AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0509540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509540 MtrunA17_Chr3g0114541 98.347 363 6 0 1 363 1 363 0.0 742
Msa0509540 MtrunA17_Chr8g0386821 32.314 229 137 5 122 340 132 352 1.01e-23 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509540 AT3G10970.1 74.857 350 83 3 19 363 16 365 0.0 531
Msa0509540 AT3G10970.2 74.857 350 83 3 19 363 16 365 0.0 530
Msa0509540 AT3G10970.3 74.571 350 83 4 19 363 16 364 0.0 525
Msa0509540 AT4G11570.1 28.571 231 158 4 122 346 129 358 7.98e-23 98.6
Msa0509540 AT4G11570.2 28.571 231 158 4 122 346 129 358 7.98e-23 98.6

Find 120 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAATTTGGTTCTCTTAA+TGG 0.126410 3_4:-57958048 Msa0509540:CDS
TTAATTGCCCGTTGCACTTC+TGG 0.148824 3_4:-57958075 Msa0509540:CDS
CTCTTGCACGAAAAGTTTAT+TGG 0.176220 3_4:+57958011 None:intergenic
CAGGCTATTGGTGCTGAATA+TGG 0.193680 3_4:-57957870 Msa0509540:CDS
TAACAAGGGCTCTACATTTA+TGG 0.213964 3_4:-57954433 Msa0509540:CDS
GTCTATTCCAAGTCTCCTTT+TGG 0.218068 3_4:+57954377 None:intergenic
ACTTCTGGGTCTGATGAATT+TGG 0.221250 3_4:-57958060 Msa0509540:CDS
TTTCTTCAATTTCAGGCTAT+TGG 0.255793 3_4:-57957882 Msa0509540:intron
CACATAGACGTTTGGAGAAC+CGG 0.271431 3_4:+57954188 None:intergenic
GATTTAATTACAAGGAAAAT+TGG 0.283854 3_4:+57954302 None:intergenic
CTTATGGTCTTATCTTCTCT+TGG 0.300062 3_4:-57957634 Msa0509540:CDS
TCTTCTACTTCTCTCTTGTT+CGG 0.305992 3_4:-57958346 Msa0509540:five_prime_UTR
CTTCTACTTCTCTCTTGTTC+GGG 0.308712 3_4:-57958345 Msa0509540:five_prime_UTR
GGGGCTCGATAAGTACTTTC+AGG 0.308820 3_4:-57956012 Msa0509540:intron
GAAAACCTGCAGGTATGATT+TGG 0.315256 3_4:-57954523 Msa0509540:intron
GACTAGAGGAAATAGGAATT+TGG 0.332643 3_4:+57954101 None:intergenic
AAAACCTGCAGGTATGATTT+GGG 0.334866 3_4:-57954522 Msa0509540:intron
CAAGCGAACATGACAAATAA+TGG 0.354763 3_4:+57953991 None:intergenic
TTTATTGACAGTTTAAAATC+AGG 0.360402 3_4:+57954270 None:intergenic
TGCTGATAATGTATTGAATA+AGG 0.363742 3_4:-57956474 Msa0509540:intron
TAATTGCCCGTTGCACTTCT+GGG 0.368901 3_4:-57958074 Msa0509540:CDS
TTATGGTCTTATCTTCTCTT+GGG 0.375589 3_4:-57957633 Msa0509540:CDS
TTTCAGAAATTTAAGCGGTT+GGG 0.375742 3_4:-57958114 Msa0509540:intron
AGGCTATTGGTGCTGAATAT+GGG 0.386192 3_4:-57957869 Msa0509540:CDS
TCTTGCACGAAAAGTTTATT+GGG 0.386399 3_4:+57958012 None:intergenic
CTTTCAATATCAGCATCTTC+AGG 0.388650 3_4:+57956515 None:intergenic
CAATGGAGGGCTTGAAAGAC+TGG 0.407099 3_4:-57956121 Msa0509540:CDS
GAGGTAACTAAATTAGAAAA+TGG 0.416310 3_4:+57954353 None:intergenic
TACAGAAAGTTCACTGAAGT+TGG 0.419550 3_4:+57954479 None:intergenic
CTGTTGTTTCAAGTCTTGAT+AGG 0.428640 3_4:-57956064 Msa0509540:CDS
ACGCAACAACGTTGTTGTTA+CGG 0.430129 3_4:+57958320 None:intergenic
GTAGAAGCTTTGCAACGAAT+GGG 0.430717 3_4:-57956032 Msa0509540:CDS
GAAAGGTTAATGCTTAATAC+AGG 0.434222 3_4:-57956497 Msa0509540:CDS
AGGAAAATTGGCAGAGAGGA+GGG 0.436993 3_4:+57954314 None:intergenic
GGAAAATTGGCAGAGAGGAG+GGG 0.440858 3_4:+57954315 None:intergenic
ATGAAGCCAGATGAGGCTTA+TGG 0.441585 3_4:-57957650 Msa0509540:CDS
TTCTCCTTCTCCCAATTCAA+TGG 0.455896 3_4:-57958209 Msa0509540:intron
ATAAGACCATAAGCCTCATC+TGG 0.458482 3_4:+57957644 None:intergenic
GAAATTTAAGCGGTTGGGGT+TGG 0.462374 3_4:-57958109 Msa0509540:CDS
ATGAGAAGTAGCTCTGCAAT+TGG 0.466015 3_4:+57958267 None:intergenic
CAATGCCCTCCCCTTCCCTT+AGG 0.469922 3_4:-57954161 Msa0509540:three_prime_UTR
CGAAGCAATCTGCTGTCCTA+AGG 0.470634 3_4:+57954145 None:intergenic
ATCAGACCCAGAAGTGCAAC+GGG 0.470650 3_4:+57958068 None:intergenic
GAAAATTGGCAGAGAGGAGG+GGG 0.472637 3_4:+57954316 None:intergenic
GTCGGGTGACTAGAGGAAAT+AGG 0.475681 3_4:+57954094 None:intergenic
TTCAGAAATTTAAGCGGTTG+GGG 0.479959 3_4:-57958113 Msa0509540:intron
GGGCTCTACATTTATGGACT+TGG 0.483174 3_4:-57954427 Msa0509540:CDS
AGACGAGAAGGGTGAGAGAG+AGG 0.486734 3_4:+57958238 None:intergenic
GGAGAAGATTGAAGACGAGA+AGG 0.491517 3_4:+57958226 None:intergenic
GAGGAGACTGTTTGCTAACA+AGG 0.492526 3_4:-57954448 Msa0509540:CDS
ATGATGGCTGTAGCATTGAT+TGG 0.493659 3_4:-57954768 Msa0509540:CDS
CTTGAAAGACTGGTTGGAAG+CGG 0.496286 3_4:-57956111 Msa0509540:CDS
ATTGCGTCCACATAGACGTT+TGG 0.500050 3_4:+57954180 None:intergenic
ATTTCTTTCTGCTGCTGTCA+AGG 0.509159 3_4:-57955505 Msa0509540:intron
GGTTGGGGTTGGTTAAGAAT+CGG 0.514034 3_4:-57958098 Msa0509540:CDS
GGTAGAAGCTTTGCAACGAA+TGG 0.518335 3_4:-57956033 Msa0509540:CDS
CCGACAGACGTTCTCATGTC+GGG 0.519015 3_4:-57954076 Msa0509540:three_prime_UTR
TAGATAAGAATCCTCCCAAA+AGG 0.520439 3_4:-57954392 Msa0509540:CDS
GAGAAGATTGAAGACGAGAA+GGG 0.520872 3_4:+57958227 None:intergenic
CAGTCTTTCAAGCCCTCCAT+TGG 0.521157 3_4:+57956122 None:intergenic
AATCCTCCCAAAAGGAGACT+TGG 0.522823 3_4:-57954384 Msa0509540:CDS
TTGAATGATAAGTTACAAGA+TGG 0.526065 3_4:-57957698 Msa0509540:CDS
TACCCTCTTCAGAGGCAAGT+TGG 0.529248 3_4:+57956746 None:intergenic
TGCTGTCCTAAGGGAAGGGG+AGG 0.531897 3_4:+57954155 None:intergenic
CTGAAGATGCTGATATTGAA+AGG 0.531900 3_4:-57956514 Msa0509540:CDS
CCGACATGAGAACGTCTGTC+GGG 0.532219 3_4:+57954077 None:intergenic
CCCGACATGAGAACGTCTGT+CGG 0.532352 3_4:+57954076 None:intergenic
TATCTTCTCTTGGGATAATG+TGG 0.533521 3_4:-57957624 Msa0509540:CDS
AAAATGCCTTGTAGCTTGAT+CGG 0.536912 3_4:-57954857 Msa0509540:intron
TGCATAATGATTTAATTACA+AGG 0.537289 3_4:+57954294 None:intergenic
GCAATTGTTACAGAGGAGGA+TGG 0.538826 3_4:-57955549 Msa0509540:CDS
TAATAAGGAAGAAAGTGAGC+TGG 0.541171 3_4:-57956293 Msa0509540:CDS
CGGTTCTCCAAACGTCTATG+TGG 0.543911 3_4:-57954187 Msa0509540:three_prime_UTR
ATCTGCTGTCCTAAGGGAAG+GGG 0.544313 3_4:+57954152 None:intergenic
GGAGGGCTTGAAAGACTGGT+TGG 0.545375 3_4:-57956117 Msa0509540:CDS
TGTACCATTGAATTGGGAGA+AGG 0.553571 3_4:+57958205 None:intergenic
CAATCTGCTGTCCTAAGGGA+AGG 0.554150 3_4:+57954150 None:intergenic
AACTTTCTGTAATCAACTTG+AGG 0.558287 3_4:-57954467 Msa0509540:CDS
TGCGCACAATTGCACAATGA+TGG 0.558831 3_4:-57954784 Msa0509540:CDS
AAGGAAAATTGGCAGAGAGG+AGG 0.565484 3_4:+57954313 None:intergenic
AAGACTTGAAACAACAGCAC+AGG 0.566512 3_4:+57956070 None:intergenic
TGTTACAGAGGAGGATGGGA+TGG 0.569897 3_4:-57955544 Msa0509540:CDS
CTTCTCTTGGGATAATGTGG+TGG 0.570792 3_4:-57957621 Msa0509540:intron
GGCTATTGGTGCTGAATATG+GGG 0.570817 3_4:-57957868 Msa0509540:CDS
GTCATGTTCGCTTGATGTGG+CGG 0.571886 3_4:-57953982 Msa0509540:three_prime_UTR
GAAGCAATCTGCTGTCCTAA+GGG 0.574991 3_4:+57954146 None:intergenic
GAGCTCTGAAGAGGAAGGCA+TGG 0.579417 3_4:-57956771 Msa0509540:CDS
AGCTGGATAGACTGAAGTTG+AGG 0.579443 3_4:-57956276 Msa0509540:CDS
CTTACCACATCAACTTTCAA+CGG 0.581754 3_4:+57957816 None:intergenic
ACATAGACGTTTGGAGAACC+GGG 0.582407 3_4:+57954189 None:intergenic
TTTGTCATGTTCGCTTGATG+TGG 0.582506 3_4:-57953985 Msa0509540:three_prime_UTR
TTAGGCAATTGTTACAGAGG+AGG 0.584743 3_4:-57955553 Msa0509540:intron
CAATTGTTACAGAGGAGGAT+GGG 0.588885 3_4:-57955548 Msa0509540:CDS
GAACCAACTTGCCTCTGAAG+AGG 0.589009 3_4:-57956749 Msa0509540:CDS
CTAGCTTGAAAGACCAATGG+AGG 0.590403 3_4:-57956135 Msa0509540:intron
TCGGAAACCTTCCAAGTGTG+TGG 0.592930 3_4:-57954838 Msa0509540:CDS
AATCTGCTGTCCTAAGGGAA+GGG 0.595012 3_4:+57954151 None:intergenic
CATCAGACCCAGAAGTGCAA+CGG 0.596190 3_4:+57958067 None:intergenic
TGTCTAGCTTGAAAGACCAA+TGG 0.604162 3_4:-57956138 Msa0509540:intron
AAACCTGCAGGTATGATTTG+GGG 0.605389 3_4:-57954521 Msa0509540:intron
CTGATACTCGAGCTCTGAAG+AGG 0.607439 3_4:-57956780 Msa0509540:CDS
CTATGCTATGAAGCCAGATG+AGG 0.608639 3_4:-57957657 Msa0509540:CDS
AGACTTGAAACAACAGCACA+GGG 0.613515 3_4:+57956071 None:intergenic
TGCGCAGCAGTTACTGCTCG+AGG 0.613905 3_4:+57954801 None:intergenic
TACTCGAGCTCTGAAGAGGA+AGG 0.615626 3_4:-57956776 Msa0509540:CDS
AACCAACTTGCCTCTGAAGA+GGG 0.616443 3_4:-57956748 Msa0509540:intron
TACAAGGAAAATTGGCAGAG+AGG 0.623519 3_4:+57954310 None:intergenic
GATTAACATACCCTCTTCAG+AGG 0.624343 3_4:+57956738 None:intergenic
AGGAGACTGTTTGCTAACAA+GGG 0.627993 3_4:-57954447 Msa0509540:CDS
ATTGGTGCTGAATATGGGGA+AGG 0.632973 3_4:-57957864 Msa0509540:CDS
AACGTCTGTCGGGTGACTAG+AGG 0.634206 3_4:+57954087 None:intergenic
CCCGACAGACGTTCTCATGT+CGG 0.635347 3_4:-57954077 Msa0509540:three_prime_UTR
GCTGTCCTAAGGGAAGGGGA+GGG 0.648834 3_4:+57954156 None:intergenic
TCTGCAATTGGAGAAAGTAG+TGG 0.658939 3_4:+57958279 None:intergenic
AGTCGAGTATGGCAAATCTG+TGG 0.660747 3_4:-57954024 Msa0509540:three_prime_UTR
TAGCTTGAAAGACCAATGGA+GGG 0.664389 3_4:-57956134 Msa0509540:CDS
TAGAAGCTTTGCAACGAATG+GGG 0.667490 3_4:-57956031 Msa0509540:CDS
AAAATTGGCAGAGAGGAGGG+GGG 0.689199 3_4:+57954317 None:intergenic
TGGACCGTTGAAAGTTGATG+TGG 0.704990 3_4:-57957820 Msa0509540:intron
GACTTGAAACAACAGCACAG+GGG 0.781371 3_4:+57956072 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG - chr3_4:57954803-57954822 Msa0509540:CDS 0.0%
!! TAAATTAATTATATTATAAT+TGG + chr3_4:57956515-57956534 None:intergenic 0.0%
!!! GTTATCATAAATGAATTTTT+TGG - chr3_4:57954584-57954603 Msa0509540:intron 15.0%
!!! ATTTTTCAGTGTTTAATTTA+AGG - chr3_4:57954874-57954893 Msa0509540:intron 15.0%
!!! TTTGGTAATAATTTAAGAAA+TGG - chr3_4:57955035-57955054 Msa0509540:intron 15.0%
!! TTTATGACAAGATTTATTAT+AGG - chr3_4:57956646-57956665 Msa0509540:intron 15.0%
!! TTATGACAAGATTTATTATA+GGG - chr3_4:57956647-57956666 Msa0509540:intron 15.0%
!! AAATATAGGATAATTACATT+TGG - chr3_4:57956986-57957005 Msa0509540:intron 15.0%
!! AATATAGGATAATTACATTT+GGG - chr3_4:57956987-57957006 Msa0509540:intron 15.0%
!! AAAAATTGTACCATTGAATT+GGG + chr3_4:57954169-57954188 None:intergenic 20.0%
!!! GTTAAAGAGTGTTTTTTTAT+TGG - chr3_4:57954442-57954461 Msa0509540:CDS 20.0%
!!! TGGTAATTTTTGTTGAAAAT+AGG - chr3_4:57954639-57954658 Msa0509540:intron 20.0%
!!! TGGTAAGTTATTTTAATTCA+TGG - chr3_4:57954764-57954783 Msa0509540:CDS 20.0%
!! TAATTATATTATAATTGGCC+AGG + chr3_4:57956510-57956529 None:intergenic 20.0%
!! ATTATTTGGGGATAATATTA+TGG + chr3_4:57957325-57957344 None:intergenic 20.0%
!! AAAAATTAGCAGCAAATTAT+TGG + chr3_4:57957475-57957494 None:intergenic 20.0%
!! ATTTGATGTTATTAACTCAA+CGG + chr3_4:57957727-57957746 None:intergenic 20.0%
!! AAGTGTTCATTTCAATATAA+GGG + chr3_4:57957760-57957779 None:intergenic 20.0%
!!! AAAGTGTTCATTTCAATATA+AGG + chr3_4:57957761-57957780 None:intergenic 20.0%
!!! GTATGTAACTATTATTCTTT+TGG - chr3_4:57957797-57957816 Msa0509540:intron 20.0%
!! GATTTAATTACAAGGAAAAT+TGG + chr3_4:57958066-57958085 None:intergenic 20.0%
!! TGCATAATGATTTAATTACA+AGG + chr3_4:57958074-57958093 None:intergenic 20.0%
!!! TTTATTGACAGTTTAAAATC+AGG + chr3_4:57958098-57958117 None:intergenic 20.0%
!! AAAAAATTATGTAGAACAGA+AGG + chr3_4:57958149-57958168 None:intergenic 20.0%
! CAAAAATTGTACCATTGAAT+TGG + chr3_4:57954170-57954189 None:intergenic 25.0%
!!! CTTGTTTTCAGAAATTTAAG+CGG - chr3_4:57954246-57954265 Msa0509540:three_prime_UTR 25.0%
!! TGTAATTGATGATTGAAGTA+TGG - chr3_4:57954619-57954638 Msa0509540:intron 25.0%
! TTGAATGATAAGTTACAAGA+TGG - chr3_4:57954667-57954686 Msa0509540:intron 25.0%
! ATGTAATATGTGAATTGATC+TGG - chr3_4:57954947-57954966 Msa0509540:intron 25.0%
! GATCAAAATAACATTAGTGT+TGG - chr3_4:57955062-57955081 Msa0509540:intron 25.0%
! GTGTAAAAGTTCAGAAAAAA+GGG - chr3_4:57955321-57955340 Msa0509540:intron 25.0%
! ATGAGTTATTGCTTATTATC+TGG - chr3_4:57955538-57955557 Msa0509540:CDS 25.0%
!!! ACTACATGAGAAAGTATTAA+AGG - chr3_4:57955746-57955765 Msa0509540:intron 25.0%
!! TGCTGATAATGTATTGAATA+AGG - chr3_4:57955891-57955910 Msa0509540:intron 25.0%
! ATGTATTGAATAAGGTTAGT+TGG - chr3_4:57955899-57955918 Msa0509540:intron 25.0%
!! AAGTTTGAGATTTCTAACAA+TGG + chr3_4:57955992-57956011 None:intergenic 25.0%
! ATTGTTAGAAATCTCAAACT+TGG - chr3_4:57955991-57956010 Msa0509540:intron 25.0%
! AGTTATATGCTATATACATC+AGG + chr3_4:57956206-57956225 None:intergenic 25.0%
! AAGTCTTGATAGGAAAAATA+TGG - chr3_4:57956311-57956330 Msa0509540:intron 25.0%
!! ATCTACTATAGTTTGAGTTA+TGG - chr3_4:57956562-57956581 Msa0509540:intron 25.0%
! AATTGCCTAAAAAACCAATA+AGG + chr3_4:57956802-57956821 None:intergenic 25.0%
! ATCAACATACAATATACAAG+TGG + chr3_4:57956893-57956912 None:intergenic 25.0%
! ATTAGTAAATAGCAATACTG+AGG - chr3_4:57957030-57957049 Msa0509540:intron 25.0%
! ATGTTTCATCATTACTACAT+AGG + chr3_4:57957082-57957101 None:intergenic 25.0%
!! TATTTTCCTTTTCAAAGATG+TGG - chr3_4:57957200-57957219 Msa0509540:intron 25.0%
!! ATTTTCCTTTTCAAAGATGT+GGG - chr3_4:57957201-57957220 Msa0509540:intron 25.0%
!!! AGTTTTAAAGGTCAAGTTAA+TGG - chr3_4:57957235-57957254 Msa0509540:intron 25.0%
! AAATAATTCCAAGTTGTACT+AGG + chr3_4:57957296-57957315 None:intergenic 25.0%
!! AGTACAACTTGGAATTATTT+TGG - chr3_4:57957296-57957315 Msa0509540:intron 25.0%
! ATTAGCAGCAACAATTATTT+GGG + chr3_4:57957338-57957357 None:intergenic 25.0%
! GAAGAATGAGAAAGAATTTA+TGG + chr3_4:57957453-57957472 None:intergenic 25.0%
! AGTGTTCATTTCAATATAAG+GGG + chr3_4:57957759-57957778 None:intergenic 25.0%
! GAGGTAACTAAATTAGAAAA+TGG + chr3_4:57958015-57958034 None:intergenic 25.0%
!!! CATAATTTTTTTTGTTCTCC+CGG - chr3_4:57958158-57958177 Msa0509540:intron 25.0%
! TTTTCAGAAATTTAAGCGGT+TGG - chr3_4:57954250-57954269 Msa0509540:three_prime_UTR 30.0%
TTTCAGAAATTTAAGCGGTT+GGG - chr3_4:57954251-57954270 Msa0509540:three_prime_UTR 30.0%
!! GATGAATTTGGTTCTCTTAA+TGG - chr3_4:57954317-57954336 Msa0509540:three_prime_UTR 30.0%
TCTTGCACGAAAAGTTTATT+GGG + chr3_4:57954356-57954375 None:intergenic 30.0%
AAGAAACAACATCAAACACA+TGG + chr3_4:57954469-57954488 None:intergenic 30.0%
!! GATGTTGTTTCTTCAATTTC+AGG - chr3_4:57954476-57954495 Msa0509540:CDS 30.0%
TTTCTTCAATTTCAGGCTAT+TGG - chr3_4:57954483-57954502 Msa0509540:CDS 30.0%
!! GGAAGGATTTGAAACTTTTA+GGG - chr3_4:57954518-57954537 Msa0509540:intron 30.0%
!! TTATGGTCTTATCTTCTCTT+GGG - chr3_4:57954732-57954751 Msa0509540:intron 30.0%
AGTTATGCAAATTGAGTTTC+TGG - chr3_4:57954904-57954923 Msa0509540:intron 30.0%
ACAAAAAACACAGATACTAC+TGG - chr3_4:57955172-57955191 Msa0509540:intron 30.0%
!!! TGAGTTTTGACTTAAGATTG+TGG + chr3_4:57955202-57955221 None:intergenic 30.0%
GGTGTAAAAGTTCAGAAAAA+AGG - chr3_4:57955320-57955339 Msa0509540:intron 30.0%
ATAGAGTATACAAGAAGACA+AGG - chr3_4:57955389-57955408 Msa0509540:intron 30.0%
! AGACAAACTTTTACAACTGT+TGG - chr3_4:57955455-57955474 Msa0509540:intron 30.0%
CTTATTATCTGGTAACTGAA+TGG - chr3_4:57955549-57955568 Msa0509540:CDS 30.0%
! AACTGAATGGAATTTGTTTC+AGG - chr3_4:57955562-57955581 Msa0509540:intron 30.0%
ATGGATGGAACAACAATTAA+AGG - chr3_4:57955712-57955731 Msa0509540:intron 30.0%
GTTGTATAACATTTCTATGC+AGG - chr3_4:57955817-57955836 Msa0509540:intron 30.0%
ATAACATTTCTATGCAGGAA+AGG - chr3_4:57955822-57955841 Msa0509540:intron 30.0%
GAAAGGTTAATGCTTAATAC+AGG - chr3_4:57955868-57955887 Msa0509540:intron 30.0%
AGAGAAAATGCTGCAAATTA+AGG + chr3_4:57956051-57956070 None:intergenic 30.0%
GCTATTATTTAGTGTCTTGA+TGG - chr3_4:57956174-57956193 Msa0509540:intron 30.0%
!!! TTTCAGGTTGGTAACATTTT+AGG - chr3_4:57956369-57956388 Msa0509540:intron 30.0%
! GAGTTATGGTCAGTATATTT+TGG - chr3_4:57956576-57956595 Msa0509540:intron 30.0%
!! ATTTAGTTCTAGCCATAAAG+AGG + chr3_4:57956719-57956738 None:intergenic 30.0%
!!! GATTGCCTTATTGGTTTTTT+AGG - chr3_4:57956794-57956813 Msa0509540:intron 30.0%
!! TTTTTAGGCAATTGTTACAG+AGG - chr3_4:57956809-57956828 Msa0509540:intron 30.0%
TTAGCAGCAACAATTATTTG+GGG + chr3_4:57957337-57957356 None:intergenic 30.0%
CATTAGCAGCAACAATTATT+TGG + chr3_4:57957339-57957358 None:intergenic 30.0%
CAAATAATTGTTGCTGCTAA+TGG - chr3_4:57957337-57957356 Msa0509540:intron 30.0%
GATTATTGAGATGTTGCATT+TGG - chr3_4:57957382-57957401 Msa0509540:intron 30.0%
! ATGTTTCCACAGCTAATTTT+CGG - chr3_4:57957418-57957437 Msa0509540:intron 30.0%
ATGTACTTGAGTATGTTTCA+TGG + chr3_4:57957698-57957717 None:intergenic 30.0%
! TTTTGGCATTTAGAAACTGA+TGG - chr3_4:57957814-57957833 Msa0509540:intron 30.0%
AACTTTCTGTAATCAACTTG+AGG - chr3_4:57957898-57957917 Msa0509540:intron 30.0%
! TGAAAAGAAGCAACTTTTGT+TGG + chr3_4:57958317-57958336 None:intergenic 30.0%
!!! GATGTTTTTTGCTGCAGTTT+TGG + chr3_4:57953995-57954014 None:intergenic 35.0%
TCTTCTACTTCTCTCTTGTT+CGG - chr3_4:57954019-57954038 Msa0509540:three_prime_UTR 35.0%
TTCAGAAATTTAAGCGGTTG+GGG - chr3_4:57954252-57954271 Msa0509540:three_prime_UTR 35.0%
CTCTTGCACGAAAAGTTTAT+TGG + chr3_4:57954357-57954376 None:intergenic 35.0%
! CAATAAACTTTTCGTGCAAG+AGG - chr3_4:57954355-57954374 Msa0509540:exon 35.0%
!! GGGAAGGATTTGAAACTTTT+AGG - chr3_4:57954517-57954536 Msa0509540:intron 35.0%
!!! TTTGAAACTTTTAGGGCAGA+TGG - chr3_4:57954525-57954544 Msa0509540:intron 35.0%
CTTACCACATCAACTTTCAA+CGG + chr3_4:57954552-57954571 None:intergenic 35.0%
!! CTTATGGTCTTATCTTCTCT+TGG - chr3_4:57954731-57954750 Msa0509540:intron 35.0%
TATCTTCTCTTGGGATAATG+TGG - chr3_4:57954741-57954760 Msa0509540:intron 35.0%
ATTGCAATGAAACACAAGCA+TGG - chr3_4:57954979-57954998 Msa0509540:intron 35.0%
! CAGTATTTCTGTGTCTGTAT+TGG - chr3_4:57955299-57955318 Msa0509540:intron 35.0%
TGATTGAGTTTGTACTGTGT+AGG - chr3_4:57955654-57955673 Msa0509540:intron 35.0%
!!! TGATTTTTAGCATGCCCTTT+TGG - chr3_4:57955689-57955708 Msa0509540:intron 35.0%
CTTTCAATATCAGCATCTTC+AGG + chr3_4:57955853-57955872 None:intergenic 35.0%
CTGAAGATGCTGATATTGAA+AGG - chr3_4:57955851-57955870 Msa0509540:intron 35.0%
! GCAGCATTTTCTCTCTAATA+AGG - chr3_4:57956057-57956076 Msa0509540:CDS 35.0%
TAATAAGGAAGAAAGTGAGC+TGG - chr3_4:57956072-57956091 Msa0509540:CDS 35.0%
!! CTGTTGTTTCAAGTCTTGAT+AGG - chr3_4:57956301-57956320 Msa0509540:CDS 35.0%
!! GCTTTTAACTGACGTGATAT+GGG + chr3_4:57956425-57956444 None:intergenic 35.0%
!! TGCTTTTAACTGACGTGATA+TGG + chr3_4:57956426-57956445 None:intergenic 35.0%
!! TTATGTAGTTTGTTGAGTGC+TGG - chr3_4:57956532-57956551 Msa0509540:intron 35.0%
TTTCACGAGTAAATCCAACT+TGG - chr3_4:57956693-57956712 Msa0509540:intron 35.0%
GGCAAATTCATGATTGTGTT+AGG + chr3_4:57956768-57956787 None:intergenic 35.0%
ACCAATAAGGCAATCGAAAA+TGG + chr3_4:57956789-57956808 None:intergenic 35.0%
! TTCTTGTAGTTTGAAGTCGA+AGG - chr3_4:57957116-57957135 Msa0509540:intron 35.0%
! TCTTGTAGTTTGAAGTCGAA+GGG - chr3_4:57957117-57957136 Msa0509540:intron 35.0%
TTGTTCAGTGCAAACTAAGA+TGG - chr3_4:57957167-57957186 Msa0509540:intron 35.0%
TGTTCAGTGCAAACTAAGAT+GGG - chr3_4:57957168-57957187 Msa0509540:intron 35.0%
!!! GCTGAGTGATGTAGTTTTAA+AGG - chr3_4:57957223-57957242 Msa0509540:intron 35.0%
TAGAGTTTCCTAGTACAACT+TGG - chr3_4:57957285-57957304 Msa0509540:intron 35.0%
!!! TTGCATTTGGTGTCTTTTGT+GGG - chr3_4:57957395-57957414 Msa0509540:intron 35.0%
! TGTTTCCACAGCTAATTTTC+GGG - chr3_4:57957419-57957438 Msa0509540:intron 35.0%
!! ATCAAGCTACAAGGCATTTT+AGG + chr3_4:57957508-57957527 None:intergenic 35.0%
AAAATGCCTTGTAGCTTGAT+CGG - chr3_4:57957508-57957527 Msa0509540:intron 35.0%
ATCTTCAAAAACCACACACT+TGG + chr3_4:57957541-57957560 None:intergenic 35.0%
AAAACCTGCAGGTATGATTT+GGG - chr3_4:57957843-57957862 Msa0509540:CDS 35.0%
TACAGAAAGTTCACTGAAGT+TGG + chr3_4:57957889-57957908 None:intergenic 35.0%
TAACAAGGGCTCTACATTTA+TGG - chr3_4:57957932-57957951 Msa0509540:intron 35.0%
TAGATAAGAATCCTCCCAAA+AGG - chr3_4:57957973-57957992 Msa0509540:intron 35.0%
! TCTATTCCAAGTCTCCTTTT+GGG + chr3_4:57957990-57958009 None:intergenic 35.0%
GACTAGAGGAAATAGGAATT+TGG + chr3_4:57958267-57958286 None:intergenic 35.0%
! CTTTTCATTGTAGTCGAGTA+TGG - chr3_4:57958330-57958349 Msa0509540:five_prime_UTR 35.0%
CAAGCGAACATGACAAATAA+TGG + chr3_4:57958377-57958396 None:intergenic 35.0%
CTTCTACTTCTCTCTTGTTC+GGG - chr3_4:57954020-57954039 Msa0509540:three_prime_UTR 40.0%
! ACGCAACAACGTTGTTGTTA+CGG + chr3_4:57954048-57954067 None:intergenic 40.0%
TCTGCAATTGGAGAAAGTAG+TGG + chr3_4:57954089-57954108 None:intergenic 40.0%
! ATGAGAAGTAGCTCTGCAAT+TGG + chr3_4:57954101-57954120 None:intergenic 40.0%
GAGAAGATTGAAGACGAGAA+GGG + chr3_4:57954141-57954160 None:intergenic 40.0%
TTCTCCTTCTCCCAATTCAA+TGG - chr3_4:57954156-57954175 Msa0509540:three_prime_UTR 40.0%
TGTACCATTGAATTGGGAGA+AGG + chr3_4:57954163-57954182 None:intergenic 40.0%
ACTTCTGGGTCTGATGAATT+TGG - chr3_4:57954305-57954324 Msa0509540:three_prime_UTR 40.0%
!! AGGCTATTGGTGCTGAATAT+GGG - chr3_4:57954496-57954515 Msa0509540:CDS 40.0%
!! CGTTGAAAGTTGATGTGGTA+AGG - chr3_4:57954550-57954569 Msa0509540:intron 40.0%
ATAAGACCATAAGCCTCATC+TGG + chr3_4:57954724-57954743 None:intergenic 40.0%
ATGAAACACAAGCATGGACA+CGG - chr3_4:57954985-57955004 Msa0509540:intron 40.0%
!! CATTAGTGTTGGTATTGTGC+CGG - chr3_4:57955073-57955092 Msa0509540:intron 40.0%
GATTAACATACCCTCTTCAG+AGG + chr3_4:57955630-57955649 None:intergenic 40.0%
TGTACTGTGTAGGACTTAGA+TGG - chr3_4:57955664-57955683 Msa0509540:intron 40.0%
! TTTTAGCATGCCCTTTTGGA+TGG - chr3_4:57955693-57955712 Msa0509540:intron 40.0%
GTTGTTCCATCCATCCAAAA+GGG + chr3_4:57955706-57955725 None:intergenic 40.0%
TGTTGTTCCATCCATCCAAA+AGG + chr3_4:57955707-57955726 None:intergenic 40.0%
!! GTTTCCTTGATTTGTTGCGA+TGG - chr3_4:57956152-57956171 Msa0509540:intron 40.0%
ATAGCCATCGCAACAAATCA+AGG + chr3_4:57956159-57956178 None:intergenic 40.0%
! TGTCTAGCTTGAAAGACCAA+TGG - chr3_4:57956227-57956246 Msa0509540:intron 40.0%
TAGCTTGAAAGACCAATGGA+GGG - chr3_4:57956231-57956250 Msa0509540:intron 40.0%
AGACTTGAAACAACAGCACA+GGG + chr3_4:57956297-57956316 None:intergenic 40.0%
AAGACTTGAAACAACAGCAC+AGG + chr3_4:57956298-57956317 None:intergenic 40.0%
GTAGAAGCTTTGCAACGAAT+GGG - chr3_4:57956333-57956352 Msa0509540:intron 40.0%
TAGAAGCTTTGCAACGAATG+GGG - chr3_4:57956334-57956353 Msa0509540:intron 40.0%
! CTCGATAAGTACTTTCAGGT+TGG - chr3_4:57956357-57956376 Msa0509540:intron 40.0%
! CACGTCAGTTAAAAGCATGT+TGG - chr3_4:57956429-57956448 Msa0509540:intron 40.0%
ATTCAAAGAGCAGAAGATCC+TGG - chr3_4:57956489-57956508 Msa0509540:CDS 40.0%
AATCCAACTTGGCCTCTTTA+TGG - chr3_4:57956704-57956723 Msa0509540:intron 40.0%
!! GCCATTTTCGATTGCCTTAT+TGG - chr3_4:57956785-57956804 Msa0509540:intron 40.0%
TTAGGCAATTGTTACAGAGG+AGG - chr3_4:57956812-57956831 Msa0509540:intron 40.0%
CAATTGTTACAGAGGAGGAT+GGG - chr3_4:57956817-57956836 Msa0509540:intron 40.0%
ATTTCTTTCTGCTGCTGTCA+AGG - chr3_4:57956860-57956879 Msa0509540:intron 40.0%
CACGCTTGCTTCGTAAATAT+AGG - chr3_4:57956972-57956991 Msa0509540:intron 40.0%
!! TGAAGTCGAAGGGTATTATG+AGG - chr3_4:57957127-57957146 Msa0509540:intron 40.0%
!! GAAGTCGAAGGGTATTATGA+GGG - chr3_4:57957128-57957147 Msa0509540:intron 40.0%
ACTAGGAAACTCTAGCTATC+AGG + chr3_4:57957279-57957298 None:intergenic 40.0%
!! CACCTCAATAATGTCGCTTT+CGG + chr3_4:57957363-57957382 None:intergenic 40.0%
!!! GTTGCATTTGGTGTCTTTTG+TGG - chr3_4:57957394-57957413 Msa0509540:intron 40.0%
ATTTGCCCGAAAATTAGCTG+TGG + chr3_4:57957427-57957446 None:intergenic 40.0%
TCAAAAACCACACACTTGGA+AGG + chr3_4:57957537-57957556 None:intergenic 40.0%
!! ATGATGGCTGTAGCATTGAT+TGG - chr3_4:57957597-57957616 Msa0509540:intron 40.0%
GATGGATAATGAAAACCTGC+AGG - chr3_4:57957832-57957851 Msa0509540:CDS 40.0%
GAAAACCTGCAGGTATGATT+TGG - chr3_4:57957842-57957861 Msa0509540:CDS 40.0%
AAACCTGCAGGTATGATTTG+GGG - chr3_4:57957844-57957863 Msa0509540:CDS 40.0%
! AGGAGACTGTTTGCTAACAA+GGG - chr3_4:57957918-57957937 Msa0509540:intron 40.0%
! GTCTATTCCAAGTCTCCTTT+TGG + chr3_4:57957991-57958010 None:intergenic 40.0%
TACAAGGAAAATTGGCAGAG+AGG + chr3_4:57958058-57958077 None:intergenic 40.0%
!!! CAGCAGATTGCTTCGTTTTT+TGG - chr3_4:57958228-57958247 Msa0509540:CDS 40.0%
TTTGTCATGTTCGCTTGATG+TGG - chr3_4:57958380-57958399 Msa0509540:five_prime_UTR 40.0%
GGAGAAGATTGAAGACGAGA+AGG + chr3_4:57954142-57954161 None:intergenic 45.0%
GAAATTTAAGCGGTTGGGGT+TGG - chr3_4:57954256-57954275 Msa0509540:three_prime_UTR 45.0%
!! GGTTGGGGTTGGTTAAGAAT+CGG - chr3_4:57954267-57954286 Msa0509540:three_prime_UTR 45.0%
TTAATTGCCCGTTGCACTTC+TGG - chr3_4:57954290-57954309 Msa0509540:three_prime_UTR 45.0%
TAATTGCCCGTTGCACTTCT+GGG - chr3_4:57954291-57954310 Msa0509540:three_prime_UTR 45.0%
!! CAGGCTATTGGTGCTGAATA+TGG - chr3_4:57954495-57954514 Msa0509540:CDS 45.0%
!! GGCTATTGGTGCTGAATATG+GGG - chr3_4:57954497-57954516 Msa0509540:CDS 45.0%
!! ATTGGTGCTGAATATGGGGA+AGG - chr3_4:57954501-57954520 Msa0509540:CDS 45.0%
!! TGGACCGTTGAAAGTTGATG+TGG - chr3_4:57954545-57954564 Msa0509540:intron 45.0%
CTATGCTATGAAGCCAGATG+AGG - chr3_4:57954708-57954727 Msa0509540:intron 45.0%
ATGAAGCCAGATGAGGCTTA+TGG - chr3_4:57954715-57954734 Msa0509540:intron 45.0%
CTTCTCTTGGGATAATGTGG+TGG - chr3_4:57954744-57954763 Msa0509540:intron 45.0%
TGAAACACAAGCATGGACAC+GGG - chr3_4:57954986-57955005 Msa0509540:intron 45.0%
! CGACACTGGCACATAGATTT+TGG - chr3_4:57955017-57955036 Msa0509540:intron 45.0%
TTGTCTCACTTCCACAAGCA+AGG + chr3_4:57955441-57955460 None:intergenic 45.0%
! AACCAACTTGCCTCTGAAGA+GGG - chr3_4:57955617-57955636 Msa0509540:intron 45.0%
AGCTGGATAGACTGAAGTTG+AGG - chr3_4:57956089-57956108 Msa0509540:CDS 45.0%
CTAGCTTGAAAGACCAATGG+AGG - chr3_4:57956230-57956249 Msa0509540:intron 45.0%
! CTTGAAAGACTGGTTGGAAG+CGG - chr3_4:57956254-57956273 Msa0509540:CDS 45.0%
GACTTGAAACAACAGCACAG+GGG + chr3_4:57956296-57956315 None:intergenic 45.0%
GGTAGAAGCTTTGCAACGAA+TGG - chr3_4:57956332-57956351 Msa0509540:intron 45.0%
TAGCCATAAAGAGGCCAAGT+TGG + chr3_4:57956710-57956729 None:intergenic 45.0%
GCAATTGTTACAGAGGAGGA+TGG - chr3_4:57956816-57956835 Msa0509540:intron 45.0%
! CTCAGCCCACATCTTTGAAA+AGG + chr3_4:57957209-57957228 None:intergenic 45.0%
AGGTTTCCGATCAAGCTACA+AGG + chr3_4:57957517-57957536 None:intergenic 45.0%
TGCGCACAATTGCACAATGA+TGG - chr3_4:57957581-57957600 Msa0509540:intron 45.0%
! GAGGAGACTGTTTGCTAACA+AGG - chr3_4:57957917-57957936 Msa0509540:intron 45.0%
GGGCTCTACATTTATGGACT+TGG - chr3_4:57957938-57957957 Msa0509540:intron 45.0%
AATCCTCCCAAAAGGAGACT+TGG - chr3_4:57957981-57958000 Msa0509540:intron 45.0%
! ATTCCAAGTCTCCTTTTGGG+AGG + chr3_4:57957987-57958006 None:intergenic 45.0%
AGGAAAATTGGCAGAGAGGA+GGG + chr3_4:57958054-57958073 None:intergenic 45.0%
AAGGAAAATTGGCAGAGAGG+AGG + chr3_4:57958055-57958074 None:intergenic 45.0%
ACATAGACGTTTGGAGAACC+GGG + chr3_4:57958179-57958198 None:intergenic 45.0%
CACATAGACGTTTGGAGAAC+CGG + chr3_4:57958180-57958199 None:intergenic 45.0%
ATTGCGTCCACATAGACGTT+TGG + chr3_4:57958188-57958207 None:intergenic 45.0%
AATCTGCTGTCCTAAGGGAA+GGG + chr3_4:57958217-57958236 None:intergenic 45.0%
GAAGCAATCTGCTGTCCTAA+GGG + chr3_4:57958222-57958241 None:intergenic 45.0%
AGTCGAGTATGGCAAATCTG+TGG - chr3_4:57958341-57958360 Msa0509540:five_prime_UTR 45.0%
! ATCAGACCCAGAAGTGCAAC+GGG + chr3_4:57954300-57954319 None:intergenic 50.0%
! CATCAGACCCAGAAGTGCAA+CGG + chr3_4:57954301-57954320 None:intergenic 50.0%
CGTCACATGCTCACATCACA+TGG - chr3_4:57954835-57954854 Msa0509540:CDS 50.0%
TGTCCAGCACATGCTAGTGT+CGG + chr3_4:57955102-57955121 None:intergenic 50.0%
! ACGTCTTCGGTCTGAAGTGT+CGG - chr3_4:57955121-57955140 Msa0509540:intron 50.0%
! GGTGCTACCTAGATTACACG+TGG - chr3_4:57955142-57955161 Msa0509540:intron 50.0%
CTCAGAGCCACGTGTAATCT+AGG + chr3_4:57955152-57955171 None:intergenic 50.0%
TGTCAGTGCTTCCTTGCTTG+TGG - chr3_4:57955427-57955446 Msa0509540:intron 50.0%
!! CTGATACTCGAGCTCTGAAG+AGG - chr3_4:57955585-57955604 Msa0509540:intron 50.0%
!! TACTCGAGCTCTGAAGAGGA+AGG - chr3_4:57955589-57955608 Msa0509540:intron 50.0%
! GAACCAACTTGCCTCTGAAG+AGG - chr3_4:57955616-57955635 Msa0509540:intron 50.0%
TACCCTCTTCAGAGGCAAGT+TGG + chr3_4:57955622-57955641 None:intergenic 50.0%
! AGCATGCCCTTTTGGATGGA+TGG - chr3_4:57955697-57955716 Msa0509540:intron 50.0%
CAGTCTTTCAAGCCCTCCAT+TGG + chr3_4:57956246-57956265 None:intergenic 50.0%
CAATGGAGGGCTTGAAAGAC+TGG - chr3_4:57956244-57956263 Msa0509540:CDS 50.0%
GGGGCTCGATAAGTACTTTC+AGG - chr3_4:57956353-57956372 Msa0509540:intron 50.0%
TGTTACAGAGGAGGATGGGA+TGG - chr3_4:57956821-57956840 Msa0509540:intron 50.0%
GGCCGAAAGCGACATTATTG+AGG - chr3_4:57957358-57957377 Msa0509540:intron 50.0%
TCGGAAACCTTCCAAGTGTG+TGG - chr3_4:57957527-57957546 Msa0509540:intron 50.0%
TTGCCCCAAATCATACCTGC+AGG + chr3_4:57957850-57957869 None:intergenic 50.0%
AAAATTGGCAGAGAGGAGGG+GGG + chr3_4:57958051-57958070 None:intergenic 50.0%
GAAAATTGGCAGAGAGGAGG+GGG + chr3_4:57958052-57958071 None:intergenic 50.0%
GGAAAATTGGCAGAGAGGAG+GGG + chr3_4:57958053-57958072 None:intergenic 50.0%
CGGTTCTCCAAACGTCTATG+TGG - chr3_4:57958178-57958197 Msa0509540:intron 50.0%
ATCTGCTGTCCTAAGGGAAG+GGG + chr3_4:57958216-57958235 None:intergenic 50.0%
CAATCTGCTGTCCTAAGGGA+AGG + chr3_4:57958218-57958237 None:intergenic 50.0%
CGAAGCAATCTGCTGTCCTA+AGG + chr3_4:57958223-57958242 None:intergenic 50.0%
GTCGGGTGACTAGAGGAAAT+AGG + chr3_4:57958274-57958293 None:intergenic 50.0%
GTCATGTTCGCTTGATGTGG+CGG - chr3_4:57958383-57958402 Msa0509540:five_prime_UTR 50.0%
AGACGAGAAGGGTGAGAGAG+AGG + chr3_4:57954130-57954149 None:intergenic 55.0%
! CACATGCTAGTGTCGGACAC+CGG + chr3_4:57955095-57955114 None:intergenic 55.0%
TGTCCGACACTAGCATGTGC+TGG - chr3_4:57955096-57955115 Msa0509540:intron 55.0%
GCATGTGCTGGACACGTCTT+CGG - chr3_4:57955108-57955127 Msa0509540:intron 55.0%
!! GAGCTCTGAAGAGGAAGGCA+TGG - chr3_4:57955594-57955613 Msa0509540:intron 55.0%
GGAGGGCTTGAAAGACTGGT+TGG - chr3_4:57956248-57956267 Msa0509540:CDS 55.0%
GGGGGGCAAAAAGAATGGAG+AGG + chr3_4:57958034-57958053 None:intergenic 55.0%
GAGGAGGGGGGCAAAAAGAA+TGG + chr3_4:57958039-57958058 None:intergenic 55.0%
AACGTCTGTCGGGTGACTAG+AGG + chr3_4:57958281-57958300 None:intergenic 55.0%
CCGACATGAGAACGTCTGTC+GGG + chr3_4:57958291-57958310 None:intergenic 55.0%
CCCGACAGACGTTCTCATGT+CGG - chr3_4:57958288-57958307 Msa0509540:CDS 55.0%
CCCGACATGAGAACGTCTGT+CGG + chr3_4:57958292-57958311 None:intergenic 55.0%
CCGACAGACGTTCTCATGTC+GGG - chr3_4:57958289-57958308 Msa0509540:CDS 55.0%
CACGGGACACGATACGACAC+TGG - chr3_4:57955003-57955022 Msa0509540:intron 60.0%
TGCGCAGCAGTTACTGCTCG+AGG + chr3_4:57957567-57957586 None:intergenic 60.0%
CAATGCCCTCCCCTTCCCTT+AGG - chr3_4:57958204-57958223 Msa0509540:intron 60.0%
GCTGTCCTAAGGGAAGGGGA+GGG + chr3_4:57958212-57958231 None:intergenic 60.0%
TGCTGTCCTAAGGGAAGGGG+AGG + chr3_4:57958213-57958232 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 57953960 57958427 57953960 ID=Msa0509540;Name=Msa0509540
chr3_4 mRNA 57953960 57958427 57953960 ID=Msa0509540-mRNA-1;Parent=Msa0509540;Name=Msa0509540-mRNA-1;_AED=0.16;_eAED=0.16;_QI=119|1|1|1|1|1|11|405|363
chr3_4 exon 57953960 57954533 57953960 ID=Msa0509540-mRNA-1:exon:13344;Parent=Msa0509540-mRNA-1
chr3_4 exon 57954756 57954865 57954756 ID=Msa0509540-mRNA-1:exon:13343;Parent=Msa0509540-mRNA-1
chr3_4 exon 57955506 57955571 57955506 ID=Msa0509540-mRNA-1:exon:13342;Parent=Msa0509540-mRNA-1
chr3_4 exon 57956013 57956153 57956013 ID=Msa0509540-mRNA-1:exon:13341;Parent=Msa0509540-mRNA-1
chr3_4 exon 57956243 57956326 57956243 ID=Msa0509540-mRNA-1:exon:13340;Parent=Msa0509540-mRNA-1
chr3_4 exon 57956475 57956548 57956475 ID=Msa0509540-mRNA-1:exon:13339;Parent=Msa0509540-mRNA-1
chr3_4 exon 57956749 57956803 57956749 ID=Msa0509540-mRNA-1:exon:13338;Parent=Msa0509540-mRNA-1
chr3_4 exon 57957622 57957726 57957622 ID=Msa0509540-mRNA-1:exon:13337;Parent=Msa0509540-mRNA-1
chr3_4 exon 57957821 57957889 57957821 ID=Msa0509540-mRNA-1:exon:13336;Parent=Msa0509540-mRNA-1
chr3_4 exon 57958011 57958130 57958011 ID=Msa0509540-mRNA-1:exon:13335;Parent=Msa0509540-mRNA-1
chr3_4 exon 57958210 57958427 57958210 ID=Msa0509540-mRNA-1:exon:13334;Parent=Msa0509540-mRNA-1
chr3_4 five_prime_UTR 57958309 57958427 57958309 ID=Msa0509540-mRNA-1:five_prime_utr;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57958210 57958308 57958210 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57958011 57958130 57958011 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57957821 57957889 57957821 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57957622 57957726 57957622 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57956749 57956803 57956749 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57956475 57956548 57956475 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57956243 57956326 57956243 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57956013 57956153 57956013 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57955506 57955571 57955506 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57954756 57954865 57954756 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 CDS 57954365 57954533 57954365 ID=Msa0509540-mRNA-1:cds;Parent=Msa0509540-mRNA-1
chr3_4 three_prime_UTR 57953960 57954364 57953960 ID=Msa0509540-mRNA-1:three_prime_utr;Parent=Msa0509540-mRNA-1
Gene Sequence

>Msa0509540

ATGAACTCCACTACTTTCTCCAATTGCAGAGCTACTTCTCATTCAATTCCTCTCTCTCACCCTTCTCGTCTTCAATCTTCTCCTTCTCCCAATTCAATGAAATTTAAGCGGTTGGGGTTGGTTAAGAATCGGTTAATTGCCCGTTGCACTTCTGGGTCTGATGAATTTGGTTCTCTTAATGGAATTCAGTTAACACCCAATAAACTTTTCGTGCAAGAGGCTATTGGTGCTGAATATGGGGAAGGATTTGAAACTTTTAGGGCAGATGGACCGTTGAAAGTTGATGTGGACTATTTGAATGATAAGTTACAAGATGGTATTCTTCAGCGTATACGCTATGCTATGAAGCCAGATGAGGCTTATGGTCTTATCTTCTCTTGGGATAATGTGGTGGCTGATACTCGAGCTCTGAAGAGGAAGGCATGGAACCAACTTGCCTCTGAAGAGGGAAAGGATATTCCTGAAGATGCTGATATTGAAAGGTTAATGCTTAATACAGGTGCTGATAATGTATTGAATAAGCATTTTCTCTCTAATAAGGAAGAAAGTGAGCTGGATAGACTGAAGTTGAGGTTTTCGCAAATATATTACGACAATCTTCTGAAACTTGAAAGACCAATGGAGGGCTTGAAAGACTGGTTGGAAGCGGTTTATACAGCTCGCATCCCCTGTGCTGTTGTTTCAAGTCTTGATAGGAAAAATATGGTAGAAGCTTTGCAACGAATGGGGCTCGATAAGTACTTTCAGGCAATTGTTACAGAGGAGGATGGGATGGAGTCAATAGCTCATAGATTTCTTTCTGCTGCTGTCAAGCTTGATCGGAAACCTTCCAAGTGTGTGGTTTTTGAAGATGATCCTCGAGCAGTAACTGCTGCGCACAATTGCACAATGATGGCTGTAGCATTGATTGGAGCATATCGCGCGTATGATTTGGGGCAAGCTGATCTTGCTGTTGCCAACTTCAGTGAACTTTCTGTAATCAACTTGAGGAGACTGTTTGCTAACAAGGGCTCTACATTTATGGACTTGGAGAAGCAGATCATAGATAAGAATCCTCCCAAAAGGAGACTTGGAATAGACACCATTTTCTAA

Protein sequence

>Msa0509540

MNSTTFSNCRATSHSIPLSHPSRLQSSPSPNSMKFKRLGLVKNRLIARCTSGSDEFGSLNGIQLTPNKLFVQEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDGILQRIRYAMKPDEAYGLIFSWDNVVADTRALKRKAWNQLASEEGKDIPEDADIERLMLNTGADNVLNKHFLSNKEESELDRLKLRFSQIYYDNLLKLERPMEGLKDWLEAVYTARIPCAVVSSLDRKNMVEALQRMGLDKYFQAIVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRAVTAAHNCTMMAVALIGAYRAYDLGQADLAVANFSELSVINLRRLFANKGSTFMDLEKQIIDKNPPKRRLGIDTIF*