Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0304510 | XP_003597879.1 | 100.000 | 180 | 0 | 0 | 1 | 180 | 1 | 180 | 4.40e-126 | 362 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0304510 | sp|Q5RC30|SC11C_PONAB | 58.523 | 176 | 71 | 2 | 6 | 180 | 17 | 191 | 2.51e-69 | 211 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0304510 | Q2HUB9 | 100.000 | 180 | 0 | 0 | 1 | 180 | 1 | 180 | 2.10e-126 | 362 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001450 | Msa0304510 | 0.831984 | 1.224199e-55 | -8.615850e-47 |
Msa0003700 | Msa0304510 | 0.833101 | 6.471701e-56 | -8.615850e-47 |
Msa0003720 | Msa0304510 | 0.801709 | 7.924404e-49 | -8.615850e-47 |
Msa0015390 | Msa0304510 | 0.832160 | 1.107309e-55 | -8.615850e-47 |
Msa0017510 | Msa0304510 | 0.802318 | 5.939487e-49 | -8.615850e-47 |
Msa0027230 | Msa0304510 | 0.831171 | 1.941516e-55 | -8.615850e-47 |
Msa0027260 | Msa0304510 | 0.856056 | 4.162870e-62 | -8.615850e-47 |
Msa0028420 | Msa0304510 | 0.805183 | 1.509746e-49 | -8.615850e-47 |
Msa0029310 | Msa0304510 | 0.844597 | 6.851506e-59 | -8.615850e-47 |
Msa0030180 | Msa0304510 | 0.807177 | 5.742548e-50 | -8.615850e-47 |
Msa0032260 | Msa0304510 | 0.800367 | 1.490081e-48 | -8.615850e-47 |
Msa0039900 | Msa0304510 | -0.809326 | 2.000005e-50 | -8.615850e-47 |
Msa0040690 | Msa0304510 | 0.803993 | 2.674252e-49 | -8.615850e-47 |
Msa0044000 | Msa0304510 | 0.826340 | 2.861898e-54 | -8.615850e-47 |
Msa0048180 | Msa0304510 | 0.800173 | 1.632059e-48 | -8.615850e-47 |
Msa0052730 | Msa0304510 | 0.801565 | 8.478988e-49 | -8.615850e-47 |
Msa0061340 | Msa0304510 | 0.803000 | 4.296139e-49 | -8.615850e-47 |
Msa0063890 | Msa0304510 | 0.806393 | 8.409480e-50 | -8.615850e-47 |
Msa0069330 | Msa0304510 | 0.813748 | 2.187545e-51 | -8.615850e-47 |
Msa0074320 | Msa0304510 | 0.807035 | 6.151511e-50 | -8.615850e-47 |
Msa0075170 | Msa0304510 | 0.812167 | 4.859245e-51 | -8.615850e-47 |
Msa0075220 | Msa0304510 | 0.811440 | 6.993213e-51 | -8.615850e-47 |
Msa0077680 | Msa0304510 | 0.811760 | 5.959577e-51 | -8.615850e-47 |
Msa0090360 | Msa0304510 | 0.800949 | 1.133914e-48 | -8.615850e-47 |
Msa0090520 | Msa0304510 | 0.808868 | 2.506934e-50 | -8.615850e-47 |
Msa0090570 | Msa0304510 | 0.839892 | 1.207508e-57 | -8.615850e-47 |
Msa0101440 | Msa0304510 | 0.809619 | 1.729959e-50 | -8.615850e-47 |
Msa0104120 | Msa0304510 | 0.801831 | 7.478124e-49 | -8.615850e-47 |
Msa0104550 | Msa0304510 | 0.814959 | 1.181292e-51 | -8.615850e-47 |
Msa0110970 | Msa0304510 | 0.815420 | 9.330100e-52 | -8.615850e-47 |
Msa0116770 | Msa0304510 | 0.806681 | 7.309945e-50 | -8.615850e-47 |
Msa0122970 | Msa0304510 | 0.805423 | 1.344503e-49 | -8.615850e-47 |
Msa0124060 | Msa0304510 | 0.822073 | 2.878798e-53 | -8.615850e-47 |
Msa0127800 | Msa0304510 | 0.838513 | 2.749644e-57 | -8.615850e-47 |
Msa0128860 | Msa0304510 | 0.812477 | 4.156647e-51 | -8.615850e-47 |
Msa0137990 | Msa0304510 | 0.809492 | 1.842501e-50 | -8.615850e-47 |
Msa0140820 | Msa0304510 | 0.810412 | 1.167788e-50 | -8.615850e-47 |
Msa0145580 | Msa0304510 | 0.803717 | 3.050478e-49 | -8.615850e-47 |
Msa0146260 | Msa0304510 | 0.802850 | 4.612293e-49 | -8.615850e-47 |
Msa0146280 | Msa0304510 | 0.806445 | 8.197997e-50 | -8.615850e-47 |
Msa0157290 | Msa0304510 | 0.803300 | 3.722807e-49 | -8.615850e-47 |
Msa0165210 | Msa0304510 | 0.807729 | 4.383456e-50 | -8.615850e-47 |
Msa0168500 | Msa0304510 | 0.833050 | 6.662620e-56 | -8.615850e-47 |
Msa0174730 | Msa0304510 | 0.811969 | 5.364814e-51 | -8.615850e-47 |
Msa0183850 | Msa0304510 | 0.814726 | 1.330481e-51 | -8.615850e-47 |
Msa0183900 | Msa0304510 | 0.812130 | 4.949965e-51 | -8.615850e-47 |
Msa0184040 | Msa0304510 | 0.801569 | 8.462512e-49 | -8.615850e-47 |
Msa0187120 | Msa0304510 | 0.813336 | 2.694947e-51 | -8.615850e-47 |
Msa0188350 | Msa0304510 | 0.825916 | 3.611325e-54 | -8.615850e-47 |
Msa0194480 | Msa0304510 | 0.801678 | 8.040533e-49 | -8.615850e-47 |
Msa0195630 | Msa0304510 | 0.803721 | 3.045540e-49 | -8.615850e-47 |
Msa0195980 | Msa0304510 | 0.831556 | 1.561047e-55 | -8.615850e-47 |
Msa0204960 | Msa0304510 | 0.822577 | 2.199466e-53 | -8.615850e-47 |
Msa0207350 | Msa0304510 | 0.815389 | 9.480168e-52 | -8.615850e-47 |
Msa0211150 | Msa0304510 | 0.844646 | 6.644078e-59 | -8.615850e-47 |
Msa0214550 | Msa0304510 | 0.845977 | 2.899926e-59 | -8.615850e-47 |
Msa0220240 | Msa0304510 | 0.801738 | 7.816629e-49 | -8.615850e-47 |
Msa0220250 | Msa0304510 | 0.838807 | 2.309205e-57 | -8.615850e-47 |
Msa0230150 | Msa0304510 | 0.814056 | 1.870747e-51 | -8.615850e-47 |
Msa0237410 | Msa0304510 | 0.803214 | 3.878473e-49 | -8.615850e-47 |
Msa0241800 | Msa0304510 | 0.824638 | 7.244128e-54 | -8.615850e-47 |
Msa0242410 | Msa0304510 | 0.810894 | 9.183959e-51 | -8.615850e-47 |
Msa0255090 | Msa0304510 | 0.821126 | 4.763908e-53 | -8.615850e-47 |
Msa0256840 | Msa0304510 | 0.832742 | 7.944820e-56 | -8.615850e-47 |
Msa0257490 | Msa0304510 | 0.811153 | 8.073774e-51 | -8.615850e-47 |
Msa0259210 | Msa0304510 | 0.806205 | 9.210585e-50 | -8.615850e-47 |
Msa0259380 | Msa0304510 | 0.815475 | 9.069652e-52 | -8.615850e-47 |
Msa0261550 | Msa0304510 | 0.844125 | 9.174601e-59 | -8.615850e-47 |
Msa0262340 | Msa0304510 | 0.808151 | 3.566090e-50 | -8.615850e-47 |
Msa0264150 | Msa0304510 | 0.813707 | 2.233810e-51 | -8.615850e-47 |
Msa0281530 | Msa0304510 | 0.836688 | 8.080455e-57 | -8.615850e-47 |
Msa0288080 | Msa0304510 | 0.806508 | 7.951810e-50 | -8.615850e-47 |
Msa0292400 | Msa0304510 | 0.823724 | 1.187106e-53 | -8.615850e-47 |
Msa0294160 | Msa0304510 | 0.809138 | 2.194105e-50 | -8.615850e-47 |
Msa0295540 | Msa0304510 | 0.816223 | 6.178818e-52 | -8.615850e-47 |
Msa0296790 | Msa0304510 | 0.803623 | 3.191335e-49 | -8.615850e-47 |
Msa0300690 | Msa0304510 | 0.818772 | 1.646053e-52 | -8.615850e-47 |
Msa0304430 | Msa0304510 | 0.822862 | 1.887678e-53 | -8.615850e-47 |
Msa0304510 | Msa0305030 | 0.802001 | 6.900735e-49 | -8.615850e-47 |
Msa0304510 | Msa0317970 | 0.803427 | 3.504127e-49 | -8.615850e-47 |
Msa0304510 | Msa0318700 | 0.808535 | 2.953101e-50 | -8.615850e-47 |
Msa0304510 | Msa0320590 | 0.829322 | 5.491734e-55 | -8.615850e-47 |
Msa0304510 | Msa0322900 | 0.806624 | 7.516463e-50 | -8.615850e-47 |
Msa0304510 | Msa0326480 | 0.802789 | 4.748221e-49 | -8.615850e-47 |
Msa0304510 | Msa0336320 | 0.807612 | 4.642988e-50 | -8.615850e-47 |
Msa0304510 | Msa0339500 | 0.826339 | 2.864517e-54 | -8.615850e-47 |
Msa0304510 | Msa0343850 | 0.836667 | 8.183398e-57 | -8.615850e-47 |
Msa0304510 | Msa0357900 | 0.808359 | 3.220336e-50 | -8.615850e-47 |
Msa0304510 | Msa0360210 | 0.811957 | 5.398818e-51 | -8.615850e-47 |
Msa0304510 | Msa0363790 | 0.811180 | 7.965352e-51 | -8.615850e-47 |
Msa0304510 | Msa0381610 | -0.800147 | 1.651426e-48 | -8.615850e-47 |
Msa0304510 | Msa0390400 | -0.808450 | 3.079093e-50 | -8.615850e-47 |
Msa0304510 | Msa0395820 | 0.805386 | 1.368985e-49 | -8.615850e-47 |
Msa0304510 | Msa0402790 | 0.806674 | 7.334608e-50 | -8.615850e-47 |
Msa0304510 | Msa0406770 | 0.811991 | 5.307493e-51 | -8.615850e-47 |
Msa0304510 | Msa0410650 | 0.812221 | 4.727496e-51 | -8.615850e-47 |
Msa0304510 | Msa0422850 | 0.831215 | 1.894392e-55 | -8.615850e-47 |
Msa0304510 | Msa0422930 | 0.832157 | 1.109296e-55 | -8.615850e-47 |
Msa0304510 | Msa0424790 | 0.801736 | 7.823428e-49 | -8.615850e-47 |
Msa0304510 | Msa0436490 | -0.801670 | 8.071688e-49 | -8.615850e-47 |
Msa0304510 | Msa0450400 | -0.820140 | 8.029260e-53 | -8.615850e-47 |
Msa0304510 | Msa0453350 | 0.820476 | 6.723362e-53 | -8.615850e-47 |
Msa0304510 | Msa0464680 | 0.807770 | 4.296536e-50 | -8.615850e-47 |
Msa0304510 | Msa0467060 | 0.802981 | 4.334239e-49 | -8.615850e-47 |
Msa0304510 | Msa0479170 | 0.801210 | 1.002348e-48 | -8.615850e-47 |
Msa0304510 | Msa0485240 | 0.810623 | 1.051294e-50 | -8.615850e-47 |
Msa0304510 | Msa0495320 | 0.809234 | 2.092483e-50 | -8.615850e-47 |
Msa0304510 | Msa0497210 | 0.803697 | 3.081123e-49 | -8.615850e-47 |
Msa0304510 | Msa0504480 | 0.813989 | 1.935802e-51 | -8.615850e-47 |
Msa0304510 | Msa0507680 | 0.800719 | 1.262934e-48 | -8.615850e-47 |
Msa0304510 | Msa0508590 | 0.802376 | 5.777267e-49 | -8.615850e-47 |
Msa0304510 | Msa0524500 | 0.820735 | 5.861372e-53 | -8.615850e-47 |
Msa0304510 | Msa0526540 | 0.807066 | 6.059498e-50 | -8.615850e-47 |
Msa0304510 | Msa0527020 | 0.808975 | 2.377852e-50 | -8.615850e-47 |
Msa0304510 | Msa0529040 | 0.806745 | 7.084957e-50 | -8.615850e-47 |
Msa0304510 | Msa0529890 | 0.803425 | 3.508341e-49 | -8.615850e-47 |
Msa0304510 | Msa0546540 | 0.822022 | 2.958401e-53 | -8.615850e-47 |
Msa0304510 | Msa0547160 | 0.806455 | 8.156254e-50 | -8.615850e-47 |
Msa0304510 | Msa0547890 | 0.812325 | 4.487792e-51 | -8.615850e-47 |
Msa0304510 | Msa0556060 | 0.829853 | 4.079548e-55 | -8.615850e-47 |
Msa0304510 | Msa0581110 | 0.816162 | 6.376143e-52 | -8.615850e-47 |
Msa0304510 | Msa0607910 | 0.802342 | 5.871190e-49 | -8.615850e-47 |
Msa0304510 | Msa0610840 | -0.816144 | 6.434252e-52 | -8.615850e-47 |
Msa0304510 | Msa0615440 | 0.808444 | 3.087679e-50 | -8.615850e-47 |
Msa0304510 | Msa0615710 | 0.806287 | 8.849794e-50 | -8.615850e-47 |
Msa0304510 | Msa0616160 | 0.803995 | 2.671029e-49 | -8.615850e-47 |
Msa0304510 | Msa0625720 | 0.801426 | 9.055765e-49 | -8.615850e-47 |
Msa0304510 | Msa0641670 | 0.802437 | 5.611478e-49 | -8.615850e-47 |
Msa0304510 | Msa0642720 | 0.806556 | 7.765789e-50 | -8.615850e-47 |
Msa0304510 | Msa0642970 | 0.809226 | 2.100706e-50 | -8.615850e-47 |
Msa0304510 | Msa0643560 | 0.811467 | 6.898614e-51 | -8.615850e-47 |
Msa0304510 | Msa0669520 | 0.806052 | 9.920207e-50 | -8.615850e-47 |
Msa0304510 | Msa0682680 | 0.804048 | 2.604229e-49 | -8.615850e-47 |
Msa0304510 | Msa0683730 | 0.823533 | 1.316363e-53 | -8.615850e-47 |
Msa0304510 | Msa0686560 | 0.800694 | 1.277968e-48 | -8.615850e-47 |
Msa0304510 | Msa0696450 | 0.810232 | 1.276866e-50 | -8.615850e-47 |
Msa0304510 | Msa0698030 | 0.805272 | 1.445863e-49 | -8.615850e-47 |
Msa0304510 | Msa0698490 | 0.809280 | 2.045924e-50 | -8.615850e-47 |
Msa0304510 | Msa0698540 | 0.813191 | 2.900012e-51 | -8.615850e-47 |
Msa0304510 | Msa0698660 | 0.808164 | 3.543035e-50 | -8.615850e-47 |
Msa0304510 | Msa0721280 | 0.802290 | 6.018497e-49 | -8.615850e-47 |
Msa0304510 | Msa0722960 | 0.804460 | 2.137892e-49 | -8.615850e-47 |
Msa0304510 | Msa0725050 | 0.834359 | 3.137526e-56 | -8.615850e-47 |
Msa0304510 | Msa0729720 | 0.829977 | 3.806075e-55 | -8.615850e-47 |
Msa0304510 | Msa0730430 | 0.820731 | 5.874971e-53 | -8.615850e-47 |
Msa0304510 | Msa0731270 | 0.817332 | 3.484418e-52 | -8.615850e-47 |
Msa0304510 | Msa0740640 | 0.824047 | 9.972255e-54 | -8.615850e-47 |
Msa0304510 | Msa0741240 | 0.800307 | 1.532311e-48 | -8.615850e-47 |
Msa0304510 | Msa0743720 | 0.821999 | 2.995038e-53 | -8.615850e-47 |
Msa0304510 | Msa0763830 | 0.800090 | 1.696728e-48 | -8.615850e-47 |
Msa0304510 | Msa0765910 | 0.809831 | 1.557728e-50 | -8.615850e-47 |
Msa0304510 | Msa0766740 | 0.810346 | 1.206559e-50 | -8.615850e-47 |
Msa0304510 | Msa0770080 | 0.818373 | 2.027593e-52 | -8.615850e-47 |
Msa0304510 | Msa0771280 | 0.821052 | 4.956745e-53 | -8.615850e-47 |
Msa0304510 | Msa0785210 | 0.815852 | 7.476544e-52 | -8.615850e-47 |
Msa0304510 | Msa0793800 | 0.801918 | 7.177256e-49 | -8.615850e-47 |
Msa0304510 | Msa0806800 | 0.821788 | 3.352221e-53 | -8.615850e-47 |
Msa0304510 | Msa0808080 | 0.805020 | 1.632997e-49 | -8.615850e-47 |
Msa0304510 | Msa0820990 | 0.805721 | 1.164164e-49 | -8.615850e-47 |
Msa0304510 | Msa0826150 | 0.819155 | 1.347069e-52 | -8.615850e-47 |
Msa0304510 | Msa0831530 | 0.803622 | 3.192554e-49 | -8.615850e-47 |
Msa0304510 | Msa0832340 | 0.832819 | 7.606151e-56 | -8.615850e-47 |
Msa0304510 | Msa0835280 | 0.801993 | 6.928350e-49 | -8.615850e-47 |
Msa0304510 | Msa0841340 | 0.808235 | 3.422450e-50 | -8.615850e-47 |
Msa0304510 | Msa0844570 | 0.833894 | 4.103358e-56 | -8.615850e-47 |
Msa0304510 | Msa0847770 | 0.807120 | 5.903632e-50 | -8.615850e-47 |
Msa0304510 | Msa0849030 | 0.815915 | 7.235998e-52 | -8.615850e-47 |
Msa0304510 | Msa0861510 | 0.803585 | 3.250430e-49 | -8.615850e-47 |
Msa0304510 | Msa0861870 | 0.811640 | 6.327733e-51 | -8.615850e-47 |
Msa0304510 | Msa0876190 | 0.878999 | 1.781747e-69 | -8.615850e-47 |
Msa0304510 | Msa0927380 | 0.804260 | 2.352807e-49 | -8.615850e-47 |
Msa0304510 | Msa0933380 | 0.830175 | 3.405881e-55 | -8.615850e-47 |
Msa0304510 | Msa0938480 | 0.824844 | 6.477443e-54 | -8.615850e-47 |
Msa0304510 | Msa0945110 | 0.825551 | 4.406270e-54 | -8.615850e-47 |
Msa0304510 | Msa0949590 | 0.815735 | 7.938307e-52 | -8.615850e-47 |
Msa0304510 | Msa0969200 | 0.810784 | 9.704257e-51 | -8.615850e-47 |
Msa0304510 | Msa0971160 | 0.822553 | 2.227825e-53 | -8.615850e-47 |
Msa0304510 | Msa0999430 | 0.808509 | 2.990984e-50 | -8.615850e-47 |
Msa0304510 | Msa1004600 | 0.803444 | 3.475595e-49 | -8.615850e-47 |
Msa0304510 | Msa1019000 | 0.830176 | 3.403971e-55 | -8.615850e-47 |
Msa0304510 | Msa1019240 | 0.800085 | 1.700341e-48 | -8.615850e-47 |
Msa0304510 | Msa1019260 | 0.807617 | 4.630476e-50 | -8.615850e-47 |
Msa0304510 | Msa1029070 | 0.803656 | 3.141798e-49 | -8.615850e-47 |
Msa0304510 | Msa1037420 | 0.814485 | 1.504522e-51 | -8.615850e-47 |
Msa0304510 | Msa1050910 | 0.800684 | 1.284030e-48 | -8.615850e-47 |
Msa0304510 | Msa1052830 | 0.807622 | 4.619855e-50 | -8.615850e-47 |
Msa0304510 | Msa1065390 | 0.801801 | 7.584972e-49 | -8.615850e-47 |
Msa0304510 | Msa1066490 | 0.810018 | 1.419637e-50 | -8.615850e-47 |
Msa0304510 | Msa1079230 | 0.822229 | 2.648484e-53 | -8.615850e-47 |
Msa0304510 | Msa1081150 | 0.809523 | 1.814606e-50 | -8.615850e-47 |
Msa0304510 | Msa1081930 | 0.801280 | 9.698701e-49 | -8.615850e-47 |
Msa0304510 | Msa1085200 | 0.811421 | 7.060978e-51 | -8.615850e-47 |
Msa0304510 | Msa1089450 | 0.807690 | 4.467982e-50 | -8.615850e-47 |
Msa0304510 | Msa1093840 | 0.822726 | 2.029794e-53 | -8.615850e-47 |
Msa0304510 | Msa1100050 | 0.810899 | 9.163467e-51 | -8.615850e-47 |
Msa0304510 | Msa1104090 | 0.810866 | 9.315125e-51 | -8.615850e-47 |
Msa0304510 | Msa1104140 | 0.809769 | 1.606275e-50 | -8.615850e-47 |
Msa0304510 | Msa1104210 | 0.806695 | 7.260865e-50 | -8.615850e-47 |
Msa0304510 | Msa1106700 | 0.858840 | 6.250618e-63 | -8.615850e-47 |
Msa0304510 | Msa1118330 | 0.813940 | 1.984115e-51 | -8.615850e-47 |
Msa0304510 | Msa1123380 | 0.803163 | 3.975203e-49 | -8.615850e-47 |
Msa0304510 | Msa1123810 | 0.806853 | 6.723439e-50 | -8.615850e-47 |
Msa0304510 | Msa1124110 | 0.815276 | 1.004563e-51 | -8.615850e-47 |
Msa0304510 | Msa1126830 | 0.814602 | 1.417360e-51 | -8.615850e-47 |
Msa0304510 | Msa1128600 | 0.813864 | 2.062286e-51 | -8.615850e-47 |
Msa0304510 | Msa1134110 | 0.803426 | 3.505180e-49 | -8.615850e-47 |
Msa0304510 | Msa1135470 | 0.816449 | 5.497829e-52 | -8.615850e-47 |
Msa0304510 | Msa1137570 | 0.830171 | 3.412362e-55 | -8.615850e-47 |
Msa0304510 | Msa1147900 | 0.813680 | 2.263973e-51 | -8.615850e-47 |
Msa0304510 | Msa1150710 | 0.807007 | 6.236819e-50 | -8.615850e-47 |
Msa0304510 | Msa1154710 | 0.809135 | 2.197906e-50 | -8.615850e-47 |
Msa0304510 | Msa1156160 | 0.807673 | 4.505294e-50 | -8.615850e-47 |
Msa0304510 | Msa1157870 | 0.820348 | 7.193457e-53 | -8.615850e-47 |
Msa0304510 | Msa1168160 | 0.811886 | 5.594687e-51 | -8.615850e-47 |
Msa0304510 | Msa1168950 | 0.816824 | 4.530259e-52 | -8.615850e-47 |
Msa0304510 | Msa1169040 | 0.805936 | 1.049106e-49 | -8.615850e-47 |
Msa0304510 | Msa1174040 | 0.803074 | 4.146811e-49 | -8.615850e-47 |
Msa0304510 | Msa1182770 | 0.802135 | 6.476487e-49 | -8.615850e-47 |
Msa0304510 | Msa1189070 | 0.818216 | 2.201113e-52 | -8.615850e-47 |
Msa0304510 | Msa1193290 | 0.809956 | 1.464294e-50 | -8.615850e-47 |
Msa0304510 | Msa1196440 | 0.810336 | 1.212587e-50 | -8.615850e-47 |
Msa0304510 | Msa1199570 | 0.811554 | 6.606901e-51 | -8.615850e-47 |
Msa0304510 | Msa1199990 | 0.802177 | 6.348431e-49 | -8.615850e-47 |
Msa0304510 | Msa1209460 | 0.807027 | 6.177618e-50 | -8.615850e-47 |
Msa0304510 | Msa1210020 | 0.800723 | 1.260559e-48 | -8.615850e-47 |
Msa0304510 | Msa1216260 | 0.804533 | 2.063747e-49 | -8.615850e-47 |
Msa0304510 | Msa1225700 | 0.810094 | 1.367338e-50 | -8.615850e-47 |
Msa0304510 | Msa1232740 | 0.808188 | 3.501057e-50 | -8.615850e-47 |
Msa0304510 | Msa1243740 | -0.814527 | 1.472058e-51 | -8.615850e-47 |
Msa0304510 | Msa1256470 | 0.813461 | 2.529634e-51 | -8.615850e-47 |
Msa0304510 | Msa1262890 | 0.800914 | 1.152197e-48 | -8.615850e-47 |
Msa0304510 | Msa1274520 | 0.802193 | 6.301750e-49 | -8.615850e-47 |
Msa0304510 | Msa1275360 | 0.802341 | 5.874677e-49 | -8.615850e-47 |
Msa0304510 | Msa1276660 | 0.829022 | 6.494718e-55 | -8.615850e-47 |
Msa0304510 | Msa1283990 | 0.803393 | 3.562402e-49 | -8.615850e-47 |
Msa0304510 | Msa1284550 | 0.805412 | 1.351529e-49 | -8.615850e-47 |
Msa0304510 | Msa1285550 | 0.829663 | 4.537768e-55 | -8.615850e-47 |
Msa0304510 | Msa1286800 | 0.800788 | 1.223076e-48 | -8.615850e-47 |
Msa0304510 | Msa1288050 | 0.805195 | 1.500779e-49 | -8.615850e-47 |
Msa0304510 | Msa1294820 | 0.805398 | 1.360949e-49 | -8.615850e-47 |
Msa0304510 | Msa1302830 | 0.802569 | 5.270830e-49 | -8.615850e-47 |
Msa0304510 | Msa1307600 | 0.812396 | 4.330695e-51 | -8.615850e-47 |
Msa0304510 | Msa1313320 | 0.811558 | 6.594069e-51 | -8.615850e-47 |
Msa0304510 | Msa1328710 | 0.813154 | 2.954973e-51 | -8.615850e-47 |
Msa0304510 | Msa1345360 | 0.808445 | 3.085688e-50 | -8.615850e-47 |
Msa0304510 | Msa1353470 | 0.830655 | 2.598782e-55 | -8.615850e-47 |
Msa0304510 | Msa1353980 | 0.801466 | 8.885210e-49 | -8.615850e-47 |
Msa0304510 | Msa1361400 | 0.810431 | 1.156503e-50 | -8.615850e-47 |
Msa0304510 | Msa1363330 | 0.808635 | 2.811231e-50 | -8.615850e-47 |
Msa0304510 | Msa1367590 | 0.808306 | 3.304047e-50 | -8.615850e-47 |
Msa0304510 | Msa1369150 | 0.812048 | 5.157034e-51 | -8.615850e-47 |
Msa0304510 | Msa1370070 | -0.817523 | 3.155342e-52 | -8.615850e-47 |
Msa0304510 | Msa1373330 | 0.812004 | 5.272391e-51 | -8.615850e-47 |
Msa0304510 | Msa1374040 | 0.805512 | 1.287928e-49 | -8.615850e-47 |
Msa0304510 | Msa1374060 | 0.807281 | 5.457220e-50 | -8.615850e-47 |
Msa0304510 | Msa1379500 | 0.806975 | 6.334336e-50 | -8.615850e-47 |
Msa0304510 | Msa1379760 | 0.807263 | 5.505901e-50 | -8.615850e-47 |
Msa0304510 | Msa1382560 | 0.804590 | 2.008134e-49 | -8.615850e-47 |
Msa0304510 | Msa1385770 | 0.810667 | 1.028801e-50 | -8.615850e-47 |
Msa0304510 | Msa1386600 | 0.809628 | 1.722430e-50 | -8.615850e-47 |
Msa0304510 | Msa1392910 | 0.804899 | 1.731100e-49 | -8.615850e-47 |
Msa0304510 | Msa1394290 | 0.801322 | 9.510274e-49 | -8.615850e-47 |
Msa0304510 | Msa1398090 | 0.806308 | 8.759971e-50 | -8.615850e-47 |
Msa0304510 | Msa1409240 | 0.810263 | 1.257069e-50 | -8.615850e-47 |
Msa0304510 | Msa1418240 | 0.810005 | 1.428900e-50 | -8.615850e-47 |
Msa0304510 | Msa1419370 | 0.801108 | 1.051998e-48 | -8.615850e-47 |
Msa0304510 | Msa1422580 | 0.806282 | 8.871449e-50 | -8.615850e-47 |
Msa0304510 | Msa1423350 | 0.819317 | 1.237716e-52 | -8.615850e-47 |
Msa0304510 | Msa1433390 | 0.808858 | 2.519106e-50 | -8.615850e-47 |
Msa0304510 | Msa1434140 | 0.806105 | 9.666223e-50 | -8.615850e-47 |
Msa0304510 | Msa1439610 | 0.800364 | 1.492066e-48 | -8.615850e-47 |
Msa0304510 | Msa1446810 | 0.816709 | 4.808988e-52 | -8.615850e-47 |
Msa0304510 | Msa1451160 | 0.825873 | 3.697463e-54 | -8.615850e-47 |
Msa0304510 | Msa1458770 | 0.803665 | 3.127650e-49 | -8.615850e-47 |
Msa0304510 | Msa1460320 | -0.814393 | 1.576126e-51 | -8.615850e-47 |
Msa0304510 | Msa1464810 | 0.805387 | 1.368252e-49 | -8.615850e-47 |
Msa0304510 | Msa1466540 | 0.811259 | 7.656674e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0304510 | MtrunA17_Chr2g0332921 | 100.000 | 180 | 0 | 0 | 1 | 180 | 1 | 180 | 4.04e-130 | 362 |
Msa0304510 | MtrunA17_Chr2g0307071 | 77.778 | 180 | 40 | 0 | 1 | 180 | 1 | 180 | 7.63e-94 | 270 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0304510 | AT1G52600.1 | 91.667 | 180 | 15 | 0 | 1 | 180 | 1 | 180 | 4.70e-121 | 339 |
Msa0304510 | AT3G15710.1 | 85.556 | 180 | 26 | 0 | 1 | 180 | 1 | 180 | 2.16e-110 | 312 |
Find 59 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGTTGTCGTTGTTCTTTC+TGG | -0.006320 | 2_3:-61849322 | Msa0304510:CDS |
TCTTAATATTATGCTGTTAA+TGG | 0.152002 | 2_3:+61847179 | None:intergenic |
TATATTCTCATTGGTGCTTT+GGG | 0.216256 | 2_3:-61847322 | Msa0304510:CDS |
GCTGCAAAGGCACCACATTA+TGG | 0.262708 | 2_3:-61847966 | Msa0304510:CDS |
CGTTGTTCTTTCTGGAAGTA+TGG | 0.268459 | 2_3:-61849314 | Msa0304510:CDS |
TTACGTCTGCACTGATAATA+TGG | 0.295460 | 2_3:-61849378 | Msa0304510:CDS |
GTATATTCTCATTGGTGCTT+TGG | 0.303583 | 2_3:-61847323 | Msa0304510:CDS |
CACTCACTCACTCAAGAAAT+TGG | 0.305413 | 2_3:-61850298 | Msa0304510:five_prime_UTR |
GATCGTGCATCGTGTAATTA+AGG | 0.306443 | 2_3:-61848884 | Msa0304510:intron |
GGTTCCTACCTTATGTTGGC+TGG | 0.311493 | 2_3:-61847631 | Msa0304510:CDS |
GTTTCTCTATTTGTATTTGT+TGG | 0.349188 | 2_3:-61850342 | Msa0304510:five_prime_UTR |
TTGGCAGGAGATAACAACTA+TGG | 0.367451 | 2_3:-61848025 | Msa0304510:intron |
ACAATCTCTCCTGCGCGAAT+TGG | 0.370765 | 2_3:+61849090 | None:intergenic |
CTGCAAAGGCACCACATTAT+GGG | 0.401647 | 2_3:-61847965 | Msa0304510:CDS |
ACGGATCTGAAGAGATTTGA+TGG | 0.414274 | 2_3:+61850202 | None:intergenic |
ATGGCCAGCTTTGGCTGCAA+AGG | 0.415700 | 2_3:-61847979 | Msa0304510:CDS |
TCTTTCTGGAAGTATGGAAC+CGG | 0.425999 | 2_3:-61849308 | Msa0304510:CDS |
TGTATGCTCATGGCCAGCTT+TGG | 0.429153 | 2_3:-61847988 | Msa0304510:CDS |
GAAGAATCTCAATCAAATTA+CGG | 0.442574 | 2_3:-61847269 | Msa0304510:three_prime_UTR |
CCAGAAAGAACAACGACAAC+AGG | 0.443989 | 2_3:+61849322 | None:intergenic |
CTTGTTCTTACACATGAGTA+AGG | 0.448520 | 2_3:-61849115 | Msa0304510:CDS |
CTCACTCAGGCTGTTAGCCT+TGG | 0.449557 | 2_3:-61850173 | Msa0304510:intron |
TATGCTGTTAATGGTACAAA+AGG | 0.452611 | 2_3:+61847188 | None:intergenic |
AGCAAACAAACCTTGATGAT+AGG | 0.465854 | 2_3:+61847584 | None:intergenic |
GGTGCCTTTGCAGCCAAAGC+TGG | 0.467005 | 2_3:+61847975 | None:intergenic |
CACATTATGGGTAGAGCTGT+TGG | 0.467483 | 2_3:-61847953 | Msa0304510:CDS |
GTTCCTACCTTATGTTGGCT+GGG | 0.472418 | 2_3:-61847630 | Msa0304510:CDS |
TTGCTTACACGTTTGAAGCC+CGG | 0.485448 | 2_3:+61849289 | None:intergenic |
GGCAGGTTCCTACCTTATGT+TGG | 0.490903 | 2_3:-61847635 | Msa0304510:intron |
GTACATGAAAGAGGAGATAC+CGG | 0.495722 | 2_3:-61848241 | Msa0304510:CDS |
ATTGTCACCCAGCCAACATA+AGG | 0.495952 | 2_3:+61847623 | None:intergenic |
TGGCAGGAGATAACAACTAT+GGG | 0.501904 | 2_3:-61848024 | Msa0304510:intron |
AGAAACGCAATGGGTTTCGT+TGG | 0.517115 | 2_3:-61850239 | Msa0304510:exon |
TTTGCTCATAGTACTATTCG+AGG | 0.518018 | 2_3:+61847241 | None:intergenic |
ATTCAAGAAAGAAACGCAAT+GGG | 0.520667 | 2_3:-61850248 | Msa0304510:exon |
ACATTATGGGTAGAGCTGTT+GGG | 0.526062 | 2_3:-61847952 | Msa0304510:intron |
ATATTCTCATTGGTGCTTTG+GGG | 0.529101 | 2_3:-61847321 | Msa0304510:CDS |
TTAATTACACGATGCACGAT+CGG | 0.532530 | 2_3:+61848886 | None:intergenic |
CTTTCTGGAAGTATGGAACC+GGG | 0.532635 | 2_3:-61849307 | Msa0304510:CDS |
AAGGCATTGATGTGCATCAC+TGG | 0.537420 | 2_3:-61849355 | Msa0304510:CDS |
CATTCAAGAAAGAAACGCAA+TGG | 0.543308 | 2_3:-61850249 | Msa0304510:exon |
GAGGTTGATGTTCTCACAAA+AGG | 0.544332 | 2_3:-61848217 | Msa0304510:intron |
TGATAACTTCAAAAGAGTAA+AGG | 0.546067 | 2_3:-61847291 | Msa0304510:exon |
CAAATCTCTTCAGATCCGTC+AGG | 0.547809 | 2_3:-61850198 | Msa0304510:CDS |
ATAACAACTATGGGGATGAC+AGG | 0.548283 | 2_3:-61848015 | Msa0304510:CDS |
GATCCGTCAGGTCCTCACTC+AGG | 0.557343 | 2_3:-61850186 | Msa0304510:CDS |
CCAAACAAAACAAGAGAAAG+CGG | 0.561025 | 2_3:+61850372 | None:intergenic |
TGTGAGAACATCAACCTCCC+CGG | 0.595167 | 2_3:+61848222 | None:intergenic |
TACATGAAAGAGGAGATACC+GGG | 0.600542 | 2_3:-61848240 | Msa0304510:CDS |
GACAGGCTACTGTATGCTCA+TGG | 0.602506 | 2_3:-61847998 | Msa0304510:CDS |
GTCTGCACTGATAATATGGA+AGG | 0.605731 | 2_3:-61849374 | Msa0304510:CDS |
CAGCCTGAGTGAGGACCTGA+CGG | 0.616226 | 2_3:+61850183 | None:intergenic |
AGTAAGGATCCAATTCGCGC+AGG | 0.635833 | 2_3:-61849099 | Msa0304510:CDS |
TCACCCAGCCAACATAAGGT+AGG | 0.651154 | 2_3:+61847627 | None:intergenic |
CAACAGCTCTACCCATAATG+TGG | 0.657840 | 2_3:+61847954 | None:intergenic |
CAAGGCTAACAGCCTGAGTG+AGG | 0.659133 | 2_3:+61850174 | None:intergenic |
GGCAGGAGATAACAACTATG+GGG | 0.694070 | 2_3:-61848023 | Msa0304510:intron |
ACATGAAAGAGGAGATACCG+GGG | 0.758036 | 2_3:-61848239 | Msa0304510:CDS |
TGAAAGAGGAGATACCGGGG+AGG | 0.784707 | 2_3:-61848236 | Msa0304510:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAAAATAAATATATA+AGG | - | chr2_3:61849030-61849049 | Msa0304510:intron | 0.0% |
!! | TCAAAAAATGAATTATTATA+TGG | - | chr2_3:61847598-61847617 | Msa0304510:CDS | 10.0% |
!! | CAAAAAATGAATTATTATAT+GGG | - | chr2_3:61847599-61847618 | Msa0304510:CDS | 10.0% |
!! | AAAAAATGAATTATTATATG+GGG | - | chr2_3:61847600-61847619 | Msa0304510:CDS | 10.0% |
!!! | TTAACTTTATTTTATCTTTT+TGG | - | chr2_3:61847959-61847978 | Msa0304510:CDS | 10.0% |
!!! | TTTTTTTGTTGAATTGAATT+GGG | + | chr2_3:61847407-61847426 | None:intergenic | 15.0% |
!!! | TTTTTTTTGTTGAATTGAAT+TGG | + | chr2_3:61847408-61847427 | None:intergenic | 15.0% |
!! | TACATTATAGAATTTCTATT+TGG | - | chr2_3:61847437-61847456 | Msa0304510:intron | 15.0% |
!!! | GTATCATTTTTTTCAATTTT+TGG | - | chr2_3:61847622-61847641 | Msa0304510:CDS | 15.0% |
!! | TAAAGGAAAAAAAAAAACAA+GGG | + | chr2_3:61848620-61848639 | None:intergenic | 15.0% |
!!! | TTGTTTTTTTTTTTCCTTTA+GGG | - | chr2_3:61848620-61848639 | Msa0304510:intron | 15.0% |
!! | AGAAAAAGGAAATATAATAT+TGG | + | chr2_3:61849426-61849445 | None:intergenic | 15.0% |
!! | TTTACATTTATGTATGTTTA+TGG | - | chr2_3:61850019-61850038 | Msa0304510:intron | 15.0% |
!!! | TTTTTTGTTGAATTGAATTG+GGG | + | chr2_3:61847406-61847425 | None:intergenic | 20.0% |
!! | TTGATTAAAATTGGAATTCT+TGG | + | chr2_3:61847560-61847579 | None:intergenic | 20.0% |
!!! | TTTTTTTCAATTTTTGGATG+TGG | - | chr2_3:61847628-61847647 | Msa0304510:CDS | 20.0% |
!!! | TTTTTTCAATTTTTGGATGT+GGG | - | chr2_3:61847629-61847648 | Msa0304510:CDS | 20.0% |
!!! | TCAATTTAGGTTATAATTCA+AGG | - | chr2_3:61847659-61847678 | Msa0304510:intron | 20.0% |
!! | TTTATGGGTTTATTGATAAA+TGG | - | chr2_3:61847697-61847716 | Msa0304510:intron | 20.0% |
!! | TAAATGGTTGTTTATCTTTA+AGG | - | chr2_3:61847713-61847732 | Msa0304510:intron | 20.0% |
!! | TATTAGATACAGAATTACTA+AGG | + | chr2_3:61848292-61848311 | None:intergenic | 20.0% |
!! | CTAAAGGAAAAAAAAAAACA+AGG | + | chr2_3:61848621-61848640 | None:intergenic | 20.0% |
!!! | CTTGTTTTTTTTTTTCCTTT+AGG | - | chr2_3:61848619-61848638 | Msa0304510:intron | 20.0% |
!! | TTAGTTGTCAATTTATATAG+TGG | - | chr2_3:61849449-61849468 | Msa0304510:intron | 20.0% |
!!! | TATCATGATTTTTAACCAAT+GGG | - | chr2_3:61850078-61850097 | Msa0304510:intron | 20.0% |
!!! | ATGCTTTTTTTTTAACTTGA+AGG | - | chr2_3:61850325-61850344 | Msa0304510:five_prime_UTR | 20.0% |
!! | TCTTAATATTATGCTGTTAA+TGG | + | chr2_3:61850363-61850382 | None:intergenic | 20.0% |
! | GTTTCTCTATTTGTATTTGT+TGG | - | chr2_3:61847197-61847216 | Msa0304510:three_prime_UTR | 25.0% |
!!! | TTTTTCAATTTTTGGATGTG+GGG | - | chr2_3:61847630-61847649 | Msa0304510:CDS | 25.0% |
!!! | TATCTTTAAGGATTTTGATG+AGG | - | chr2_3:61847725-61847744 | Msa0304510:intron | 25.0% |
!!! | ATCTTTAAGGATTTTGATGA+GGG | - | chr2_3:61847726-61847745 | Msa0304510:intron | 25.0% |
! | CTATGAATAAAACAATGATC+TGG | + | chr2_3:61848104-61848123 | None:intergenic | 25.0% |
! | TTTCTGTTGCTAATGAATAT+TGG | - | chr2_3:61848384-61848403 | Msa0304510:intron | 25.0% |
!!! | TAATGAATATTGGTTTTTGC+AGG | - | chr2_3:61848394-61848413 | Msa0304510:intron | 25.0% |
!!! | AATGAATATTGGTTTTTGCA+GGG | - | chr2_3:61848395-61848414 | Msa0304510:intron | 25.0% |
! | TTGAAGTAAGTAAAACATAC+AGG | + | chr2_3:61848516-61848535 | None:intergenic | 25.0% |
! | TCAAGTAGAATACAAAGAAT+CGG | + | chr2_3:61848563-61848582 | None:intergenic | 25.0% |
! | TATTAGGAAAAAGTTGTTCA+CGG | - | chr2_3:61848826-61848845 | Msa0304510:intron | 25.0% |
! | ATTTCATTTCTTGAATGTGT+AGG | - | chr2_3:61848867-61848886 | Msa0304510:intron | 25.0% |
! | TTTCATTTCTTGAATGTGTA+GGG | - | chr2_3:61848868-61848887 | Msa0304510:intron | 25.0% |
! | TATGTAGTTACAGTTTGAAT+AGG | + | chr2_3:61848897-61848916 | None:intergenic | 25.0% |
! | GATAAATAAGAACTAAAAGC+AGG | + | chr2_3:61849003-61849022 | None:intergenic | 25.0% |
! | ATCACTAATCTGAGAAATAA+TGG | - | chr2_3:61849183-61849202 | Msa0304510:intron | 25.0% |
!! | TAAATGCTTGATCATTTTGT+AGG | - | chr2_3:61849276-61849295 | Msa0304510:intron | 25.0% |
!! | TGATATTAAGGTATTATGCA+TGG | - | chr2_3:61849703-61849722 | Msa0304510:intron | 25.0% |
! | TAAATGATAACACAATAGGT+TGG | + | chr2_3:61849984-61850003 | None:intergenic | 25.0% |
!! | CATTGGTTAAAAATCATGAT+AGG | + | chr2_3:61850079-61850098 | None:intergenic | 25.0% |
!! | CTATCATGATTTTTAACCAA+TGG | - | chr2_3:61850077-61850096 | Msa0304510:intron | 25.0% |
! | CTTGTTGCAATTCAAATTAT+AGG | + | chr2_3:61850160-61850179 | None:intergenic | 25.0% |
! | TGATAACTTCAAAAGAGTAA+AGG | - | chr2_3:61850248-61850267 | Msa0304510:exon | 25.0% |
! | GAAGAATCTCAATCAAATTA+CGG | - | chr2_3:61850270-61850289 | Msa0304510:five_prime_UTR | 25.0% |
!!! | TCTTGTTTTGTTTGGTCTTT+GGG | - | chr2_3:61847175-61847194 | Msa0304510:three_prime_UTR | 30.0% |
ATTCAAGAAAGAAACGCAAT+GGG | - | chr2_3:61847291-61847310 | Msa0304510:exon | 30.0% | |
! | TTTTTCGTGTTGTGGTTTAT+GGG | - | chr2_3:61847682-61847701 | Msa0304510:intron | 30.0% |
!! | TCTTTAAGGATTTTGATGAG+GGG | - | chr2_3:61847727-61847746 | Msa0304510:intron | 30.0% |
TGTGAGGAATTCTAATGTTA+AGG | - | chr2_3:61847755-61847774 | Msa0304510:intron | 30.0% | |
GTGAGGAATTCTAATGTTAA+GGG | - | chr2_3:61847756-61847775 | Msa0304510:intron | 30.0% | |
AACAAACTGTTAATCCAAAC+AGG | - | chr2_3:61848042-61848061 | Msa0304510:intron | 30.0% | |
ACAAACTGTTAATCCAAACA+GGG | - | chr2_3:61848043-61848062 | Msa0304510:intron | 30.0% | |
GGTGTTCATATAATCTACAT+AGG | + | chr2_3:61848069-61848088 | None:intergenic | 30.0% | |
!!! | ATGAATATTGGTTTTTGCAG+GGG | - | chr2_3:61848396-61848415 | Msa0304510:intron | 30.0% |
! | TTAAGGTAAGCTCAGTATTT+TGG | - | chr2_3:61848672-61848691 | Msa0304510:intron | 30.0% |
TGGATAAGATTGATATTACC+TGG | - | chr2_3:61849203-61849222 | Msa0304510:intron | 30.0% | |
! | ATTTTGTAGGTACATGAAAG+AGG | - | chr2_3:61849289-61849308 | Msa0304510:intron | 30.0% |
TCAAATTCACTACTGAGATT+GGG | + | chr2_3:61849402-61849421 | None:intergenic | 30.0% | |
ATCAAATTCACTACTGAGAT+TGG | + | chr2_3:61849403-61849422 | None:intergenic | 30.0% | |
TTGACAACTAAACGAGAAAA+AGG | + | chr2_3:61849440-61849459 | None:intergenic | 30.0% | |
AAACAGCAAAATACAAGAGA+CGG | + | chr2_3:61849494-61849513 | None:intergenic | 30.0% | |
!!! | CTCTTGTATTTTGCTGTTTT+TGG | - | chr2_3:61849495-61849514 | Msa0304510:intron | 30.0% |
GAATGAGATCTGTGATATTA+AGG | - | chr2_3:61849691-61849710 | Msa0304510:intron | 30.0% | |
GATAAATTAGGATAAACCCT+TGG | + | chr2_3:61849788-61849807 | None:intergenic | 30.0% | |
GAATTAGGGTAGGATAAATT+AGG | + | chr2_3:61849800-61849819 | None:intergenic | 30.0% | |
AATGCAAACTGTAGGAATTA+GGG | + | chr2_3:61849814-61849833 | None:intergenic | 30.0% | |
! | CAAAACATGCTTTGTTCTAT+AGG | + | chr2_3:61849837-61849856 | None:intergenic | 30.0% |
ACATTGCTTGTATTTGTCAA+TGG | - | chr2_3:61849883-61849902 | Msa0304510:intron | 30.0% | |
CAGCTAAATGATAACACAAT+AGG | + | chr2_3:61849988-61850007 | None:intergenic | 30.0% | |
TGTTATCATTTAGCTGAAGT+TGG | - | chr2_3:61849992-61850011 | Msa0304510:intron | 30.0% | |
! | GTTTTGCAGTATATTCTCAT+TGG | - | chr2_3:61850208-61850227 | Msa0304510:CDS | 30.0% |
! | TATATTCTCATTGGTGCTTT+GGG | - | chr2_3:61850217-61850236 | Msa0304510:CDS | 30.0% |
TATGCTGTTAATGGTACAAA+AGG | + | chr2_3:61850354-61850373 | None:intergenic | 30.0% | |
CCAAACAAAACAAGAGAAAG+CGG | + | chr2_3:61847170-61847189 | None:intergenic | 35.0% | |
!!! | CTCTTGTTTTGTTTGGTCTT+TGG | - | chr2_3:61847174-61847193 | Msa0304510:three_prime_UTR | 35.0% |
CATTCAAGAAAGAAACGCAA+TGG | - | chr2_3:61847290-61847309 | Msa0304510:exon | 35.0% | |
ATTTGGTACCTACATTGATC+TGG | - | chr2_3:61847454-61847473 | Msa0304510:intron | 35.0% | |
TTTGGTACCTACATTGATCT+GGG | - | chr2_3:61847455-61847474 | Msa0304510:intron | 35.0% | |
TGTGGGGTTATCATCAATTT+AGG | - | chr2_3:61847646-61847665 | Msa0304510:intron | 35.0% | |
! | ATTCAAGGTTTTTCGTGTTG+TGG | - | chr2_3:61847674-61847693 | Msa0304510:intron | 35.0% |
! | GTTTTTCGTGTTGTGGTTTA+TGG | - | chr2_3:61847681-61847700 | Msa0304510:intron | 35.0% |
!! | CTTTAAGGATTTTGATGAGG+GGG | - | chr2_3:61847728-61847747 | Msa0304510:intron | 35.0% |
! | TCTAATGTTAAGGGCATGTT+TGG | - | chr2_3:61847765-61847784 | Msa0304510:intron | 35.0% |
GTCTCACAGACTTATATGAT+TGG | + | chr2_3:61847811-61847830 | None:intergenic | 35.0% | |
TATAAGTCTGTGAGACTGTT+TGG | - | chr2_3:61847815-61847834 | Msa0304510:intron | 35.0% | |
ATGATCTGGAAGCAATTCTA+TGG | + | chr2_3:61848090-61848109 | None:intergenic | 35.0% | |
! | TTACGTCTGCACTGATAATA+TGG | - | chr2_3:61848161-61848180 | Msa0304510:intron | 35.0% |
!!! | TGAATATTGGTTTTTGCAGG+GGG | - | chr2_3:61848397-61848416 | Msa0304510:intron | 35.0% |
CTTGTTCTTACACATGAGTA+AGG | - | chr2_3:61848424-61848443 | Msa0304510:intron | 35.0% | |
ATACAGGATATACAACAGAG+AGG | + | chr2_3:61848500-61848519 | None:intergenic | 35.0% | |
TCCTTACTGACAAAATCTGT+TGG | - | chr2_3:61848588-61848607 | Msa0304510:intron | 35.0% | |
! | ACCAACAGATTTTGTCAGTA+AGG | + | chr2_3:61848592-61848611 | None:intergenic | 35.0% |
TTAATTACACGATGCACGAT+CGG | + | chr2_3:61848656-61848675 | None:intergenic | 35.0% | |
ATCCACACATAATTGTCTTC+TGG | - | chr2_3:61848797-61848816 | Msa0304510:intron | 35.0% | |
ATAGGACCCAGATACAAAAA+TGG | + | chr2_3:61848966-61848985 | None:intergenic | 35.0% | |
AAAAGTGAAGGAACATCCAA+TGG | + | chr2_3:61849078-61849097 | None:intergenic | 35.0% | |
! | AAGCATTTAGAGTCTCAAAC+AGG | + | chr2_3:61849265-61849284 | None:intergenic | 35.0% |
AACAGCAAAATACAAGAGAC+GGG | + | chr2_3:61849493-61849512 | None:intergenic | 35.0% | |
!!! | TGTATTTTGCTGTTTTTGGC+AGG | - | chr2_3:61849499-61849518 | Msa0304510:intron | 35.0% |
TCTCATAGACTCGTAACATA+AGG | - | chr2_3:61849623-61849642 | Msa0304510:intron | 35.0% | |
GACTCGTAACATAAGGATTA+AGG | - | chr2_3:61849630-61849649 | Msa0304510:intron | 35.0% | |
GTGTTAGATATTCCACAAGT+AGG | + | chr2_3:61849745-61849764 | None:intergenic | 35.0% | |
TTGAACCTTTGAACATACCA+AGG | - | chr2_3:61849768-61849787 | Msa0304510:intron | 35.0% | |
TGAACCTTTGAACATACCAA+GGG | - | chr2_3:61849769-61849788 | Msa0304510:intron | 35.0% | |
TAAACCCTTGGTATGTTCAA+AGG | + | chr2_3:61849776-61849795 | None:intergenic | 35.0% | |
GAATGCAAACTGTAGGAATT+AGG | + | chr2_3:61849815-61849834 | None:intergenic | 35.0% | |
TCTATAGGAATGCAAACTGT+AGG | + | chr2_3:61849822-61849841 | None:intergenic | 35.0% | |
GACTGAAAAACCTATCATCA+AGG | - | chr2_3:61849945-61849964 | Msa0304510:intron | 35.0% | |
! | AGCAAACAAACCTTGATGAT+AGG | + | chr2_3:61849958-61849977 | None:intergenic | 35.0% |
! | ATGATAACACAATAGGTTGG+CGG | + | chr2_3:61849981-61850000 | None:intergenic | 35.0% |
TATGGTGAAACCTATCATCA+AGG | - | chr2_3:61850037-61850056 | Msa0304510:intron | 35.0% | |
! | CATAAGCAAACCTTGATGAT+AGG | + | chr2_3:61850050-61850069 | None:intergenic | 35.0% |
! | CTATCATCAAGGTTTGCTTA+TGG | - | chr2_3:61850048-61850067 | Msa0304510:intron | 35.0% |
GATCTACTTGCTCTAATGTA+AGG | + | chr2_3:61850138-61850157 | None:intergenic | 35.0% | |
! | GTATATTCTCATTGGTGCTT+TGG | - | chr2_3:61850216-61850235 | Msa0304510:CDS | 35.0% |
! | ATATTCTCATTGGTGCTTTG+GGG | - | chr2_3:61850218-61850237 | Msa0304510:CDS | 35.0% |
TTTGCTCATAGTACTATTCG+AGG | + | chr2_3:61850301-61850320 | None:intergenic | 35.0% | |
!!! | CCGCTTTCTCTTGTTTTGTT+TGG | - | chr2_3:61847167-61847186 | Msa0304510:three_prime_UTR | 40.0% |
CACTCACTCACTCAAGAAAT+TGG | - | chr2_3:61847241-61847260 | Msa0304510:three_prime_UTR | 40.0% | |
ACGGATCTGAAGAGATTTGA+TGG | + | chr2_3:61847340-61847359 | None:intergenic | 40.0% | |
! | TGTTAAGGGCATGTTTGGAT+TGG | - | chr2_3:61847770-61847789 | Msa0304510:intron | 40.0% |
TAATCTACATAGGCCCTGTT+TGG | + | chr2_3:61848059-61848078 | None:intergenic | 40.0% | |
! | TTTTCCTTGTGTTCTGCTTC+AGG | - | chr2_3:61848130-61848149 | Msa0304510:intron | 40.0% |
! | GTCTGCACTGATAATATGGA+AGG | - | chr2_3:61848165-61848184 | Msa0304510:intron | 40.0% |
! | CGTTGTTCTTTCTGGAAGTA+TGG | - | chr2_3:61848225-61848244 | Msa0304510:CDS | 40.0% |
! | TCTTTCTGGAAGTATGGAAC+CGG | - | chr2_3:61848231-61848250 | Msa0304510:CDS | 40.0% |
GATCGTGCATCGTGTAATTA+AGG | - | chr2_3:61848655-61848674 | Msa0304510:intron | 40.0% | |
! | TGCTGAATGTGACTTTGAGA+CGG | - | chr2_3:61848730-61848749 | Msa0304510:intron | 40.0% |
AGCCAGAAGACAATTATGTG+TGG | + | chr2_3:61848802-61848821 | None:intergenic | 40.0% | |
ACACATAATTGTCTTCTGGC+TGG | - | chr2_3:61848801-61848820 | Msa0304510:intron | 40.0% | |
! | TGTCTTCTGGCTGGAATATT+AGG | - | chr2_3:61848810-61848829 | Msa0304510:intron | 40.0% |
TGAGCTTACCAACCTTGATT+TGG | - | chr2_3:61848932-61848951 | Msa0304510:intron | 40.0% | |
GAGCTTACCAACCTTGATTT+GGG | - | chr2_3:61848933-61848952 | Msa0304510:intron | 40.0% | |
!! | TGTGGGTCCATTTTTGTATC+TGG | - | chr2_3:61848956-61848975 | Msa0304510:intron | 40.0% |
!! | GTGGGTCCATTTTTGTATCT+GGG | - | chr2_3:61848957-61848976 | Msa0304510:intron | 40.0% |
CAGGTAGTGACTATGTTGAT+AGG | + | chr2_3:61848984-61849003 | None:intergenic | 40.0% | |
ACATTGTGAACTGATGCCAT+TGG | - | chr2_3:61849059-61849078 | Msa0304510:intron | 40.0% | |
!!! | TCCTTCACTTTTTGAACCTC+TGG | - | chr2_3:61849086-61849105 | Msa0304510:CDS | 40.0% |
ACCAGAGGTTCAAAAAGTGA+AGG | + | chr2_3:61849090-61849109 | None:intergenic | 40.0% | |
CATTTGCAAGTGACAACTTG+TGG | - | chr2_3:61849141-61849160 | Msa0304510:intron | 40.0% | |
AAGTGACAACTTGTGGAAAC+TGG | - | chr2_3:61849148-61849167 | Msa0304510:intron | 40.0% | |
GTACATGAAAGAGGAGATAC+CGG | - | chr2_3:61849298-61849317 | Msa0304510:CDS | 40.0% | |
TACATGAAAGAGGAGATACC+GGG | - | chr2_3:61849299-61849318 | Msa0304510:CDS | 40.0% | |
!! | GAGGTTGATGTTCTCACAAA+AGG | - | chr2_3:61849322-61849341 | Msa0304510:CDS | 40.0% |
TTGGCAGGAGATAACAACTA+TGG | - | chr2_3:61849514-61849533 | Msa0304510:intron | 40.0% | |
TGGCAGGAGATAACAACTAT+GGG | - | chr2_3:61849515-61849534 | Msa0304510:intron | 40.0% | |
ATAACAACTATGGGGATGAC+AGG | - | chr2_3:61849524-61849543 | Msa0304510:intron | 40.0% | |
ACATTATGGGTAGAGCTGTT+GGG | - | chr2_3:61849587-61849606 | Msa0304510:intron | 40.0% | |
TGCTTGAAGATACCTACTTG+TGG | - | chr2_3:61849730-61849749 | Msa0304510:intron | 40.0% | |
CAAACTGTAGGAATTAGGGT+AGG | + | chr2_3:61849810-61849829 | None:intergenic | 40.0% | |
TGCTTGTATTTGTCAATGGC+AGG | - | chr2_3:61849887-61849906 | Msa0304510:intron | 40.0% | |
AGTGGAAAATCATAGCCCAT+TGG | + | chr2_3:61850096-61850115 | None:intergenic | 40.0% | |
!! | GTTGACTTGAGAGAGAAAAG+TGG | + | chr2_3:61850114-61850133 | None:intergenic | 40.0% |
! | AGAAACGCAATGGGTTTCGT+TGG | - | chr2_3:61847300-61847319 | Msa0304510:CDS | 45.0% |
CAAATCTCTTCAGATCCGTC+AGG | - | chr2_3:61847341-61847360 | Msa0304510:intron | 45.0% | |
GGGAAAGAGAAAACTGACCA+AGG | + | chr2_3:61847386-61847405 | None:intergenic | 45.0% | |
AAGTCGACCCAGATCAATGT+AGG | + | chr2_3:61847465-61847484 | None:intergenic | 45.0% | |
!! | AAGGCATTGATGTGCATCAC+TGG | - | chr2_3:61848184-61848203 | Msa0304510:intron | 45.0% |
CCAGAAAGAACAACGACAAC+AGG | + | chr2_3:61848220-61848239 | None:intergenic | 45.0% | |
CCTGTTGTCGTTGTTCTTTC+TGG | - | chr2_3:61848217-61848236 | Msa0304510:intron | 45.0% | |
! | CTTTCTGGAAGTATGGAACC+GGG | - | chr2_3:61848232-61848251 | Msa0304510:CDS | 45.0% |
! | TTGCTTACACGTTTGAAGCC+CGG | + | chr2_3:61848253-61848272 | None:intergenic | 45.0% |
ACCTTCTCATGTTAGAGCCT+TGG | - | chr2_3:61848763-61848782 | Msa0304510:intron | 45.0% | |
! | TCCAAGGCTCTAACATGAGA+AGG | + | chr2_3:61848767-61848786 | None:intergenic | 45.0% |
GTGGATCATCTCATGATCCA+AGG | + | chr2_3:61848783-61848802 | None:intergenic | 45.0% | |
GAAAAAGTTGTTCACGGTGC+TGG | - | chr2_3:61848832-61848851 | Msa0304510:intron | 45.0% | |
!! | TACCAACCTTGATTTGGGTG+TGG | - | chr2_3:61848938-61848957 | Msa0304510:intron | 45.0% |
!! | ACCAACCTTGATTTGGGTGT+GGG | - | chr2_3:61848939-61848958 | Msa0304510:intron | 45.0% |
AGTAGTTCAAACAGCACCAG+AGG | + | chr2_3:61849105-61849124 | None:intergenic | 45.0% | |
CAACGCATGAAGATCAATCC+AGG | + | chr2_3:61849224-61849243 | None:intergenic | 45.0% | |
ACATGAAAGAGGAGATACCG+GGG | - | chr2_3:61849300-61849319 | Msa0304510:CDS | 45.0% | |
GGCAGGAGATAACAACTATG+GGG | - | chr2_3:61849516-61849535 | Msa0304510:intron | 45.0% | |
!! | CTGCAAAGGCACCACATTAT+GGG | - | chr2_3:61849574-61849593 | Msa0304510:intron | 45.0% |
CAACAGCTCTACCCATAATG+TGG | + | chr2_3:61849588-61849607 | None:intergenic | 45.0% | |
CACATTATGGGTAGAGCTGT+TGG | - | chr2_3:61849586-61849605 | Msa0304510:intron | 45.0% | |
! | GTTCCTACCTTATGTTGGCT+GGG | - | chr2_3:61849909-61849928 | Msa0304510:intron | 45.0% |
ATTGTCACCCAGCCAACATA+AGG | + | chr2_3:61849919-61849938 | None:intergenic | 45.0% | |
!!! | TTTTTTATTTTTGTATTTTT+AGG | - | chr2_3:61847527-61847546 | Msa0304510:intron | 5.0% |
!!! | TTTTTATTTTTGTATTTTTA+GGG | - | chr2_3:61847528-61847547 | Msa0304510:intron | 5.0% |
!! | ATATAATAATTGATTAAAAT+TGG | + | chr2_3:61847569-61847588 | None:intergenic | 5.0% |
!!! | AATTTTAATCAATTATTATA+TGG | - | chr2_3:61847568-61847587 | Msa0304510:intron | 5.0% |
!!! | ATTTTAATCAATTATTATAT+GGG | - | chr2_3:61847569-61847588 | Msa0304510:intron | 5.0% |
TTGATGAGGGGGAGATTGTG+AGG | - | chr2_3:61847739-61847758 | Msa0304510:intron | 50.0% | |
CATGCCTGAAGCAGAACACA+AGG | + | chr2_3:61848137-61848156 | None:intergenic | 50.0% | |
AGTAAGGATCCAATTCGCGC+AGG | - | chr2_3:61848440-61848459 | Msa0304510:intron | 50.0% | |
ACAATCTCTCCTGCGCGAAT+TGG | + | chr2_3:61848452-61848471 | None:intergenic | 50.0% | |
TCGGAATCTCTCGTCCCTAA+AGG | + | chr2_3:61848637-61848656 | None:intergenic | 50.0% | |
! | AAGTTGTTCACGGTGCTGGA+TGG | - | chr2_3:61848836-61848855 | Msa0304510:intron | 50.0% |
ACCCACACCCAAATCAAGGT+TGG | + | chr2_3:61848943-61848962 | None:intergenic | 50.0% | |
ATGGACCCACACCCAAATCA+AGG | + | chr2_3:61848947-61848966 | None:intergenic | 50.0% | |
TGTGAGAACATCAACCTCCC+CGG | + | chr2_3:61849320-61849339 | None:intergenic | 50.0% | |
GACAGGCTACTGTATGCTCA+TGG | - | chr2_3:61849541-61849560 | Msa0304510:intron | 50.0% | |
TGTATGCTCATGGCCAGCTT+TGG | - | chr2_3:61849551-61849570 | Msa0304510:intron | 50.0% | |
!! | GCTGCAAAGGCACCACATTA+TGG | - | chr2_3:61849573-61849592 | Msa0304510:intron | 50.0% |
GGCAGGTTCCTACCTTATGT+TGG | - | chr2_3:61849904-61849923 | Msa0304510:intron | 50.0% | |
GGTTCCTACCTTATGTTGGC+TGG | - | chr2_3:61849908-61849927 | Msa0304510:intron | 50.0% | |
TCACCCAGCCAACATAAGGT+AGG | + | chr2_3:61849915-61849934 | None:intergenic | 50.0% | |
CAAGGCTAACAGCCTGAGTG+AGG | + | chr2_3:61847368-61847387 | None:intergenic | 55.0% | |
! | CTCACTCAGGCTGTTAGCCT+TGG | - | chr2_3:61847366-61847385 | Msa0304510:intron | 55.0% |
! | TTGTTCACGGTGCTGGATGG+AGG | - | chr2_3:61848839-61848858 | Msa0304510:intron | 55.0% |
! | TGTTCACGGTGCTGGATGGA+GGG | - | chr2_3:61848840-61848859 | Msa0304510:intron | 55.0% |
TGAAAGAGGAGATACCGGGG+AGG | - | chr2_3:61849303-61849322 | Msa0304510:CDS | 55.0% | |
! | ATGGCCAGCTTTGGCTGCAA+AGG | - | chr2_3:61849560-61849579 | Msa0304510:intron | 55.0% |
GATCCGTCAGGTCCTCACTC+AGG | - | chr2_3:61847353-61847372 | Msa0304510:intron | 60.0% | |
CAGCCTGAGTGAGGACCTGA+CGG | + | chr2_3:61847359-61847378 | None:intergenic | 60.0% | |
GGTGCCTTTGCAGCCAAAGC+TGG | + | chr2_3:61849567-61849586 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 61847159 | 61850402 | 61847159 | ID=Msa0304510;Name=Msa0304510 |
chr2_3 | mRNA | 61847159 | 61850402 | 61847159 | ID=Msa0304510-mRNA-1;Parent=Msa0304510;Name=Msa0304510-mRNA-1;_AED=0.11;_eAED=0.11;_QI=150|1|1|1|1|1|8|135|180 |
chr2_3 | exon | 61847159 | 61847344 | 61847159 | ID=Msa0304510-mRNA-1:exon:20586;Parent=Msa0304510-mRNA-1 |
chr2_3 | exon | 61847595 | 61847652 | 61847595 | ID=Msa0304510-mRNA-1:exon:20585;Parent=Msa0304510-mRNA-1 |
chr2_3 | exon | 61847953 | 61848040 | 61847953 | ID=Msa0304510-mRNA-1:exon:20584;Parent=Msa0304510-mRNA-1 |
chr2_3 | exon | 61848218 | 61848263 | 61848218 | ID=Msa0304510-mRNA-1:exon:20583;Parent=Msa0304510-mRNA-1 |
chr2_3 | exon | 61848885 | 61848920 | 61848885 | ID=Msa0304510-mRNA-1:exon:20582;Parent=Msa0304510-mRNA-1 |
chr2_3 | exon | 61849074 | 61849145 | 61849074 | ID=Msa0304510-mRNA-1:exon:20581;Parent=Msa0304510-mRNA-1 |
chr2_3 | exon | 61849297 | 61849409 | 61849297 | ID=Msa0304510-mRNA-1:exon:20580;Parent=Msa0304510-mRNA-1 |
chr2_3 | exon | 61850174 | 61850402 | 61850174 | ID=Msa0304510-mRNA-1:exon:20579;Parent=Msa0304510-mRNA-1 |
chr2_3 | five_prime_UTR | 61850253 | 61850402 | 61850253 | ID=Msa0304510-mRNA-1:five_prime_utr;Parent=Msa0304510-mRNA-1 |
chr2_3 | CDS | 61850174 | 61850252 | 61850174 | ID=Msa0304510-mRNA-1:cds;Parent=Msa0304510-mRNA-1 |
chr2_3 | CDS | 61849297 | 61849409 | 61849297 | ID=Msa0304510-mRNA-1:cds;Parent=Msa0304510-mRNA-1 |
chr2_3 | CDS | 61849074 | 61849145 | 61849074 | ID=Msa0304510-mRNA-1:cds;Parent=Msa0304510-mRNA-1 |
chr2_3 | CDS | 61848885 | 61848920 | 61848885 | ID=Msa0304510-mRNA-1:cds;Parent=Msa0304510-mRNA-1 |
chr2_3 | CDS | 61848218 | 61848263 | 61848218 | ID=Msa0304510-mRNA-1:cds;Parent=Msa0304510-mRNA-1 |
chr2_3 | CDS | 61847953 | 61848040 | 61847953 | ID=Msa0304510-mRNA-1:cds;Parent=Msa0304510-mRNA-1 |
chr2_3 | CDS | 61847595 | 61847652 | 61847595 | ID=Msa0304510-mRNA-1:cds;Parent=Msa0304510-mRNA-1 |
chr2_3 | CDS | 61847294 | 61847344 | 61847294 | ID=Msa0304510-mRNA-1:cds;Parent=Msa0304510-mRNA-1 |
chr2_3 | three_prime_UTR | 61847159 | 61847293 | 61847159 | ID=Msa0304510-mRNA-1:three_prime_utr;Parent=Msa0304510-mRNA-1 |
Gene Sequence |
Protein sequence |