AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0001520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0001520 MtrunA17_Chr3g0145891 97.701 348 8 0 1 348 1 348 0.0 701
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0001520 AT2G44270.1 85.756 344 46 2 8 348 12 355 0.0 610
Msa0001520 AT1G76170.1 83.699 319 50 1 32 348 14 332 0.0 554
Msa0001520 AT1G76170.7 75.852 352 50 2 32 348 14 365 0.0 536
Msa0001520 AT1G76170.4 85.232 237 33 1 114 348 9 245 1.43e-149 421
Msa0001520 AT1G76170.3 85.232 237 33 1 114 348 9 245 1.43e-149 421
Msa0001520 AT1G76170.5 85.232 237 33 1 114 348 9 245 1.43e-149 421
Msa0001520 AT1G76170.2 74.815 270 33 2 114 348 9 278 1.32e-142 405
Msa0001520 AT1G76170.6 81.863 204 35 1 147 348 3 206 6.07e-118 340

Find 138 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATCGAGGTTTGCCTAAAT+TGG 0.168714 1_1:+3207459 Msa0001520:CDS
ATCCTTAAACTTAAAGTAAA+AGG 0.169323 1_1:-3208856 None:intergenic
TCACCACTTTATCTGCTTTC+AGG 0.179782 1_1:-3206604 None:intergenic
GGTATTCAATTCAGTAATTA+TGG 0.206691 1_1:+3208989 Msa0001520:three_prime_UTR
CATTCCCTGTTCAGGCATTT+TGG 0.211621 1_1:-3207028 None:intergenic
TTATCATGCTGGAGAGGTTC+TGG 0.214255 1_1:+3208706 Msa0001520:three_prime_UTR
GCAGAAGACGTGTTAATATT+AGG 0.231582 1_1:-3209312 None:intergenic
AAAGCTTGTGTTCTGCTTGA+TGG 0.278301 1_1:+3207433 Msa0001520:CDS
GTTCTCTTTATGCTCAAGTT+TGG 0.288520 1_1:+3208771 Msa0001520:three_prime_UTR
ATCGTGAACGCGGTTGAGTT+TGG 0.296360 1_1:-3206345 None:intergenic
CTGGAGAGGTTCTGGGTGTC+AGG 0.299440 1_1:+3208714 Msa0001520:three_prime_UTR
CATAGAAATCAGATTGAGTA+TGG 0.304991 1_1:+3206443 Msa0001520:CDS
TCAAGGATTTGGAGAGAATC+AGG 0.330630 1_1:+3206873 Msa0001520:CDS
CTTGCAGTTTGCAATTATCT+AGG 0.335601 1_1:+3208941 Msa0001520:three_prime_UTR
TAATCCCACATCATGTTATA+AGG 0.349880 1_1:+3209109 Msa0001520:three_prime_UTR
CTCCGTCCAATTCCCAATTT+AGG 0.357743 1_1:-3207472 None:intergenic
CACTACCAAAATGCCTGAAC+AGG 0.365011 1_1:+3207023 Msa0001520:CDS
GCGATACTCCGATAGGGTTT+AGG 0.365671 1_1:+3206079 Msa0001520:five_prime_UTR
TCGTGAGTTCATCAAGGATT+TGG 0.380248 1_1:+3206862 Msa0001520:CDS
TTCTTTCATGTATCCATCAT+AGG 0.381974 1_1:-3208512 None:intergenic
CGAGTCGCCATCGGAGCTTC+CGG 0.383557 1_1:+3206287 Msa0001520:CDS
ATTCTCGACATCATCAAATC+AGG 0.388920 1_1:+3206979 Msa0001520:CDS
TAAAATTGAAATTATGAAGT+TGG 0.393598 1_1:+3209036 Msa0001520:three_prime_UTR
GGTTTGCCTAAATTGGGAAT+TGG 0.398830 1_1:+3207466 Msa0001520:CDS
CTCAACCGCGTTCACGATTA+CGG 0.403364 1_1:+3206350 Msa0001520:CDS
TACTTGAAAGGTTTGCATCT+AGG 0.405107 1_1:-3206740 None:intergenic
TTTCACAAAGGAGAACCTAA+TGG 0.409363 1_1:+3208666 Msa0001520:three_prime_UTR
TCTCAATGCTCTTTGTTCCA+TGG 0.409913 1_1:-3207531 None:intergenic
AATCGAGGTTTGCCTAAATT+GGG 0.412591 1_1:+3207460 Msa0001520:CDS
AGATGCAGTTCAATCATAAC+AGG 0.415710 1_1:+3206701 Msa0001520:CDS
CGTTCACACATTCCCTGTTC+AGG 0.416347 1_1:-3207036 None:intergenic
ATTCTCTGCAAATCTGTTGA+AGG 0.418305 1_1:-3206193 None:intergenic
CTGTGGTTATATTTCTAGTC+AGG 0.427289 1_1:+3207059 Msa0001520:CDS
TGAAATTATGAAGTTGGCTA+AGG 0.432295 1_1:+3209042 Msa0001520:three_prime_UTR
ACAGCATACTTCAATCCATT+AGG 0.432651 1_1:-3208681 None:intergenic
TGAAAGAAGGGGTTGGAGAT+GGG 0.434335 1_1:+3208527 Msa0001520:three_prime_UTR
ATTGGGAATTGGACGGAGTC+GGG 0.434977 1_1:+3207477 Msa0001520:CDS
TATCATGCTGGAGAGGTTCT+GGG 0.440318 1_1:+3208707 Msa0001520:three_prime_UTR
ACTTGAAAGGTTTGCATCTA+GGG 0.444185 1_1:-3206739 None:intergenic
TTGCAATTATCTAGGCTACT+TGG 0.448017 1_1:+3208949 Msa0001520:three_prime_UTR
ATGAAAGAAGGGGTTGGAGA+TGG 0.453760 1_1:+3208526 Msa0001520:three_prime_UTR
AATCTAGGGCTTACCTATGA+TGG 0.456946 1_1:+3208499 Msa0001520:intron
CCAACCGTACAAATCCTTGT+AGG 0.458072 1_1:-3206486 None:intergenic
GCAAAACCACGATAAGCATT+TGG 0.460833 1_1:-3206839 None:intergenic
CTCGGTCGCCGCGGTTGAAG+AGG 0.461559 1_1:-3206268 None:intergenic
TTTCAAGTACACTTATGAAA+AGG 0.467314 1_1:+3206754 Msa0001520:CDS
GGTAGAAGAAGAGAAGAGAA+TGG 0.470904 1_1:+3206100 Msa0001520:exon
TGGTCATGAAGACATGATAA+TGG 0.472410 1_1:+3208550 Msa0001520:three_prime_UTR
AGTATTCCGTCGGCAGGCAC+TGG 0.472532 1_1:+3206565 Msa0001520:CDS
TCCTTAAACTTAAAGTAAAA+GGG 0.484817 1_1:-3208855 None:intergenic
GAAGAAGAGAAGAGAATGGA+AGG 0.488537 1_1:+3206104 Msa0001520:exon
TTCTCTGCAAATCTGTTGAA+GGG 0.489182 1_1:-3206192 None:intergenic
GGACGGAGTCGGGTTGCCAT+TGG 0.493561 1_1:+3207487 Msa0001520:CDS
GATGATGTCGAGAATTGCCC+TGG 0.494801 1_1:-3206971 None:intergenic
TGTCAGGGAGTAGAGTCTTT+CGG 0.499718 1_1:+3208730 Msa0001520:three_prime_UTR
CAATTATCTAGGCTACTTGG+TGG 0.502051 1_1:+3208952 Msa0001520:three_prime_UTR
AAAGCAGATAAAGTGGTGAC+TGG 0.502432 1_1:+3206608 Msa0001520:CDS
TCAATCATAACAGGTGAAGA+TGG 0.503044 1_1:+3206710 Msa0001520:CDS
TATGATGGATACATGAAAGA+AGG 0.504310 1_1:+3208514 Msa0001520:three_prime_UTR
AAGAGAATCGTCGCGGTAGC+CGG 0.507747 1_1:-3206411 None:intergenic
CGACGGAGAGGAGGAAGAGA+TGG 0.508983 1_1:-3206376 None:intergenic
GAAAGGTTTGCATCTAGGGA+TGG 0.511544 1_1:-3206735 None:intergenic
TCGGGTTGCCATTGGTTGCA+AGG 0.511777 1_1:+3207495 Msa0001520:CDS
AATTGGGAATTGGACGGAGT+CGG 0.513581 1_1:+3207476 Msa0001520:CDS
GTGCTGTTAAACATATTAAG+AGG 0.514072 1_1:+3206659 Msa0001520:CDS
GACGAGATCGTGAAACTGAT+CGG 0.520675 1_1:+3206515 Msa0001520:CDS
GCCGGTGATGCCCTCGTCGA+CGG 0.523389 1_1:-3206393 None:intergenic
CGGAAGCTCCGATGGCGACT+CGG 0.524339 1_1:-3206286 None:intergenic
CTGTGGAGTATTCCGTCGGC+AGG 0.524599 1_1:+3206559 Msa0001520:CDS
CGCGGCGACCGAGTCGCCAT+CGG 0.524812 1_1:+3206278 Msa0001520:CDS
CTCAATCTGATTTCTATGAA+CGG 0.526078 1_1:-3206438 None:intergenic
CTCGATCCAGTGCCTGCCGA+CGG 0.528294 1_1:-3206571 None:intergenic
GACGGTTGAGTCTTTGCCGC+CGG 0.528852 1_1:-3206306 None:intergenic
TGGAGAGGTTCTGGGTGTCA+GGG 0.531459 1_1:+3208715 Msa0001520:three_prime_UTR
TTCTCGACATCATCAAATCA+GGG 0.532862 1_1:+3206980 Msa0001520:CDS
AAGAACAATTGCACCTTCTG+TGG 0.538204 1_1:+3206542 Msa0001520:CDS
TGGCTAAGGGAAAGATTAGG+TGG 0.538841 1_1:+3209056 Msa0001520:three_prime_UTR
ATGATGGATACATGAAAGAA+GGG 0.543140 1_1:+3208515 Msa0001520:three_prime_UTR
GAAATTATGAAGTTGGCTAA+GGG 0.543239 1_1:+3209043 Msa0001520:three_prime_UTR
AAAGGTTTGCATCTAGGGAT+GGG 0.544209 1_1:-3206734 None:intergenic
GATCACCTTATAACATGATG+TGG 0.544530 1_1:-3209114 None:intergenic
AGTTGGCTAAGGGAAAGATT+AGG 0.546118 1_1:+3209053 Msa0001520:three_prime_UTR
TTTGCCGCCGGAAGCTCCGA+TGG 0.549277 1_1:-3206294 None:intergenic
GGTCGCCGCGGTTGAAGAGG+CGG 0.550640 1_1:-3206265 None:intergenic
TTCTTCTACCTAAACCCTAT+CGG 0.554472 1_1:-3206087 None:intergenic
TTCCTCCTCTCCGTCGACGA+GGG 0.558587 1_1:+3206383 Msa0001520:CDS
GGATACATGAAAGAAGGGGT+TGG 0.560149 1_1:+3208520 Msa0001520:three_prime_UTR
GTAGGCATCATATCATATGA+AGG 0.563573 1_1:+3207591 Msa0001520:three_prime_UTR
TGCCTAAATTGGGAATTGGA+CGG 0.566018 1_1:+3207470 Msa0001520:CDS
TGCCCTCGTCGACGGAGAGG+AGG 0.566136 1_1:-3206385 None:intergenic
TCCGTCGACGAGGGCATCAC+CGG 0.572273 1_1:+3206392 Msa0001520:CDS
TATGTTTAACAGCACCGTCT+CGG 0.572864 1_1:-3206651 None:intergenic
TCTCAAAGTCGTATCCTACA+AGG 0.578252 1_1:+3206472 Msa0001520:CDS
TTGTAGGATACGACTTTGAG+AGG 0.578638 1_1:-3206470 None:intergenic
AAGAAGAGAAGAGAATGGAA+GGG 0.579073 1_1:+3206105 Msa0001520:exon
GGATTTGTACGGTTGGACGA+TGG 0.580613 1_1:+3206493 Msa0001520:CDS
CGCGGACGACATAGCCGAGA+CGG 0.583581 1_1:+3206637 Msa0001520:CDS
GTATCCTACAAGGATTTGTA+CGG 0.586222 1_1:+3206482 Msa0001520:CDS
CGTCGGCAGGCACTGGATCG+AGG 0.590698 1_1:+3206572 Msa0001520:CDS
GTATGCTGTCATTATCATGC+TGG 0.590971 1_1:+3208695 Msa0001520:three_prime_UTR
TTGGTGGTCTATGAGTCAAA+AGG 0.591880 1_1:+3208968 Msa0001520:three_prime_UTR
CTGCTTGATGGATTGAATCG+AGG 0.595468 1_1:+3207445 Msa0001520:CDS
TGGAGAATAAATGCATTCAG+TGG 0.598543 1_1:-3206819 None:intergenic
TATTCTCCAAATGCTTATCG+TGG 0.598636 1_1:+3206833 Msa0001520:CDS
GGATAAGACGTAAGCAAGGA+CGG 0.599686 1_1:-3206324 None:intergenic
GTCGCCATCGGAGCTTCCGG+CGG 0.601734 1_1:+3206290 Msa0001520:CDS
CTTCCTCCTCTCCGTCGACG+AGG 0.602940 1_1:+3206382 Msa0001520:CDS
ATTCCTGAAAGCAGATAAAG+TGG 0.603419 1_1:+3206601 Msa0001520:CDS
AAGAAGGGGTTGGAGATGGG+TGG 0.606619 1_1:+3208530 Msa0001520:three_prime_UTR
CCTACAAGGATTTGTACGGT+TGG 0.611193 1_1:+3206486 Msa0001520:CDS
CGGAGAGGAGGAAGAGATGG+AGG 0.612018 1_1:-3206373 None:intergenic
ACTACCAAAATGCCTGAACA+GGG 0.612299 1_1:+3207024 Msa0001520:CDS
TGAAGAGCGATACTCCGATA+GGG 0.612895 1_1:+3206073 Msa0001520:five_prime_UTR
AAGCAACGAGAATCAATGAC+CGG 0.613092 1_1:+3208610 Msa0001520:three_prime_UTR
CTGTCATTATCATGCTGGAG+AGG 0.614755 1_1:+3208700 Msa0001520:three_prime_UTR
GGAATAGACTAGTTTCACAA+AGG 0.617909 1_1:+3208654 Msa0001520:three_prime_UTR
CCTTCTGTGGAGTATTCCGT+CGG 0.617984 1_1:+3206555 Msa0001520:CDS
AGATACAAATGCAACGAGAG+AGG 0.629581 1_1:-3209283 None:intergenic
CAGCCTCATATGCAGACCCA+GGG 0.630389 1_1:+3206954 Msa0001520:intron
AAGCAGATAAAGTGGTGACT+GGG 0.631961 1_1:+3206609 Msa0001520:CDS
ATCACCTTATAACATGATGT+GGG 0.635891 1_1:-3209113 None:intergenic
GTGAAGAGCGATACTCCGAT+AGG 0.638136 1_1:+3206072 Msa0001520:five_prime_UTR
CCGACGGAATACTCCACAGA+AGG 0.639941 1_1:-3206555 None:intergenic
AAGGAAGAAAATGAAAGCCA+TGG 0.643913 1_1:+3207514 Msa0001520:CDS
GCAGGCACTGGATCGAGGAG+CGG 0.649461 1_1:+3206577 Msa0001520:CDS
TGATGCCCTCGTCGACGGAG+AGG 0.650221 1_1:-3206388 None:intergenic
ATGATGTCGAGAATTGCCCT+GGG 0.658645 1_1:-3206970 None:intergenic
GTTTGGATAAGACGTAAGCA+AGG 0.664538 1_1:-3206328 None:intergenic
CGATGGCGACTCGGTCGCCG+CGG 0.670605 1_1:-3206277 None:intergenic
TCATGAAGACATGATAATGG+AGG 0.674615 1_1:+3208553 Msa0001520:three_prime_UTR
TCTCGACATCATCAAATCAG+GGG 0.678875 1_1:+3206981 Msa0001520:CDS
TGATGGATACATGAAAGAAG+GGG 0.681537 1_1:+3208516 Msa0001520:three_prime_UTR
AGCATTGAGAGCAAACAATG+TGG 0.682742 1_1:+3207544 Msa0001520:CDS
TATAACCGCCTCTTCAACCG+CGG 0.685462 1_1:+3206260 Msa0001520:CDS
GGAGGCCGTAATCGTGAACG+CGG 0.731405 1_1:-3206355 None:intergenic
CAGGGAATGTGTGAACGCTG+TGG 0.737088 1_1:+3207042 Msa0001520:CDS
CGGTTTCAAGAGAATCGTCG+CGG 0.750921 1_1:-3206418 None:intergenic
AGTGGTGACTGGGCACAACG+CGG 0.767399 1_1:+3206619 Msa0001520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTCAATATTTAAATTATT+TGG - chr1_1:3208368-3208387 None:intergenic 10.0%
!!! TGATATTATTATTTGTTTTT+AGG + chr1_1:3209191-3209210 Msa0001520:three_prime_UTR 10.0%
!!! GATATTATTATTTGTTTTTA+GGG + chr1_1:3209192-3209211 Msa0001520:three_prime_UTR 10.0%
!!! TAATATGAAACAAAGTTTTA+GGG - chr1_1:3207104-3207123 None:intergenic 15.0%
!!! ATAATATGAAACAAAGTTTT+AGG - chr1_1:3207105-3207124 None:intergenic 15.0%
!! CAAAAGAAAACAAAAAATAA+AGG - chr1_1:3207272-3207291 None:intergenic 15.0%
!!! ATATTTTTATAGCTAGAATT+TGG + chr1_1:3208633-3208652 Msa0001520:three_prime_UTR 15.0%
!! TAAAATTGAAATTATGAAGT+TGG + chr1_1:3209036-3209055 Msa0001520:three_prime_UTR 15.0%
!!! AATATTGAGTTGAAAATCAA+AGG - chr1_1:3207216-3207235 None:intergenic 20.0%
!! TGAAGAATCTATGAATAATT+TGG + chr1_1:3207998-3208017 Msa0001520:intron 20.0%
!!! TTTTTTTGTTTGTCAAGATT+TGG + chr1_1:3208034-3208053 Msa0001520:intron 20.0%
!! GGAATTCTAAATTAAAAAAC+TGG + chr1_1:3208305-3208324 Msa0001520:intron 20.0%
!!! ATTCTAGCTATAAAAATATC+CGG - chr1_1:3208632-3208651 None:intergenic 20.0%
!! TCCTTAAACTTAAAGTAAAA+GGG - chr1_1:3208858-3208877 None:intergenic 20.0%
!! ATCCTTAAACTTAAAGTAAA+AGG - chr1_1:3208859-3208878 None:intergenic 20.0%
!! TTTTCATAAGTGTACTTGAA+AGG - chr1_1:3206755-3206774 None:intergenic 25.0%
!! TTTCAAGTACACTTATGAAA+AGG + chr1_1:3206754-3206773 Msa0001520:CDS 25.0%
! AATTACAATACAACCAATTG+AGG - chr1_1:3207295-3207314 None:intergenic 25.0%
! AATTGGTTGTATTGTAATTC+AGG + chr1_1:3207296-3207315 Msa0001520:intron 25.0%
!!! TACTTTTTCATGTACAGAAA+TGG + chr1_1:3207407-3207426 Msa0001520:intron 25.0%
! CTAGAATATAGTTGCATTAT+TGG + chr1_1:3207744-3207763 Msa0001520:intron 25.0%
!!! CTAAAGTGTTTTCTAATCTA+GGG + chr1_1:3208485-3208504 Msa0001520:intron 25.0%
!! AAGTTTGGAGATTATGTTTT+CGG + chr1_1:3208786-3208805 Msa0001520:three_prime_UTR 25.0%
!!! TCCCTTTTACTTTAAGTTTA+AGG + chr1_1:3208854-3208873 Msa0001520:three_prime_UTR 25.0%
! GGTATTCAATTCAGTAATTA+TGG + chr1_1:3208989-3209008 Msa0001520:three_prime_UTR 25.0%
CTCAATCTGATTTCTATGAA+CGG - chr1_1:3206441-3206460 None:intergenic 30.0%
CATAGAAATCAGATTGAGTA+TGG + chr1_1:3206443-3206462 Msa0001520:CDS 30.0%
! GTGCTGTTAAACATATTAAG+AGG + chr1_1:3206659-3206678 Msa0001520:CDS 30.0%
!!! ATGAAACAAAGTTTTAGGGA+TGG - chr1_1:3207100-3207119 None:intergenic 30.0%
! TTGTTTTCTTTTGCCTCAAT+TGG + chr1_1:3207279-3207298 Msa0001520:intron 30.0%
! AGACTTCTGATTTTCTATGT+AGG + chr1_1:3207573-3207592 Msa0001520:exon 30.0%
AATATACATCAGTGAGATTC+AGG + chr1_1:3207628-3207647 Msa0001520:intron 30.0%
AATTCGTCAATACAACTCAA+CGG + chr1_1:3207867-3207886 Msa0001520:intron 30.0%
GTCAATCAGTTATATATGCT+TGG + chr1_1:3208081-3208100 Msa0001520:intron 30.0%
AACTGGAAGAAAAAAAAAGC+AGG + chr1_1:3208322-3208341 Msa0001520:intron 30.0%
ACTGGAAGAAAAAAAAAGCA+GGG + chr1_1:3208323-3208342 Msa0001520:intron 30.0%
AAGAAAAAAAAAGCAGGGAA+GGG + chr1_1:3208328-3208347 Msa0001520:intron 30.0%
AGAAAACACTTTAGCTAGTT+AGG - chr1_1:3208479-3208498 None:intergenic 30.0%
!! GCTAAAGTGTTTTCTAATCT+AGG + chr1_1:3208484-3208503 Msa0001520:intron 30.0%
TTCTTTCATGTATCCATCAT+AGG - chr1_1:3208515-3208534 None:intergenic 30.0%
!! TATGATGGATACATGAAAGA+AGG + chr1_1:3208514-3208533 Msa0001520:three_prime_UTR 30.0%
!! ATGATGGATACATGAAAGAA+GGG + chr1_1:3208515-3208534 Msa0001520:three_prime_UTR 30.0%
! CAGTTTTGCACAATTAATAC+AGG + chr1_1:3208829-3208848 Msa0001520:three_prime_UTR 30.0%
TGAAATTATGAAGTTGGCTA+AGG + chr1_1:3209042-3209061 Msa0001520:three_prime_UTR 30.0%
GAAATTATGAAGTTGGCTAA+GGG + chr1_1:3209043-3209062 Msa0001520:three_prime_UTR 30.0%
TAATCCCACATCATGTTATA+AGG + chr1_1:3209109-3209128 Msa0001520:three_prime_UTR 30.0%
ATCACCTTATAACATGATGT+GGG - chr1_1:3209116-3209135 None:intergenic 30.0%
!! TATAAGGTGATCGATTTTTG+TGG + chr1_1:3209125-3209144 Msa0001520:three_prime_UTR 30.0%
!!! TTTTTAGGGTTCTCTGTTTT+TGG + chr1_1:3209206-3209225 Msa0001520:three_prime_UTR 30.0%
!!! TTTTAGGGTTCTCTGTTTTT+GGG + chr1_1:3209207-3209226 Msa0001520:three_prime_UTR 30.0%
!!! TATTGTCTCCCCAATTTTTT+TGG + chr1_1:3209249-3209268 Msa0001520:three_prime_UTR 30.0%
!!! ATTGTCTCCCCAATTTTTTT+GGG + chr1_1:3209250-3209269 Msa0001520:three_prime_UTR 30.0%
AAACAGACCCCAAAAAAATT+GGG - chr1_1:3209261-3209280 None:intergenic 30.0%
TTCTTCTACCTAAACCCTAT+CGG - chr1_1:3206090-3206109 None:intergenic 35.0%
AAGAAGAGAAGAGAATGGAA+GGG + chr1_1:3206105-3206124 Msa0001520:exon 35.0%
! CAAATCTGTTGAAGGGTTTT+AGG - chr1_1:3206188-3206207 None:intergenic 35.0%
TTCTCTGCAAATCTGTTGAA+GGG - chr1_1:3206195-3206214 None:intergenic 35.0%
ATTCTCTGCAAATCTGTTGA+AGG - chr1_1:3206196-3206215 None:intergenic 35.0%
GTATCCTACAAGGATTTGTA+CGG + chr1_1:3206482-3206501 Msa0001520:CDS 35.0%
ATTCCTGAAAGCAGATAAAG+TGG + chr1_1:3206601-3206620 Msa0001520:CDS 35.0%
AGATGCAGTTCAATCATAAC+AGG + chr1_1:3206701-3206720 Msa0001520:CDS 35.0%
TCAATCATAACAGGTGAAGA+TGG + chr1_1:3206710-3206729 Msa0001520:CDS 35.0%
ACTTGAAAGGTTTGCATCTA+GGG - chr1_1:3206742-3206761 None:intergenic 35.0%
TACTTGAAAGGTTTGCATCT+AGG - chr1_1:3206743-3206762 None:intergenic 35.0%
TGGAGAATAAATGCATTCAG+TGG - chr1_1:3206822-3206841 None:intergenic 35.0%
TATTCTCCAAATGCTTATCG+TGG + chr1_1:3206833-3206852 Msa0001520:CDS 35.0%
ATTCTCGACATCATCAAATC+AGG + chr1_1:3206979-3206998 Msa0001520:CDS 35.0%
TTCTCGACATCATCAAATCA+GGG + chr1_1:3206980-3206999 Msa0001520:CDS 35.0%
!! CTGTGGTTATATTTCTAGTC+AGG + chr1_1:3207059-3207078 Msa0001520:CDS 35.0%
GTTGGGAATTGTTTATACAG+TGG - chr1_1:3207177-3207196 None:intergenic 35.0%
AAACAATTCCCAACATAAGC+AGG + chr1_1:3207183-3207202 Msa0001520:intron 35.0%
GAACCAAGAGTGAAATCAAA+GGG - chr1_1:3207359-3207378 None:intergenic 35.0%
TGAACCAAGAGTGAAATCAA+AGG - chr1_1:3207360-3207379 None:intergenic 35.0%
AATCGAGGTTTGCCTAAATT+GGG + chr1_1:3207460-3207479 Msa0001520:CDS 35.0%
! ATTTTCTTCCTTGCAACCAA+TGG - chr1_1:3207506-3207525 None:intergenic 35.0%
AAGGAAGAAAATGAAAGCCA+TGG + chr1_1:3207514-3207533 Msa0001520:CDS 35.0%
GTAGGCATCATATCATATGA+AGG + chr1_1:3207591-3207610 Msa0001520:three_prime_UTR 35.0%
TGACGAATTGTGAGTATAAC+AGG - chr1_1:3207856-3207875 None:intergenic 35.0%
AACTCAAGATGTATGTCTGA+AGG - chr1_1:3207931-3207950 None:intergenic 35.0%
AGCTATCAAGACTTTGTGAT+GGG + chr1_1:3208170-3208189 Msa0001520:intron 35.0%
! TTTGTGATGGGATACCAATA+AGG + chr1_1:3208182-3208201 Msa0001520:intron 35.0%
! TTGTGATGGGATACCAATAA+GGG + chr1_1:3208183-3208202 Msa0001520:intron 35.0%
AGCTTAACATTCACCCTTAT+TGG - chr1_1:3208199-3208218 None:intergenic 35.0%
GGGTTAATTGATTAATTCCC+CGG + chr1_1:3208270-3208289 Msa0001520:intron 35.0%
GAAGAAAAAAAAAGCAGGGA+AGG + chr1_1:3208327-3208346 Msa0001520:intron 35.0%
!! TCTCGTCATTTTGATAGAGT+TGG - chr1_1:3208409-3208428 None:intergenic 35.0%
CTGTGATGTGTTCAACTAAT+AGG - chr1_1:3208451-3208470 None:intergenic 35.0%
! TGATGGATACATGAAAGAAG+GGG + chr1_1:3208516-3208535 Msa0001520:three_prime_UTR 35.0%
TGGTCATGAAGACATGATAA+TGG + chr1_1:3208550-3208569 Msa0001520:three_prime_UTR 35.0%
!! TCATGAAGACATGATAATGG+AGG + chr1_1:3208553-3208572 Msa0001520:three_prime_UTR 35.0%
!! GGAATAGACTAGTTTCACAA+AGG + chr1_1:3208654-3208673 Msa0001520:three_prime_UTR 35.0%
TTTCACAAAGGAGAACCTAA+TGG + chr1_1:3208666-3208685 Msa0001520:three_prime_UTR 35.0%
ACAGCATACTTCAATCCATT+AGG - chr1_1:3208684-3208703 None:intergenic 35.0%
GTTCTCTTTATGCTCAAGTT+TGG + chr1_1:3208771-3208790 Msa0001520:three_prime_UTR 35.0%
! TTTGGAGATTATGTTTTCGG+TGG + chr1_1:3208789-3208808 Msa0001520:three_prime_UTR 35.0%
! TTGGAGATTATGTTTTCGGT+GGG + chr1_1:3208790-3208809 Msa0001520:three_prime_UTR 35.0%
CTTGCAGTTTGCAATTATCT+AGG + chr1_1:3208941-3208960 Msa0001520:three_prime_UTR 35.0%
TTGCAATTATCTAGGCTACT+TGG + chr1_1:3208949-3208968 Msa0001520:three_prime_UTR 35.0%
! GGATGTGCAGAAGATTTTTA+AGG + chr1_1:3209010-3209029 Msa0001520:three_prime_UTR 35.0%
GATCACCTTATAACATGATG+TGG - chr1_1:3209117-3209136 None:intergenic 35.0%
!! ATTTTTGTGGCAAGTTGGAA+GGG + chr1_1:3209138-3209157 Msa0001520:three_prime_UTR 35.0%
!!! TTTAGGGTTCTCTGTTTTTG+GGG + chr1_1:3209208-3209227 Msa0001520:three_prime_UTR 35.0%
!!! TTGTCTCCCCAATTTTTTTG+GGG + chr1_1:3209251-3209270 Msa0001520:three_prime_UTR 35.0%
AACAGACCCCAAAAAAATTG+GGG - chr1_1:3209260-3209279 None:intergenic 35.0%
CAAACAGACCCCAAAAAAAT+TGG - chr1_1:3209262-3209281 None:intergenic 35.0%
!!! CAATTTTTTTGGGGTCTGTT+TGG + chr1_1:3209260-3209279 Msa0001520:three_prime_UTR 35.0%
GCAGAAGACGTGTTAATATT+AGG - chr1_1:3209315-3209334 None:intergenic 35.0%
GGTAGAAGAAGAGAAGAGAA+TGG + chr1_1:3206100-3206119 Msa0001520:exon 40.0%
GAAGAAGAGAAGAGAATGGA+AGG + chr1_1:3206104-3206123 Msa0001520:exon 40.0%
GTTTGGATAAGACGTAAGCA+AGG - chr1_1:3206331-3206350 None:intergenic 40.0%
TTGTAGGATACGACTTTGAG+AGG - chr1_1:3206473-3206492 None:intergenic 40.0%
TCTCAAAGTCGTATCCTACA+AGG + chr1_1:3206472-3206491 Msa0001520:CDS 40.0%
AAGAACAATTGCACCTTCTG+TGG + chr1_1:3206542-3206561 Msa0001520:CDS 40.0%
TCACCACTTTATCTGCTTTC+AGG - chr1_1:3206607-3206626 None:intergenic 40.0%
AAAGCAGATAAAGTGGTGAC+TGG + chr1_1:3206608-3206627 Msa0001520:CDS 40.0%
AAGCAGATAAAGTGGTGACT+GGG + chr1_1:3206609-3206628 Msa0001520:CDS 40.0%
TATGTTTAACAGCACCGTCT+CGG - chr1_1:3206654-3206673 None:intergenic 40.0%
AAAGGTTTGCATCTAGGGAT+GGG - chr1_1:3206737-3206756 None:intergenic 40.0%
GCAAAACCACGATAAGCATT+TGG - chr1_1:3206842-3206861 None:intergenic 40.0%
! TTTTGCTCGTGAGTTCATCA+AGG + chr1_1:3206856-3206875 Msa0001520:CDS 40.0%
TCGTGAGTTCATCAAGGATT+TGG + chr1_1:3206862-3206881 Msa0001520:CDS 40.0%
TCAAGGATTTGGAGAGAATC+AGG + chr1_1:3206873-3206892 Msa0001520:CDS 40.0%
TCTCGACATCATCAAATCAG+GGG + chr1_1:3206981-3207000 Msa0001520:CDS 40.0%
ACTACCAAAATGCCTGAACA+GGG + chr1_1:3207024-3207043 Msa0001520:CDS 40.0%
GAATCGAAAGCAGCATTGTA+TGG - chr1_1:3207129-3207148 None:intergenic 40.0%
GACATAAGCCTGCTTATGTT+GGG - chr1_1:3207194-3207213 None:intergenic 40.0%
! TCTCCCTTTGATTTCACTCT+TGG + chr1_1:3207353-3207372 Msa0001520:intron 40.0%
AAAGCTTGTGTTCTGCTTGA+TGG + chr1_1:3207433-3207452 Msa0001520:CDS 40.0%
GAATCGAGGTTTGCCTAAAT+TGG + chr1_1:3207459-3207478 Msa0001520:CDS 40.0%
GGTTTGCCTAAATTGGGAAT+TGG + chr1_1:3207466-3207485 Msa0001520:CDS 40.0%
TGCCTAAATTGGGAATTGGA+CGG + chr1_1:3207470-3207489 Msa0001520:CDS 40.0%
TCTCAATGCTCTTTGTTCCA+TGG - chr1_1:3207534-3207553 None:intergenic 40.0%
! AGCATTGAGAGCAAACAATG+TGG + chr1_1:3207544-3207563 Msa0001520:CDS 40.0%
TTCCGTTCTTCTCTAGCAAT+GGG + chr1_1:3207969-3207988 Msa0001520:intron 40.0%
AACCCATTGCTAGAGAAGAA+CGG - chr1_1:3207974-3207993 None:intergenic 40.0%
GAGCTATCAAGACTTTGTGA+TGG + chr1_1:3208169-3208188 Msa0001520:intron 40.0%
! ACTGTGTTATTATTCGCAGC+AGG + chr1_1:3208246-3208265 Msa0001520:intron 40.0%
! CTGTGTTATTATTCGCAGCA+GGG + chr1_1:3208247-3208266 Msa0001520:intron 40.0%
! TGTGTTATTATTCGCAGCAG+GGG + chr1_1:3208248-3208267 Msa0001520:intron 40.0%
! AATTCCTCACATTGATTGCC+GGG - chr1_1:3208291-3208310 None:intergenic 40.0%
! GAATTCCTCACATTGATTGC+CGG - chr1_1:3208292-3208311 None:intergenic 40.0%
ATAGGAAGAGATAGCAGAGA+AGG - chr1_1:3208433-3208452 None:intergenic 40.0%
! AATCTAGGGCTTACCTATGA+TGG + chr1_1:3208499-3208518 Msa0001520:intron 40.0%
AAGCAACGAGAATCAATGAC+CGG + chr1_1:3208610-3208629 Msa0001520:three_prime_UTR 40.0%
GTATGCTGTCATTATCATGC+TGG + chr1_1:3208695-3208714 Msa0001520:three_prime_UTR 40.0%
CAATTATCTAGGCTACTTGG+TGG + chr1_1:3208952-3208971 Msa0001520:three_prime_UTR 40.0%
! TTGGTGGTCTATGAGTCAAA+AGG + chr1_1:3208968-3208987 Msa0001520:three_prime_UTR 40.0%
AGTTGGCTAAGGGAAAGATT+AGG + chr1_1:3209053-3209072 Msa0001520:three_prime_UTR 40.0%
!! GATCGATTTTTGTGGCAAGT+TGG + chr1_1:3209133-3209152 Msa0001520:three_prime_UTR 40.0%
!! GATTTTTGTGGCAAGTTGGA+AGG + chr1_1:3209137-3209156 Msa0001520:three_prime_UTR 40.0%
!!! TCTGTTTTTGGGGATGTTGT+GGG + chr1_1:3209218-3209237 Msa0001520:three_prime_UTR 40.0%
AGATACAAATGCAACGAGAG+AGG - chr1_1:3209286-3209305 None:intergenic 40.0%
TGAAGAGCGATACTCCGATA+GGG + chr1_1:3206073-3206092 Msa0001520:five_prime_UTR 45.0%
GGATAAGACGTAAGCAAGGA+CGG - chr1_1:3206327-3206346 None:intergenic 45.0%
CCAACCGTACAAATCCTTGT+AGG - chr1_1:3206489-3206508 None:intergenic 45.0%
CCTACAAGGATTTGTACGGT+TGG + chr1_1:3206486-3206505 Msa0001520:CDS 45.0%
GACGAGATCGTGAAACTGAT+CGG + chr1_1:3206515-3206534 Msa0001520:CDS 45.0%
GAAAGGTTTGCATCTAGGGA+TGG - chr1_1:3206738-3206757 None:intergenic 45.0%
ATGAGGCTGGCAGTAAGTAA+TGG - chr1_1:3206943-3206962 None:intergenic 45.0%
ATGATGTCGAGAATTGCCCT+GGG - chr1_1:3206973-3206992 None:intergenic 45.0%
!! CTGTTCAGGCATTTTGGTAG+TGG - chr1_1:3207025-3207044 None:intergenic 45.0%
CACTACCAAAATGCCTGAAC+AGG + chr1_1:3207023-3207042 Msa0001520:CDS 45.0%
! CATTCCCTGTTCAGGCATTT+TGG - chr1_1:3207031-3207050 None:intergenic 45.0%
GGACATAAGCCTGCTTATGT+TGG - chr1_1:3207195-3207214 None:intergenic 45.0%
!! CTGCTTGATGGATTGAATCG+AGG + chr1_1:3207445-3207464 Msa0001520:CDS 45.0%
CTCCGTCCAATTCCCAATTT+AGG - chr1_1:3207475-3207494 None:intergenic 45.0%
AATTGGGAATTGGACGGAGT+CGG + chr1_1:3207476-3207495 Msa0001520:CDS 45.0%
GTGAGATTCAGGTCAGTTAG+TGG + chr1_1:3207639-3207658 Msa0001520:intron 45.0%
ACAACTCAACGGTCTACTGT+AGG + chr1_1:3207878-3207897 Msa0001520:intron 45.0%
GTAGGATACACCTCAAGCAT+TGG + chr1_1:3207896-3207915 Msa0001520:intron 45.0%
!! ATACACCTCAAGCATTGGCT+TGG + chr1_1:3207901-3207920 Msa0001520:intron 45.0%
GATATCCAAGCCAATGCTTG+AGG - chr1_1:3207909-3207928 None:intergenic 45.0%
CTTCCGTTCTTCTCTAGCAA+TGG + chr1_1:3207968-3207987 Msa0001520:intron 45.0%
! GTGTTATTATTCGCAGCAGG+GGG + chr1_1:3208249-3208268 Msa0001520:intron 45.0%
TGTTATTATTCGCAGCAGGG+GGG + chr1_1:3208250-3208269 Msa0001520:intron 45.0%
! ATTCCTCACATTGATTGCCG+GGG - chr1_1:3208290-3208309 None:intergenic 45.0%
GGATACATGAAAGAAGGGGT+TGG + chr1_1:3208520-3208539 Msa0001520:three_prime_UTR 45.0%
ATGAAAGAAGGGGTTGGAGA+TGG + chr1_1:3208526-3208545 Msa0001520:three_prime_UTR 45.0%
TGAAAGAAGGGGTTGGAGAT+GGG + chr1_1:3208527-3208546 Msa0001520:three_prime_UTR 45.0%
CTGTCATTATCATGCTGGAG+AGG + chr1_1:3208700-3208719 Msa0001520:three_prime_UTR 45.0%
TTATCATGCTGGAGAGGTTC+TGG + chr1_1:3208706-3208725 Msa0001520:three_prime_UTR 45.0%
TATCATGCTGGAGAGGTTCT+GGG + chr1_1:3208707-3208726 Msa0001520:three_prime_UTR 45.0%
TGTCAGGGAGTAGAGTCTTT+CGG + chr1_1:3208730-3208749 Msa0001520:three_prime_UTR 45.0%
! GAGATTATGTTTTCGGTGGG+TGG + chr1_1:3208793-3208812 Msa0001520:three_prime_UTR 45.0%
! TTATGTTTTCGGTGGGTGGT+TGG + chr1_1:3208797-3208816 Msa0001520:three_prime_UTR 45.0%
! TATGTTTTCGGTGGGTGGTT+GGG + chr1_1:3208798-3208817 Msa0001520:three_prime_UTR 45.0%
TGGCTAAGGGAAAGATTAGG+TGG + chr1_1:3209056-3209075 Msa0001520:three_prime_UTR 45.0%
!!! CTCTGTTTTTGGGGATGTTG+TGG + chr1_1:3209217-3209236 Msa0001520:three_prime_UTR 45.0%
GTGAAGAGCGATACTCCGAT+AGG + chr1_1:3206072-3206091 Msa0001520:five_prime_UTR 50.0%
GCGATACTCCGATAGGGTTT+AGG + chr1_1:3206079-3206098 Msa0001520:five_prime_UTR 50.0%
TATAACCGCCTCTTCAACCG+CGG + chr1_1:3206260-3206279 Msa0001520:CDS 50.0%
ATCGTGAACGCGGTTGAGTT+TGG - chr1_1:3206348-3206367 None:intergenic 50.0%
CTCAACCGCGTTCACGATTA+CGG + chr1_1:3206350-3206369 Msa0001520:CDS 50.0%
CGGTTTCAAGAGAATCGTCG+CGG - chr1_1:3206421-3206440 None:intergenic 50.0%
GGATTTGTACGGTTGGACGA+TGG + chr1_1:3206493-3206512 Msa0001520:CDS 50.0%
! CCTTCTGTGGAGTATTCCGT+CGG + chr1_1:3206555-3206574 Msa0001520:CDS 50.0%
GATGATGTCGAGAATTGCCC+TGG - chr1_1:3206974-3206993 None:intergenic 50.0%
CGTTCACACATTCCCTGTTC+AGG - chr1_1:3207039-3207058 None:intergenic 50.0%
ATTGGGAATTGGACGGAGTC+GGG + chr1_1:3207477-3207496 Msa0001520:CDS 50.0%
ATTCCCCGGCAATCAATGTG+AGG + chr1_1:3208284-3208303 Msa0001520:intron 50.0%
!! GTTTTTGGGGATGTTGTGGG+TGG + chr1_1:3209221-3209240 Msa0001520:three_prime_UTR 50.0%
AAGAGAATCGTCGCGGTAGC+CGG - chr1_1:3206414-3206433 None:intergenic 55.0%
CCGACGGAATACTCCACAGA+AGG - chr1_1:3206558-3206577 None:intergenic 55.0%
CAGCCTCATATGCAGACCCA+GGG + chr1_1:3206954-3206973 Msa0001520:intron 55.0%
TTGCCCTGGGTCTGCATATG+AGG - chr1_1:3206960-3206979 None:intergenic 55.0%
CAGGGAATGTGTGAACGCTG+TGG + chr1_1:3207042-3207061 Msa0001520:CDS 55.0%
! TCGGGTTGCCATTGGTTGCA+AGG + chr1_1:3207495-3207514 Msa0001520:CDS 55.0%
AAGAAGGGGTTGGAGATGGG+TGG + chr1_1:3208530-3208549 Msa0001520:three_prime_UTR 55.0%
!! TGGAGAGGTTCTGGGTGTCA+GGG + chr1_1:3208715-3208734 Msa0001520:three_prime_UTR 55.0%
GACGGTTGAGTCTTTGCCGC+CGG - chr1_1:3206309-3206328 None:intergenic 60.0%
GGAGGCCGTAATCGTGAACG+CGG - chr1_1:3206358-3206377 None:intergenic 60.0%
CGGAGAGGAGGAAGAGATGG+AGG - chr1_1:3206376-3206395 None:intergenic 60.0%
CGACGGAGAGGAGGAAGAGA+TGG - chr1_1:3206379-3206398 None:intergenic 60.0%
TTCCTCCTCTCCGTCGACGA+GGG + chr1_1:3206383-3206402 Msa0001520:CDS 60.0%
! CTGTGGAGTATTCCGTCGGC+AGG + chr1_1:3206559-3206578 Msa0001520:CDS 60.0%
AGTATTCCGTCGGCAGGCAC+TGG + chr1_1:3206565-3206584 Msa0001520:CDS 60.0%
AGTGGTGACTGGGCACAACG+CGG + chr1_1:3206619-3206638 Msa0001520:CDS 60.0%
CCTGGGTCTGCATATGAGGC+TGG - chr1_1:3206956-3206975 None:intergenic 60.0%
CCAGCCTCATATGCAGACCC+AGG + chr1_1:3206953-3206972 Msa0001520:intron 60.0%
!! CTGGAGAGGTTCTGGGTGTC+AGG + chr1_1:3208714-3208733 Msa0001520:three_prime_UTR 60.0%
CGGAAGCTCCGATGGCGACT+CGG - chr1_1:3206289-3206308 None:intergenic 65.0%
CGAGTCGCCATCGGAGCTTC+CGG + chr1_1:3206287-3206306 Msa0001520:CDS 65.0%
TTTGCCGCCGGAAGCTCCGA+TGG - chr1_1:3206297-3206316 None:intergenic 65.0%
CTTCCTCCTCTCCGTCGACG+AGG + chr1_1:3206382-3206401 Msa0001520:CDS 65.0%
TGATGCCCTCGTCGACGGAG+AGG - chr1_1:3206391-3206410 None:intergenic 65.0%
!! TCCGTCGACGAGGGCATCAC+CGG + chr1_1:3206392-3206411 Msa0001520:CDS 65.0%
CTCGATCCAGTGCCTGCCGA+CGG - chr1_1:3206574-3206593 None:intergenic 65.0%
!! GCAGGCACTGGATCGAGGAG+CGG + chr1_1:3206577-3206596 Msa0001520:CDS 65.0%
CGCGGACGACATAGCCGAGA+CGG + chr1_1:3206637-3206656 Msa0001520:CDS 65.0%
! GGACGGAGTCGGGTTGCCAT+TGG + chr1_1:3207487-3207506 Msa0001520:CDS 65.0%
GGTCGCCGCGGTTGAAGAGG+CGG - chr1_1:3206268-3206287 None:intergenic 70.0%
CTCGGTCGCCGCGGTTGAAG+AGG - chr1_1:3206271-3206290 None:intergenic 70.0%
GTCGCCATCGGAGCTTCCGG+CGG + chr1_1:3206290-3206309 Msa0001520:CDS 70.0%
TGCCCTCGTCGACGGAGAGG+AGG - chr1_1:3206388-3206407 None:intergenic 70.0%
GCCGGTGATGCCCTCGTCGA+CGG - chr1_1:3206396-3206415 None:intergenic 70.0%
!! CGTCGGCAGGCACTGGATCG+AGG + chr1_1:3206572-3206591 Msa0001520:CDS 70.0%
!! CGATGGCGACTCGGTCGCCG+CGG - chr1_1:3206280-3206299 None:intergenic 75.0%
CGCGGCGACCGAGTCGCCAT+CGG + chr1_1:3206278-3206297 Msa0001520:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 3206042 3209363 3206042 ID=Msa0001520;Name=Msa0001520
chr1_1 mRNA 3206042 3209363 3206042 ID=Msa0001520-mRNA-1;Parent=Msa0001520;Name=Msa0001520-mRNA-1;_AED=0.16;_eAED=0.16;_QI=77|1|1|1|0.66|0.5|4|888|348
chr1_1 exon 3206042 3206894 3206042 ID=Msa0001520-mRNA-1:exon:859;Parent=Msa0001520-mRNA-1
chr1_1 exon 3206969 3207080 3206969 ID=Msa0001520-mRNA-1:exon:860;Parent=Msa0001520-mRNA-1
chr1_1 exon 3207424 3207612 3207424 ID=Msa0001520-mRNA-1:exon:861;Parent=Msa0001520-mRNA-1
chr1_1 exon 3208506 3209363 3208506 ID=Msa0001520-mRNA-1:exon:862;Parent=Msa0001520-mRNA-1
chr1_1 five_prime_UTR 3206042 3206118 3206042 ID=Msa0001520-mRNA-1:five_prime_utr;Parent=Msa0001520-mRNA-1
chr1_1 CDS 3206119 3206894 3206119 ID=Msa0001520-mRNA-1:cds;Parent=Msa0001520-mRNA-1
chr1_1 CDS 3206969 3207080 3206969 ID=Msa0001520-mRNA-1:cds;Parent=Msa0001520-mRNA-1
chr1_1 CDS 3207424 3207582 3207424 ID=Msa0001520-mRNA-1:cds;Parent=Msa0001520-mRNA-1
chr1_1 three_prime_UTR 3207583 3207612 3207583 ID=Msa0001520-mRNA-1:three_prime_utr;Parent=Msa0001520-mRNA-1
chr1_1 three_prime_UTR 3208506 3209363 3208506 ID=Msa0001520-mRNA-1:three_prime_utr;Parent=Msa0001520-mRNA-1
Gene Sequence

>Msa0001520

ATGGAAGGGAAGAGAAGCGTGCGTATGTGCTGTTTATGCAATGAAAGAAGAGCTTCTCTCAAGAGACCTAAAACCCTTCAACAGATTTGCAGAGAATGTTTCTATCTTGCTTTCGAAGATGAGATTCATCAACTCATCGTCTATAACCGCCTCTTCAACCGCGGCGACCGAGTCGCCATCGGAGCTTCCGGCGGCAAAGACTCAACCGTCCTTGCTTACGTCTTATCCAAACTCAACCGCGTTCACGATTACGGCCTCCATCTCTTCCTCCTCTCCGTCGACGAGGGCATCACCGGCTACCGCGACGATTCTCTTGAAACCGTTCATAGAAATCAGATTGAGTATGGATTGCCTCTCAAAGTCGTATCCTACAAGGATTTGTACGGTTGGACGATGGACGAGATCGTGAAACTGATCGGTCTGAAGAACAATTGCACCTTCTGTGGAGTATTCCGTCGGCAGGCACTGGATCGAGGAGCGGCATTCCTGAAAGCAGATAAAGTGGTGACTGGGCACAACGCGGACGACATAGCCGAGACGGTGCTGTTAAACATATTAAGAGGAGATATAGCTAGATTGAGTAGATGCAGTTCAATCATAACAGGTGAAGATGGACCCATCCCTAGATGCAAACCTTTCAAGTACACTTATGAAAAGGAAATTGTTATGTATGCTTATTTCAAGAAGCTTGACTACTTTTCCACTGAATGCATTTATTCTCCAAATGCTTATCGTGGTTTTGCTCGTGAGTTCATCAAGGATTTGGAGAGAATCAGACCCAGGGCAATTCTCGACATCATCAAATCAGGGGAGAATTTTAGAATTTCTACCACTACCAAAATGCCTGAACAGGGAATGTGTGAACGCTGTGGTTATATTTCTAGTCAGAAATGGTGTAAAGCTTGTGTTCTGCTTGATGGATTGAATCGAGGTTTGCCTAAATTGGGAATTGGACGGAGTCGGGTTGCCATTGGTTGCAAGGAAGAAAATGAAAGCCATGGAACAAAGAGCATTGAGAGCAAACAATGTGGATCTTTAGACTTCTGA
Protein sequence

>Msa0001520

MEGKRSVRMCCLCNERRASLKRPKTLQQICRECFYLAFEDEIHQLIVYNRLFNRGDRVAIGASGGKDSTVLAYVLSKLNRVHDYGLHLFLLSVDEGITGYRDDSLETVHRNQIEYGLPLKVVSYKDLYGWTMDEIVKLIGLKNNCTFCGVFRRQALDRGAAFLKADKVVTGHNADDIAETVLLNILRGDIARLSRCSSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGENFRISTTTKMPEQGMCERCGYISSQKWCKACVLLDGLNRGLPKLGIGRSRVAIGCKEENESHGTKSIESKQCGSLDF*