Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698030 | XP_013457252.1 | 89.243 | 251 | 5 | 1 | 1 | 251 | 1 | 229 | 2.17e-155 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698030 | sp|C7AE94|FAOMT_VITVI | 61.847 | 249 | 74 | 2 | 3 | 251 | 7 | 234 | 1.44e-102 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698030 | A0A072UQF3 | 89.243 | 251 | 5 | 1 | 1 | 251 | 1 | 229 | 1.04e-155 | 441 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043980 | Msa0698030 | 0.800787 | 1.223125e-48 | -8.615850e-47 |
| Msa0115270 | Msa0698030 | 0.848181 | 7.219539e-60 | -8.615850e-47 |
| Msa0115390 | Msa0698030 | 0.842928 | 1.916313e-58 | -8.615850e-47 |
| Msa0118540 | Msa0698030 | 0.801423 | 9.069325e-49 | -8.615850e-47 |
| Msa0608160 | Msa0698030 | 0.806440 | 8.217880e-50 | -8.615850e-47 |
| Msa0616240 | Msa0698030 | 0.817560 | 3.094638e-52 | -8.615850e-47 |
| Msa0626850 | Msa0698030 | 0.827866 | 1.234404e-54 | -8.615850e-47 |
| Msa0638540 | Msa0698030 | 0.807258 | 5.520051e-50 | -8.615850e-47 |
| Msa0641670 | Msa0698030 | 0.913310 | 7.134074e-84 | -8.615850e-47 |
| Msa0648080 | Msa0698030 | 0.801390 | 9.208522e-49 | -8.615850e-47 |
| Msa0649350 | Msa0698030 | 0.806788 | 6.939724e-50 | -8.615850e-47 |
| Msa0657870 | Msa0698030 | 0.808360 | 3.217824e-50 | -8.615850e-47 |
| Msa0664970 | Msa0698030 | 0.827089 | 1.896060e-54 | -8.615850e-47 |
| Msa0669720 | Msa0698030 | 0.801031 | 1.090895e-48 | -8.615850e-47 |
| Msa0669760 | Msa0698030 | 0.803668 | 3.122890e-49 | -8.615850e-47 |
| Msa0682680 | Msa0698030 | 0.800124 | 1.669309e-48 | -8.615850e-47 |
| Msa0688390 | Msa0698030 | 0.828780 | 7.433806e-55 | -8.615850e-47 |
| Msa0698030 | Msa0698540 | 0.821301 | 4.343370e-53 | -8.615850e-47 |
| Msa0698030 | Msa0699570 | 0.815673 | 8.195141e-52 | -8.615850e-47 |
| Msa0698030 | Msa0705820 | 0.801971 | 6.999758e-49 | -8.615850e-47 |
| Msa0698030 | Msa0731270 | 0.804802 | 1.813982e-49 | -8.615850e-47 |
| Msa0698030 | Msa0771280 | 0.804912 | 1.719986e-49 | -8.615850e-47 |
| Msa0698030 | Msa0849030 | 0.809757 | 1.616321e-50 | -8.615850e-47 |
| Msa0698030 | Msa0861470 | 0.811090 | 8.331495e-51 | -8.615850e-47 |
| Msa0698030 | Msa0861570 | 0.805509 | 1.290028e-49 | -8.615850e-47 |
| Msa0698030 | Msa0880810 | 0.800793 | 1.220013e-48 | -8.615850e-47 |
| Msa0698030 | Msa0888260 | 0.815143 | 1.075039e-51 | -8.615850e-47 |
| Msa0698030 | Msa0935770 | 0.801402 | 9.158724e-49 | -8.615850e-47 |
| Msa0698030 | Msa0969520 | 0.800627 | 1.318963e-48 | -8.615850e-47 |
| Msa0698030 | Msa1000930 | 0.816337 | 5.825347e-52 | -8.615850e-47 |
| Msa0698030 | Msa1023180 | 0.817298 | 3.545266e-52 | -8.615850e-47 |
| Msa0698030 | Msa1036640 | 0.810014 | 1.422555e-50 | -8.615850e-47 |
| Msa0698030 | Msa1037420 | 0.812711 | 3.695898e-51 | -8.615850e-47 |
| Msa0698030 | Msa1043050 | 0.820012 | 8.588194e-53 | -8.615850e-47 |
| Msa0698030 | Msa1048160 | 0.819318 | 1.236873e-52 | -8.615850e-47 |
| Msa0698030 | Msa1071320 | 0.801978 | 6.974755e-49 | -8.615850e-47 |
| Msa0698030 | Msa1075650 | 0.802348 | 5.855393e-49 | -8.615850e-47 |
| Msa0698030 | Msa1076960 | 0.817433 | 3.306657e-52 | -8.615850e-47 |
| Msa0698030 | Msa1080960 | 0.803433 | 3.494384e-49 | -8.615850e-47 |
| Msa0698030 | Msa1089460 | 0.807010 | 6.227459e-50 | -8.615850e-47 |
| Msa0698030 | Msa1119090 | 0.810223 | 1.282863e-50 | -8.615850e-47 |
| Msa0698030 | Msa1119190 | 0.814205 | 1.734799e-51 | -8.615850e-47 |
| Msa0698030 | Msa1122860 | 0.834922 | 2.265144e-56 | -8.615850e-47 |
| Msa0698030 | Msa1123810 | 0.820580 | 6.364260e-53 | -8.615850e-47 |
| Msa0698030 | Msa1129550 | 0.809721 | 1.645063e-50 | -8.615850e-47 |
| Msa0698030 | Msa1129730 | 0.826431 | 2.723322e-54 | -8.615850e-47 |
| Msa0698030 | Msa1150710 | 0.835653 | 1.480445e-56 | -8.615850e-47 |
| Msa0698030 | Msa1174040 | 0.808991 | 2.359011e-50 | -8.615850e-47 |
| Msa0698030 | Msa1188560 | 0.817322 | 3.501545e-52 | -8.615850e-47 |
| Msa0698030 | Msa1205590 | 0.811644 | 6.316348e-51 | -8.615850e-47 |
| Msa0698030 | Msa1225100 | 0.806131 | 9.545607e-50 | -8.615850e-47 |
| Msa0698030 | Msa1225130 | 0.801016 | 1.098692e-48 | -8.615850e-47 |
| Msa0698030 | Msa1250530 | 0.827872 | 1.230533e-54 | -8.615850e-47 |
| Msa0698030 | Msa1275360 | 0.818568 | 1.831382e-52 | -8.615850e-47 |
| Msa0698030 | Msa1297530 | 0.828216 | 1.017194e-54 | -8.615850e-47 |
| Msa0698030 | Msa1306560 | 0.816274 | 6.018726e-52 | -8.615850e-47 |
| Msa0698030 | Msa1329870 | 0.807474 | 4.965700e-50 | -8.615850e-47 |
| Msa0698030 | Msa1340470 | 0.800888 | 1.166843e-48 | -8.615850e-47 |
| Msa0698030 | Msa1355890 | 0.818931 | 1.515064e-52 | -8.615850e-47 |
| Msa0698030 | Msa1375380 | 0.832227 | 1.065903e-55 | -8.615850e-47 |
| Msa0698030 | Msa1380400 | 0.810393 | 1.178521e-50 | -8.615850e-47 |
| Msa0698030 | Msa1385770 | 0.800540 | 1.374003e-48 | -8.615850e-47 |
| Msa0698030 | Msa1405220 | 0.810091 | 1.369352e-50 | -8.615850e-47 |
| Msa0698030 | Msa1409240 | 0.800730 | 1.256535e-48 | -8.615850e-47 |
| Msa0698030 | Msa1418850 | 0.812523 | 4.062521e-51 | -8.615850e-47 |
| Msa0698030 | Msa1434140 | 0.814831 | 1.260840e-51 | -8.615850e-47 |
| Msa0698030 | Msa1435270 | 0.818973 | 1.482258e-52 | -8.615850e-47 |
| Msa0698030 | Msa1436600 | 0.803166 | 3.968700e-49 | -8.615850e-47 |
| Msa0698030 | Msa1436650 | 0.806719 | 7.174593e-50 | -8.615850e-47 |
| Msa0698030 | Msa1448630 | 0.810241 | 1.271275e-50 | -8.615850e-47 |
| Msa0698030 | Msa1454570 | 0.829965 | 3.831323e-55 | -8.615850e-47 |
| Msa0698030 | Msa1457160 | 0.808228 | 3.433246e-50 | -8.615850e-47 |
| Msa0698030 | Msa1460320 | -0.822782 | 1.970106e-53 | -8.615850e-47 |
| Msa0698030 | Msa1462360 | 0.803943 | 2.738820e-49 | -8.615850e-47 |
| Msa0121590 | Msa0698030 | 0.800812 | 1.208858e-48 | -8.615850e-47 |
| Msa0138020 | Msa0698030 | 0.823358 | 1.445922e-53 | -8.615850e-47 |
| Msa0191440 | Msa0698030 | 0.829600 | 4.701038e-55 | -8.615850e-47 |
| Msa0194480 | Msa0698030 | 0.809557 | 1.783981e-50 | -8.615850e-47 |
| Msa0229360 | Msa0698030 | 0.840809 | 6.951390e-58 | -8.615850e-47 |
| Msa0417330 | Msa0698030 | 0.803395 | 3.557997e-49 | -8.615850e-47 |
| Msa0432160 | Msa0698030 | 0.802449 | 5.581933e-49 | -8.615850e-47 |
| Msa0469620 | Msa0698030 | -0.801807 | 7.563769e-49 | -8.615850e-47 |
| Msa0476680 | Msa0698030 | 0.805836 | 1.101377e-49 | -8.615850e-47 |
| Msa0243090 | Msa0698030 | 0.803768 | 2.978225e-49 | -8.615850e-47 |
| Msa0296790 | Msa0698030 | 0.802502 | 5.443458e-49 | -8.615850e-47 |
| Msa0304510 | Msa0698030 | 0.805272 | 1.445863e-49 | -8.615850e-47 |
| Msa0320430 | Msa0698030 | 0.847144 | 1.392633e-59 | -8.615850e-47 |
| Msa0343850 | Msa0698030 | 0.820680 | 6.036310e-53 | -8.615850e-47 |
| Msa0347750 | Msa0698030 | 0.806327 | 8.679534e-50 | -8.615850e-47 |
| Msa0363790 | Msa0698030 | 0.811868 | 5.644793e-51 | -8.615850e-47 |
| Msa0485850 | Msa0698030 | 0.802655 | 5.060177e-49 | -8.615850e-47 |
| Msa0521010 | Msa0698030 | 0.805106 | 1.566604e-49 | -8.615850e-47 |
| Msa0534410 | Msa0698030 | 0.803686 | 3.096866e-49 | -8.615850e-47 |
| Msa0546540 | Msa0698030 | 0.804569 | 2.028945e-49 | -8.615850e-47 |
| Msa0584860 | Msa0698030 | 0.803541 | 3.319188e-49 | -8.615850e-47 |
| Msa0587030 | Msa0698030 | 0.837814 | 4.162723e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698030 | MtrunA17_Chr4g0051041 | 89.243 | 251 | 5 | 1 | 1 | 251 | 1 | 229 | 2.00e-159 | 441 |
| Msa0698030 | MtrunA17_Chr4g0053331 | 50.201 | 249 | 97 | 4 | 3 | 249 | 17 | 240 | 3.50e-78 | 236 |
| Msa0698030 | MtrunA17_Chr4g0053031 | 48.583 | 247 | 104 | 4 | 3 | 249 | 22 | 245 | 3.07e-76 | 231 |
| Msa0698030 | MtrunA17_Chr4g0044581 | 48.178 | 247 | 105 | 3 | 3 | 249 | 21 | 244 | 3.28e-76 | 231 |
| Msa0698030 | MtrunA17_Chr4g0053021 | 49.798 | 247 | 101 | 2 | 3 | 249 | 20 | 243 | 8.47e-76 | 230 |
| Msa0698030 | MtrunA17_Chr4g0053241 | 49.798 | 247 | 101 | 3 | 3 | 249 | 22 | 245 | 3.89e-75 | 228 |
| Msa0698030 | MtrunA17_Chr8g0344401 | 48.980 | 245 | 102 | 2 | 5 | 249 | 11 | 232 | 3.96e-75 | 228 |
| Msa0698030 | MtrunA17_Chr8g0389361 | 47.755 | 245 | 104 | 3 | 5 | 249 | 17 | 237 | 2.19e-65 | 203 |
| Msa0698030 | MtrunA17_Chr6g0487981 | 45.635 | 252 | 107 | 6 | 4 | 249 | 8 | 235 | 1.20e-61 | 193 |
| Msa0698030 | MtrunA17_Chr2g0312921 | 36.364 | 242 | 121 | 6 | 8 | 249 | 88 | 296 | 2.33e-41 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0698030 | AT1G67980.1 | 56.627 | 249 | 83 | 3 | 3 | 251 | 8 | 231 | 2.08e-91 | 269 |
| Msa0698030 | AT1G24735.1 | 55.870 | 247 | 86 | 3 | 5 | 251 | 16 | 239 | 1.40e-88 | 262 |
| Msa0698030 | AT1G67990.1 | 51.406 | 249 | 97 | 2 | 3 | 251 | 8 | 232 | 5.67e-85 | 253 |
| Msa0698030 | AT1G24735.2 | 46.309 | 298 | 86 | 4 | 5 | 251 | 16 | 290 | 1.74e-78 | 239 |
| Msa0698030 | AT4G34050.1 | 46.559 | 247 | 109 | 3 | 3 | 249 | 33 | 256 | 1.01e-73 | 225 |
| Msa0698030 | AT4G34050.3 | 46.559 | 247 | 109 | 3 | 3 | 249 | 60 | 283 | 4.05e-73 | 225 |
| Msa0698030 | AT4G26220.1 | 46.400 | 250 | 110 | 4 | 2 | 251 | 6 | 231 | 4.30e-70 | 215 |
| Msa0698030 | AT1G24735.3 | 53.555 | 211 | 75 | 3 | 41 | 251 | 7 | 194 | 3.32e-68 | 209 |
| Msa0698030 | AT3G61990.1 | 37.037 | 243 | 115 | 5 | 8 | 249 | 83 | 288 | 2.70e-47 | 159 |
| Msa0698030 | AT1G67980.2 | 45.455 | 187 | 77 | 3 | 65 | 251 | 2 | 163 | 2.47e-43 | 144 |
| Msa0698030 | AT3G62000.1 | 35.391 | 243 | 122 | 7 | 8 | 249 | 68 | 276 | 2.09e-40 | 140 |
| Msa0698030 | AT3G62000.2 | 34.188 | 234 | 119 | 7 | 8 | 240 | 68 | 267 | 3.14e-33 | 124 |
| Msa0698030 | AT4G34050.2 | 38.028 | 142 | 67 | 2 | 108 | 249 | 25 | 145 | 3.65e-27 | 102 |
Find 52 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTTCTTTGTTCCTTTGA+TGG | 0.196352 | 4_4:+68165206 | None:intergenic |
| GAAACAACAATTCAGAAGTA+TGG | 0.226874 | 4_4:-68166849 | Msa0698030:CDS |
| TGTGCATTGGGGTCTGGTTC+TGG | 0.235457 | 4_4:-68166015 | Msa0698030:CDS |
| TTCAATTGTTCGTGCTCTTT+TGG | 0.241069 | 4_4:+68166882 | None:intergenic |
| TTTCATCACTTTCAGGTAAT+AGG | 0.252449 | 4_4:-68166465 | Msa0698030:intron |
| GAATCAACAATCCTTTCTAT+TGG | 0.264328 | 4_4:-68165261 | Msa0698030:CDS |
| AATCAACAATCCTTTCTATT+GGG | 0.280127 | 4_4:-68165260 | Msa0698030:CDS |
| TTGCATATTGTAACACATTA+TGG | 0.303504 | 4_4:-68165392 | Msa0698030:CDS |
| ATCCACAGTGATGCATTATC+AGG | 0.304543 | 4_4:-68166363 | Msa0698030:CDS |
| TCACGAGCTGTTGTTGAAAT+TGG | 0.308284 | 4_4:-68165433 | Msa0698030:CDS |
| GTCCTGTCTGATTGTGCATT+GGG | 0.340137 | 4_4:-68166027 | Msa0698030:CDS |
| TCAGGTAATAGGAATTGATA+TGG | 0.352155 | 4_4:-68166454 | Msa0698030:intron |
| TCTGATTGTGCATTGGGGTC+TGG | 0.352844 | 4_4:-68166021 | Msa0698030:CDS |
| CAAAACTCCAGCACTTCTTC+AGG | 0.360798 | 4_4:-68167028 | Msa0698030:intron |
| ATCATTTGATTATGCATTTG+TGG | 0.388543 | 4_4:-68165484 | Msa0698030:CDS |
| AGGAAATGGAAGATACAATA+AGG | 0.400536 | 4_4:-68165341 | Msa0698030:CDS |
| GTCTGGTTCTGGCTCTGTGC+CGG | 0.408474 | 4_4:-68166004 | Msa0698030:CDS |
| TTTGAGGATGTTCTTGGCCA+TGG | 0.424703 | 4_4:+68167047 | None:intergenic |
| GATCAACTTGCTGTTTGCTC+TGG | 0.428953 | 4_4:-68167077 | Msa0698030:five_prime_UTR |
| AGTCCTGTCTGATTGTGCAT+TGG | 0.438748 | 4_4:-68166028 | Msa0698030:CDS |
| AACTTCTGCCTTCTGAATGA+AGG | 0.443554 | 4_4:+68166404 | None:intergenic |
| TGCTCTTCCTTCTGATGGCA+AGG | 0.457076 | 4_4:-68166554 | Msa0698030:intron |
| TGTGCCGGTTTCTATTTCTC+AGG | 0.457993 | 4_4:-68165989 | Msa0698030:intron |
| GCTCTTGCTCTTCCTTCTGA+TGG | 0.470052 | 4_4:-68166559 | Msa0698030:CDS |
| TTAGAAATTGGAGTCTTCAC+TGG | 0.475666 | 4_4:-68166601 | Msa0698030:CDS |
| ATTATTACCTGAAGAAGTGC+TGG | 0.476254 | 4_4:+68167021 | None:intergenic |
| GAGTATAATGAATGTGCCTT+TGG | 0.477530 | 4_4:-68166677 | Msa0698030:CDS |
| TATTGTAACACATTATGGTC+TGG | 0.485641 | 4_4:-68165387 | Msa0698030:CDS |
| GTTGTTGAAATTGGTGAAGA+AGG | 0.485943 | 4_4:-68165424 | Msa0698030:CDS |
| CATGTCTGAGGATGAGGAAA+TGG | 0.492122 | 4_4:-68165355 | Msa0698030:CDS |
| TGTAGCCATGTCTGAGGATG+AGG | 0.495939 | 4_4:-68165361 | Msa0698030:CDS |
| TTGAGAAATTCATTAACTGC+TGG | 0.509665 | 4_4:-68167106 | Msa0698030:five_prime_UTR |
| AAACAACAATTCAGAAGTAT+GGG | 0.513999 | 4_4:-68166848 | Msa0698030:CDS |
| GATAAAGAAGCATATGAGAC+AGG | 0.521908 | 4_4:-68166432 | Msa0698030:CDS |
| TTTGCTCTGGACTTGAACCA+TGG | 0.526078 | 4_4:-68167064 | Msa0698030:exon |
| CAAACCTGAGAAATAGAAAC+CGG | 0.534037 | 4_4:+68165985 | None:intergenic |
| ATCAACAATCCTTTCTATTG+GGG | 0.546246 | 4_4:-68165259 | Msa0698030:CDS |
| TTGAAATTGGTGAAGAAGGG+TGG | 0.553175 | 4_4:-68165420 | Msa0698030:CDS |
| AATGATACCTTGCCATCAGA+AGG | 0.554204 | 4_4:+68166547 | None:intergenic |
| ACCCCAATGCACAATCAGAC+AGG | 0.557151 | 4_4:+68166025 | None:intergenic |
| ACTTCTGCCTTCTGAATGAA+GGG | 0.557570 | 4_4:+68166405 | None:intergenic |
| ATGAATTGTGCTTCATCCAA+AGG | 0.563739 | 4_4:+68166661 | None:intergenic |
| TTACACCGTCCCCAATAGAA+AGG | 0.565363 | 4_4:+68165250 | None:intergenic |
| TTGTTGAAATTGGTGAAGAA+GGG | 0.567331 | 4_4:-68165423 | Msa0698030:CDS |
| AGGATTGCCCTTCATTCAGA+AGG | 0.568251 | 4_4:-68166412 | Msa0698030:CDS |
| CATTTCCTCATCCTCAGACA+TGG | 0.568293 | 4_4:+68165356 | None:intergenic |
| TGCATTTGTGGATGCTGACA+AGG | 0.577388 | 4_4:-68165472 | Msa0698030:CDS |
| ACAATCCTTTCTATTGGGGA+CGG | 0.594828 | 4_4:-68165255 | Msa0698030:CDS |
| TCCTGTCTGATTGTGCATTG+GGG | 0.611858 | 4_4:-68166026 | Msa0698030:CDS |
| AGAGTTCTCTAAGCCATCAA+AGG | 0.614512 | 4_4:-68165219 | Msa0698030:exon |
| TGGTTCTGTAGCCATGTCTG+AGG | 0.624517 | 4_4:-68165367 | Msa0698030:CDS |
| TGCCTGATAATGCATCACTG+TGG | 0.800721 | 4_4:+68166361 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTGATTTTAATATTTGT+TGG | - | chr4_4:68165566-68165585 | Msa0698030:intron | 15.0% |
| !!! | CATTGATTTTAATATTTGTT+GGG | - | chr4_4:68165567-68165586 | Msa0698030:intron | 15.0% |
| !! | AATAAGATAATCATTCAATT+TGG | + | chr4_4:68166080-68166099 | None:intergenic | 15.0% |
| !!! | CTTATAATAATAGTTCTTTT+CGG | - | chr4_4:68166133-68166152 | Msa0698030:intron | 15.0% |
| !! | TTCAATTTCTTAAGTATATT+TGG | - | chr4_4:68166685-68166704 | Msa0698030:intron | 15.0% |
| !!! | TTTTTTTTAATGAACAATTG+CGG | - | chr4_4:68167114-68167133 | Msa0698030:five_prime_UTR | 15.0% |
| !!! | ACATTGATTTTAATATTTGT+TGG | - | chr4_4:68165566-68165585 | Msa0698030:intron | 15.0% |
| !!! | CATTGATTTTAATATTTGTT+GGG | - | chr4_4:68165567-68165586 | Msa0698030:intron | 15.0% |
| !! | AATAAGATAATCATTCAATT+TGG | + | chr4_4:68166080-68166099 | None:intergenic | 15.0% |
| !!! | CTTATAATAATAGTTCTTTT+CGG | - | chr4_4:68166133-68166152 | Msa0698030:intron | 15.0% |
| !! | TTCAATTTCTTAAGTATATT+TGG | - | chr4_4:68166685-68166704 | Msa0698030:intron | 15.0% |
| !! | TTAAGAAAACTCAATTAATC+TGG | + | chr4_4:68165304-68165323 | None:intergenic | 20.0% |
| !! | TAATTAATATCTCTAGTAGA+AGG | + | chr4_4:68165328-68165347 | None:intergenic | 20.0% |
| !! | ATAATCATTCAATTTGGATT+GGG | + | chr4_4:68166074-68166093 | None:intergenic | 20.0% |
| !! | TTAAGAAAACTCAATTAATC+TGG | + | chr4_4:68165304-68165323 | None:intergenic | 20.0% |
| !! | TAATTAATATCTCTAGTAGA+AGG | + | chr4_4:68165328-68165347 | None:intergenic | 20.0% |
| !! | ATAATCATTCAATTTGGATT+GGG | + | chr4_4:68166074-68166093 | None:intergenic | 20.0% |
| !! | AACTTGTTTCAAGAATATAC+TGG | + | chr4_4:68165374-68165393 | None:intergenic | 25.0% |
| !! | AAACAACAATTCAGAAGTAT+GGG | - | chr4_4:68165433-68165452 | Msa0698030:CDS | 25.0% |
| !!! | ATTTTAATATTTGTTGGGTG+TGG | - | chr4_4:68165572-68165591 | Msa0698030:intron | 25.0% |
| ! | GCGAAAAAAACATTAGAAAT+TGG | - | chr4_4:68165668-68165687 | Msa0698030:intron | 25.0% |
| ! | GAATAAATTTCATCACTTTC+AGG | - | chr4_4:68165809-68165828 | Msa0698030:intron | 25.0% |
| ! | GATAATCATTCAATTTGGAT+TGG | + | chr4_4:68166075-68166094 | None:intergenic | 25.0% |
| !! | ATAATAATAGTTCTTTTCGG+TGG | - | chr4_4:68166136-68166155 | Msa0698030:intron | 25.0% |
| !!! | TATTCATTTTCTGCTTTGTT+AGG | - | chr4_4:68166226-68166245 | Msa0698030:intron | 25.0% |
| !!! | ATTCATTTTCTGCTTTGTTA+GGG | - | chr4_4:68166227-68166246 | Msa0698030:intron | 25.0% |
| !!! | TGTTTTAAATTGTATCATCG+TGG | - | chr4_4:68166410-68166429 | Msa0698030:CDS | 25.0% |
| ! | TGTTTCGAAAAGAAAACTTA+TGG | - | chr4_4:68166656-68166675 | Msa0698030:CDS | 25.0% |
| ! | GTTTCGAAAAGAAAACTTAT+GGG | - | chr4_4:68166657-68166676 | Msa0698030:CDS | 25.0% |
| ! | TCGTTTAGACAATGAATTAA+AGG | - | chr4_4:68166736-68166755 | Msa0698030:intron | 25.0% |
| ! | ATCATTTGATTATGCATTTG+TGG | - | chr4_4:68166797-68166816 | Msa0698030:intron | 25.0% |
| ! | TTGCATATTGTAACACATTA+TGG | - | chr4_4:68166889-68166908 | Msa0698030:CDS | 25.0% |
| !! | TCAATTGCAACTTTTCTTTT+TGG | + | chr4_4:68166966-68166985 | None:intergenic | 25.0% |
| ! | AATCAACAATCCTTTCTATT+GGG | - | chr4_4:68167021-68167040 | Msa0698030:intron | 25.0% |
| !! | TTATTTCTTTGTTCCTTTGA+TGG | + | chr4_4:68167078-68167097 | None:intergenic | 25.0% |
| !! | AACTTGTTTCAAGAATATAC+TGG | + | chr4_4:68165374-68165393 | None:intergenic | 25.0% |
| !! | AAACAACAATTCAGAAGTAT+GGG | - | chr4_4:68165433-68165452 | Msa0698030:CDS | 25.0% |
| !!! | ATTTTAATATTTGTTGGGTG+TGG | - | chr4_4:68165572-68165591 | Msa0698030:intron | 25.0% |
| ! | GCGAAAAAAACATTAGAAAT+TGG | - | chr4_4:68165668-68165687 | Msa0698030:intron | 25.0% |
| ! | GAATAAATTTCATCACTTTC+AGG | - | chr4_4:68165809-68165828 | Msa0698030:intron | 25.0% |
| ! | GATAATCATTCAATTTGGAT+TGG | + | chr4_4:68166075-68166094 | None:intergenic | 25.0% |
| !! | ATAATAATAGTTCTTTTCGG+TGG | - | chr4_4:68166136-68166155 | Msa0698030:intron | 25.0% |
| !!! | TATTCATTTTCTGCTTTGTT+AGG | - | chr4_4:68166226-68166245 | Msa0698030:intron | 25.0% |
| !!! | ATTCATTTTCTGCTTTGTTA+GGG | - | chr4_4:68166227-68166246 | Msa0698030:intron | 25.0% |
| !!! | TGTTTTAAATTGTATCATCG+TGG | - | chr4_4:68166410-68166429 | Msa0698030:CDS | 25.0% |
| ! | TGTTTCGAAAAGAAAACTTA+TGG | - | chr4_4:68166656-68166675 | Msa0698030:CDS | 25.0% |
| ! | GTTTCGAAAAGAAAACTTAT+GGG | - | chr4_4:68166657-68166676 | Msa0698030:CDS | 25.0% |
| ! | TCGTTTAGACAATGAATTAA+AGG | - | chr4_4:68166736-68166755 | Msa0698030:intron | 25.0% |
| ! | ATCATTTGATTATGCATTTG+TGG | - | chr4_4:68166797-68166816 | Msa0698030:intron | 25.0% |
| ! | TTGCATATTGTAACACATTA+TGG | - | chr4_4:68166889-68166908 | Msa0698030:CDS | 25.0% |
| !! | TCAATTGCAACTTTTCTTTT+TGG | + | chr4_4:68166966-68166985 | None:intergenic | 25.0% |
| ! | AATCAACAATCCTTTCTATT+GGG | - | chr4_4:68167021-68167040 | Msa0698030:intron | 25.0% |
| !! | TTATTTCTTTGTTCCTTTGA+TGG | + | chr4_4:68167078-68167097 | None:intergenic | 25.0% |
| TTGAGAAATTCATTAACTGC+TGG | - | chr4_4:68165175-68165194 | Msa0698030:three_prime_UTR | 30.0% | |
| GAAACAACAATTCAGAAGTA+TGG | - | chr4_4:68165432-68165451 | Msa0698030:CDS | 30.0% | |
| ! | TTTCATCACTTTCAGGTAAT+AGG | - | chr4_4:68165816-68165835 | Msa0698030:intron | 30.0% |
| TCAGGTAATAGGAATTGATA+TGG | - | chr4_4:68165827-68165846 | Msa0698030:intron | 30.0% | |
| !! | TTTTTACGTGTTACTAGTAC+TGG | - | chr4_4:68166335-68166354 | Msa0698030:intron | 30.0% |
| AAAACAATTCCATGAATTGC+AGG | - | chr4_4:68166761-68166780 | Msa0698030:intron | 30.0% | |
| AAACAATTCCATGAATTGCA+GGG | - | chr4_4:68166762-68166781 | Msa0698030:intron | 30.0% | |
| TTGTTGAAATTGGTGAAGAA+GGG | - | chr4_4:68166858-68166877 | Msa0698030:CDS | 30.0% | |
| TATTGTAACACATTATGGTC+TGG | - | chr4_4:68166894-68166913 | Msa0698030:CDS | 30.0% | |
| AGGAAATGGAAGATACAATA+AGG | - | chr4_4:68166940-68166959 | Msa0698030:intron | 30.0% | |
| GAATCAACAATCCTTTCTAT+TGG | - | chr4_4:68167020-68167039 | Msa0698030:intron | 30.0% | |
| ATCAACAATCCTTTCTATTG+GGG | - | chr4_4:68167022-68167041 | Msa0698030:intron | 30.0% | |
| TTGAGAAATTCATTAACTGC+TGG | - | chr4_4:68165175-68165194 | Msa0698030:three_prime_UTR | 30.0% | |
| GAAACAACAATTCAGAAGTA+TGG | - | chr4_4:68165432-68165451 | Msa0698030:CDS | 30.0% | |
| ! | TTTCATCACTTTCAGGTAAT+AGG | - | chr4_4:68165816-68165835 | Msa0698030:intron | 30.0% |
| TCAGGTAATAGGAATTGATA+TGG | - | chr4_4:68165827-68165846 | Msa0698030:intron | 30.0% | |
| !! | TTTTTACGTGTTACTAGTAC+TGG | - | chr4_4:68166335-68166354 | Msa0698030:intron | 30.0% |
| AAAACAATTCCATGAATTGC+AGG | - | chr4_4:68166761-68166780 | Msa0698030:intron | 30.0% | |
| AAACAATTCCATGAATTGCA+GGG | - | chr4_4:68166762-68166781 | Msa0698030:intron | 30.0% | |
| TTGTTGAAATTGGTGAAGAA+GGG | - | chr4_4:68166858-68166877 | Msa0698030:CDS | 30.0% | |
| TATTGTAACACATTATGGTC+TGG | - | chr4_4:68166894-68166913 | Msa0698030:CDS | 30.0% | |
| AGGAAATGGAAGATACAATA+AGG | - | chr4_4:68166940-68166959 | Msa0698030:intron | 30.0% | |
| GAATCAACAATCCTTTCTAT+TGG | - | chr4_4:68167020-68167039 | Msa0698030:intron | 30.0% | |
| ATCAACAATCCTTTCTATTG+GGG | - | chr4_4:68167022-68167041 | Msa0698030:intron | 30.0% | |
| ! | ATTATTACCTGAAGAAGTGC+TGG | + | chr4_4:68165263-68165282 | None:intergenic | 35.0% |
| ! | CTCAATTAATCTGGTTTCAG+TGG | + | chr4_4:68165295-68165314 | None:intergenic | 35.0% |
| ! | TTCAATTGTTCGTGCTCTTT+TGG | + | chr4_4:68165402-68165421 | None:intergenic | 35.0% |
| GAGTATAATGAATGTGCCTT+TGG | - | chr4_4:68165604-68165623 | Msa0698030:intron | 35.0% | |
| ATGAATTGTGCTTCATCCAA+AGG | + | chr4_4:68165623-68165642 | None:intergenic | 35.0% | |
| TTAGAAATTGGAGTCTTCAC+TGG | - | chr4_4:68165680-68165699 | Msa0698030:intron | 35.0% | |
| ! | GATAAAGAAGCATATGAGAC+AGG | - | chr4_4:68165849-68165868 | Msa0698030:intron | 35.0% |
| ! | ATAATAGTTCTTTTCGGTGG+AGG | - | chr4_4:68166139-68166158 | Msa0698030:intron | 35.0% |
| ! | TAATAGTTCTTTTCGGTGGA+GGG | - | chr4_4:68166140-68166159 | Msa0698030:intron | 35.0% |
| ! | AATCAATAGCGAGGTATCAT+AGG | - | chr4_4:68166169-68166188 | Msa0698030:intron | 35.0% |
| CAAACCTGAGAAATAGAAAC+CGG | + | chr4_4:68166299-68166318 | None:intergenic | 35.0% | |
| ! | TTCTATTTCTCAGGTTTGGA+TGG | - | chr4_4:68166301-68166320 | Msa0698030:intron | 35.0% |
| TATCATCCTTTATGTAGCAG+TGG | - | chr4_4:68166382-68166401 | Msa0698030:CDS | 35.0% | |
| !! | ATCATCGTGGCTTTATTGTA+TGG | - | chr4_4:68166423-68166442 | Msa0698030:CDS | 35.0% |
| !! | TCATCGTGGCTTTATTGTAT+GGG | - | chr4_4:68166424-68166443 | Msa0698030:CDS | 35.0% |
| TAGCAATATCGTCTTTGTGT+CGG | - | chr4_4:68166447-68166466 | Msa0698030:CDS | 35.0% | |
| AAACGAATTAGATGCTCTAG+AGG | + | chr4_4:68166722-68166741 | None:intergenic | 35.0% | |
| GTTGTTGAAATTGGTGAAGA+AGG | - | chr4_4:68166857-68166876 | Msa0698030:CDS | 35.0% | |
| ! | ATTATTACCTGAAGAAGTGC+TGG | + | chr4_4:68165263-68165282 | None:intergenic | 35.0% |
| ! | CTCAATTAATCTGGTTTCAG+TGG | + | chr4_4:68165295-68165314 | None:intergenic | 35.0% |
| ! | TTCAATTGTTCGTGCTCTTT+TGG | + | chr4_4:68165402-68165421 | None:intergenic | 35.0% |
| GAGTATAATGAATGTGCCTT+TGG | - | chr4_4:68165604-68165623 | Msa0698030:intron | 35.0% | |
| ATGAATTGTGCTTCATCCAA+AGG | + | chr4_4:68165623-68165642 | None:intergenic | 35.0% | |
| TTAGAAATTGGAGTCTTCAC+TGG | - | chr4_4:68165680-68165699 | Msa0698030:intron | 35.0% | |
| ! | GATAAAGAAGCATATGAGAC+AGG | - | chr4_4:68165849-68165868 | Msa0698030:intron | 35.0% |
| ! | ATAATAGTTCTTTTCGGTGG+AGG | - | chr4_4:68166139-68166158 | Msa0698030:intron | 35.0% |
| ! | TAATAGTTCTTTTCGGTGGA+GGG | - | chr4_4:68166140-68166159 | Msa0698030:intron | 35.0% |
| ! | AATCAATAGCGAGGTATCAT+AGG | - | chr4_4:68166169-68166188 | Msa0698030:intron | 35.0% |
| CAAACCTGAGAAATAGAAAC+CGG | + | chr4_4:68166299-68166318 | None:intergenic | 35.0% | |
| ! | TTCTATTTCTCAGGTTTGGA+TGG | - | chr4_4:68166301-68166320 | Msa0698030:intron | 35.0% |
| TATCATCCTTTATGTAGCAG+TGG | - | chr4_4:68166382-68166401 | Msa0698030:CDS | 35.0% | |
| !! | ATCATCGTGGCTTTATTGTA+TGG | - | chr4_4:68166423-68166442 | Msa0698030:CDS | 35.0% |
| !! | TCATCGTGGCTTTATTGTAT+GGG | - | chr4_4:68166424-68166443 | Msa0698030:CDS | 35.0% |
| TAGCAATATCGTCTTTGTGT+CGG | - | chr4_4:68166447-68166466 | Msa0698030:CDS | 35.0% | |
| AAACGAATTAGATGCTCTAG+AGG | + | chr4_4:68166722-68166741 | None:intergenic | 35.0% | |
| GTTGTTGAAATTGGTGAAGA+AGG | - | chr4_4:68166857-68166876 | Msa0698030:CDS | 35.0% | |
| !!! | TGGAGTTTTGAGGATGTTCT+TGG | + | chr4_4:68165243-68165262 | None:intergenic | 40.0% |
| ! | TTGTTCGTGCTCTTTTGGAT+AGG | + | chr4_4:68165397-68165416 | None:intergenic | 40.0% |
| AATGATACCTTGCCATCAGA+AGG | + | chr4_4:68165737-68165756 | None:intergenic | 40.0% | |
| ACTTCTGCCTTCTGAATGAA+GGG | + | chr4_4:68165879-68165898 | None:intergenic | 40.0% | |
| AACTTCTGCCTTCTGAATGA+AGG | + | chr4_4:68165880-68165899 | None:intergenic | 40.0% | |
| ATCCACAGTGATGCATTATC+AGG | - | chr4_4:68165918-68165937 | Msa0698030:intron | 40.0% | |
| ! | CGGTTTCTATTTCTCAGGTT+TGG | - | chr4_4:68166297-68166316 | Msa0698030:intron | 40.0% |
| !! | TACTAGTACTGGTTCACTCT+TGG | - | chr4_4:68166346-68166365 | Msa0698030:CDS | 40.0% |
| AGAGCAAGAGAAATGCTCAA+AGG | + | chr4_4:68166477-68166496 | None:intergenic | 40.0% | |
| TTAACACTCATCTTGTGCTG+TGG | - | chr4_4:68166542-68166561 | Msa0698030:intron | 40.0% | |
| CAAGATCTACAAGGTCTCAA+CGG | + | chr4_4:68166578-68166597 | None:intergenic | 40.0% | |
| TCACGAGCTGTTGTTGAAAT+TGG | - | chr4_4:68166848-68166867 | Msa0698030:CDS | 40.0% | |
| TTGAAATTGGTGAAGAAGGG+TGG | - | chr4_4:68166861-68166880 | Msa0698030:CDS | 40.0% | |
| ACAATCCTTTCTATTGGGGA+CGG | - | chr4_4:68167026-68167045 | Msa0698030:intron | 40.0% | |
| AGAGTTCTCTAAGCCATCAA+AGG | - | chr4_4:68167062-68167081 | Msa0698030:exon | 40.0% | |
| !!! | TGGAGTTTTGAGGATGTTCT+TGG | + | chr4_4:68165243-68165262 | None:intergenic | 40.0% |
| ! | TTGTTCGTGCTCTTTTGGAT+AGG | + | chr4_4:68165397-68165416 | None:intergenic | 40.0% |
| AATGATACCTTGCCATCAGA+AGG | + | chr4_4:68165737-68165756 | None:intergenic | 40.0% | |
| ACTTCTGCCTTCTGAATGAA+GGG | + | chr4_4:68165879-68165898 | None:intergenic | 40.0% | |
| AACTTCTGCCTTCTGAATGA+AGG | + | chr4_4:68165880-68165899 | None:intergenic | 40.0% | |
| ATCCACAGTGATGCATTATC+AGG | - | chr4_4:68165918-68165937 | Msa0698030:intron | 40.0% | |
| ! | CGGTTTCTATTTCTCAGGTT+TGG | - | chr4_4:68166297-68166316 | Msa0698030:intron | 40.0% |
| !! | TACTAGTACTGGTTCACTCT+TGG | - | chr4_4:68166346-68166365 | Msa0698030:CDS | 40.0% |
| AGAGCAAGAGAAATGCTCAA+AGG | + | chr4_4:68166477-68166496 | None:intergenic | 40.0% | |
| TTAACACTCATCTTGTGCTG+TGG | - | chr4_4:68166542-68166561 | Msa0698030:intron | 40.0% | |
| CAAGATCTACAAGGTCTCAA+CGG | + | chr4_4:68166578-68166597 | None:intergenic | 40.0% | |
| TCACGAGCTGTTGTTGAAAT+TGG | - | chr4_4:68166848-68166867 | Msa0698030:CDS | 40.0% | |
| TTGAAATTGGTGAAGAAGGG+TGG | - | chr4_4:68166861-68166880 | Msa0698030:CDS | 40.0% | |
| ACAATCCTTTCTATTGGGGA+CGG | - | chr4_4:68167026-68167045 | Msa0698030:intron | 40.0% | |
| AGAGTTCTCTAAGCCATCAA+AGG | - | chr4_4:68167062-68167081 | Msa0698030:exon | 40.0% | |
| !! | GATCAACTTGCTGTTTGCTC+TGG | - | chr4_4:68165204-68165223 | Msa0698030:three_prime_UTR | 45.0% |
| ! | TTTGCTCTGGACTTGAACCA+TGG | - | chr4_4:68165217-68165236 | Msa0698030:exon | 45.0% |
| TTTGAGGATGTTCTTGGCCA+TGG | + | chr4_4:68165237-68165256 | None:intergenic | 45.0% | |
| !!! | GAAGAAGTGCTGGAGTTTTG+AGG | + | chr4_4:68165253-68165272 | None:intergenic | 45.0% |
| CAAAACTCCAGCACTTCTTC+AGG | - | chr4_4:68165253-68165272 | Msa0698030:CDS | 45.0% | |
| ! | ATATTTGTTGGGTGTGGCAC+TGG | - | chr4_4:68165578-68165597 | Msa0698030:intron | 45.0% |
| AGGATTGCCCTTCATTCAGA+AGG | - | chr4_4:68165869-68165888 | Msa0698030:intron | 45.0% | |
| ! | TGCCTGATAATGCATCACTG+TGG | + | chr4_4:68165923-68165942 | None:intergenic | 45.0% |
| GGGAATCGAAATCAATAGCG+AGG | - | chr4_4:68166160-68166179 | Msa0698030:intron | 45.0% | |
| AGTCCTGTCTGATTGTGCAT+TGG | - | chr4_4:68166253-68166272 | Msa0698030:intron | 45.0% | |
| GTCCTGTCTGATTGTGCATT+GGG | - | chr4_4:68166254-68166273 | Msa0698030:intron | 45.0% | |
| TCCTGTCTGATTGTGCATTG+GGG | - | chr4_4:68166255-68166274 | Msa0698030:intron | 45.0% | |
| !! | TGTGCCGGTTTCTATTTCTC+AGG | - | chr4_4:68166292-68166311 | Msa0698030:intron | 45.0% |
| GAGACCTTGTAGATCTTGCT+CGG | - | chr4_4:68166580-68166599 | Msa0698030:CDS | 45.0% | |
| AGACCTTGTAGATCTTGCTC+GGG | - | chr4_4:68166581-68166600 | Msa0698030:CDS | 45.0% | |
| TAACCCGAGCAAGATCTACA+AGG | + | chr4_4:68166587-68166606 | None:intergenic | 45.0% | |
| CATGTTTGCCCTGCAATTCA+TGG | + | chr4_4:68166773-68166792 | None:intergenic | 45.0% | |
| TGCATTTGTGGATGCTGACA+AGG | - | chr4_4:68166809-68166828 | Msa0698030:intron | 45.0% | |
| CATTTCCTCATCCTCAGACA+TGG | + | chr4_4:68166928-68166947 | None:intergenic | 45.0% | |
| CATGTCTGAGGATGAGGAAA+TGG | - | chr4_4:68166926-68166945 | Msa0698030:intron | 45.0% | |
| TTACACCGTCCCCAATAGAA+AGG | + | chr4_4:68167034-68167053 | None:intergenic | 45.0% | |
| !! | GATCAACTTGCTGTTTGCTC+TGG | - | chr4_4:68165204-68165223 | Msa0698030:three_prime_UTR | 45.0% |
| ! | TTTGCTCTGGACTTGAACCA+TGG | - | chr4_4:68165217-68165236 | Msa0698030:exon | 45.0% |
| TTTGAGGATGTTCTTGGCCA+TGG | + | chr4_4:68165237-68165256 | None:intergenic | 45.0% | |
| !!! | GAAGAAGTGCTGGAGTTTTG+AGG | + | chr4_4:68165253-68165272 | None:intergenic | 45.0% |
| CAAAACTCCAGCACTTCTTC+AGG | - | chr4_4:68165253-68165272 | Msa0698030:CDS | 45.0% | |
| ! | ATATTTGTTGGGTGTGGCAC+TGG | - | chr4_4:68165578-68165597 | Msa0698030:intron | 45.0% |
| AGGATTGCCCTTCATTCAGA+AGG | - | chr4_4:68165869-68165888 | Msa0698030:intron | 45.0% | |
| ! | TGCCTGATAATGCATCACTG+TGG | + | chr4_4:68165923-68165942 | None:intergenic | 45.0% |
| GGGAATCGAAATCAATAGCG+AGG | - | chr4_4:68166160-68166179 | Msa0698030:intron | 45.0% | |
| AGTCCTGTCTGATTGTGCAT+TGG | - | chr4_4:68166253-68166272 | Msa0698030:intron | 45.0% | |
| GTCCTGTCTGATTGTGCATT+GGG | - | chr4_4:68166254-68166273 | Msa0698030:intron | 45.0% | |
| TCCTGTCTGATTGTGCATTG+GGG | - | chr4_4:68166255-68166274 | Msa0698030:intron | 45.0% | |
| !! | TGTGCCGGTTTCTATTTCTC+AGG | - | chr4_4:68166292-68166311 | Msa0698030:intron | 45.0% |
| GAGACCTTGTAGATCTTGCT+CGG | - | chr4_4:68166580-68166599 | Msa0698030:CDS | 45.0% | |
| AGACCTTGTAGATCTTGCTC+GGG | - | chr4_4:68166581-68166600 | Msa0698030:CDS | 45.0% | |
| TAACCCGAGCAAGATCTACA+AGG | + | chr4_4:68166587-68166606 | None:intergenic | 45.0% | |
| CATGTTTGCCCTGCAATTCA+TGG | + | chr4_4:68166773-68166792 | None:intergenic | 45.0% | |
| TGCATTTGTGGATGCTGACA+AGG | - | chr4_4:68166809-68166828 | Msa0698030:intron | 45.0% | |
| CATTTCCTCATCCTCAGACA+TGG | + | chr4_4:68166928-68166947 | None:intergenic | 45.0% | |
| CATGTCTGAGGATGAGGAAA+TGG | - | chr4_4:68166926-68166945 | Msa0698030:intron | 45.0% | |
| TTACACCGTCCCCAATAGAA+AGG | + | chr4_4:68167034-68167053 | None:intergenic | 45.0% | |
| GCTCTTGCTCTTCCTTCTGA+TGG | - | chr4_4:68165722-68165741 | Msa0698030:intron | 50.0% | |
| TGCTCTTCCTTCTGATGGCA+AGG | - | chr4_4:68165727-68165746 | Msa0698030:intron | 50.0% | |
| ! | ATAGCGAGGTATCATAGGCG+TGG | - | chr4_4:68166174-68166193 | Msa0698030:intron | 50.0% |
| ! | AGGAGCGAGTTGGATTGAGT+CGG | - | chr4_4:68166197-68166216 | Msa0698030:intron | 50.0% |
| ACCCCAATGCACAATCAGAC+AGG | + | chr4_4:68166259-68166278 | None:intergenic | 50.0% | |
| TCTGATTGTGCATTGGGGTC+TGG | - | chr4_4:68166260-68166279 | Msa0698030:intron | 50.0% | |
| ATCGCGCCACTGCTACATAA+AGG | + | chr4_4:68166391-68166410 | None:intergenic | 50.0% | |
| ! | TGGTTCTGTAGCCATGTCTG+AGG | - | chr4_4:68166914-68166933 | Msa0698030:intron | 50.0% |
| TGTAGCCATGTCTGAGGATG+AGG | - | chr4_4:68166920-68166939 | Msa0698030:intron | 50.0% | |
| GCTCTTGCTCTTCCTTCTGA+TGG | - | chr4_4:68165722-68165741 | Msa0698030:intron | 50.0% | |
| TGCTCTTCCTTCTGATGGCA+AGG | - | chr4_4:68165727-68165746 | Msa0698030:intron | 50.0% | |
| ! | ATAGCGAGGTATCATAGGCG+TGG | - | chr4_4:68166174-68166193 | Msa0698030:intron | 50.0% |
| ! | AGGAGCGAGTTGGATTGAGT+CGG | - | chr4_4:68166197-68166216 | Msa0698030:intron | 50.0% |
| ACCCCAATGCACAATCAGAC+AGG | + | chr4_4:68166259-68166278 | None:intergenic | 50.0% | |
| TCTGATTGTGCATTGGGGTC+TGG | - | chr4_4:68166260-68166279 | Msa0698030:intron | 50.0% | |
| ATCGCGCCACTGCTACATAA+AGG | + | chr4_4:68166391-68166410 | None:intergenic | 50.0% | |
| ! | TGGTTCTGTAGCCATGTCTG+AGG | - | chr4_4:68166914-68166933 | Msa0698030:intron | 50.0% |
| TGTAGCCATGTCTGAGGATG+AGG | - | chr4_4:68166920-68166939 | Msa0698030:intron | 50.0% | |
| ! | TGTGCATTGGGGTCTGGTTC+TGG | - | chr4_4:68166266-68166285 | Msa0698030:intron | 55.0% |
| ! | TGTGCATTGGGGTCTGGTTC+TGG | - | chr4_4:68166266-68166285 | Msa0698030:intron | 55.0% |
| !! | TTGTTGGGTGTGGCACTGGC+AGG | - | chr4_4:68165582-68165601 | Msa0698030:intron | 60.0% |
| ! | GCGAGGTATCATAGGCGTGG+AGG | - | chr4_4:68166177-68166196 | Msa0698030:intron | 60.0% |
| ATAGGCGTGGAGGAGCGAGT+TGG | - | chr4_4:68166187-68166206 | Msa0698030:intron | 60.0% | |
| !! | GTCTGGTTCTGGCTCTGTGC+CGG | - | chr4_4:68166277-68166296 | Msa0698030:intron | 60.0% |
| !! | TTGTTGGGTGTGGCACTGGC+AGG | - | chr4_4:68165582-68165601 | Msa0698030:intron | 60.0% |
| ! | GCGAGGTATCATAGGCGTGG+AGG | - | chr4_4:68166177-68166196 | Msa0698030:intron | 60.0% |
| ATAGGCGTGGAGGAGCGAGT+TGG | - | chr4_4:68166187-68166206 | Msa0698030:intron | 60.0% | |
| !! | GTCTGGTTCTGGCTCTGTGC+CGG | - | chr4_4:68166277-68166296 | Msa0698030:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 68165170 | 68167133 | 68165170 | ID=Msa0698030;Name=Msa0698030 |
| chr4_4 | mRNA | 68165170 | 68167133 | 68165170 | ID=Msa0698030-mRNA-1;Parent=Msa0698030;Name=Msa0698030-mRNA-1;_AED=0.14;_eAED=0.21;_QI=66|0.6|0.83|1|1|1|6|60|251 |
| chr4_4 | exon | 68165170 | 68165520 | 68165170 | ID=Msa0698030-mRNA-1:exon:20261;Parent=Msa0698030-mRNA-1 |
| chr4_4 | exon | 68165990 | 68166055 | 68165990 | ID=Msa0698030-mRNA-1:exon:20260;Parent=Msa0698030-mRNA-1 |
| chr4_4 | exon | 68166344 | 68166472 | 68166344 | ID=Msa0698030-mRNA-1:exon:20259;Parent=Msa0698030-mRNA-1 |
| chr4_4 | exon | 68166555 | 68166699 | 68166555 | ID=Msa0698030-mRNA-1:exon:20258;Parent=Msa0698030-mRNA-1 |
| chr4_4 | exon | 68166843 | 68166928 | 68166843 | ID=Msa0698030-mRNA-1:exon:20257;Parent=Msa0698030-mRNA-1 |
| chr4_4 | exon | 68167029 | 68167133 | 68167029 | ID=Msa0698030-mRNA-1:exon:20256;Parent=Msa0698030-mRNA-1 |
| chr4_4 | five_prime_UTR | 68167068 | 68167133 | 68167068 | ID=Msa0698030-mRNA-1:five_prime_utr;Parent=Msa0698030-mRNA-1 |
| chr4_4 | CDS | 68167029 | 68167067 | 68167029 | ID=Msa0698030-mRNA-1:cds;Parent=Msa0698030-mRNA-1 |
| chr4_4 | CDS | 68166843 | 68166928 | 68166843 | ID=Msa0698030-mRNA-1:cds;Parent=Msa0698030-mRNA-1 |
| chr4_4 | CDS | 68166555 | 68166699 | 68166555 | ID=Msa0698030-mRNA-1:cds;Parent=Msa0698030-mRNA-1 |
| chr4_4 | CDS | 68166344 | 68166472 | 68166344 | ID=Msa0698030-mRNA-1:cds;Parent=Msa0698030-mRNA-1 |
| chr4_4 | CDS | 68165990 | 68166055 | 68165990 | ID=Msa0698030-mRNA-1:cds;Parent=Msa0698030-mRNA-1 |
| chr4_4 | CDS | 68165230 | 68165520 | 68165230 | ID=Msa0698030-mRNA-1:cds;Parent=Msa0698030-mRNA-1 |
| chr4_4 | three_prime_UTR | 68165170 | 68165229 | 68165170 | ID=Msa0698030-mRNA-1:three_prime_utr;Parent=Msa0698030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
