGA+AGG	+	chr3_1:79970716-79970735	None:intergenic	50.0%
!	AGCATTGGGAGAAGTAGCAG+AGG	+	chr3_1:79970720-79970739	None:intergenic	50.0%
!	AGCGTGTTGGCCAGAATTCT+CGG	+	chr3_1:79970768-79970787	None:intergenic	50.0%
	AATTCTGGCCAACACGCTGA+CGG	-	chr3_1:79970770-79970789	Msa0379080:three_prime_UTR	50.0%
	GCATCCCAGATATCACCAGT+AGG	+	chr3_1:79971183-79971202	None:intergenic	50.0%
	AGGCCACTCAATGCTCCAAT+CGG	+	chr3_1:79971478-79971497	None:intergenic	50.0%
	CGGTTCAGCTGATAGTCCAA+TGG	-	chr3_1:79972039-79972058	Msa0379080:intron	50.0%
	ATGCAGGCACTACCAACTTC+AGG	+	chr3_1:79972520-79972539	None:intergenic	50.0%
	ACGAACTCTGCAATCCCGTT+TGG	-	chr3_1:79970678-79970697	Msa0379080:three_prime_UTR	50.0%
	AACTCTGCAATCCCGTTTGG+TGG	-	chr3_1:79970681-79970700	Msa0379080:three_prime_UTR	50.0%
	AGGAGAAGTGGACCACCAAA+CGG	+	chr3_1:79970696-79970715	None:intergenic	50.0%
	AGTAGCAGAGGAAGGAGAAG+TGG	+	chr3_1:79970708-79970727	None:intergenic	50.0%
	TTGGGAGAAGTAGCAGAGGA+AGG	+	chr3_1:79970716-79970735	None:intergenic	50.0%
!	AGCATTGGGAGAAGTAGCAG+AGG	+	chr3_1:79970720-79970739	None:intergenic	50.0%
!	AGCGTGTTGGCCAGAATTCT+CGG	+	chr3_1:79970768-79970787	None:intergenic	50.0%
	AATTCTGGCCAACACGCTGA+CGG	-	chr3_1:79970770-79970789	Msa0379080:three_prime_UTR	50.0%
	GCATCCCAGATATCACCAGT+AGG	+	chr3_1:79971183-79971202	None:intergenic	50.0%
	AGGCCACTCAATGCTCCAAT+CGG	+	chr3_1:79971478-79971497	None:intergenic	50.0%
	CGGTTCAGCTGATAGTCCAA+TGG	-	chr3_1:79972039-79972058	Msa0379080:intron	50.0%
	ATGCAGGCACTACCAACTTC+AGG	+	chr3_1:79972520-79972539	None:intergenic	50.0%
	GGAGAAGTGGACCACCAAAC+GGG	+	chr3_1:79970695-79970714	None:intergenic	55.0%
!!	GCACCGATTGGAGCATTGAG+TGG	-	chr3_1:79971472-79971491	Msa0379080:intron	55.0%
	GGAGAAGTGGACCACCAAAC+GGG	+	chr3_1:79970695-79970714	None:intergenic	55.0%
!!	GCACCGATTGGAGCATTGAG+TGG	-	chr3_1:79971472-79971491	Msa0379080:intron	55.0%
	GCCACCAGCACCACCACTAG+GGG	+	chr3_1:79970801-79970820	None:intergenic	65.0%
	CGCCACCAGCACCACCACTA+GGG	+	chr3_1:79970802-79970821	None:intergenic	65.0%
	GCCACCAGCACCACCACTAG+GGG	+	chr3_1:79970801-79970820	None:intergenic	65.0%
	CGCCACCAGCACCACCACTA+GGG	+	chr3_1:79970802-79970821	None:intergenic	65.0%
!	GCTGCCCCTAGTGGTGGTGC+TGG	-	chr3_1:79970794-79970813	Msa0379080:three_prime_UTR	70.0%
!	GCCCCTAGTGGTGGTGCTGG+TGG	-	chr3_1:79970797-79970816	Msa0379080:three_prime_UTR	70.0%
	GCGCCACCAGCACCACCACT+AGG	+	chr3_1:79970803-79970822	None:intergenic	70.0%
!	GCTGCCCCTAGTGGTGGTGC+TGG	-	chr3_1:79970794-79970813	Msa0379080:three_prime_UTR	70.0%
!	GCCCCTAGTGGTGGTGCTGG+TGG	-	chr3_1:79970797-79970816	Msa0379080:three_prime_UTR	70.0%
	GCGCCACCAGCACCACCACT+AGG	+	chr3_1:79970803-79970822	None:intergenic	70.0%
	GGGCAGCGCCGTCAGCGTGT+TGG	+	chr3_1:79970781-79970800	None:intergenic	75.0%
	GCTGACGGCGCTGCCCCTAG+TGG	-	chr3_1:79970785-79970804	Msa0379080:three_prime_UTR	75.0%
	GACGGCGCTGCCCCTAGTGG+TGG	-	chr3_1:79970788-79970807	Msa0379080:three_prime_UTR	75.0%
	GGGCAGCGCCGTCAGCGTGT+TGG	+	chr3_1:79970781-79970800	None:intergenic	75.0%
	GCTGACGGCGCTGCCCCTAG+TGG	-	chr3_1:79970785-79970804	Msa0379080:three_prime_UTR	75.0%
	GACGGCGCTGCCCCTAGTGG+TGG	-	chr3_1:79970788-79970807	Msa0379080:three_prime_UTR	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	79970537	79972929	79970537	ID=Msa0379080;Name=Msa0379080
chr3_1	mRNA	79970537	79972929	79970537	ID=Msa0379080-mRNA-1;Parent=Msa0379080;Name=Msa0379080-mRNA-1;_AED=0.03;_eAED=0.03;_QI=17\|1\|1\|1\|1\|1\|3\|408\|179
chr3_1	exon	79970537	79971043	79970537	ID=Msa0379080-mRNA-1:exon:19853;Parent=Msa0379080-mRNA-1
chr3_1	exon	79971355	79971444	79971355	ID=Msa0379080-mRNA-1:exon:19852;Parent=Msa0379080-mRNA-1
chr3_1	exon	79972562	79972929	79972562	ID=Msa0379080-mRNA-1:exon:19851;Parent=Msa0379080-mRNA-1
chr3_1	five_prime_UTR	79972913	79972929	79972913	ID=Msa0379080-mRNA-1:five_prime_utr;Parent=Msa0379080-mRNA-1
chr3_1	CDS	79972562	79972912	79972562	ID=Msa0379080-mRNA-1:cds;Parent=Msa0379080-mRNA-1
chr3_1	CDS	79971355	79971444	79971355	ID=Msa0379080-mRNA-1:cds;Parent=Msa0379080-mRNA-1
chr3_1	CDS	79970945	79971043	79970945	ID=Msa0379080-mRNA-1:cds;Parent=Msa0379080-mRNA-1
chr3_1	three_prime_UTR	79970537	79970944	79970537	ID=Msa0379080-mRNA-1:three_prime_utr;Parent=Msa0379080-mRNA-1

Gene Sequence

>Msa0379080

ATGGAAGAACAATCCATAAACGGCACAATGACAACTAAAACGACACAAGATTTAGCCATTGAAGGTCACAAATACTTAGAAGAAACCATACAACACGCTTTCAAGATACTCTCTTCCATGAACGACGAACTCTGCAATCCCGTTTGGTGGTCCACTTCTCCTTCCTCTGCTACTTCTCCCAATGCTCCTTCTTCAAACGGTGACGCTAATTCCGAGAATTCTGGCCAACACGCTGACGGCGCTGCCCCTAGTGGTGGTGCTGGTGGCGCTCTTGATGAAGCTCGTTTGAGGTATAAGAATGCTGTTGCTGGACTTCGCAGTGTTCTTGCTGCTATTCCTAATTCTCAGAAGGCAAACACATTTGACAGCGGTTCAGCTGATAGTCCAATGGATGAAGCTGAAATTGAGAAGTTGGAAGAGCAAGCATCTTCTTTAAGAAAGGAACTTGGCAACAAGAACTTGCACCTGAAGATACTCATAGATCAACTGCGAGAACTTATCACTGATATATCAACATGGCAAAGTCCTTTTTCGACCTGA

Protein sequence

>Msa0379080

MEEQSINGTMTTKTTQDLAIEGHKYLEETIQHAFKILSSMNDELCNPVWWSTSPSSATSPNAPSSNGDANSENSGQHADGAAPSGGAGGALDEARLRYKNAVAGLRSVLAAIPNSQKANTFDSGSADSPMDEAEIEKLEEQASSLRKELGNKNLHLKILIDQLRELITDISTWQSPFST*