Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346540 | XP_013469954.1 | 89.401 | 217 | 9 | 2 | 1 | 206 | 1 | 214 | 1.84e-134 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346540 | A0A072VQC5 | 89.401 | 217 | 9 | 2 | 1 | 206 | 1 | 214 | 8.79e-135 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006820 | Msa1346540 | 0.807915 | 4.003651e-50 | -8.615850e-47 |
| Msa0008850 | Msa1346540 | 0.823472 | 1.360250e-53 | -8.615850e-47 |
| Msa0028280 | Msa1346540 | 0.827278 | 1.709065e-54 | -8.615850e-47 |
| Msa0030030 | Msa1346540 | 0.856608 | 2.867215e-62 | -8.615850e-47 |
| Msa0038310 | Msa1346540 | 0.815630 | 8.378566e-52 | -8.615850e-47 |
| Msa0039200 | Msa1346540 | 0.880508 | 5.183195e-70 | -8.615850e-47 |
| Msa0047470 | Msa1346540 | 0.867397 | 1.410696e-65 | -8.615850e-47 |
| Msa0047940 | Msa1346540 | 0.832711 | 8.088369e-56 | -8.615850e-47 |
| Msa0050500 | Msa1346540 | 0.812234 | 4.698589e-51 | -8.615850e-47 |
| Msa0051100 | Msa1346540 | 0.841757 | 3.915883e-58 | -8.615850e-47 |
| Msa0055280 | Msa1346540 | 0.801022 | 1.095621e-48 | -8.615850e-47 |
| Msa0057740 | Msa1346540 | 0.824564 | 7.539001e-54 | -8.615850e-47 |
| Msa0060600 | Msa1346540 | 0.826924 | 2.077171e-54 | -8.615850e-47 |
| Msa0077330 | Msa1346540 | 0.850099 | 2.114032e-60 | -8.615850e-47 |
| Msa0086820 | Msa1346540 | 0.877118 | 8.119345e-69 | -8.615850e-47 |
| Msa0087880 | Msa1346540 | 0.824425 | 8.129537e-54 | -8.615850e-47 |
| Msa0089080 | Msa1346540 | -0.836802 | 7.557865e-57 | -8.615850e-47 |
| Msa0100250 | Msa1346540 | 0.828011 | 1.139570e-54 | -8.615850e-47 |
| Msa0101650 | Msa1346540 | 0.807083 | 6.011182e-50 | -8.615850e-47 |
| Msa0102410 | Msa1346540 | 0.811461 | 6.922551e-51 | -8.615850e-47 |
| Msa0103060 | Msa1346540 | 0.845381 | 4.209331e-59 | -8.615850e-47 |
| Msa0105340 | Msa1346540 | 0.815645 | 8.315740e-52 | -8.615850e-47 |
| Msa1344610 | Msa1346540 | 0.916358 | 1.960477e-85 | -8.615850e-47 |
| Msa1346540 | Msa1357720 | 0.838285 | 3.148448e-57 | -8.615850e-47 |
| Msa1346540 | Msa1360380 | 0.839791 | 1.282431e-57 | -8.615850e-47 |
| Msa1346540 | Msa1367390 | -0.802094 | 6.604882e-49 | -8.615850e-47 |
| Msa1346540 | Msa1370930 | -0.800136 | 1.660705e-48 | -8.615850e-47 |
| Msa1346540 | Msa1384980 | 0.827886 | 1.220872e-54 | -8.615850e-47 |
| Msa1346540 | Msa1385940 | 0.814560 | 1.447735e-51 | -8.615850e-47 |
| Msa1346540 | Msa1386520 | 0.808216 | 3.453677e-50 | -8.615850e-47 |
| Msa1346540 | Msa1393600 | 0.809215 | 2.112678e-50 | -8.615850e-47 |
| Msa1346540 | Msa1397540 | 0.801175 | 1.019457e-48 | -8.615850e-47 |
| Msa1346540 | Msa1404720 | 0.804309 | 2.297685e-49 | -8.615850e-47 |
| Msa1346540 | Msa1405470 | 0.851271 | 9.895991e-61 | -8.615850e-47 |
| Msa1346540 | Msa1408190 | 0.809129 | 2.203673e-50 | -8.615850e-47 |
| Msa1346540 | Msa1409050 | 0.812251 | 4.656324e-51 | -8.615850e-47 |
| Msa1346540 | Msa1409760 | 0.800892 | 1.164204e-48 | -8.615850e-47 |
| Msa1346540 | Msa1413220 | 0.813225 | 2.850655e-51 | -8.615850e-47 |
| Msa1346540 | Msa1415120 | 0.816172 | 6.341282e-52 | -8.615850e-47 |
| Msa1346540 | Msa1415270 | 0.801183 | 1.015406e-48 | -8.615850e-47 |
| Msa1346540 | Msa1419110 | 0.808433 | 3.104962e-50 | -8.615850e-47 |
| Msa1346540 | Msa1422750 | 0.814017 | 1.908087e-51 | -8.615850e-47 |
| Msa1346540 | Msa1422760 | 0.808570 | 2.902439e-50 | -8.615850e-47 |
| Msa1346540 | Msa1428440 | 0.846731 | 1.806574e-59 | -8.615850e-47 |
| Msa1346540 | Msa1435470 | 0.814500 | 1.493019e-51 | -8.615850e-47 |
| Msa1346540 | Msa1439230 | 0.807139 | 5.847595e-50 | -8.615850e-47 |
| Msa1346540 | Msa1440180 | 0.865173 | 7.156901e-65 | -8.615850e-47 |
| Msa1346540 | Msa1448990 | 0.811553 | 6.611067e-51 | -8.615850e-47 |
| Msa1346540 | Msa1449740 | 0.862902 | 3.646934e-64 | -8.615850e-47 |
| Msa1346540 | Msa1450420 | 0.800804 | 1.213805e-48 | -8.615850e-47 |
| Msa1346540 | Msa1452200 | 0.845961 | 2.929399e-59 | -8.615850e-47 |
| Msa0606060 | Msa1346540 | 0.809581 | 1.762621e-50 | -8.615850e-47 |
| Msa0606680 | Msa1346540 | 0.849394 | 3.326079e-60 | -8.615850e-47 |
| Msa0615850 | Msa1346540 | 0.802201 | 6.277193e-49 | -8.615850e-47 |
| Msa0617830 | Msa1346540 | 0.804103 | 2.536452e-49 | -8.615850e-47 |
| Msa0620640 | Msa1346540 | 0.804000 | 2.664343e-49 | -8.615850e-47 |
| Msa0620750 | Msa1346540 | 0.807615 | 4.635452e-50 | -8.615850e-47 |
| Msa0622340 | Msa1346540 | 0.811059 | 8.461018e-51 | -8.615850e-47 |
| Msa0635990 | Msa1346540 | 0.840853 | 6.770265e-58 | -8.615850e-47 |
| Msa0638040 | Msa1346540 | 0.806038 | 9.985875e-50 | -8.615850e-47 |
| Msa0639030 | Msa1346540 | 0.821379 | 4.166352e-53 | -8.615850e-47 |
| Msa0646390 | Msa1346540 | 0.805997 | 1.018709e-49 | -8.615850e-47 |
| Msa0651790 | Msa1346540 | 0.811322 | 7.417605e-51 | -8.615850e-47 |
| Msa0653710 | Msa1346540 | 0.818637 | 1.766874e-52 | -8.615850e-47 |
| Msa0654060 | Msa1346540 | 0.826645 | 2.421916e-54 | -8.615850e-47 |
| Msa0656270 | Msa1346540 | 0.831545 | 1.571436e-55 | -8.615850e-47 |
| Msa0662850 | Msa1346540 | 0.824419 | 8.155982e-54 | -8.615850e-47 |
| Msa0662860 | Msa1346540 | 0.806863 | 6.688685e-50 | -8.615850e-47 |
| Msa0686610 | Msa1346540 | 0.821196 | 4.592125e-53 | -8.615850e-47 |
| Msa0687320 | Msa1346540 | 0.814721 | 1.333508e-51 | -8.615850e-47 |
| Msa0697600 | Msa1346540 | 0.814927 | 1.200829e-51 | -8.615850e-47 |
| Msa0698900 | Msa1346540 | 0.828237 | 1.005456e-54 | -8.615850e-47 |
| Msa0700070 | Msa1346540 | 0.830084 | 3.583437e-55 | -8.615850e-47 |
| Msa0705050 | Msa1346540 | 0.817064 | 4.002744e-52 | -8.615850e-47 |
| Msa0719340 | Msa1346540 | 0.800019 | 1.753730e-48 | -8.615850e-47 |
| Msa0721150 | Msa1346540 | 0.818466 | 1.932085e-52 | -8.615850e-47 |
| Msa0724050 | Msa1346540 | 0.801054 | 1.079167e-48 | -8.615850e-47 |
| Msa0726610 | Msa1346540 | 0.803319 | 3.689278e-49 | -8.615850e-47 |
| Msa0729590 | Msa1346540 | 0.810375 | 1.189374e-50 | -8.615850e-47 |
| Msa0731740 | Msa1346540 | 0.810267 | 1.255125e-50 | -8.615850e-47 |
| Msa0734760 | Msa1346540 | 0.810989 | 8.762066e-51 | -8.615850e-47 |
| Msa0736930 | Msa1346540 | 0.866017 | 3.877354e-65 | -8.615850e-47 |
| Msa0739570 | Msa1346540 | 0.812010 | 5.256642e-51 | -8.615850e-47 |
| Msa0739610 | Msa1346540 | 0.844998 | 5.342209e-59 | -8.615850e-47 |
| Msa0751000 | Msa1346540 | 0.800269 | 1.560015e-48 | -8.615850e-47 |
| Msa0757990 | Msa1346540 | -0.801806 | 7.569203e-49 | -8.615850e-47 |
| Msa0761760 | Msa1346540 | 0.803179 | 3.943344e-49 | -8.615850e-47 |
| Msa0763880 | Msa1346540 | 0.810204 | 1.294990e-50 | -8.615850e-47 |
| Msa0763910 | Msa1346540 | 0.822354 | 2.478172e-53 | -8.615850e-47 |
| Msa0765010 | Msa1346540 | 0.816461 | 5.465798e-52 | -8.615850e-47 |
| Msa0765020 | Msa1346540 | 0.802420 | 5.657991e-49 | -8.615850e-47 |
| Msa0765040 | Msa1346540 | 0.803098 | 4.098442e-49 | -8.615850e-47 |
| Msa0766880 | Msa1346540 | 0.861989 | 6.961689e-64 | -8.615850e-47 |
| Msa0771960 | Msa1346540 | 0.886024 | 4.898975e-72 | -8.615850e-47 |
| Msa0773290 | Msa1346540 | 0.801287 | 9.668041e-49 | -8.615850e-47 |
| Msa0778580 | Msa1346540 | 0.804709 | 1.896247e-49 | -8.615850e-47 |
| Msa0782030 | Msa1346540 | 0.846028 | 2.808934e-59 | -8.615850e-47 |
| Msa0787720 | Msa1346540 | 0.821702 | 3.507588e-53 | -8.615850e-47 |
| Msa0793060 | Msa1346540 | 0.821583 | 3.737013e-53 | -8.615850e-47 |
| Msa0796450 | Msa1346540 | 0.802595 | 5.207307e-49 | -8.615850e-47 |
| Msa0796610 | Msa1346540 | 0.829738 | 4.351630e-55 | -8.615850e-47 |
| Msa0797620 | Msa1346540 | 0.802342 | 5.871643e-49 | -8.615850e-47 |
| Msa0804060 | Msa1346540 | 0.816846 | 4.479308e-52 | -8.615850e-47 |
| Msa0804930 | Msa1346540 | 0.803318 | 3.691284e-49 | -8.615850e-47 |
| Msa0815950 | Msa1346540 | 0.829286 | 5.604995e-55 | -8.615850e-47 |
| Msa0819670 | Msa1346540 | 0.821293 | 4.361870e-53 | -8.615850e-47 |
| Msa0822370 | Msa1346540 | 0.830298 | 3.177225e-55 | -8.615850e-47 |
| Msa0824770 | Msa1346540 | 0.818655 | 1.750384e-52 | -8.615850e-47 |
| Msa0834160 | Msa1346540 | 0.820629 | 6.199296e-53 | -8.615850e-47 |
| Msa0842240 | Msa1346540 | 0.814966 | 1.176803e-51 | -8.615850e-47 |
| Msa0130920 | Msa1346540 | 0.824176 | 9.300409e-54 | -8.615850e-47 |
| Msa0133670 | Msa1346540 | 0.881378 | 2.522886e-70 | -8.615850e-47 |
| Msa0133880 | Msa1346540 | 0.881301 | 2.689151e-70 | -8.615850e-47 |
| Msa0135890 | Msa1346540 | -0.817569 | 3.081050e-52 | -8.615850e-47 |
| Msa0151690 | Msa1346540 | 0.814682 | 1.360676e-51 | -8.615850e-47 |
| Msa0169960 | Msa1346540 | 0.852764 | 3.726604e-61 | -8.615850e-47 |
| Msa0175480 | Msa1346540 | 0.810055 | 1.394100e-50 | -8.615850e-47 |
| Msa0181290 | Msa1346540 | 0.814111 | 1.819878e-51 | -8.615850e-47 |
| Msa0184120 | Msa1346540 | 0.878136 | 3.584133e-69 | -8.615850e-47 |
| Msa0188500 | Msa1346540 | 0.870608 | 1.282832e-66 | -8.615850e-47 |
| Msa0203180 | Msa1346540 | 0.860293 | 2.285438e-63 | -8.615850e-47 |
| Msa0212960 | Msa1346540 | 0.816721 | 4.778999e-52 | -8.615850e-47 |
| Msa0215810 | Msa1346540 | 0.809367 | 1.959307e-50 | -8.615850e-47 |
| Msa0216010 | Msa1346540 | 0.803818 | 2.906697e-49 | -8.615850e-47 |
| Msa0216560 | Msa1346540 | 0.847029 | 1.497756e-59 | -8.615850e-47 |
| Msa0222510 | Msa1346540 | 0.805023 | 1.630213e-49 | -8.615850e-47 |
| Msa0222720 | Msa1346540 | 0.829103 | 6.205959e-55 | -8.615850e-47 |
| Msa0223100 | Msa1346540 | 0.826755 | 2.279252e-54 | -8.615850e-47 |
| Msa0223290 | Msa1346540 | 0.804537 | 2.059578e-49 | -8.615850e-47 |
| Msa0230980 | Msa1346540 | 0.855628 | 5.551483e-62 | -8.615850e-47 |
| Msa1224690 | Msa1346540 | 0.808617 | 2.836633e-50 | -8.615850e-47 |
| Msa1231520 | Msa1346540 | 0.835352 | 1.764155e-56 | -8.615850e-47 |
| Msa1233760 | Msa1346540 | 0.810743 | 9.905165e-51 | -8.615850e-47 |
| Msa1235020 | Msa1346540 | 0.846839 | 1.688105e-59 | -8.615850e-47 |
| Msa1235770 | Msa1346540 | 0.810336 | 1.212855e-50 | -8.615850e-47 |
| Msa1238410 | Msa1346540 | 0.816784 | 4.626557e-52 | -8.615850e-47 |
| Msa1242010 | Msa1346540 | 0.806167 | 9.380169e-50 | -8.615850e-47 |
| Msa1242990 | Msa1346540 | 0.854364 | 1.293223e-61 | -8.615850e-47 |
| Msa1265250 | Msa1346540 | 0.821958 | 3.061460e-53 | -8.615850e-47 |
| Msa1267860 | Msa1346540 | 0.812785 | 3.559019e-51 | -8.615850e-47 |
| Msa1272130 | Msa1346540 | 0.855513 | 6.000720e-62 | -8.615850e-47 |
| Msa1274310 | Msa1346540 | 0.809880 | 1.520820e-50 | -8.615850e-47 |
| Msa1282210 | Msa1346540 | 0.842386 | 2.669269e-58 | -8.615850e-47 |
| Msa1284390 | Msa1346540 | 0.832658 | 8.336060e-56 | -8.615850e-47 |
| Msa1306700 | Msa1346540 | 0.876170 | 1.727178e-68 | -8.615850e-47 |
| Msa1309910 | Msa1346540 | 0.814046 | 1.880223e-51 | -8.615850e-47 |
| Msa1322420 | Msa1346540 | 0.808249 | 3.398315e-50 | -8.615850e-47 |
| Msa1323920 | Msa1346540 | 0.830279 | 3.211819e-55 | -8.615850e-47 |
| Msa1327820 | Msa1346540 | 0.803039 | 4.215663e-49 | -8.615850e-47 |
| Msa1334650 | Msa1346540 | 0.815259 | 1.013095e-51 | -8.615850e-47 |
| Msa1335720 | Msa1346540 | 0.815842 | 7.515929e-52 | -8.615850e-47 |
| Msa1342400 | Msa1346540 | 0.865974 | 3.998819e-65 | -8.615850e-47 |
| Msa1344080 | Msa1346540 | 0.898207 | 6.651832e-77 | -8.615850e-47 |
| Msa0365150 | Msa1346540 | 0.802896 | 4.512558e-49 | -8.615850e-47 |
| Msa0369750 | Msa1346540 | 0.834687 | 2.595085e-56 | -8.615850e-47 |
| Msa0369780 | Msa1346540 | 0.826267 | 2.979479e-54 | -8.615850e-47 |
| Msa0370870 | Msa1346540 | 0.806182 | 9.312960e-50 | -8.615850e-47 |
| Msa0379500 | Msa1346540 | 0.832705 | 8.114612e-56 | -8.615850e-47 |
| Msa0404180 | Msa1346540 | 0.851327 | 9.540347e-61 | -8.615850e-47 |
| Msa0411000 | Msa1346540 | 0.801988 | 6.943500e-49 | -8.615850e-47 |
| Msa0417150 | Msa1346540 | 0.838242 | 3.231170e-57 | -8.615850e-47 |
| Msa0419050 | Msa1346540 | 0.809886 | 1.515566e-50 | -8.615850e-47 |
| Msa0421800 | Msa1346540 | 0.824641 | 7.231362e-54 | -8.615850e-47 |
| Msa0423110 | Msa1346540 | 0.812503 | 4.102296e-51 | -8.615850e-47 |
| Msa0423600 | Msa1346540 | 0.820397 | 7.009187e-53 | -8.615850e-47 |
| Msa0427050 | Msa1346540 | 0.847262 | 1.292603e-59 | -8.615850e-47 |
| Msa0431830 | Msa1346540 | 0.804873 | 1.753089e-49 | -8.615850e-47 |
| Msa0448400 | Msa1346540 | 0.820741 | 5.842071e-53 | -8.615850e-47 |
| Msa0456480 | Msa1346540 | 0.872251 | 3.670579e-67 | -8.615850e-47 |
| Msa0459120 | Msa1346540 | 0.821887 | 3.178862e-53 | -8.615850e-47 |
| Msa0462980 | Msa1346540 | -0.815481 | 9.044307e-52 | -8.615850e-47 |
| Msa0463540 | Msa1346540 | 0.809524 | 1.813853e-50 | -8.615850e-47 |
| Msa0463960 | Msa1346540 | 0.831562 | 1.555930e-55 | -8.615850e-47 |
| Msa0463990 | Msa1346540 | 0.806644 | 7.440990e-50 | -8.615850e-47 |
| Msa0467800 | Msa1346540 | 0.823771 | 1.157339e-53 | -8.615850e-47 |
| Msa0467880 | Msa1346540 | 0.823847 | 1.111099e-53 | -8.615850e-47 |
| Msa0471790 | Msa1346540 | 0.814783 | 1.292424e-51 | -8.615850e-47 |
| Msa0473450 | Msa1346540 | 0.836201 | 1.074847e-56 | -8.615850e-47 |
| Msa0475360 | Msa1346540 | 0.862243 | 5.817676e-64 | -8.615850e-47 |
| Msa0981900 | Msa1346540 | 0.815556 | 8.700708e-52 | -8.615850e-47 |
| Msa0982590 | Msa1346540 | 0.864466 | 1.191634e-64 | -8.615850e-47 |
| Msa1016110 | Msa1346540 | 0.825123 | 5.564332e-54 | -8.615850e-47 |
| Msa1016130 | Msa1346540 | 0.856824 | 2.477880e-62 | -8.615850e-47 |
| Msa1024580 | Msa1346540 | 0.811292 | 7.531767e-51 | -8.615850e-47 |
| Msa1033160 | Msa1346540 | 0.824134 | 9.517175e-54 | -8.615850e-47 |
| Msa1033230 | Msa1346540 | 0.835171 | 1.959738e-56 | -8.615850e-47 |
| Msa1041550 | Msa1346540 | 0.828262 | 9.914948e-55 | -8.615850e-47 |
| Msa1043870 | Msa1346540 | 0.831825 | 1.340438e-55 | -8.615850e-47 |
| Msa1044330 | Msa1346540 | 0.829729 | 4.374755e-55 | -8.615850e-47 |
| Msa1071310 | Msa1346540 | 0.804898 | 1.732112e-49 | -8.615850e-47 |
| Msa1079610 | Msa1346540 | 0.847533 | 1.088840e-59 | -8.615850e-47 |
| Msa1081530 | Msa1346540 | 0.810716 | 1.003768e-50 | -8.615850e-47 |
| Msa1092820 | Msa1346540 | 0.802073 | 6.670989e-49 | -8.615850e-47 |
| Msa1102180 | Msa1346540 | 0.869328 | 3.360961e-66 | -8.615850e-47 |
| Msa1102200 | Msa1346540 | 0.843916 | 1.044176e-58 | -8.615850e-47 |
| Msa0246300 | Msa1346540 | 0.845310 | 4.399354e-59 | -8.615850e-47 |
| Msa0251150 | Msa1346540 | 0.809311 | 2.015115e-50 | -8.615850e-47 |
| Msa0256170 | Msa1346540 | 0.857159 | 1.973848e-62 | -8.615850e-47 |
| Msa0256430 | Msa1346540 | 0.873380 | 1.537335e-67 | -8.615850e-47 |
| Msa0264020 | Msa1346540 | 0.836323 | 1.000973e-56 | -8.615850e-47 |
| Msa0270460 | Msa1346540 | 0.860171 | 2.487024e-63 | -8.615850e-47 |
| Msa0277280 | Msa1346540 | -0.805482 | 1.306721e-49 | -8.615850e-47 |
| Msa0284870 | Msa1346540 | 0.852365 | 4.843053e-61 | -8.615850e-47 |
| Msa0288320 | Msa1346540 | 0.853819 | 1.857456e-61 | -8.615850e-47 |
| Msa0295840 | Msa1346540 | 0.869300 | 3.433707e-66 | -8.615850e-47 |
| Msa0306130 | Msa1346540 | 0.810009 | 1.426423e-50 | -8.615850e-47 |
| Msa0309060 | Msa1346540 | 0.832876 | 7.358574e-56 | -8.615850e-47 |
| Msa0310490 | Msa1346540 | 0.838628 | 2.567973e-57 | -8.615850e-47 |
| Msa0311330 | Msa1346540 | 0.802018 | 6.846176e-49 | -8.615850e-47 |
| Msa0312310 | Msa1346540 | 0.802823 | 4.672089e-49 | -8.615850e-47 |
| Msa0323630 | Msa1346540 | 0.837623 | 4.659593e-57 | -8.615850e-47 |
| Msa0323640 | Msa1346540 | 0.806585 | 7.658192e-50 | -8.615850e-47 |
| Msa0330270 | Msa1346540 | 0.827874 | 1.229563e-54 | -8.615850e-47 |
| Msa0330400 | Msa1346540 | 0.801394 | 9.192808e-49 | -8.615850e-47 |
| Msa0331740 | Msa1346540 | 0.801826 | 7.494801e-49 | -8.615850e-47 |
| Msa0334180 | Msa1346540 | 0.849273 | 3.594038e-60 | -8.615850e-47 |
| Msa0336270 | Msa1346540 | 0.842398 | 2.649988e-58 | -8.615850e-47 |
| Msa0339340 | Msa1346540 | 0.826653 | 2.410547e-54 | -8.615850e-47 |
| Msa0339560 | Msa1346540 | 0.810899 | 9.163863e-51 | -8.615850e-47 |
| Msa0349050 | Msa1346540 | 0.842124 | 3.132331e-58 | -8.615850e-47 |
| Msa0362430 | Msa1346540 | 0.811461 | 6.922390e-51 | -8.615850e-47 |
| Msa1115580 | Msa1346540 | 0.800081 | 1.703791e-48 | -8.615850e-47 |
| Msa1123340 | Msa1346540 | 0.802117 | 6.531994e-49 | -8.615850e-47 |
| Msa1124440 | Msa1346540 | 0.847984 | 8.180108e-60 | -8.615850e-47 |
| Msa1138600 | Msa1346540 | 0.824515 | 7.743451e-54 | -8.615850e-47 |
| Msa1157920 | Msa1346540 | 0.822719 | 2.038109e-53 | -8.615850e-47 |
| Msa1161160 | Msa1346540 | 0.821446 | 4.020769e-53 | -8.615850e-47 |
| Msa1166450 | Msa1346540 | 0.842386 | 2.670007e-58 | -8.615850e-47 |
| Msa1168130 | Msa1346540 | 0.822109 | 2.824495e-53 | -8.615850e-47 |
| Msa1173410 | Msa1346540 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
| Msa1182990 | Msa1346540 | 0.824312 | 8.641233e-54 | -8.615850e-47 |
| Msa1186580 | Msa1346540 | 0.811540 | 6.653493e-51 | -8.615850e-47 |
| Msa1188820 | Msa1346540 | 0.834540 | 2.825003e-56 | -8.615850e-47 |
| Msa1209790 | Msa1346540 | 0.822268 | 2.594180e-53 | -8.615850e-47 |
| Msa1211390 | Msa1346540 | 0.822287 | 2.567316e-53 | -8.615850e-47 |
| Msa1218650 | Msa1346540 | 0.806346 | 8.601936e-50 | -8.615850e-47 |
| Msa1220740 | Msa1346540 | 0.819378 | 1.198794e-52 | -8.615850e-47 |
| Msa0486860 | Msa1346540 | 0.801229 | 9.936797e-49 | -8.615850e-47 |
| Msa0488850 | Msa1346540 | 0.843110 | 1.714098e-58 | -8.615850e-47 |
| Msa0496460 | Msa1346540 | 0.819651 | 1.038550e-52 | -8.615850e-47 |
| Msa0496570 | Msa1346540 | 0.802591 | 5.215975e-49 | -8.615850e-47 |
| Msa0502910 | Msa1346540 | 0.807230 | 5.593935e-50 | -8.615850e-47 |
| Msa0505660 | Msa1346540 | 0.823630 | 1.249348e-53 | -8.615850e-47 |
| Msa0509500 | Msa1346540 | 0.816162 | 6.375856e-52 | -8.615850e-47 |
| Msa0509540 | Msa1346540 | 0.827056 | 1.930909e-54 | -8.615850e-47 |
| Msa0510560 | Msa1346540 | 0.811466 | 6.904969e-51 | -8.615850e-47 |
| Msa0514260 | Msa1346540 | 0.824667 | 7.128350e-54 | -8.615850e-47 |
| Msa0514990 | Msa1346540 | 0.808419 | 3.126166e-50 | -8.615850e-47 |
| Msa0516310 | Msa1346540 | 0.809696 | 1.665451e-50 | -8.615850e-47 |
| Msa0534420 | Msa1346540 | 0.800938 | 1.139367e-48 | -8.615850e-47 |
| Msa0549330 | Msa1346540 | 0.819066 | 1.411538e-52 | -8.615850e-47 |
| Msa0549740 | Msa1346540 | 0.806691 | 7.274293e-50 | -8.615850e-47 |
| Msa0550630 | Msa1346540 | 0.811409 | 7.103681e-51 | -8.615850e-47 |
| Msa0553520 | Msa1346540 | 0.803302 | 3.719840e-49 | -8.615850e-47 |
| Msa0558890 | Msa1346540 | 0.834842 | 2.372638e-56 | -8.615850e-47 |
| Msa0568490 | Msa1346540 | 0.827977 | 1.161057e-54 | -8.615850e-47 |
| Msa0576600 | Msa1346540 | 0.808732 | 2.679742e-50 | -8.615850e-47 |
| Msa0577870 | Msa1346540 | 0.811205 | 7.865787e-51 | -8.615850e-47 |
| Msa0598250 | Msa1346540 | 0.830668 | 2.579278e-55 | -8.615850e-47 |
| Msa0844100 | Msa1346540 | 0.816608 | 5.065954e-52 | -8.615850e-47 |
| Msa0844350 | Msa1346540 | 0.802275 | 6.059695e-49 | -8.615850e-47 |
| Msa0860270 | Msa1346540 | 0.803852 | 2.860736e-49 | -8.615850e-47 |
| Msa0861560 | Msa1346540 | 0.836152 | 1.106177e-56 | -8.615850e-47 |
| Msa0861800 | Msa1346540 | 0.822299 | 2.551360e-53 | -8.615850e-47 |
| Msa0863760 | Msa1346540 | 0.800100 | 1.688535e-48 | -8.615850e-47 |
| Msa0868040 | Msa1346540 | 0.823126 | 1.638445e-53 | -8.615850e-47 |
| Msa0873010 | Msa1346540 | 0.802831 | 4.654229e-49 | -8.615850e-47 |
| Msa0887000 | Msa1346540 | 0.800901 | 1.159477e-48 | -8.615850e-47 |
| Msa0887070 | Msa1346540 | 0.813013 | 3.173076e-51 | -8.615850e-47 |
| Msa0897390 | Msa1346540 | 0.803608 | 3.214459e-49 | -8.615850e-47 |
| Msa0934830 | Msa1346540 | 0.860635 | 1.800563e-63 | -8.615850e-47 |
| Msa0950410 | Msa1346540 | 0.821654 | 3.599701e-53 | -8.615850e-47 |
| Msa0964680 | Msa1346540 | 0.800023 | 1.750170e-48 | -8.615850e-47 |
| Msa0971860 | Msa1346540 | 0.850481 | 1.651434e-60 | -8.615850e-47 |
| Msa0978000 | Msa1346540 | 0.839472 | 1.552827e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346540 | MtrunA17_Chr1g0206811 | 89.401 | 217 | 9 | 2 | 1 | 206 | 1 | 214 | 1.69e-138 | 385 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1346540 | AT1G50020.1 | 50.943 | 212 | 81 | 6 | 8 | 206 | 8 | 209 | 1.70e-63 | 196 |
Find 51 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAATTTCTGGGAAAAT+TGG | 0.118542 | tig0009027:-33936 | None:intergenic |
| ATTATTCCATGAAGAATTTC+TGG | 0.158065 | tig0009027:-33945 | None:intergenic |
| TAGCTCCTCGGCTAAATTAA+AGG | 0.278659 | tig0009027:+36746 | Msa1346540:CDS |
| TCAACACTTCCAAGTCTTCC+AGG | 0.320266 | tig0009027:+34017 | Msa1346540:CDS |
| GGAACATTCTTCTTGGCATT+TGG | 0.330859 | tig0009027:+35840 | Msa1346540:CDS |
| GAATCAGAGGGAACGGTCTA+TGG | 0.337234 | tig0009027:+35164 | Msa1346540:CDS |
| ACTTGGAGGAACATTCTTCT+TGG | 0.347709 | tig0009027:+35833 | Msa1346540:CDS |
| CGTCTGTGAATGAAGAAGAT+AGG | 0.375141 | tig0009027:+35091 | Msa1346540:CDS |
| GATTACAAGCAAACCAACTA+TGG | 0.380799 | tig0009027:+35054 | Msa1346540:CDS |
| CTTCCGTCGTGGACAAAACT+TGG | 0.396329 | tig0009027:-36652 | None:intergenic |
| TCATCTTCTAAGAGTGCATA+AGG | 0.401040 | tig0009027:-36709 | None:intergenic |
| CTCTTCATCAACTCCATAGT+TGG | 0.411357 | tig0009027:-35067 | None:intergenic |
| GGGAAAATTGGATTGTGAAA+GGG | 0.446334 | tig0009027:-33924 | None:intergenic |
| TGGGAAAATTGGATTGTGAA+AGG | 0.466227 | tig0009027:-33925 | None:intergenic |
| GTGAAAGGGAAAGTTGAGAG+AGG | 0.470279 | tig0009027:-33910 | None:intergenic |
| TTATTCCATGAAGAATTTCT+GGG | 0.471291 | tig0009027:-33944 | None:intergenic |
| GTCTGTGAATGAAGAAGATA+GGG | 0.475928 | tig0009027:+35092 | Msa1346540:CDS |
| TTGAAGGAGTTGAAGAGGAG+AGG | 0.477717 | tig0009027:+35006 | Msa1346540:CDS |
| ACAACAGACCCTGGAAGACT+TGG | 0.496923 | tig0009027:-34026 | None:intergenic |
| CAACACTTCCAAGTCTTCCA+GGG | 0.512123 | tig0009027:+34018 | Msa1346540:CDS |
| AAACTTCTATTGACACTTGG+AGG | 0.515017 | tig0009027:+35819 | Msa1346540:CDS |
| TAATCCTCAAGCAATGATGT+AGG | 0.515998 | tig0009027:-35036 | None:intergenic |
| AATCCTCAAGCAATGATGTA+GGG | 0.519413 | tig0009027:-35035 | None:intergenic |
| ACTATCACCTCCACAATATG+TGG | 0.522313 | tig0009027:+36684 | Msa1346540:CDS |
| CTCTAGACCCCTCTCAACAT+TGG | 0.523903 | tig0009027:-35142 | None:intergenic |
| TGAAAGGGAAAGTTGAGAGA+GGG | 0.536654 | tig0009027:-33909 | None:intergenic |
| CATCTTCTAAGAGTGCATAA+GGG | 0.537509 | tig0009027:-36708 | None:intergenic |
| GCATAAGGGTCCACATATTG+TGG | 0.543635 | tig0009027:-36694 | None:intergenic |
| AGAGGGGTCTAGAGAATCAG+AGG | 0.544137 | tig0009027:+35151 | Msa1346540:CDS |
| GTCTAGAGAATCAGAGGGAA+CGG | 0.571889 | tig0009027:+35157 | Msa1346540:CDS |
| AGGGAAAGTTGAGAGAGGGT+TGG | 0.572433 | tig0009027:-33905 | None:intergenic |
| ATTCTCAGGAGAAGAGCCTC+CGG | 0.574850 | tig0009027:+34972 | Msa1346540:intron |
| GACCCCTACATCATTGCTTG+AGG | 0.575241 | tig0009027:+35032 | Msa1346540:CDS |
| ATGCACTCTTAGAAGATGAA+AGG | 0.586584 | tig0009027:+36713 | Msa1346540:CDS |
| GCTAAACTTCTATTGACACT+TGG | 0.589619 | tig0009027:+35816 | Msa1346540:CDS |
| AGTGTCAACCAATGTTGAGA+GGG | 0.601124 | tig0009027:+35134 | Msa1346540:CDS |
| GCCACGGTTATGAGGATCAA+CGG | 0.602581 | tig0009027:-35864 | None:intergenic |
| AGAACTACTACAACAGACCC+TGG | 0.607538 | tig0009027:-34035 | None:intergenic |
| CAGTGTCAACCAATGTTGAG+AGG | 0.610884 | tig0009027:+35133 | Msa1346540:CDS |
| GGATATCTCAGATAGCTCCT+CGG | 0.629394 | tig0009027:+36734 | Msa1346540:CDS |
| GTGACATCTTGCTTCCGTCG+TGG | 0.633182 | tig0009027:-36663 | None:intergenic |
| GCTGAACAGTGAAGGTCTTG+AGG | 0.634680 | tig0009027:+35188 | Msa1346540:CDS |
| ATCCTCAAGCAATGATGTAG+GGG | 0.635911 | tig0009027:-35034 | None:intergenic |
| CAACTATGGAGTTGATGAAG+AGG | 0.637558 | tig0009027:+35068 | Msa1346540:CDS |
| TCTATGGCGCTGAACAGTGA+AGG | 0.641145 | tig0009027:+35180 | Msa1346540:CDS |
| GTCAATAGAAGTTTAGCTCG+AGG | 0.648431 | tig0009027:-35810 | None:intergenic |
| GAGGGGTCTAGAGAATCAGA+GGG | 0.670863 | tig0009027:+35152 | Msa1346540:CDS |
| TAAGGGTCCACATATTGTGG+AGG | 0.678073 | tig0009027:-36691 | None:intergenic |
| GTGTCAACCAATGTTGAGAG+GGG | 0.698061 | tig0009027:+35135 | Msa1346540:CDS |
| ACCGTTGATCCTCATAACCG+TGG | 0.700978 | tig0009027:+35863 | Msa1346540:CDS |
| TCTGTGAATGAAGAAGATAG+GGG | 0.748330 | tig0009027:+35093 | Msa1346540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAAAACAATTTTTATCAA+CGG | - | tig0009027:34406-34425 | None:intergenic | 15.0% |
| !!! | TATATTTTGAGAATCAATTT+TGG | + | tig0009027:34642-34661 | Msa1346540:intron | 15.0% |
| !!! | AAAAATTTCATATTGTGTTT+TGG | + | tig0009027:34687-34706 | Msa1346540:intron | 15.0% |
| !!! | TTTTACATACTTTCTAAATA+GGG | + | tig0009027:35643-35662 | Msa1346540:intron | 15.0% |
| !! | TATTTACTACAATACAAATA+AGG | - | tig0009027:35673-35692 | None:intergenic | 15.0% |
| !!! | AGAATATACATTTTTTCTAA+AGG | - | tig0009027:36146-36165 | None:intergenic | 15.0% |
| !! | TTTGTGAAAAAAACATTGTT+GGG | - | tig0009027:33975-33994 | None:intergenic | 20.0% |
| !!! | TTTTGTGAAAAAAACATTGT+TGG | - | tig0009027:33976-33995 | None:intergenic | 20.0% |
| !!! | TGTTGAAATTTTGAAACTTT+AGG | - | tig0009027:34003-34022 | None:intergenic | 20.0% |
| !!! | TTTTATGTATTGATGTTGAT+TGG | + | tig0009027:34239-34258 | Msa1346540:intron | 20.0% |
| !! | CTTTAATATAAATACTCATG+AGG | + | tig0009027:34264-34283 | Msa1346540:intron | 20.0% |
| !!! | AAATTGTTTTTTGAGTGAAT+TGG | + | tig0009027:34413-34432 | Msa1346540:intron | 20.0% |
| !!! | TGGTTATGTAAAATTGTTTT+TGG | + | tig0009027:34433-34452 | Msa1346540:intron | 20.0% |
| !!! | ACACAATATGAAATTTTTCT+AGG | - | tig0009027:34685-34704 | None:intergenic | 20.0% |
| !! | TAAAGTGAAATATTTGAATG+TGG | + | tig0009027:34789-34808 | Msa1346540:intron | 20.0% |
| !!! | TATATAAAAAATCGCTGATT+TGG | + | tig0009027:35242-35261 | Msa1346540:intron | 20.0% |
| !!! | GTTTTACATACTTTCTAAAT+AGG | + | tig0009027:35642-35661 | Msa1346540:intron | 20.0% |
| !! | ATAGTACACATTTAATGATA+TGG | + | tig0009027:35985-36004 | Msa1346540:intron | 20.0% |
| !! | TAATGTTAAACATAAACCAT+AGG | - | tig0009027:36379-36398 | None:intergenic | 20.0% |
| ! | TTATTCCATGAAGAATTTCT+GGG | - | tig0009027:33947-33966 | None:intergenic | 25.0% |
| ! | ATTATTCCATGAAGAATTTC+TGG | - | tig0009027:33948-33967 | None:intergenic | 25.0% |
| !!! | CTTTAGAGTAGTAATGATTT+TGG | + | tig0009027:34098-34117 | Msa1346540:intron | 25.0% |
| ! | ATCCATCATCATACAAAAAA+AGG | - | tig0009027:34186-34205 | None:intergenic | 25.0% |
| ! | TAATATAAATACTCATGAGG+TGG | + | tig0009027:34267-34286 | Msa1346540:intron | 25.0% |
| ! | TGATGAGTTCATATATTGTT+TGG | + | tig0009027:34294-34313 | Msa1346540:intron | 25.0% |
| ! | TTCAAGTAGAATCAATTCTA+GGG | + | tig0009027:34571-34590 | Msa1346540:intron | 25.0% |
| !!! | AGAATTGATTTTGTCATGTT+TGG | - | tig0009027:34623-34642 | None:intergenic | 25.0% |
| ! | TCACTTTATCAAATTATCAC+AGG | - | tig0009027:34777-34796 | None:intergenic | 25.0% |
| ! | TATTGAAGGAAAGTTAACAA+TGG | - | tig0009027:35219-35238 | None:intergenic | 25.0% |
| ! | TATCTCTCTAATTATGAGAA+TGG | - | tig0009027:35547-35566 | None:intergenic | 25.0% |
| ! | ATAAATATGCAAGTGATTTC+TGG | - | tig0009027:35772-35791 | None:intergenic | 25.0% |
| ! | TTGCATATTTATCCATTTCA+GGG | + | tig0009027:35780-35799 | Msa1346540:intron | 25.0% |
| !!! | ATATTCTAGCTTATAACAGT+TGG | + | tig0009027:36159-36178 | Msa1346540:intron | 25.0% |
| ! | TGAAGAATTTCTGGGAAAAT+TGG | - | tig0009027:33939-33958 | None:intergenic | 30.0% |
| ! | ATTTTCCCAGAAATTCTTCA+TGG | + | tig0009027:33939-33958 | Msa1346540:CDS | 30.0% |
| TGAAAAAAACATTGTTGGGT+TGG | - | tig0009027:33971-33990 | None:intergenic | 30.0% | |
| !!! | AGCCTTTTTTTGTATGATGA+TGG | + | tig0009027:34181-34200 | Msa1346540:intron | 30.0% |
| GAGTTCATATATTGTTTGGA+TGG | + | tig0009027:34298-34317 | Msa1346540:intron | 30.0% | |
| ACACTTATGTCCTTATAGTT+TGG | + | tig0009027:34341-34360 | Msa1346540:intron | 30.0% | |
| !!! | TGTTTACTTGGTGTATGTTT+TGG | + | tig0009027:34376-34395 | Msa1346540:intron | 30.0% |
| TGAAGCAAGTGATTTATGTT+CGG | + | tig0009027:34468-34487 | Msa1346540:intron | 30.0% | |
| CTTCAAGTAGAATCAATTCT+AGG | + | tig0009027:34570-34589 | Msa1346540:intron | 30.0% | |
| TCAAGTAGAATCAATTCTAG+GGG | + | tig0009027:34572-34591 | Msa1346540:intron | 30.0% | |
| ! | TAACTAACTGTACCTTTTGA+TGG | + | tig0009027:34925-34944 | Msa1346540:intron | 30.0% |
| GAGAATCAATACAGTATTAG+CGG | - | tig0009027:34958-34977 | None:intergenic | 30.0% | |
| !! | CTAATACTGTATTGATTCTC+AGG | + | tig0009027:34958-34977 | Msa1346540:intron | 30.0% |
| TCCTTCAAAAATAATGACTC+CGG | - | tig0009027:34994-35013 | None:intergenic | 30.0% | |
| !! | TATTTTTGAAGGAGTTGAAG+AGG | + | tig0009027:35001-35020 | Msa1346540:CDS | 30.0% |
| ATAAACAGCCAAATCAAGTT+TGG | - | tig0009027:35382-35401 | None:intergenic | 30.0% | |
| TAACATCTTGATCTGATGTT+TGG | + | tig0009027:35418-35437 | Msa1346540:intron | 30.0% | |
| ! | ATCTGATGTTTGGAACTTAA+AGG | + | tig0009027:35428-35447 | Msa1346540:intron | 30.0% |
| ! | TGTAAGCTGTATTTCTATGA+CGG | - | tig0009027:35731-35750 | None:intergenic | 30.0% |
| CTTGCATATTTATCCATTTC+AGG | + | tig0009027:35779-35798 | Msa1346540:intron | 30.0% | |
| TAGATTACTTAACACGCAAA+CGG | - | tig0009027:35964-35983 | None:intergenic | 30.0% | |
| GTACACATTTAATGATATGG+TGG | + | tig0009027:35988-36007 | Msa1346540:intron | 30.0% | |
| TGAAGTGAGTAACAATTTGA+TGG | + | tig0009027:36049-36068 | Msa1346540:intron | 30.0% | |
| ACTAAGACTTCAGAACATTT+AGG | + | tig0009027:36103-36122 | Msa1346540:intron | 30.0% | |
| !!! | ATTTTTTCTAAAGGAAGCTG+AGG | - | tig0009027:36137-36156 | None:intergenic | 30.0% |
| ! | TTGATTTTGTGTCTGTTGTT+TGG | + | tig0009027:36233-36252 | Msa1346540:intron | 30.0% |
| ! | GTTTTTGTGCATTCAATTCT+TGG | + | tig0009027:36292-36311 | Msa1346540:intron | 30.0% |
| ACATAAACCATAGGATAGAT+GGG | - | tig0009027:36370-36389 | None:intergenic | 30.0% | |
| AACATAAACCATAGGATAGA+TGG | - | tig0009027:36371-36390 | None:intergenic | 30.0% | |
| ! | ATAGTCTTCAGTTTTCAACA+GGG | - | tig0009027:36441-36460 | None:intergenic | 30.0% |
| ! | AATAGTCTTCAGTTTTCAAC+AGG | - | tig0009027:36442-36461 | None:intergenic | 30.0% |
| TTTGTGCTTGTATGAAATAG+TGG | + | tig0009027:36559-36578 | Msa1346540:intron | 30.0% | |
| CAACGTTCTATATTACATGA+AGG | - | tig0009027:36597-36616 | None:intergenic | 30.0% | |
| CATGTAATATAGAACGTTGA+TGG | + | tig0009027:36598-36617 | Msa1346540:intron | 30.0% | |
| !!! | CTGTTTTTGTTGCAGTATTT+CGG | + | tig0009027:36628-36647 | Msa1346540:intron | 30.0% |
| GGGAAAATTGGATTGTGAAA+GGG | - | tig0009027:33927-33946 | None:intergenic | 35.0% | |
| TGGGAAAATTGGATTGTGAA+AGG | - | tig0009027:33928-33947 | None:intergenic | 35.0% | |
| GATGCCAAGAATCAAAACAA+TGG | + | tig0009027:34061-34080 | Msa1346540:intron | 35.0% | |
| !!! | CTTGCCATTGTTTTGATTCT+TGG | - | tig0009027:34068-34087 | None:intergenic | 35.0% |
| ACATGAAGGACCAAACTATA+AGG | - | tig0009027:34354-34373 | None:intergenic | 35.0% | |
| !! | TCCTTCATGTGTTGTTTACT+TGG | + | tig0009027:34364-34383 | Msa1346540:intron | 35.0% |
| ACCAAGTAAACAACACATGA+AGG | - | tig0009027:34368-34387 | None:intergenic | 35.0% | |
| TTCTAGGTTTCACTTCTAGA+GGG | - | tig0009027:34669-34688 | None:intergenic | 35.0% | |
| TTTCTAGGTTTCACTTCTAG+AGG | - | tig0009027:34670-34689 | None:intergenic | 35.0% | |
| ATTGATACAACACCAACACA+TGG | - | tig0009027:34815-34834 | None:intergenic | 35.0% | |
| !! | TGTTGGTGTTGTATCAATGT+TGG | + | tig0009027:34817-34836 | Msa1346540:intron | 35.0% |
| TTCAAAAATAATGACTCCGG+AGG | - | tig0009027:34991-35010 | None:intergenic | 35.0% | |
| !!! | TCCGGAGTCATTATTTTTGA+AGG | + | tig0009027:34990-35009 | Msa1346540:CDS | 35.0% |
| AATCCTCAAGCAATGATGTA+GGG | - | tig0009027:35038-35057 | None:intergenic | 35.0% | |
| TAATCCTCAAGCAATGATGT+AGG | - | tig0009027:35039-35058 | None:intergenic | 35.0% | |
| GATTACAAGCAAACCAACTA+TGG | + | tig0009027:35054-35073 | Msa1346540:CDS | 35.0% | |
| GTCTGTGAATGAAGAAGATA+GGG | + | tig0009027:35092-35111 | Msa1346540:CDS | 35.0% | |
| TCTGTGAATGAAGAAGATAG+GGG | + | tig0009027:35093-35112 | Msa1346540:CDS | 35.0% | |
| !! | TTGACACTGTTTTTCTGTTC+GGG | - | tig0009027:35122-35141 | None:intergenic | 35.0% |
| !! | GTTGACACTGTTTTTCTGTT+CGG | - | tig0009027:35123-35142 | None:intergenic | 35.0% |
| TCAAACCACCAAACTTGATT+TGG | + | tig0009027:35371-35390 | Msa1346540:intron | 35.0% | |
| ! | TTGGAACTTAAAGGTTCTGA+TGG | + | tig0009027:35437-35456 | Msa1346540:intron | 35.0% |
| TATTTATCCATTTCAGGGCT+TGG | + | tig0009027:35785-35804 | Msa1346540:intron | 35.0% | |
| GCTAAACTTCTATTGACACT+TGG | + | tig0009027:35816-35835 | Msa1346540:CDS | 35.0% | |
| AAACTTCTATTGACACTTGG+AGG | + | tig0009027:35819-35838 | Msa1346540:CDS | 35.0% | |
| AAAAAAATGCCACGGTTATG+AGG | - | tig0009027:35875-35894 | None:intergenic | 35.0% | |
| AAGAGCAGAAAAAAATGCCA+CGG | - | tig0009027:35883-35902 | None:intergenic | 35.0% | |
| ACAGAACACATTACATTAGC+TGG | - | tig0009027:35929-35948 | None:intergenic | 35.0% | |
| !! | TCTTAGTTTGCCAATTGAGT+TGG | - | tig0009027:36090-36109 | None:intergenic | 35.0% |
| ! | ATTTTCTGTTTGCGTCATGT+TGG | + | tig0009027:36477-36496 | Msa1346540:intron | 35.0% |
| TGAAGAATGAATGAGGATTG+AGG | - | tig0009027:36528-36547 | None:intergenic | 35.0% | |
| CTCAATGTGAAGAATGAATG+AGG | - | tig0009027:36535-36554 | None:intergenic | 35.0% | |
| !! | CTTGTATGAAATAGTGGACA+TGG | + | tig0009027:36565-36584 | Msa1346540:intron | 35.0% |
| ! | CATCTTCTAAGAGTGCATAA+GGG | - | tig0009027:36711-36730 | None:intergenic | 35.0% |
| ! | TCATCTTCTAAGAGTGCATA+AGG | - | tig0009027:36712-36731 | None:intergenic | 35.0% |
| ATGCACTCTTAGAAGATGAA+AGG | + | tig0009027:36713-36732 | Msa1346540:CDS | 35.0% | |
| TGAAAGGGAAAGTTGAGAGA+GGG | - | tig0009027:33912-33931 | None:intergenic | 40.0% | |
| ! | TCTAGGTTTCACTTCTAGAG+GGG | - | tig0009027:34668-34687 | None:intergenic | 40.0% |
| TTGAATCGCTCACACAAACA+CGG | + | tig0009027:34729-34748 | Msa1346540:intron | 40.0% | |
| ATTTGAATGTGGCCATGTGT+TGG | + | tig0009027:34800-34819 | Msa1346540:intron | 40.0% | |
| ! | TTTCAGATGGAAGGTGTGTT+CGG | - | tig0009027:34863-34882 | None:intergenic | 40.0% |
| ! | ACACCTTCCATCTGAAATGT+TGG | + | tig0009027:34866-34885 | Msa1346540:intron | 40.0% |
| TGTAGCACCAACATTTCAGA+TGG | - | tig0009027:34876-34895 | None:intergenic | 40.0% | |
| !! | GAAATGTTGGTGCTACATGT+AGG | + | tig0009027:34879-34898 | Msa1346540:intron | 40.0% |
| ATCCTCAAGCAATGATGTAG+GGG | - | tig0009027:35037-35056 | None:intergenic | 40.0% | |
| CTCTTCATCAACTCCATAGT+TGG | - | tig0009027:35070-35089 | None:intergenic | 40.0% | |
| !! | CAACTATGGAGTTGATGAAG+AGG | + | tig0009027:35068-35087 | Msa1346540:CDS | 40.0% |
| CGTCTGTGAATGAAGAAGAT+AGG | + | tig0009027:35091-35110 | Msa1346540:CDS | 40.0% | |
| AGTGTCAACCAATGTTGAGA+GGG | + | tig0009027:35134-35153 | Msa1346540:CDS | 40.0% | |
| GCATTGTTTGTTCTGCTCTA+AGG | + | tig0009027:35295-35314 | Msa1346540:intron | 40.0% | |
| AACAGCCAAATCAAGTTTGG+TGG | - | tig0009027:35379-35398 | None:intergenic | 40.0% | |
| ATGAGAATGGAGTTCTTCAG+CGG | - | tig0009027:35534-35553 | None:intergenic | 40.0% | |
| TACAGCTTACATGCTTCCTA+TGG | + | tig0009027:35740-35759 | Msa1346540:intron | 40.0% | |
| !! | TGATTTCTGGTGACTACCAT+AGG | - | tig0009027:35759-35778 | None:intergenic | 40.0% |
| ! | GTCAATAGAAGTTTAGCTCG+AGG | - | tig0009027:35813-35832 | None:intergenic | 40.0% |
| ACTTGGAGGAACATTCTTCT+TGG | + | tig0009027:35833-35852 | Msa1346540:CDS | 40.0% | |
| GGAACATTCTTCTTGGCATT+TGG | + | tig0009027:35840-35859 | Msa1346540:CDS | 40.0% | |
| TACTTAACACGCAAACGGTA+CGG | - | tig0009027:35959-35978 | None:intergenic | 40.0% | |
| CAGAACCTAACCAACTCAAT+TGG | + | tig0009027:36077-36096 | Msa1346540:intron | 40.0% | |
| !! | GTTTGCCAATTGAGTTGGTT+AGG | - | tig0009027:36085-36104 | None:intergenic | 40.0% |
| TTGTCTTCCCATCTATCCTA+TGG | + | tig0009027:36360-36379 | Msa1346540:intron | 40.0% | |
| ACTATCACCTCCACAATATG+TGG | + | tig0009027:36684-36703 | Msa1346540:CDS | 40.0% | |
| GTGAAAGGGAAAGTTGAGAG+AGG | - | tig0009027:33913-33932 | None:intergenic | 45.0% | |
| TCAACACTTCCAAGTCTTCC+AGG | + | tig0009027:34017-34036 | Msa1346540:CDS | 45.0% | |
| CAACACTTCCAAGTCTTCCA+GGG | + | tig0009027:34018-34037 | Msa1346540:CDS | 45.0% | |
| AGAACTACTACAACAGACCC+TGG | - | tig0009027:34038-34057 | None:intergenic | 45.0% | |
| GCACCAACATTTCAGATGGA+AGG | - | tig0009027:34872-34891 | None:intergenic | 45.0% | |
| TTGAAGGAGTTGAAGAGGAG+AGG | + | tig0009027:35006-35025 | Msa1346540:CDS | 45.0% | |
| CAGTGTCAACCAATGTTGAG+AGG | + | tig0009027:35133-35152 | Msa1346540:CDS | 45.0% | |
| GTGTCAACCAATGTTGAGAG+GGG | + | tig0009027:35135-35154 | Msa1346540:CDS | 45.0% | |
| GTCTAGAGAATCAGAGGGAA+CGG | + | tig0009027:35157-35176 | Msa1346540:CDS | 45.0% | |
| TAAGGGTCCACATATTGTGG+AGG | - | tig0009027:36694-36713 | None:intergenic | 45.0% | |
| GCATAAGGGTCCACATATTG+TGG | - | tig0009027:36697-36716 | None:intergenic | 45.0% | |
| GGATATCTCAGATAGCTCCT+CGG | + | tig0009027:36734-36753 | Msa1346540:CDS | 45.0% | |
| !!! | TTTTTTATATATATTATTGA+AGG | - | tig0009027:35233-35252 | None:intergenic | 5.0% |
| AGGGAAAGTTGAGAGAGGGT+TGG | - | tig0009027:33908-33927 | None:intergenic | 50.0% | |
| ACAACAGACCCTGGAAGACT+TGG | - | tig0009027:34029-34048 | None:intergenic | 50.0% | |
| AGCGGTGTGAAGCCATCAAA+AGG | - | tig0009027:34940-34959 | None:intergenic | 50.0% | |
| ATTCTCAGGAGAAGAGCCTC+CGG | + | tig0009027:34972-34991 | Msa1346540:intron | 50.0% | |
| GACCCCTACATCATTGCTTG+AGG | + | tig0009027:35032-35051 | Msa1346540:CDS | 50.0% | |
| CTCTAGACCCCTCTCAACAT+TGG | - | tig0009027:35145-35164 | None:intergenic | 50.0% | |
| AGAGGGGTCTAGAGAATCAG+AGG | + | tig0009027:35151-35170 | Msa1346540:CDS | 50.0% | |
| GAGGGGTCTAGAGAATCAGA+GGG | + | tig0009027:35152-35171 | Msa1346540:CDS | 50.0% | |
| GAATCAGAGGGAACGGTCTA+TGG | + | tig0009027:35164-35183 | Msa1346540:CDS | 50.0% | |
| ! | TCTATGGCGCTGAACAGTGA+AGG | + | tig0009027:35180-35199 | Msa1346540:CDS | 50.0% |
| GCTGAACAGTGAAGGTCTTG+AGG | + | tig0009027:35188-35207 | Msa1346540:CDS | 50.0% | |
| ACCGTTGATCCTCATAACCG+TGG | + | tig0009027:35863-35882 | Msa1346540:CDS | 50.0% | |
| GCCACGGTTATGAGGATCAA+CGG | - | tig0009027:35867-35886 | None:intergenic | 50.0% | |
| !! | GGACCAAGTTTTGTCCACGA+CGG | + | tig0009027:36649-36668 | Msa1346540:CDS | 50.0% |
| CTTCCGTCGTGGACAAAACT+TGG | - | tig0009027:36655-36674 | None:intergenic | 50.0% | |
| ! | CGAGGTACCAAGCCCTGAAA+TGG | - | tig0009027:35795-35814 | None:intergenic | 55.0% |
| GTGACATCTTGCTTCCGTCG+TGG | - | tig0009027:36666-36685 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0009027 | gene | 33890 | 36765 | 33890 | ID=Msa1346540;Name=Msa1346540 |
| tig0009027 | mRNA | 33890 | 36765 | 33890 | ID=Msa1346540-mRNA-1;Parent=Msa1346540;Name=Msa1346540-mRNA-1;_AED=0.03;_eAED=0.05;_QI=0|0|0|1|0.66|0.75|4|0|206 |
| tig0009027 | exon | 33890 | 34049 | 33890 | ID=Msa1346540-mRNA-1:exon:5529;Parent=Msa1346540-mRNA-1 |
| tig0009027 | exon | 34980 | 35209 | 34980 | ID=Msa1346540-mRNA-1:exon:5530;Parent=Msa1346540-mRNA-1 |
| tig0009027 | exon | 35801 | 35908 | 35801 | ID=Msa1346540-mRNA-1:exon:5531;Parent=Msa1346540-mRNA-1 |
| tig0009027 | exon | 36643 | 36765 | 36643 | ID=Msa1346540-mRNA-1:exon:5532;Parent=Msa1346540-mRNA-1 |
| tig0009027 | CDS | 33890 | 34049 | 33890 | ID=Msa1346540-mRNA-1:cds;Parent=Msa1346540-mRNA-1 |
| tig0009027 | CDS | 34980 | 35209 | 34980 | ID=Msa1346540-mRNA-1:cds;Parent=Msa1346540-mRNA-1 |
| tig0009027 | CDS | 35801 | 35908 | 35801 | ID=Msa1346540-mRNA-1:cds;Parent=Msa1346540-mRNA-1 |
| tig0009027 | CDS | 36643 | 36765 | 36643 | ID=Msa1346540-mRNA-1:cds;Parent=Msa1346540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
