Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121590 | XP_013468153.1 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 2.51e-81 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121590 | sp|B0BLT0|ZN593_XENTR | 42.017 | 119 | 54 | 7 | 7 | 119 | 10 | 119 | 3.76e-18 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121590 | I3S1F8 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 1.20e-81 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0121590 | 0.800601 | 1.335130e-48 | -8.615850e-47 |
| Msa0011960 | Msa0121590 | 0.806749 | 7.073396e-50 | -8.615850e-47 |
| Msa0015300 | Msa0121590 | 0.802369 | 5.795932e-49 | -8.615850e-47 |
| Msa0018620 | Msa0121590 | 0.805138 | 1.543054e-49 | -8.615850e-47 |
| Msa0027260 | Msa0121590 | 0.818916 | 1.527273e-52 | -8.615850e-47 |
| Msa0029260 | Msa0121590 | 0.806803 | 6.888519e-50 | -8.615850e-47 |
| Msa0030380 | Msa0121590 | 0.803022 | 4.249975e-49 | -8.615850e-47 |
| Msa0032260 | Msa0121590 | 0.852240 | 5.255135e-61 | -8.615850e-47 |
| Msa0032580 | Msa0121590 | 0.820784 | 5.713301e-53 | -8.615850e-47 |
| Msa0033980 | Msa0121590 | 0.838165 | 3.380998e-57 | -8.615850e-47 |
| Msa0040690 | Msa0121590 | 0.802811 | 4.699141e-49 | -8.615850e-47 |
| Msa0042280 | Msa0121590 | 0.801812 | 7.547429e-49 | -8.615850e-47 |
| Msa0047160 | Msa0121590 | 0.815205 | 1.041560e-51 | -8.615850e-47 |
| Msa0047980 | Msa0121590 | 0.806129 | 9.555269e-50 | -8.615850e-47 |
| Msa0048180 | Msa0121590 | 0.800616 | 1.325460e-48 | -8.615850e-47 |
| Msa0054780 | Msa0121590 | 0.802855 | 4.601661e-49 | -8.615850e-47 |
| Msa0056030 | Msa0121590 | 0.813367 | 2.652565e-51 | -8.615850e-47 |
| Msa0073480 | Msa0121590 | 0.854188 | 1.453593e-61 | -8.615850e-47 |
| Msa0074320 | Msa0121590 | 0.825884 | 3.673455e-54 | -8.615850e-47 |
| Msa0076000 | Msa0121590 | 0.844934 | 5.557691e-59 | -8.615850e-47 |
| Msa0081930 | Msa0121590 | 0.829979 | 3.801114e-55 | -8.615850e-47 |
| Msa0082680 | Msa0121590 | -0.803549 | 3.305899e-49 | -8.615850e-47 |
| Msa0084940 | Msa0121590 | 0.813438 | 2.559944e-51 | -8.615850e-47 |
| Msa0091570 | Msa0121590 | 0.814372 | 1.593330e-51 | -8.615850e-47 |
| Msa0094470 | Msa0121590 | 0.822698 | 2.061425e-53 | -8.615850e-47 |
| Msa0094920 | Msa0121590 | 0.861363 | 1.081512e-63 | -8.615850e-47 |
| Msa0094950 | Msa0121590 | 0.829584 | 4.742878e-55 | -8.615850e-47 |
| Msa0100740 | Msa0121590 | 0.810108 | 1.357982e-50 | -8.615850e-47 |
| Msa0115270 | Msa0121590 | 0.803732 | 3.029322e-49 | -8.615850e-47 |
| Msa0115390 | Msa0121590 | 0.827246 | 1.739507e-54 | -8.615850e-47 |
| Msa0121590 | Msa0121620 | 0.819287 | 1.257118e-52 | -8.615850e-47 |
| Msa0121590 | Msa0121820 | 0.831182 | 1.929304e-55 | -8.615850e-47 |
| Msa0121590 | Msa0124340 | 0.805953 | 1.040649e-49 | -8.615850e-47 |
| Msa0121590 | Msa0127310 | 0.830526 | 2.794952e-55 | -8.615850e-47 |
| Msa0121590 | Msa0128020 | 0.803922 | 2.766147e-49 | -8.615850e-47 |
| Msa0121590 | Msa0128860 | 0.836003 | 1.206779e-56 | -8.615850e-47 |
| Msa0121590 | Msa0165950 | 0.821086 | 4.868446e-53 | -8.615850e-47 |
| Msa0121590 | Msa0166750 | 0.813771 | 2.162055e-51 | -8.615850e-47 |
| Msa0121590 | Msa0167480 | 0.822858 | 1.891222e-53 | -8.615850e-47 |
| Msa0121590 | Msa0169300 | 0.806048 | 9.938915e-50 | -8.615850e-47 |
| Msa0121590 | Msa0172970 | 0.821350 | 4.231425e-53 | -8.615850e-47 |
| Msa0121590 | Msa0173740 | 0.806842 | 6.757790e-50 | -8.615850e-47 |
| Msa0121590 | Msa0173820 | 0.804743 | 1.865787e-49 | -8.615850e-47 |
| Msa0121590 | Msa0174730 | 0.834820 | 2.402959e-56 | -8.615850e-47 |
| Msa0121590 | Msa0180020 | 0.810207 | 1.293083e-50 | -8.615850e-47 |
| Msa0121590 | Msa0183460 | 0.828756 | 7.532582e-55 | -8.615850e-47 |
| Msa0121590 | Msa0183900 | 0.804567 | 2.030263e-49 | -8.615850e-47 |
| Msa0121590 | Msa0186890 | 0.836686 | 8.091476e-57 | -8.615850e-47 |
| Msa0121590 | Msa0187690 | 0.814975 | 1.171306e-51 | -8.615850e-47 |
| Msa0121590 | Msa0187930 | 0.845654 | 3.549220e-59 | -8.615850e-47 |
| Msa0121590 | Msa0189300 | 0.801288 | 9.665690e-49 | -8.615850e-47 |
| Msa0121590 | Msa0194480 | 0.821674 | 3.560335e-53 | -8.615850e-47 |
| Msa0121590 | Msa0194540 | 0.859203 | 4.865099e-63 | -8.615850e-47 |
| Msa0121590 | Msa0199690 | 0.842949 | 1.891989e-58 | -8.615850e-47 |
| Msa0121590 | Msa0214710 | 0.846433 | 2.179451e-59 | -8.615850e-47 |
| Msa0121590 | Msa0220720 | 0.815441 | 9.229596e-52 | -8.615850e-47 |
| Msa0121590 | Msa0227400 | 0.830491 | 2.850961e-55 | -8.615850e-47 |
| Msa0121590 | Msa0231660 | 0.813330 | 2.703354e-51 | -8.615850e-47 |
| Msa0121590 | Msa0231880 | 0.808683 | 2.745035e-50 | -8.615850e-47 |
| Msa0121590 | Msa0236270 | 0.808546 | 2.936768e-50 | -8.615850e-47 |
| Msa0121590 | Msa0242230 | 0.846880 | 1.644878e-59 | -8.615850e-47 |
| Msa0121590 | Msa0242410 | 0.821158 | 4.684400e-53 | -8.615850e-47 |
| Msa0121590 | Msa0244780 | 0.840118 | 1.054292e-57 | -8.615850e-47 |
| Msa0121590 | Msa0260210 | 0.857518 | 1.545336e-62 | -8.615850e-47 |
| Msa0121590 | Msa0260240 | 0.836831 | 7.432683e-57 | -8.615850e-47 |
| Msa0121590 | Msa0260280 | 0.836036 | 1.183654e-56 | -8.615850e-47 |
| Msa0121590 | Msa0262310 | 0.829457 | 5.093687e-55 | -8.615850e-47 |
| Msa0121590 | Msa0267970 | 0.821054 | 4.951936e-53 | -8.615850e-47 |
| Msa0121590 | Msa0268130 | 0.851599 | 7.991785e-61 | -8.615850e-47 |
| Msa0121590 | Msa0280430 | 0.830146 | 3.460193e-55 | -8.615850e-47 |
| Msa0121590 | Msa0291520 | 0.804447 | 2.151363e-49 | -8.615850e-47 |
| Msa0121590 | Msa0298990 | 0.839744 | 1.319627e-57 | -8.615850e-47 |
| Msa0121590 | Msa0299870 | 0.802127 | 6.500116e-49 | -8.615850e-47 |
| Msa0121590 | Msa0300120 | 0.803607 | 3.215682e-49 | -8.615850e-47 |
| Msa0121590 | Msa0304260 | 0.825584 | 4.328915e-54 | -8.615850e-47 |
| Msa0121590 | Msa0304290 | 0.856443 | 3.205640e-62 | -8.615850e-47 |
| Msa0121590 | Msa0304300 | 0.807666 | 4.522136e-50 | -8.615850e-47 |
| Msa0121590 | Msa0304330 | 0.860938 | 1.456907e-63 | -8.615850e-47 |
| Msa0121590 | Msa0304590 | 0.829259 | 5.689085e-55 | -8.615850e-47 |
| Msa0121590 | Msa0304660 | 0.827687 | 1.363128e-54 | -8.615850e-47 |
| Msa0121590 | Msa0305890 | 0.849123 | 3.958378e-60 | -8.615850e-47 |
| Msa0121590 | Msa0306710 | 0.802031 | 6.803431e-49 | -8.615850e-47 |
| Msa0121590 | Msa0331700 | 0.827120 | 1.863937e-54 | -8.615850e-47 |
| Msa0121590 | Msa0337240 | 0.802815 | 4.690918e-49 | -8.615850e-47 |
| Msa0121590 | Msa0337650 | 0.812245 | 4.671877e-51 | -8.615850e-47 |
| Msa0121590 | Msa0340810 | 0.850764 | 1.375365e-60 | -8.615850e-47 |
| Msa0121590 | Msa0355270 | 0.821212 | 4.553578e-53 | -8.615850e-47 |
| Msa0121590 | Msa0366890 | 0.805913 | 1.061242e-49 | -8.615850e-47 |
| Msa0121590 | Msa0369050 | 0.820993 | 5.113237e-53 | -8.615850e-47 |
| Msa0121590 | Msa0376690 | 0.845021 | 5.265280e-59 | -8.615850e-47 |
| Msa0121590 | Msa0380040 | 0.807129 | 5.878376e-50 | -8.615850e-47 |
| Msa0121590 | Msa0385580 | 0.844543 | 7.081896e-59 | -8.615850e-47 |
| Msa0121590 | Msa0398950 | 0.818816 | 1.608751e-52 | -8.615850e-47 |
| Msa0121590 | Msa0402330 | 0.813553 | 2.415263e-51 | -8.615850e-47 |
| Msa0121590 | Msa0414800 | 0.807210 | 5.650060e-50 | -8.615850e-47 |
| Msa0121590 | Msa0416400 | 0.832547 | 8.882804e-56 | -8.615850e-47 |
| Msa0121590 | Msa0419520 | 0.839610 | 1.429378e-57 | -8.615850e-47 |
| Msa0121590 | Msa0429290 | 0.818569 | 1.830421e-52 | -8.615850e-47 |
| Msa0121590 | Msa0458060 | 0.838108 | 3.497063e-57 | -8.615850e-47 |
| Msa0121590 | Msa0465550 | 0.839861 | 1.229567e-57 | -8.615850e-47 |
| Msa0121590 | Msa0465790 | 0.812286 | 4.575414e-51 | -8.615850e-47 |
| Msa0121590 | Msa0471440 | 0.815523 | 8.850921e-52 | -8.615850e-47 |
| Msa0121590 | Msa0471590 | 0.846147 | 2.607074e-59 | -8.615850e-47 |
| Msa0121590 | Msa0475580 | 0.806738 | 7.111540e-50 | -8.615850e-47 |
| Msa0121590 | Msa0506400 | 0.803268 | 3.779731e-49 | -8.615850e-47 |
| Msa0121590 | Msa0508590 | 0.825538 | 4.438867e-54 | -8.615850e-47 |
| Msa0121590 | Msa0508630 | 0.824200 | 9.182766e-54 | -8.615850e-47 |
| Msa0121590 | Msa0509390 | 0.802743 | 4.854401e-49 | -8.615850e-47 |
| Msa0121590 | Msa0510350 | 0.809136 | 2.196880e-50 | -8.615850e-47 |
| Msa0121590 | Msa0511490 | 0.826960 | 2.036124e-54 | -8.615850e-47 |
| Msa0121590 | Msa0519220 | 0.810995 | 8.736360e-51 | -8.615850e-47 |
| Msa0121590 | Msa0526540 | 0.832348 | 9.950842e-56 | -8.615850e-47 |
| Msa0121590 | Msa0541360 | 0.806047 | 9.941400e-50 | -8.615850e-47 |
| Msa0121590 | Msa0541860 | 0.837609 | 4.699919e-57 | -8.615850e-47 |
| Msa0121590 | Msa0547360 | 0.823862 | 1.102203e-53 | -8.615850e-47 |
| Msa0121590 | Msa0552810 | 0.800090 | 1.696584e-48 | -8.615850e-47 |
| Msa0121590 | Msa0555450 | 0.810284 | 1.244558e-50 | -8.615850e-47 |
| Msa0121590 | Msa0562440 | 0.800881 | 1.170423e-48 | -8.615850e-47 |
| Msa0121590 | Msa0568820 | 0.802049 | 6.746706e-49 | -8.615850e-47 |
| Msa0121590 | Msa0571920 | 0.803989 | 2.679297e-49 | -8.615850e-47 |
| Msa0121590 | Msa0576940 | 0.825959 | 3.526336e-54 | -8.615850e-47 |
| Msa0121590 | Msa0581070 | 0.804842 | 1.778806e-49 | -8.615850e-47 |
| Msa0121590 | Msa0585900 | 0.800594 | 1.339248e-48 | -8.615850e-47 |
| Msa0121590 | Msa0589190 | 0.810531 | 1.100365e-50 | -8.615850e-47 |
| Msa0121590 | Msa0594910 | 0.822048 | 2.917986e-53 | -8.615850e-47 |
| Msa0121590 | Msa0603670 | 0.814821 | 1.267544e-51 | -8.615850e-47 |
| Msa0121590 | Msa0610390 | 0.821348 | 4.234671e-53 | -8.615850e-47 |
| Msa0121590 | Msa0615440 | 0.822109 | 2.824161e-53 | -8.615850e-47 |
| Msa0121590 | Msa0616020 | 0.801254 | 9.820317e-49 | -8.615850e-47 |
| Msa0121590 | Msa0619070 | 0.815808 | 7.648128e-52 | -8.615850e-47 |
| Msa0121590 | Msa0623700 | 0.832953 | 7.042070e-56 | -8.615850e-47 |
| Msa0121590 | Msa0631350 | 0.819457 | 1.149939e-52 | -8.615850e-47 |
| Msa0121590 | Msa0639310 | 0.817801 | 2.731357e-52 | -8.615850e-47 |
| Msa0121590 | Msa0643220 | 0.806018 | 1.008646e-49 | -8.615850e-47 |
| Msa0121590 | Msa0650920 | 0.826326 | 2.884922e-54 | -8.615850e-47 |
| Msa0121590 | Msa0654760 | -0.810939 | 8.983989e-51 | -8.615850e-47 |
| Msa0121590 | Msa0654870 | 0.808524 | 2.969601e-50 | -8.615850e-47 |
| Msa0121590 | Msa0669760 | 0.812317 | 4.505917e-51 | -8.615850e-47 |
| Msa0121590 | Msa0677770 | 0.818632 | 1.771438e-52 | -8.615850e-47 |
| Msa0121590 | Msa0680240 | 0.804897 | 1.732739e-49 | -8.615850e-47 |
| Msa0121590 | Msa0682780 | 0.827133 | 1.851421e-54 | -8.615850e-47 |
| Msa0121590 | Msa0682900 | 0.812271 | 4.611027e-51 | -8.615850e-47 |
| Msa0121590 | Msa0687630 | 0.837026 | 6.624301e-57 | -8.615850e-47 |
| Msa0121590 | Msa0691900 | 0.845728 | 3.388248e-59 | -8.615850e-47 |
| Msa0121590 | Msa0692940 | 0.819319 | 1.236116e-52 | -8.615850e-47 |
| Msa0121590 | Msa0694840 | 0.801626 | 8.239882e-49 | -8.615850e-47 |
| Msa0121590 | Msa0696450 | 0.801923 | 7.159507e-49 | -8.615850e-47 |
| Msa0121590 | Msa0698030 | 0.800812 | 1.208858e-48 | -8.615850e-47 |
| Msa0121590 | Msa0698490 | 0.824879 | 6.353414e-54 | -8.615850e-47 |
| Msa0121590 | Msa0698660 | 0.828613 | 8.156506e-55 | -8.615850e-47 |
| Msa0121590 | Msa0703230 | 0.837075 | 6.437027e-57 | -8.615850e-47 |
| Msa0121590 | Msa0705600 | 0.808740 | 2.669024e-50 | -8.615850e-47 |
| Msa0121590 | Msa0709500 | 0.816610 | 5.059570e-52 | -8.615850e-47 |
| Msa0121590 | Msa0711490 | 0.800019 | 1.753475e-48 | -8.615850e-47 |
| Msa0121590 | Msa0711780 | 0.804596 | 2.001971e-49 | -8.615850e-47 |
| Msa0121590 | Msa0719420 | 0.809669 | 1.687828e-50 | -8.615850e-47 |
| Msa0121590 | Msa0750430 | 0.817322 | 3.501667e-52 | -8.615850e-47 |
| Msa0121590 | Msa0750920 | 0.806146 | 9.476843e-50 | -8.615850e-47 |
| Msa0121590 | Msa0770200 | 0.832611 | 8.565192e-56 | -8.615850e-47 |
| Msa0121590 | Msa0772480 | 0.812774 | 3.578833e-51 | -8.615850e-47 |
| Msa0121590 | Msa0780880 | 0.803879 | 2.823096e-49 | -8.615850e-47 |
| Msa0121590 | Msa0789680 | 0.811370 | 7.242866e-51 | -8.615850e-47 |
| Msa0121590 | Msa0790850 | 0.817394 | 3.372923e-52 | -8.615850e-47 |
| Msa0121590 | Msa0793390 | 0.804893 | 1.735584e-49 | -8.615850e-47 |
| Msa0121590 | Msa0794670 | 0.819901 | 9.105993e-53 | -8.615850e-47 |
| Msa0121590 | Msa0798440 | 0.826051 | 3.353830e-54 | -8.615850e-47 |
| Msa0121590 | Msa0802410 | 0.811373 | 7.232785e-51 | -8.615850e-47 |
| Msa0121590 | Msa0805500 | 0.803307 | 3.710906e-49 | -8.615850e-47 |
| Msa0121590 | Msa0806920 | 0.856400 | 3.301185e-62 | -8.615850e-47 |
| Msa0121590 | Msa0808270 | 0.813279 | 2.773440e-51 | -8.615850e-47 |
| Msa0121590 | Msa0813720 | 0.814474 | 1.512266e-51 | -8.615850e-47 |
| Msa0121590 | Msa0813740 | 0.808014 | 3.812464e-50 | -8.615850e-47 |
| Msa0121590 | Msa0814250 | 0.810104 | 1.360651e-50 | -8.615850e-47 |
| Msa0121590 | Msa0830540 | 0.808762 | 2.641550e-50 | -8.615850e-47 |
| Msa0121590 | Msa0831870 | 0.829213 | 5.837090e-55 | -8.615850e-47 |
| Msa0121590 | Msa0842830 | 0.862603 | 4.509627e-64 | -8.615850e-47 |
| Msa0121590 | Msa0850960 | 0.810971 | 8.839979e-51 | -8.615850e-47 |
| Msa0121590 | Msa0874500 | 0.802120 | 6.522145e-49 | -8.615850e-47 |
| Msa0121590 | Msa0874570 | 0.801921 | 7.167257e-49 | -8.615850e-47 |
| Msa0121590 | Msa0876200 | 0.806581 | 7.674379e-50 | -8.615850e-47 |
| Msa0121590 | Msa0902760 | 0.808489 | 3.019690e-50 | -8.615850e-47 |
| Msa0121590 | Msa0933290 | 0.805238 | 1.469773e-49 | -8.615850e-47 |
| Msa0121590 | Msa0944190 | 0.809737 | 1.631699e-50 | -8.615850e-47 |
| Msa0121590 | Msa0966270 | 0.816937 | 4.273112e-52 | -8.615850e-47 |
| Msa0121590 | Msa0968590 | 0.800167 | 1.636105e-48 | -8.615850e-47 |
| Msa0121590 | Msa0970030 | 0.812900 | 3.358763e-51 | -8.615850e-47 |
| Msa0121590 | Msa0974810 | 0.803787 | 2.951298e-49 | -8.615850e-47 |
| Msa0121590 | Msa1006840 | 0.825763 | 3.924827e-54 | -8.615850e-47 |
| Msa0121590 | Msa1013400 | 0.813633 | 2.319310e-51 | -8.615850e-47 |
| Msa0121590 | Msa1014420 | 0.802022 | 6.833267e-49 | -8.615850e-47 |
| Msa0121590 | Msa1019240 | 0.826959 | 2.037726e-54 | -8.615850e-47 |
| Msa0121590 | Msa1019260 | 0.828102 | 1.083598e-54 | -8.615850e-47 |
| Msa0121590 | Msa1050200 | 0.810426 | 1.159736e-50 | -8.615850e-47 |
| Msa0121590 | Msa1051200 | 0.800880 | 1.171241e-48 | -8.615850e-47 |
| Msa0121590 | Msa1081150 | 0.871922 | 4.722162e-67 | -8.615850e-47 |
| Msa0121590 | Msa1084470 | 0.830094 | 3.562802e-55 | -8.615850e-47 |
| Msa0121590 | Msa1089840 | 0.831387 | 1.718199e-55 | -8.615850e-47 |
| Msa0121590 | Msa1093530 | 0.805491 | 1.301381e-49 | -8.615850e-47 |
| Msa0121590 | Msa1104140 | 0.844544 | 7.081129e-59 | -8.615850e-47 |
| Msa0121590 | Msa1104210 | 0.830558 | 2.744374e-55 | -8.615850e-47 |
| Msa0121590 | Msa1106700 | 0.803024 | 4.246573e-49 | -8.615850e-47 |
| Msa0121590 | Msa1108820 | 0.830034 | 3.685080e-55 | -8.615850e-47 |
| Msa0121590 | Msa1126510 | 0.821663 | 3.581154e-53 | -8.615850e-47 |
| Msa0121590 | Msa1126770 | 0.815713 | 8.029223e-52 | -8.615850e-47 |
| Msa0121590 | Msa1138870 | 0.833898 | 4.092275e-56 | -8.615850e-47 |
| Msa0121590 | Msa1147900 | 0.818298 | 2.108482e-52 | -8.615850e-47 |
| Msa0121590 | Msa1166010 | 0.803639 | 3.167676e-49 | -8.615850e-47 |
| Msa0121590 | Msa1166860 | 0.825352 | 4.912645e-54 | -8.615850e-47 |
| Msa0121590 | Msa1166870 | 0.825349 | 4.919352e-54 | -8.615850e-47 |
| Msa0121590 | Msa1171360 | 0.815310 | 9.870948e-52 | -8.615850e-47 |
| Msa0121590 | Msa1179950 | 0.819361 | 1.209287e-52 | -8.615850e-47 |
| Msa0121590 | Msa1179980 | 0.816895 | 4.368176e-52 | -8.615850e-47 |
| Msa0121590 | Msa1181850 | 0.801371 | 9.293773e-49 | -8.615850e-47 |
| Msa0121590 | Msa1184370 | 0.814824 | 1.265210e-51 | -8.615850e-47 |
| Msa0121590 | Msa1204250 | 0.800256 | 1.569259e-48 | -8.615850e-47 |
| Msa0121590 | Msa1207270 | 0.804305 | 2.302337e-49 | -8.615850e-47 |
| Msa0121590 | Msa1218600 | 0.829790 | 4.226638e-55 | -8.615850e-47 |
| Msa0121590 | Msa1227690 | 0.821030 | 5.015174e-53 | -8.615850e-47 |
| Msa0121590 | Msa1237940 | 0.822621 | 2.148324e-53 | -8.615850e-47 |
| Msa0121590 | Msa1254710 | 0.815849 | 7.485988e-52 | -8.615850e-47 |
| Msa0121590 | Msa1255040 | -0.801977 | 6.978759e-49 | -8.615850e-47 |
| Msa0121590 | Msa1257510 | 0.813405 | 2.602645e-51 | -8.615850e-47 |
| Msa0121590 | Msa1265630 | 0.810866 | 9.314090e-51 | -8.615850e-47 |
| Msa0121590 | Msa1269300 | 0.833649 | 4.723832e-56 | -8.615850e-47 |
| Msa0121590 | Msa1270620 | 0.815575 | 8.616135e-52 | -8.615850e-47 |
| Msa0121590 | Msa1270690 | 0.819829 | 9.457986e-53 | -8.615850e-47 |
| Msa0121590 | Msa1275360 | 0.801930 | 7.136446e-49 | -8.615850e-47 |
| Msa0121590 | Msa1276930 | 0.801484 | 8.809685e-49 | -8.615850e-47 |
| Msa0121590 | Msa1281190 | 0.819550 | 1.095235e-52 | -8.615850e-47 |
| Msa0121590 | Msa1295110 | 0.805634 | 1.214569e-49 | -8.615850e-47 |
| Msa0121590 | Msa1306990 | 0.818608 | 1.794064e-52 | -8.615850e-47 |
| Msa0121590 | Msa1307950 | 0.808067 | 3.715705e-50 | -8.615850e-47 |
| Msa0121590 | Msa1316780 | 0.837455 | 5.147363e-57 | -8.615850e-47 |
| Msa0121590 | Msa1316830 | 0.836148 | 1.109118e-56 | -8.615850e-47 |
| Msa0121590 | Msa1355700 | 0.805722 | 1.163856e-49 | -8.615850e-47 |
| Msa0121590 | Msa1356440 | 0.819011 | 1.452812e-52 | -8.615850e-47 |
| Msa0121590 | Msa1363330 | 0.830668 | 2.579986e-55 | -8.615850e-47 |
| Msa0121590 | Msa1379760 | 0.840278 | 9.571997e-58 | -8.615850e-47 |
| Msa0121590 | Msa1385100 | 0.813283 | 2.768705e-51 | -8.615850e-47 |
| Msa0121590 | Msa1386600 | 0.831679 | 1.456330e-55 | -8.615850e-47 |
| Msa0121590 | Msa1387420 | 0.834927 | 2.257507e-56 | -8.615850e-47 |
| Msa0121590 | Msa1394290 | 0.830675 | 2.569664e-55 | -8.615850e-47 |
| Msa0121590 | Msa1397810 | 0.829767 | 4.282214e-55 | -8.615850e-47 |
| Msa0121590 | Msa1400190 | 0.805322 | 1.411963e-49 | -8.615850e-47 |
| Msa0121590 | Msa1404010 | 0.812256 | 4.645624e-51 | -8.615850e-47 |
| Msa0121590 | Msa1404190 | 0.826153 | 3.172253e-54 | -8.615850e-47 |
| Msa0121590 | Msa1431040 | 0.812129 | 4.952431e-51 | -8.615850e-47 |
| Msa0121590 | Msa1434140 | 0.801092 | 1.059624e-48 | -8.615850e-47 |
| Msa0121590 | Msa1444310 | 0.821819 | 3.295713e-53 | -8.615850e-47 |
| Msa0121590 | Msa1448690 | 0.834546 | 2.815698e-56 | -8.615850e-47 |
| Msa0121590 | Msa1450280 | 0.822615 | 2.154288e-53 | -8.615850e-47 |
| Msa0121590 | Msa1457920 | 0.817414 | 3.338855e-52 | -8.615850e-47 |
| Msa0121590 | Msa1461280 | 0.810425 | 1.160087e-50 | -8.615850e-47 |
| Msa0121590 | Msa1461490 | 0.810904 | 9.140831e-51 | -8.615850e-47 |
| Msa0121590 | Msa1465080 | 0.806242 | 9.047052e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121590 | MtrunA17_Chr1g0180621 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 2.31e-85 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121590 | AT2G36930.1 | 77.586 | 116 | 26 | 0 | 3 | 118 | 2 | 117 | 1.16e-63 | 192 |
| Msa0121590 | AT2G36930.1 | 61.364 | 88 | 26 | 1 | 31 | 118 | 118 | 197 | 4.92e-23 | 89.0 |
Find 43 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGCCACTGTACTGATTT+AGG | 0.203717 | 1_3:+47541189 | None:intergenic |
| GCAGCCACTGTACTGATTTA+GGG | 0.258130 | 1_3:+47541190 | None:intergenic |
| ATTAACTTTGGTCCATTATC+TGG | 0.259509 | 1_3:+47538261 | None:intergenic |
| CCTAAGAAATCAGATCAAAA+TGG | 0.284489 | 1_3:-47541118 | Msa0121590:exon |
| TGATCTGATTTCTTAGGGTT+AGG | 0.300976 | 1_3:+47541124 | None:intergenic |
| AGAGAAGATATAGATTATAT+TGG | 0.308792 | 1_3:+47538120 | None:intergenic |
| CAATAGTGCTGTCCCATTCC+AGG | 0.370992 | 1_3:+47540940 | None:intergenic |
| GATCTGATTTCTTAGGGTTA+GGG | 0.371471 | 1_3:+47541125 | None:intergenic |
| ATATTGCTTATCTCGTAATA+AGG | 0.388431 | 1_3:+47538161 | None:intergenic |
| CCTCTTGATGAAGATTTGCC+TGG | 0.392427 | 1_3:-47540958 | Msa0121590:CDS |
| GGGATGGGAATGCCAGATAA+TGG | 0.398576 | 1_3:-47538273 | Msa0121590:CDS |
| TGATGAAGATTTGCCTGGAA+TGG | 0.414705 | 1_3:-47540953 | Msa0121590:CDS |
| TGAGAGATTATAGTAGAAAC+TGG | 0.420409 | 1_3:-47538209 | Msa0121590:three_prime_UTR |
| CAACTTGATGCTGATTTAGC+TGG | 0.435360 | 1_3:-47538297 | Msa0121590:CDS |
| CTAAGAAATCAGATCAAAAT+GGG | 0.462676 | 1_3:-47541117 | Msa0121590:exon |
| GATGAAGATTTGCCTGGAAT+GGG | 0.472700 | 1_3:-47540952 | Msa0121590:CDS |
| GGCTGCAGAAGAAGAGTAAG+AGG | 0.475586 | 1_3:-47541173 | Msa0121590:five_prime_UTR |
| AGTTACATAGACATTAACTT+TGG | 0.499727 | 1_3:+47538249 | None:intergenic |
| CTCTTCTTCACCTTCCTGTG+TGG | 0.501586 | 1_3:+47541084 | None:intergenic |
| CTTGATCAAAGGAGATGACA+TGG | 0.505141 | 1_3:-47541025 | Msa0121590:CDS |
| GATCTAAGAGGTAAATTAGG+AGG | 0.506513 | 1_3:+47538091 | None:intergenic |
| CGTTCAAAATTCTTGATCAA+AGG | 0.507305 | 1_3:-47541036 | Msa0121590:CDS |
| AAATCTTCATCAAGAGGTAA+AGG | 0.519690 | 1_3:+47540964 | None:intergenic |
| AAAGGCTTTCTATCTTCTTG+AGG | 0.536393 | 1_3:+47540982 | None:intergenic |
| CTCGTCCCTCACGGCTACAC+TGG | 0.536997 | 1_3:+47540134 | None:intergenic |
| CTTAAAATGCTCGTCCCTCA+CGG | 0.540545 | 1_3:+47540125 | None:intergenic |
| GCTGATTTAGCTGGAGGGAT+GGG | 0.562217 | 1_3:-47538288 | Msa0121590:CDS |
| AGGAAAATGTCCACACAGGA+AGG | 0.564358 | 1_3:-47541094 | Msa0121590:CDS |
| CTTTGCCAGTGTAGCCGTGA+GGG | 0.568259 | 1_3:-47540139 | Msa0121590:CDS |
| CTTGATGCTGATTTAGCTGG+AGG | 0.571593 | 1_3:-47538294 | Msa0121590:CDS |
| TGCTGATTTAGCTGGAGGGA+TGG | 0.572336 | 1_3:-47538289 | Msa0121590:CDS |
| TAGAGATATACTCGCAGTGA+AGG | 0.577943 | 1_3:+47540917 | None:intergenic |
| CCAGGCAAATCTTCATCAAG+AGG | 0.587128 | 1_3:+47540958 | None:intergenic |
| ATCTAAGAGGTAAATTAGGA+GGG | 0.589139 | 1_3:+47538092 | None:intergenic |
| GTGCAGTGTGAAACAAATGA+TGG | 0.596101 | 1_3:-47538337 | Msa0121590:intron |
| TGCAGTGTGAAACAAATGAT+GGG | 0.638754 | 1_3:-47538336 | Msa0121590:intron |
| TCTTTGCCAGTGTAGCCGTG+AGG | 0.645497 | 1_3:-47540140 | Msa0121590:CDS |
| TTGATGCTGATTTAGCTGGA+GGG | 0.659691 | 1_3:-47538293 | Msa0121590:CDS |
| AGAGGTAGAAACCAAACGAG+AGG | 0.665128 | 1_3:-47541155 | Msa0121590:five_prime_UTR |
| AGAAATCAGATCAAAATGGG+AGG | 0.672358 | 1_3:-47541114 | Msa0121590:exon |
| TGGGAGGAAAATGTCCACAC+AGG | 0.692313 | 1_3:-47541098 | Msa0121590:CDS |
| TCAGCATCAAGTTGAGTGTG+TGG | 0.703337 | 1_3:+47538306 | None:intergenic |
| AAAACCCTAAATCAGTACAG+TGG | 0.719032 | 1_3:-47541194 | Msa0121590:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTATTATTATTCTTA+TGG | - | chr1_3:47539030-47539049 | Msa0121590:intron | 10.0% |
| !!! | TGATAATAATTGATTTTGAA+TGG | - | chr1_3:47538485-47538504 | Msa0121590:intron | 15.0% |
| !! | TGATTATGTAAAATTGATTA+TGG | - | chr1_3:47538510-47538529 | Msa0121590:intron | 15.0% |
| !! | AATTGAAAATTGATTATGTT+TGG | - | chr1_3:47538547-47538566 | Msa0121590:intron | 15.0% |
| !! | TATTCACTAATATAAAAACA+GGG | + | chr1_3:47539293-47539312 | None:intergenic | 15.0% |
| !! | ATATTCACTAATATAAAAAC+AGG | + | chr1_3:47539294-47539313 | None:intergenic | 15.0% |
| !!! | ATTGACTTATTTAAACTTTT+GGG | + | chr1_3:47539506-47539525 | None:intergenic | 15.0% |
| !!! | AATTGACTTATTTAAACTTT+TGG | + | chr1_3:47539507-47539526 | None:intergenic | 15.0% |
| !!! | TGAAATTTTTAGAATTATTC+TGG | - | chr1_3:47539771-47539790 | Msa0121590:intron | 15.0% |
| !!! | TGAAATAATTTAGTTTTTTG+TGG | - | chr1_3:47540193-47540212 | Msa0121590:intron | 15.0% |
| !!! | GAAATAATTTAGTTTTTTGT+GGG | - | chr1_3:47540194-47540213 | Msa0121590:intron | 15.0% |
| !!! | AAATAATTTAGTTTTTTGTG+GGG | - | chr1_3:47540195-47540214 | Msa0121590:intron | 15.0% |
| !!! | TTTTAGAGAATTCTAAATTA+TGG | - | chr1_3:47540327-47540346 | Msa0121590:intron | 15.0% |
| !! | TTTAGAGAATTCTAAATTAT+GGG | - | chr1_3:47540328-47540347 | Msa0121590:intron | 15.0% |
| !!! | ATTTTGAGTTGAAATGATTT+GGG | - | chr1_3:47538768-47538787 | Msa0121590:intron | 20.0% |
| !!! | AGAATTGATTAGAACATTTT+TGG | + | chr1_3:47538908-47538927 | None:intergenic | 20.0% |
| !!! | ATTTTAAGACAAAAAAACAC+AGG | - | chr1_3:47539205-47539224 | Msa0121590:intron | 20.0% |
| !! | AACTATTAGAAAAGATTTAG+AGG | - | chr1_3:47540011-47540030 | Msa0121590:intron | 20.0% |
| !! | TATATATTACTTAGCAAATG+CGG | + | chr1_3:47540305-47540324 | None:intergenic | 20.0% |
| !! | TTAGAGAATTCTAAATTATG+GGG | - | chr1_3:47540329-47540348 | Msa0121590:intron | 20.0% |
| !!! | GCTGAAATTGAATTATTTTT+CGG | - | chr1_3:47540700-47540719 | Msa0121590:intron | 20.0% |
| !! | AAATAAACAGTAATATCAGA+AGG | + | chr1_3:47540958-47540977 | None:intergenic | 20.0% |
| !! | AGAGAAGATATAGATTATAT+TGG | + | chr1_3:47541198-47541217 | None:intergenic | 20.0% |
| !!! | CATTTTGATCTGATTTCTTA+GGG | + | chr1_3:47538199-47538218 | None:intergenic | 25.0% |
| ! | CTAAGAAATCAGATCAAAAT+GGG | - | chr1_3:47538198-47538217 | Msa0121590:three_prime_UTR | 25.0% |
| ! | TTGATTATGTTTGGATTCAT+TGG | - | chr1_3:47538556-47538575 | Msa0121590:intron | 25.0% |
| ! | TGATTATGTTTGGATTCATT+GGG | - | chr1_3:47538557-47538576 | Msa0121590:intron | 25.0% |
| !!! | GATTTTGAGTTGAAATGATT+TGG | - | chr1_3:47538767-47538786 | Msa0121590:intron | 25.0% |
| !!! | ACACCTCTAAAATCAATTTT+TGG | - | chr1_3:47538928-47538947 | Msa0121590:intron | 25.0% |
| ! | TTACATACAAAGTGTATGTT+TGG | + | chr1_3:47538971-47538990 | None:intergenic | 25.0% |
| ! | ATTCTTATGGTTAAGACTTA+AGG | - | chr1_3:47539043-47539062 | Msa0121590:intron | 25.0% |
| !! | TGTTTTTCGTTCTTATGTTT+TGG | - | chr1_3:47539103-47539122 | Msa0121590:intron | 25.0% |
| ! | AACATATCTTTCTTTCAGAT+AGG | - | chr1_3:47539385-47539404 | Msa0121590:intron | 25.0% |
| ! | ACATATCTTTCTTTCAGATA+GGG | - | chr1_3:47539386-47539405 | Msa0121590:intron | 25.0% |
| ! | ATAAGTCAATTAACCATAAC+TGG | - | chr1_3:47539516-47539535 | Msa0121590:intron | 25.0% |
| ! | AACATAGACAAGGTATATAT+AGG | + | chr1_3:47539636-47539655 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | + | chr1_3:47539994-47540013 | None:intergenic | 25.0% |
| ! | TAATGAGTTTGATCCAAATA+TGG | - | chr1_3:47540035-47540054 | Msa0121590:intron | 25.0% |
| ! | GTTCTATCATAATCCATATT+TGG | + | chr1_3:47540051-47540070 | None:intergenic | 25.0% |
| !! | TGGATTATGATAGAACATTT+TGG | - | chr1_3:47540055-47540074 | Msa0121590:intron | 25.0% |
| ! | AACATAAAACTACATACAGT+GGG | + | chr1_3:47540466-47540485 | None:intergenic | 25.0% |
| !! | GTTTTATGTTGTTCAGTAAT+TGG | - | chr1_3:47540476-47540495 | Msa0121590:intron | 25.0% |
| !! | TGGATTTATACATGTTTTCA+AGG | - | chr1_3:47540496-47540515 | Msa0121590:intron | 25.0% |
| !! | TTTGCGCATATATATTGTTT+TGG | - | chr1_3:47540580-47540599 | Msa0121590:intron | 25.0% |
| ! | TAAGTGCATTATGATGTAAT+AGG | - | chr1_3:47540788-47540807 | Msa0121590:intron | 25.0% |
| !! | AGAGTATAGCTTTTCATTAA+AGG | - | chr1_3:47540884-47540903 | Msa0121590:intron | 25.0% |
| ! | AGTTACATAGACATTAACTT+TGG | + | chr1_3:47541069-47541088 | None:intergenic | 25.0% |
| ! | ATATTGCTTATCTCGTAATA+AGG | + | chr1_3:47541157-47541176 | None:intergenic | 25.0% |
| !! | CCATTTTGATCTGATTTCTT+AGG | + | chr1_3:47538200-47538219 | None:intergenic | 30.0% |
| CCTAAGAAATCAGATCAAAA+TGG | - | chr1_3:47538197-47538216 | Msa0121590:three_prime_UTR | 30.0% | |
| CGTTCAAAATTCTTGATCAA+AGG | - | chr1_3:47538279-47538298 | Msa0121590:CDS | 30.0% | |
| AAATCTTCATCAAGAGGTAA+AGG | + | chr1_3:47538354-47538373 | None:intergenic | 30.0% | |
| GTTTGCAAAATTTGTGTGTT+TGG | - | chr1_3:47538454-47538473 | Msa0121590:intron | 30.0% | |
| !!! | AATTTGTGTGTTTGGTTTTG+CGG | - | chr1_3:47538462-47538481 | Msa0121590:intron | 30.0% |
| CGAAACTAATGATTTAGTGT+AGG | - | chr1_3:47538641-47538660 | Msa0121590:intron | 30.0% | |
| AACTAATGATTTAGTGTAGG+AGG | - | chr1_3:47538644-47538663 | Msa0121590:intron | 30.0% | |
| TGTATGTGTATGTGTATGTT+TGG | - | chr1_3:47538725-47538744 | Msa0121590:intron | 30.0% | |
| AATTGATACTACTTGAAGCT+AGG | + | chr1_3:47538868-47538887 | None:intergenic | 30.0% | |
| ! | CAATTTTGCCTCTTAAAATG+TGG | - | chr1_3:47538992-47539011 | Msa0121590:intron | 30.0% |
| CGAAAAACAAAAAACGAGTT+GGG | + | chr1_3:47539092-47539111 | None:intergenic | 30.0% | |
| ACGAAAAACAAAAAACGAGT+TGG | + | chr1_3:47539093-47539112 | None:intergenic | 30.0% | |
| !!! | TTTCGTTCTTATGTTTTGGT+TGG | - | chr1_3:47539107-47539126 | Msa0121590:intron | 30.0% |
| GAATGTTCGATAAGATTGAA+AGG | + | chr1_3:47539269-47539288 | None:intergenic | 30.0% | |
| GTGAATATGCTTTATAGTTG+AGG | - | chr1_3:47539306-47539325 | Msa0121590:intron | 30.0% | |
| AGAAGAAAACACTTCAAAAC+AGG | + | chr1_3:47539337-47539356 | None:intergenic | 30.0% | |
| ACAAAATTCAGCTTGATTGA+AGG | + | chr1_3:47539463-47539482 | None:intergenic | 30.0% | |
| ! | CTGAATTTTGTCCTTAATCT+AGG | - | chr1_3:47539472-47539491 | Msa0121590:intron | 30.0% |
| ! | GGACAAGCATATTTTACAAA+GGG | + | chr1_3:47539681-47539700 | None:intergenic | 30.0% |
| !! | ATTATTCTGGAATGTTGTGT+TGG | - | chr1_3:47539784-47539803 | Msa0121590:intron | 30.0% |
| ! | GTAGTATGAAGAGTATATGT+CGG | - | chr1_3:47539947-47539966 | Msa0121590:intron | 30.0% |
| AGCATTCAAAATTGTGTGTT+AGG | - | chr1_3:47540380-47540399 | Msa0121590:intron | 30.0% | |
| TACCAAGTAATTAACATGCA+TGG | + | chr1_3:47540435-47540454 | None:intergenic | 30.0% | |
| CAACATAAAACTACATACAG+TGG | + | chr1_3:47540467-47540486 | None:intergenic | 30.0% | |
| CAAGTGAAGATACTAGAAAT+TGG | + | chr1_3:47540536-47540555 | None:intergenic | 30.0% | |
| CTTCACTTGAAATCTTAACT+TGG | - | chr1_3:47540547-47540566 | Msa0121590:intron | 30.0% | |
| AAACATAGAGTTTGCAAGAA+TGG | + | chr1_3:47540618-47540637 | None:intergenic | 30.0% | |
| ATGAGGTGGTTAAAATTGAT+TGG | + | chr1_3:47540750-47540769 | None:intergenic | 30.0% | |
| !! | ATTTAGTTTGCACTATGATG+AGG | + | chr1_3:47540767-47540786 | None:intergenic | 30.0% |
| ATTAACTTTGGTCCATTATC+TGG | + | chr1_3:47541057-47541076 | None:intergenic | 30.0% | |
| !! | TGTAACTTTCTTTTTCGTAG+TGG | - | chr1_3:47541082-47541101 | Msa0121590:CDS | 30.0% |
| TGAGAGATTATAGTAGAAAC+TGG | - | chr1_3:47541106-47541125 | Msa0121590:exon | 30.0% | |
| AAAACCCTAAATCAGTACAG+TGG | - | chr1_3:47538121-47538140 | Msa0121590:three_prime_UTR | 35.0% | |
| GATCTGATTTCTTAGGGTTA+GGG | + | chr1_3:47538193-47538212 | None:intergenic | 35.0% | |
| TGATCTGATTTCTTAGGGTT+AGG | + | chr1_3:47538194-47538213 | None:intergenic | 35.0% | |
| AGAAATCAGATCAAAATGGG+AGG | - | chr1_3:47538201-47538220 | Msa0121590:three_prime_UTR | 35.0% | |
| ! | CAAGAATTTTGAACGACGAT+CGG | + | chr1_3:47538274-47538293 | None:intergenic | 35.0% |
| AAAGGCTTTCTATCTTCTTG+AGG | + | chr1_3:47538336-47538355 | None:intergenic | 35.0% | |
| !! | GGGCCAAAAATTGATTTTAG+AGG | + | chr1_3:47538934-47538953 | None:intergenic | 35.0% |
| ! | TGTTTGGTTCCATTTGTAGA+GGG | + | chr1_3:47538955-47538974 | None:intergenic | 35.0% |
| ! | ATGTTTGGTTCCATTTGTAG+AGG | + | chr1_3:47538956-47538975 | None:intergenic | 35.0% |
| ! | GTTTCGTTCCACATTTTAAG+AGG | + | chr1_3:47539003-47539022 | None:intergenic | 35.0% |
| ! | TCTATCAAGTGTTGTTCGTT+TGG | - | chr1_3:47539138-47539157 | Msa0121590:intron | 35.0% |
| AGACAAAAAAACACAGGAGA+CGG | - | chr1_3:47539211-47539230 | Msa0121590:intron | 35.0% | |
| !! | GAGTATTGAAACTGAAGCAA+AGG | + | chr1_3:47539244-47539263 | None:intergenic | 35.0% |
| GTATGAACTCATAAAGCAGA+TGG | - | chr1_3:47539357-47539376 | Msa0121590:intron | 35.0% | |
| CTTCCATCCAATTTCTTACA+GGG | + | chr1_3:47539546-47539565 | None:intergenic | 35.0% | |
| ACTTCCATCCAATTTCTTAC+AGG | + | chr1_3:47539547-47539566 | None:intergenic | 35.0% | |
| TGTAAGAAATTGGATGGAAG+TGG | - | chr1_3:47539546-47539565 | Msa0121590:intron | 35.0% | |
| GGTAAATGAAGTTATGCTTG+TGG | - | chr1_3:47539567-47539586 | Msa0121590:intron | 35.0% | |
| AGACAAGGTATATATAGGAC+TGG | + | chr1_3:47539631-47539650 | None:intergenic | 35.0% | |
| CTTAAAGGCAAACATAGACA+AGG | + | chr1_3:47539646-47539665 | None:intergenic | 35.0% | |
| ! | GGGACAAGCATATTTTACAA+AGG | + | chr1_3:47539682-47539701 | None:intergenic | 35.0% |
| GAAATAAGCTTAGGCAGTTT+GGG | - | chr1_3:47539897-47539916 | Msa0121590:intron | 35.0% | |
| CTTCATACTACAGAATCTAC+AGG | + | chr1_3:47539938-47539957 | None:intergenic | 35.0% | |
| ! | ACTAAGTGAGATTAGCTACA+TGG | + | chr1_3:47540092-47540111 | None:intergenic | 35.0% |
| ATGTAGCTAATCTCACTTAG+TGG | - | chr1_3:47540091-47540110 | Msa0121590:intron | 35.0% | |
| TGTAGCTAATCTCACTTAGT+GGG | - | chr1_3:47540092-47540111 | Msa0121590:intron | 35.0% | |
| TAATCTCACTTAGTGGGATA+AGG | - | chr1_3:47540098-47540117 | Msa0121590:intron | 35.0% | |
| ! | TGGTCATTGTTGTTGTATTC+TGG | - | chr1_3:47540123-47540142 | Msa0121590:CDS | 35.0% |
| ! | TTCTTTCGAAGCTGCATTTT+GGG | + | chr1_3:47540360-47540379 | None:intergenic | 35.0% |
| ! | TTTCTTTCGAAGCTGCATTT+TGG | + | chr1_3:47540361-47540380 | None:intergenic | 35.0% |
| CTCCATGCATGTTAATTACT+TGG | - | chr1_3:47540430-47540449 | Msa0121590:intron | 35.0% | |
| TGCAGTGTGAAACAAATGAT+GGG | - | chr1_3:47540979-47540998 | Msa0121590:CDS | 35.0% | |
| CTTGATCAAAGGAGATGACA+TGG | - | chr1_3:47538290-47538309 | Msa0121590:CDS | 40.0% | |
| TGATGAAGATTTGCCTGGAA+TGG | - | chr1_3:47538362-47538381 | Msa0121590:intron | 40.0% | |
| GATGAAGATTTGCCTGGAAT+GGG | - | chr1_3:47538363-47538382 | Msa0121590:intron | 40.0% | |
| TAGAGATATACTCGCAGTGA+AGG | + | chr1_3:47538401-47538420 | None:intergenic | 40.0% | |
| GTGTAGGAGGTTTAGTATCA+TGG | - | chr1_3:47538657-47538676 | Msa0121590:intron | 40.0% | |
| TAGGAGGTTTAGTATCATGG+TGG | - | chr1_3:47538660-47538679 | Msa0121590:intron | 40.0% | |
| AGGAGGTTTAGTATCATGGT+GGG | - | chr1_3:47538661-47538680 | Msa0121590:intron | 40.0% | |
| ACGGTGGATCATTGTGATTA+TGG | - | chr1_3:47538696-47538715 | Msa0121590:intron | 40.0% | |
| !!! | ATTTTTGGCCCCTCTACAAA+TGG | - | chr1_3:47538943-47538962 | Msa0121590:intron | 40.0% |
| ! | GTTTGGTTCCATTTGTAGAG+GGG | + | chr1_3:47538954-47538973 | None:intergenic | 40.0% |
| GGGAAAATGAGCCTAGATTA+AGG | + | chr1_3:47539486-47539505 | None:intergenic | 40.0% | |
| TGGAAGACCCTGTAAGAAAT+TGG | - | chr1_3:47539536-47539555 | Msa0121590:intron | 40.0% | |
| AGACCCTGTAAGAAATTGGA+TGG | - | chr1_3:47539540-47539559 | Msa0121590:intron | 40.0% | |
| GGGAGTAAAAACTCGCTTAA+AGG | + | chr1_3:47539661-47539680 | None:intergenic | 40.0% | |
| CTGCAATATAAGCTGGGAAT+GGG | + | chr1_3:47539702-47539721 | None:intergenic | 40.0% | |
| TCTGCAATATAAGCTGGGAA+TGG | + | chr1_3:47539703-47539722 | None:intergenic | 40.0% | |
| GCAAGTCTGCAATATAAGCT+GGG | + | chr1_3:47539708-47539727 | None:intergenic | 40.0% | |
| TGCAAGTCTGCAATATAAGC+TGG | + | chr1_3:47539709-47539728 | None:intergenic | 40.0% | |
| AGGTGGTAGGAAATAAGCTT+AGG | - | chr1_3:47539888-47539907 | Msa0121590:intron | 40.0% | |
| GGAAATAAGCTTAGGCAGTT+TGG | - | chr1_3:47539896-47539915 | Msa0121590:intron | 40.0% | |
| !! | AGTATATGTCGGCTCAAAAG+AGG | - | chr1_3:47539958-47539977 | Msa0121590:intron | 40.0% |
| !!! | TAGTTTTTTGTGGGGCAATG+TGG | - | chr1_3:47540203-47540222 | Msa0121590:intron | 40.0% |
| !!! | AGTTTTTTGTGGGGCAATGT+GGG | - | chr1_3:47540204-47540223 | Msa0121590:intron | 40.0% |
| TGCAGTGAACTAGAAGCAAT+GGG | + | chr1_3:47540674-47540693 | None:intergenic | 40.0% | |
| ATGCAGTGAACTAGAAGCAA+TGG | + | chr1_3:47540675-47540694 | None:intergenic | 40.0% | |
| ! | TAGTTTGCACTATGATGAGG+TGG | + | chr1_3:47540764-47540783 | None:intergenic | 40.0% |
| GTGCAGTGTGAAACAAATGA+TGG | - | chr1_3:47540978-47540997 | Msa0121590:CDS | 40.0% | |
| !! | CAACTTGATGCTGATTTAGC+TGG | - | chr1_3:47541018-47541037 | Msa0121590:CDS | 40.0% |
| !! | TTGATGCTGATTTAGCTGGA+GGG | - | chr1_3:47541022-47541041 | Msa0121590:CDS | 40.0% |
| !! | GCAGCCACTGTACTGATTTA+GGG | + | chr1_3:47538128-47538147 | None:intergenic | 45.0% |
| !! | TGCAGCCACTGTACTGATTT+AGG | + | chr1_3:47538129-47538148 | None:intergenic | 45.0% |
| AGAGGTAGAAACCAAACGAG+AGG | - | chr1_3:47538160-47538179 | Msa0121590:three_prime_UTR | 45.0% | |
| ! | AGGGTTTTTCACCTCTCGTT+TGG | + | chr1_3:47538174-47538193 | None:intergenic | 45.0% |
| AGGAAAATGTCCACACAGGA+AGG | - | chr1_3:47538221-47538240 | Msa0121590:three_prime_UTR | 45.0% | |
| CCAGGCAAATCTTCATCAAG+AGG | + | chr1_3:47538360-47538379 | None:intergenic | 45.0% | |
| CCTCTTGATGAAGATTTGCC+TGG | - | chr1_3:47538357-47538376 | Msa0121590:intron | 45.0% | |
| ! | TGGTGGGTATGTCAACATCA+CGG | - | chr1_3:47538677-47538696 | Msa0121590:intron | 45.0% |
| CTTAAAATGCTCGTCCCTCA+CGG | + | chr1_3:47539193-47539212 | None:intergenic | 45.0% | |
| CTTACAGGGTCTTCCAGTTA+TGG | + | chr1_3:47539532-47539551 | None:intergenic | 45.0% | |
| GGAATGTTGTGTTGGATGAG+TGG | - | chr1_3:47539792-47539811 | Msa0121590:intron | 45.0% | |
| GGATGAGTGGTAAGACTAGA+CGG | - | chr1_3:47539805-47539824 | Msa0121590:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+GGG | - | chr1_3:47539806-47539825 | Msa0121590:intron | 45.0% | |
| AGACTAGACGGGATAGGATT+AGG | - | chr1_3:47539817-47539836 | Msa0121590:intron | 45.0% | |
| CTCCAACTCTCTCTCTCTAA+CGG | + | chr1_3:47539850-47539869 | None:intergenic | 45.0% | |
| AGTAGCACCTGTGGTAGAAA+AGG | - | chr1_3:47539868-47539887 | Msa0121590:intron | 45.0% | |
| TCACTTAGTGGGATAAGGCT+TGG | - | chr1_3:47540103-47540122 | Msa0121590:intron | 45.0% | |
| !!! | GTTTTTTGTGGGGCAATGTG+GGG | - | chr1_3:47540205-47540224 | Msa0121590:intron | 45.0% |
| !! | TCAGCATCAAGTTGAGTGTG+TGG | + | chr1_3:47541012-47541031 | None:intergenic | 45.0% |
| !! | CTTGATGCTGATTTAGCTGG+AGG | - | chr1_3:47541021-47541040 | Msa0121590:CDS | 45.0% |
| GGCTGCAGAAGAAGAGTAAG+AGG | - | chr1_3:47538142-47538161 | Msa0121590:three_prime_UTR | 50.0% | |
| TGGGAGGAAAATGTCCACAC+AGG | - | chr1_3:47538217-47538236 | Msa0121590:three_prime_UTR | 50.0% | |
| CTCTTCTTCACCTTCCTGTG+TGG | + | chr1_3:47538234-47538253 | None:intergenic | 50.0% | |
| CAATAGTGCTGTCCCATTCC+AGG | + | chr1_3:47538378-47538397 | None:intergenic | 50.0% | |
| TGGGTATGTCAACATCACGG+TGG | - | chr1_3:47538680-47538699 | Msa0121590:intron | 50.0% | |
| GTGGTAAGACTAGACGGGAT+AGG | - | chr1_3:47539811-47539830 | Msa0121590:intron | 50.0% | |
| CACCGTTAGAGAGAGAGAGT+TGG | - | chr1_3:47539845-47539864 | Msa0121590:intron | 50.0% | |
| AGCACCTGTGGTAGAAAAGG+TGG | - | chr1_3:47539871-47539890 | Msa0121590:intron | 50.0% | |
| ! | CCTACCACCTTTTCTACCAC+AGG | + | chr1_3:47539878-47539897 | None:intergenic | 50.0% |
| CCTGTGGTAGAAAAGGTGGT+AGG | - | chr1_3:47539875-47539894 | Msa0121590:intron | 50.0% | |
| !! | TGTCGGCTCAAAAGAGGTAG+CGG | - | chr1_3:47539964-47539983 | Msa0121590:intron | 50.0% |
| !! | TGCTGATTTAGCTGGAGGGA+TGG | - | chr1_3:47541026-47541045 | Msa0121590:CDS | 50.0% |
| ! | GCTGATTTAGCTGGAGGGAT+GGG | - | chr1_3:47541027-47541046 | Msa0121590:CDS | 50.0% |
| GGGATGGGAATGCCAGATAA+TGG | - | chr1_3:47541042-47541061 | Msa0121590:CDS | 50.0% | |
| TCTTTGCCAGTGTAGCCGTG+AGG | - | chr1_3:47539175-47539194 | Msa0121590:intron | 55.0% | |
| CTTTGCCAGTGTAGCCGTGA+GGG | - | chr1_3:47539176-47539195 | Msa0121590:intron | 55.0% | |
| GAGAGTTGGAGTAGCACCTG+TGG | - | chr1_3:47539859-47539878 | Msa0121590:intron | 55.0% | |
| GCAATGTGGGGCAAGGTTGA+TGG | - | chr1_3:47540217-47540236 | Msa0121590:intron | 55.0% | |
| TTGTGGGGCAATGTGGGGCA+AGG | - | chr1_3:47540210-47540229 | Msa0121590:intron | 60.0% | |
| CTCGTCCCTCACGGCTACAC+TGG | + | chr1_3:47539184-47539203 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 47538106 | 47541231 | 47538106 | ID=Msa0121590;Name=Msa0121590 |
| chr1_3 | mRNA | 47538106 | 47541231 | 47538106 | ID=Msa0121590-mRNA-1;Parent=Msa0121590;Name=Msa0121590-mRNA-1;_AED=0.01;_eAED=0.01;_QI=110|1|1|1|0|0.66|3|145|119 |
| chr1_3 | exon | 47538106 | 47538353 | 47538106 | ID=Msa0121590-mRNA-1:exon:14346;Parent=Msa0121590-mRNA-1 |
| chr1_3 | exon | 47540105 | 47540167 | 47540105 | ID=Msa0121590-mRNA-1:exon:14345;Parent=Msa0121590-mRNA-1 |
| chr1_3 | exon | 47540928 | 47541231 | 47540928 | ID=Msa0121590-mRNA-1:exon:14344;Parent=Msa0121590-mRNA-1 |
| chr1_3 | five_prime_UTR | 47541122 | 47541231 | 47541122 | ID=Msa0121590-mRNA-1:five_prime_utr;Parent=Msa0121590-mRNA-1 |
| chr1_3 | CDS | 47540928 | 47541121 | 47540928 | ID=Msa0121590-mRNA-1:cds;Parent=Msa0121590-mRNA-1 |
| chr1_3 | CDS | 47540105 | 47540167 | 47540105 | ID=Msa0121590-mRNA-1:cds;Parent=Msa0121590-mRNA-1 |
| chr1_3 | CDS | 47538251 | 47538353 | 47538251 | ID=Msa0121590-mRNA-1:cds;Parent=Msa0121590-mRNA-1 |
| chr1_3 | three_prime_UTR | 47538106 | 47538250 | 47538106 | ID=Msa0121590-mRNA-1:three_prime_utr;Parent=Msa0121590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
