AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0922090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0922090 MtrunA17_Chr6g0479311 84.266 572 24 2 1 551 1 527 0.0 937
Msa0922090 MtrunA17_Chr8g0340881 32.549 510 295 13 4 467 9 515 3.04e-68 236
Msa0922090 MtrunA17_Chr8g0340941 31.942 479 287 12 1 443 1 476 5.51e-66 223
Msa0922090 MtrunA17_Chr8g0340931 31.405 484 283 14 4 443 3 481 1.83e-64 226
Msa0922090 MtrunA17_Chr8g0341151 30.146 481 292 11 1 443 2 476 1.22e-63 223
Msa0922090 MtrunA17_Chr8g0341231 32.244 459 267 14 26 443 51 506 1.79e-63 218
Msa0922090 MtrunA17_Chr8g0340871 31.656 477 285 13 4 443 14 486 6.64e-63 221
Msa0922090 MtrunA17_Chr8g0341011 32.671 453 266 12 26 443 34 482 9.80e-63 221
Msa0922090 MtrunA17_Chr8g0340911 31.799 478 289 11 1 443 6 481 4.61e-62 219
Msa0922090 MtrunA17_Chr8g0347661 29.959 484 297 13 1 443 6 488 6.85e-61 216
Msa0922090 MtrunA17_Chr8g0340891 30.498 482 289 14 1 443 6 480 4.93e-60 213
Msa0922090 MtrunA17_Chr8g0341061 33.264 478 253 18 26 443 60 531 5.35e-60 211
Msa0922090 MtrunA17_Chr6g0487571 31.743 482 279 16 7 443 8 484 2.80e-58 208
Msa0922090 MtrunA17_Chr1g0205741 31.470 483 262 18 29 452 28 500 6.36e-58 201
Msa0922090 MtrunA17_Chr2g0330591 29.412 476 291 14 5 441 8 477 7.89e-56 201
Msa0922090 MtrunA17_Chr8g0341091 30.101 495 280 16 26 456 56 548 1.26e-55 197
Msa0922090 MtrunA17_Chr7g0263591 30.103 485 270 19 26 456 33 502 1.62e-54 198
Msa0922090 MtrunA17_Chr8g0358831 30.388 464 263 15 1 443 24 448 1.73e-53 194
Msa0922090 MtrunA17_Chr8g0341101 30.591 474 269 14 26 440 59 531 1.82e-51 189
Msa0922090 MtrunA17_Chr1g0181731 29.019 479 285 18 26 456 27 498 1.27e-50 187
Msa0922090 MtrunA17_Chr8g0341141 28.660 485 278 14 1 443 1 459 7.20e-50 179
Msa0922090 MtrunA17_Chr3g0123141 27.525 505 281 19 16 445 15 509 2.96e-43 165
Msa0922090 MtrunA17_Chr8g0341351 30.882 340 202 9 26 333 44 382 9.08e-38 144
Msa0922090 MtrunA17_Chr6g0487561 31.564 358 199 15 4 321 17 368 4.06e-37 141
Msa0922090 MtrunA17_Chr7g0236881 27.076 554 304 21 7 481 10 542 2.22e-33 135
Msa0922090 MtrunA17_Chr8g0341271 31.293 294 177 7 63 333 3 294 5.42e-32 125
Msa0922090 MtrunA17_Chr2g0282601 28.767 511 299 23 4 457 6 508 7.03e-29 121
Msa0922090 MtrunA17_Chr8g0341111 39.881 168 91 5 299 456 240 407 3.80e-28 119
Msa0922090 MtrunA17_Chr8g0341111 33.721 172 92 7 26 183 56 219 1.05e-16 83.6
Msa0922090 MtrunA17_Chr4g0044931 37.912 182 102 6 29 200 7 187 2.06e-27 109
Msa0922090 MtrunA17_Chr8g0340961 29.132 357 191 12 1 319 1 333 6.14e-27 111
Msa0922090 MtrunA17_Chr5g0423871 37.762 143 87 2 303 443 16 158 7.04e-22 94.0
Msa0922090 MtrunA17_Chr5g0423881 28.614 339 192 15 27 321 64 396 2.40e-21 96.7
Msa0922090 MtrunA17_Chr5g0411631 22.756 479 284 18 4 438 13 449 2.21e-19 92.4
Msa0922090 MtrunA17_Chr2g0330611 31.844 179 111 6 5 173 8 185 2.79e-18 84.3
Msa0922090 MtrunA17_Chr8g0341261 33.594 128 67 3 334 443 19 146 1.45e-17 80.5
Msa0922090 MtrunA17_Chr1g0198681 26.166 493 283 24 29 456 40 516 3.61e-17 85.1
Msa0922090 MtrunA17_Chr8g0341201 41.322 121 64 4 93 210 24 140 1.82e-16 77.4
Msa0922090 MtrunA17_Chr5g0422481 24.381 525 280 21 9 456 17 501 2.48e-16 82.4
Msa0922090 MtrunA17_Chr4g0044941 25.725 276 156 7 196 425 9 281 4.21e-16 79.0
Msa0922090 MtrunA17_Chr1g0165161 34.932 146 81 6 322 457 19 160 5.71e-15 73.9
Msa0922090 MtrunA17_Chr7g0220741 32.468 231 132 10 333 547 36 258 1.46e-13 73.6
Msa0922090 MtrunA17_Chr2g0330621 27.179 195 111 8 234 402 14 203 1.55e-13 69.7
Msa0922090 MtrunA17_Chr1g0165281 34.437 151 82 7 318 456 52 197 7.15e-13 71.6
Msa0922090 MtrunA17_Chr1g0165241 34.437 151 82 7 318 456 52 197 7.15e-13 71.6
Msa0922090 MtrunA17_Chr1g0165311 34.437 151 82 7 318 456 52 197 7.15e-13 71.6
Msa0922090 MtrunA17_Chr4g0073471 39.583 144 68 7 325 456 19 155 1.52e-12 70.5
Msa0922090 MtrunA17_Chr1g0165921 36.184 152 78 8 318 456 10 155 5.95e-12 68.6
Msa0922090 MtrunA17_Chr5g0413291 41.463 123 59 5 346 462 51 166 7.37e-12 68.2
Msa0922090 MtrunA17_Chr1g0165271 28.571 196 120 7 318 502 21 207 8.85e-12 67.0
Msa0922090 MtrunA17_Chr1g0165191 33.333 135 74 6 318 442 19 147 1.27e-11 67.8
Msa0922090 MtrunA17_Chr7g0222841 33.333 153 64 6 322 442 29 175 1.79e-11 63.9
Msa0922090 MtrunA17_Chr1g0165231 28.718 195 119 7 318 501 21 206 1.80e-11 67.4
Msa0922090 MtrunA17_Chr1g0165301 28.718 195 119 7 318 501 21 206 1.80e-11 67.4
Msa0922090 MtrunA17_Chr1g0165971 33.333 135 75 6 318 442 19 148 2.60e-11 66.6
Msa0922090 MtrunA17_Chr1g0165221 34.437 151 83 8 318 457 20 165 4.45e-11 65.9
Msa0922090 MtrunA17_Chr1g0165211 31.788 151 85 6 318 457 17 160 4.74e-11 65.9
Msa0922090 MtrunA17_Chr8g0345471 34.722 144 72 8 308 440 2 134 4.97e-11 65.5
Msa0922090 MtrunA17_Chr2g0334251 36.296 135 72 5 313 437 21 151 5.88e-11 65.5
Msa0922090 MtrunA17_Chr1g0165881 35.075 134 72 7 333 456 38 166 8.64e-11 62.0
Msa0922090 MtrunA17_Chr6g0456231 38.053 113 61 4 333 440 34 142 9.09e-11 64.7
Msa0922090 MtrunA17_Chr5g0396941 38.000 100 56 4 361 456 58 155 9.76e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0922090 AT5G59680.1 33.405 467 254 19 26 446 29 484 3.52e-64 225
Msa0922090 AT4G29990.2 32.988 482 274 20 4 443 6 480 5.14e-63 220
Msa0922090 AT4G29990.1 32.780 482 275 20 4 443 6 480 2.74e-62 220
Msa0922090 AT1G51800.1 31.042 480 285 16 4 444 8 480 9.02e-60 213
Msa0922090 AT3G19230.1 32.558 473 259 12 29 444 25 494 2.56e-59 206
Msa0922090 AT2G19210.1 32.927 492 271 21 3 445 8 489 7.19e-59 210
Msa0922090 AT5G59670.2 31.453 461 272 12 26 446 28 484 1.04e-58 210
Msa0922090 AT5G59670.1 31.453 461 272 12 26 446 28 484 1.04e-58 210
Msa0922090 AT3G46280.1 36.261 353 180 10 9 323 5 350 1.21e-57 200
Msa0922090 AT1G05700.1 31.656 477 275 17 7 443 15 480 5.84e-57 205
Msa0922090 AT1G05700.2 31.656 477 275 17 7 443 15 480 1.01e-56 204
Msa0922090 AT1G07550.1 29.806 463 276 15 26 446 29 484 1.80e-56 203
Msa0922090 AT2G29000.1 30.672 476 283 15 26 460 30 499 2.69e-56 203
Msa0922090 AT1G51790.3 30.769 481 285 16 5 443 9 483 5.26e-56 202
Msa0922090 AT1G51790.1 30.769 481 285 16 5 443 9 483 5.26e-56 202
Msa0922090 AT1G51790.2 30.769 481 285 16 5 443 9 483 5.35e-56 202
Msa0922090 AT3G05990.1 30.737 475 264 15 29 443 30 499 5.44e-56 196
Msa0922090 AT2G19190.1 30.247 486 287 15 1 440 3 482 3.43e-55 200
Msa0922090 AT3G46400.1 31.115 511 293 17 1 461 1 502 3.75e-55 200
Msa0922090 AT4G20450.2 31.864 499 274 20 5 442 7 500 7.39e-55 199
Msa0922090 AT1G24485.4 36.888 347 181 10 3 321 10 346 7.71e-55 191
Msa0922090 AT4G20450.1 31.864 499 274 20 5 442 7 500 8.06e-55 199
Msa0922090 AT1G24485.1 36.888 347 181 10 3 321 10 346 1.64e-54 191
Msa0922090 AT2G14510.1 28.601 486 302 16 1 444 1 483 1.87e-54 198
Msa0922090 AT2G14510.2 28.601 486 302 16 1 444 9 491 2.40e-54 197
Msa0922090 AT1G24485.2 36.888 347 181 10 3 321 10 346 2.62e-54 191
Msa0922090 AT3G21340.2 31.155 459 271 14 26 444 33 486 6.11e-54 194
Msa0922090 AT2G14440.1 28.512 484 302 14 2 444 4 484 6.67e-54 196
Msa0922090 AT2G28960.2 31.006 487 280 18 2 444 6 480 6.69e-54 196
Msa0922090 AT3G46330.1 29.806 463 276 14 26 446 31 486 1.18e-53 196
Msa0922090 AT2G19230.2 29.046 482 295 13 4 443 9 485 3.61e-53 194
Msa0922090 AT5G59650.1 31.092 476 277 15 26 456 29 498 3.73e-53 194
Msa0922090 AT3G46340.1 29.225 503 301 17 3 456 6 502 4.03e-53 194
Msa0922090 AT1G24485.3 36.888 347 181 10 3 321 10 346 4.66e-53 190
Msa0922090 AT1G51880.2 30.204 490 287 17 1 443 19 500 5.63e-53 194
Msa0922090 AT3G21340.1 31.155 459 271 14 26 444 33 486 6.45e-53 194
Msa0922090 AT1G51880.1 30.204 490 287 17 1 443 1 482 6.82e-53 193
Msa0922090 AT2G19230.1 29.339 484 291 14 4 443 9 485 8.10e-53 194
Msa0922090 AT3G46420.1 30.502 518 294 18 1 463 1 507 1.25e-52 192
Msa0922090 AT1G51805.1 29.140 477 289 16 6 444 10 475 1.28e-52 192
Msa0922090 AT5G16900.2 28.628 503 291 18 26 472 24 514 1.67e-52 189
Msa0922090 AT3G46270.2 33.521 355 194 9 4 323 17 364 2.86e-52 186
Msa0922090 AT3G46270.1 33.521 355 194 9 4 323 9 356 3.77e-52 185
Msa0922090 AT1G51850.2 29.707 478 284 15 6 444 10 474 5.42e-52 191
Msa0922090 AT5G16900.1 28.628 503 291 18 26 472 24 514 2.41e-51 189
Msa0922090 AT5G16900.3 28.628 503 291 18 26 472 24 514 2.41e-51 189
Msa0922090 AT2G37050.2 29.583 480 281 18 26 456 28 499 1.01e-50 186
Msa0922090 AT2G37050.4 29.583 480 281 18 26 456 28 499 1.06e-50 186
Msa0922090 AT2G28990.2 29.185 466 274 16 26 446 25 479 1.24e-50 187
Msa0922090 AT2G28990.1 29.185 466 274 16 26 446 25 479 1.24e-50 187
Msa0922090 AT1G51880.3 29.719 498 287 18 1 443 19 508 2.35e-50 186
Msa0922090 AT2G37050.3 29.814 483 276 19 26 456 28 499 4.95e-50 186
Msa0922090 AT2G37050.1 29.814 483 276 19 26 456 28 499 5.17e-50 185
Msa0922090 AT2G04300.2 30.178 507 289 18 4 456 9 504 1.16e-49 184
Msa0922090 AT5G59650.2 30.372 484 278 16 26 456 29 506 1.34e-49 184
Msa0922090 AT1G07560.1 29.741 464 270 15 26 443 30 483 1.48e-49 184
Msa0922090 AT1G51860.1 29.474 475 284 16 1 430 1 469 2.12e-49 183
Msa0922090 AT1G49100.1 28.807 486 292 17 4 444 9 485 2.48e-48 180
Msa0922090 AT1G67720.1 28.653 527 291 19 1 452 1 517 6.47e-48 179
Msa0922090 AT3G46370.2 30.047 426 249 14 79 461 2 421 8.94e-48 178
Msa0922090 AT3G46370.1 30.047 426 249 14 79 461 2 421 8.94e-48 178
Msa0922090 AT1G51820.1 29.019 479 289 16 8 444 5 474 2.02e-47 177
Msa0922090 AT1G51870.2 28.626 524 313 20 1 476 1 511 2.83e-47 177
Msa0922090 AT1G51805.2 27.883 477 271 16 6 444 10 451 1.42e-46 175
Msa0922090 AT1G51850.1 28.452 478 270 15 6 444 10 454 3.17e-46 174
Msa0922090 AT2G04300.1 29.752 484 280 16 4 456 9 463 6.10e-46 173
Msa0922090 AT4G29180.2 29.960 504 301 16 1 455 1 501 3.34e-45 171
Msa0922090 AT4G29180.3 29.960 504 301 16 1 455 1 501 3.41e-45 171
Msa0922090 AT3G46260.1 33.533 334 179 10 27 323 29 356 4.00e-45 165
Msa0922090 AT1G51890.3 28.893 488 292 17 4 446 3 480 6.97e-45 169
Msa0922090 AT1G51890.1 28.717 491 295 17 4 449 3 483 1.16e-44 169
Msa0922090 AT3G46330.2 29.099 433 258 14 26 416 31 456 1.17e-44 169
Msa0922090 AT1G51890.2 28.717 491 295 17 4 449 3 483 1.30e-44 169
Msa0922090 AT4G29450.1 28.180 511 315 13 1 463 1 507 2.60e-43 166
Msa0922090 AT1G51910.1 29.555 494 286 19 1 443 1 483 3.48e-43 165
Msa0922090 AT4G29180.1 29.470 509 295 17 1 455 1 499 1.57e-40 157
Msa0922090 AT3G46240.1 33.233 331 163 11 27 329 6 306 3.02e-40 151
Msa0922090 AT5G59660.2 29.648 398 241 11 70 455 41 411 1.73e-37 148
Msa0922090 AT1G51870.1 27.902 448 268 18 1 401 1 440 6.00e-37 146
Msa0922090 AT5G48740.1 31.352 488 279 25 4 456 1 467 6.85e-37 146
Msa0922090 AT2G28960.1 30.548 347 196 13 133 444 12 348 5.75e-34 137
Msa0922090 AT5G59660.3 26.526 475 275 14 1 455 16 436 1.39e-31 130
Msa0922090 AT2G28970.2 28.448 348 202 12 135 446 11 347 2.69e-30 126
Msa0922090 AT5G59660.1 26.316 475 273 15 1 455 16 433 5.70e-30 125
Msa0922090 AT1G51860.2 28.875 329 197 11 134 430 2 325 7.20e-29 122
Msa0922090 AT5G16900.4 28.483 323 174 13 197 472 16 328 9.70e-29 121
Msa0922090 AT1G51810.1 26.611 357 222 12 121 445 2 350 1.39e-28 121
Msa0922090 AT1G28340.1 29.299 471 266 25 27 440 29 489 6.02e-28 118
Msa0922090 AT2G28970.1 29.371 286 159 9 196 446 105 382 6.38e-27 116
Msa0922090 AT3G46350.1 30.418 263 163 9 26 274 30 286 4.15e-25 108
Msa0922090 AT1G51830.1 28.470 281 170 8 193 444 7 285 6.99e-24 106
Msa0922090 AT1G51830.2 28.470 281 170 8 193 444 14 292 7.28e-24 106
Msa0922090 AT1G51890.4 25.051 487 248 19 4 446 3 416 3.79e-23 104
Msa0922090 AT1G51820.2 36.364 143 86 3 307 444 70 212 1.69e-20 95.9
Msa0922090 AT1G51840.2 31.319 182 113 4 1 174 8 185 1.14e-18 85.1
Msa0922090 AT1G51840.5 31.319 182 113 4 1 174 8 185 1.14e-18 85.1
Msa0922090 AT1G51840.4 31.319 182 113 4 1 174 8 185 1.14e-18 85.1
Msa0922090 AT1G51840.3 31.319 182 113 4 1 174 8 185 1.14e-18 85.1
Msa0922090 AT1G51840.1 31.319 182 113 4 1 174 8 185 1.14e-18 85.1
Msa0922090 AT1G51890.5 33.333 150 93 5 306 449 63 211 6.87e-17 84.3
Msa0922090 AT1G25570.1 24.294 531 279 24 29 461 32 537 2.78e-16 82.4
Msa0922090 AT5G59616.1 29.167 144 74 5 263 378 10 153 1.13e-13 69.3
Msa0922090 AT5G63710.2 39.706 136 62 8 333 456 16 143 3.04e-13 72.8
Msa0922090 AT5G63710.4 39.706 136 62 8 333 456 16 143 3.04e-13 72.8
Msa0922090 AT5G63710.1 39.706 136 62 8 333 456 51 178 3.53e-13 72.8
Msa0922090 AT5G63710.3 39.706 136 62 8 333 456 52 179 3.57e-13 72.8
Msa0922090 AT3G08680.1 34.694 147 85 4 318 456 9 152 4.50e-13 72.4
Msa0922090 AT3G08680.2 34.694 147 85 4 318 456 9 152 4.50e-13 72.4
Msa0922090 AT5G65700.1 38.621 145 79 5 321 456 13 156 1.87e-12 70.9
Msa0922090 AT5G65700.2 38.621 145 79 5 321 456 13 156 1.87e-12 70.9
Msa0922090 AT1G60800.1 43.564 101 45 4 344 440 50 142 2.83e-12 69.7
Msa0922090 AT5G61240.1 30.811 185 108 9 318 492 12 186 4.53e-11 64.7

Find 97 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTGAATCAATTATATT+TGG 0.182304 6_2:-60087044 None:intergenic
GGTAAAAGGCCTAGGAAATT+TGG 0.204131 6_2:-60086231 None:intergenic
GGTGATGAACCAAATATAAT+TGG 0.221312 6_2:+60086981 Msa0922090:CDS
TTCAATTTGATGGTAACTAT+TGG 0.240710 6_2:+60083447 Msa0922090:CDS
GAAATAATGGAAAGTGCTTT+TGG 0.248118 6_2:+60084897 Msa0922090:CDS
GGTGGCGAACCAATTATATT+TGG 0.266666 6_2:-60086990 None:intergenic
TGCTTATTTCTCAGAAATAA+TGG 0.269349 6_2:+60084884 Msa0922090:CDS
ATGTCTTGAGATTAGGTAAA+AGG 0.285854 6_2:-60086245 None:intergenic
GGCGATGATGTTTGCTTACT+TGG 0.288978 6_2:-60086936 None:intergenic
ACGACATTTACGATCGAATA+TGG 0.288988 6_2:+60084679 Msa0922090:CDS
ATTTCAAGTGATGATATAAA+AGG 0.289413 6_2:-60083578 None:intergenic
GTGTTTGATCTTCAATTTGA+TGG 0.296625 6_2:+60083437 Msa0922090:CDS
GCATCCCCTGAACGAAATTC+TGG 0.299178 6_2:-60087071 None:intergenic
TGGCACCATACCTGCATCTT+TGG 0.302333 6_2:+60086390 Msa0922090:CDS
TTTATCCAATCCCAACTATA+AGG 0.304545 6_2:-60085846 None:intergenic
TTTATCAGTGAAAGATTTAG+AGG 0.315077 6_2:-60083204 None:intergenic
AATACATGCAATTTATCAAT+AGG 0.324435 6_2:+60084829 Msa0922090:CDS
TCAATTTGATGGTAACTATT+GGG 0.333029 6_2:+60083448 Msa0922090:CDS
TGAGTAAAAGAAAAGTTAAA+AGG 0.356238 6_2:-60083115 None:intergenic
AAATATCTTAGAGTGCTTAA+TGG 0.380504 6_2:-60083305 None:intergenic
ACTTACAATGTCTTGAGATT+AGG 0.385064 6_2:-60086252 None:intergenic
CAATGCTGTTACACGAGGTT+TGG 0.390206 6_2:-60085883 None:intergenic
TATGCTAGTGAAATTTCCTT+TGG 0.390714 6_2:-60083525 None:intergenic
GCAGGAACTTGTCTTACAAT+AGG 0.391305 6_2:+60086362 Msa0922090:intron
GTCTACCATATCCTTATAGT+TGG 0.394733 6_2:+60085835 Msa0922090:CDS
CAATCCCAACTATAAGGATA+TGG 0.397012 6_2:-60085840 None:intergenic
AGTCCTATAGTTCCTCCTCT+TGG 0.400671 6_2:+60084963 Msa0922090:CDS
TTGCAATGGAGATATGCTTT+TGG 0.410315 6_2:+60083656 Msa0922090:CDS
TTGCAAAATAATACTATTGA+AGG 0.415770 6_2:+60086201 Msa0922090:CDS
CTTCCAAGAGGAGGAACTAT+AGG 0.418083 6_2:-60084966 None:intergenic
TTGGTGGAAATGAAACTATC+AGG 0.427791 6_2:+60083675 Msa0922090:CDS
CATATCCTTATAGTTGGGAT+TGG 0.431394 6_2:+60085841 Msa0922090:CDS
TTGTCTTACAATAGGTTCAA+TGG 0.431533 6_2:+60086370 Msa0922090:CDS
GATGATGATTACATTCAAAA+TGG 0.435099 6_2:+60083248 Msa0922090:CDS
TCTACCATATCCTTATAGTT+GGG 0.435968 6_2:+60085836 Msa0922090:CDS
GCAGTCATGGAACTGAAATC+TGG 0.436453 6_2:-60086033 None:intergenic
CATTTGAAGTGCTTGTGGAT+TGG 0.444317 6_2:+60085799 Msa0922090:CDS
ATCACTTGAAATAAGAAGCT+TGG 0.453928 6_2:+60083589 Msa0922090:CDS
GGGGATGCATCAGTGGGAAA+TGG 0.454241 6_2:+60087086 Msa0922090:CDS
CACAACAAATAATTGTCTAT+CGG 0.456772 6_2:+60086881 Msa0922090:CDS
TTCTTATTCACCAAAGATGC+AGG 0.459461 6_2:-60086400 None:intergenic
ATAAACTTCATGAAAATCAT+TGG 0.461616 6_2:-60087167 None:intergenic
CATTGTTTCAAGTGCAGTCA+TGG 0.463257 6_2:-60086046 None:intergenic
AGGCCTAGGAAATTTGGAAT+AGG 0.464644 6_2:-60086225 None:intergenic
ACAACAAATAATTGTCTATC+GGG 0.464672 6_2:+60086882 Msa0922090:CDS
TTGCAAAATCAAAGCATGAT+TGG 0.470530 6_2:-60083639 None:intergenic
TCAAAATGACTATACATTGT+AGG 0.475420 6_2:-60083614 None:intergenic
GGACCTATTCCAAATTTCCT+AGG 0.478427 6_2:+60086222 Msa0922090:CDS
TGAGATTAGGTAAAAGGCCT+AGG 0.486981 6_2:-60086239 None:intergenic
CCTGAACGAAATTCTGGAAA+AGG 0.492638 6_2:-60087065 None:intergenic
ACTTCAAGAGCATTAAGTAT+AGG 0.496085 6_2:-60085174 None:intergenic
CGAATATGGACACCGGCATA+CGG 0.504321 6_2:+60084693 Msa0922090:CDS
AGGTTTGTTACAACTTAAGT+TGG 0.505252 6_2:+60085776 Msa0922090:CDS
ATAAGTCGAGGTGGTGGTGG+TGG 0.506252 6_2:-60087008 None:intergenic
ATTGGAACAAACTAGGTATC+CGG 0.516098 6_2:+60084656 Msa0922090:intron
TATTCCATTAAAGTTCCAAA+AGG 0.523384 6_2:+60083350 Msa0922090:CDS
CATATGTGTTGCTGAAACAA+AGG 0.524860 6_2:+60083544 Msa0922090:CDS
CCTAAAATAAGCTGAGGTGG+TGG 0.537757 6_2:-60086960 None:intergenic
TATCAATAGGCTTCCAGCAG+AGG 0.541708 6_2:+60084842 Msa0922090:CDS
GTTGGCATTTGAAGTGCTTG+TGG 0.543723 6_2:+60085794 Msa0922090:CDS
TCAAGAGCATTAAGTATAGG+AGG 0.545897 6_2:-60085171 None:intergenic
ATTCGATCGTAAATGTCGTC+CGG 0.547700 6_2:-60084675 None:intergenic
AAAATAAGCTGAGGTGGTGG+TGG 0.547921 6_2:-60086957 None:intergenic
ATAAGTGATGCATTCAATGC+AGG 0.548763 6_2:+60085204 Msa0922090:CDS
CTATAAGGATATGGTAGACA+AGG 0.549340 6_2:-60085831 None:intergenic
CTTGATGAATAAACTTCTTG+AGG 0.551511 6_2:-60083275 None:intergenic
ATTCACCAAAGATGCAGGTA+TGG 0.552118 6_2:-60086395 None:intergenic
AAAATAAGTCGAGGTGGTGG+TGG 0.555136 6_2:-60087011 None:intergenic
AATGAAGTGTCAACCTCTCA+AGG 0.556085 6_2:+60086905 Msa0922090:CDS
CCTAAAATAAGTCGAGGTGG+TGG 0.559848 6_2:-60087014 None:intergenic
ATCTTTGTGAGTATCAATTG+TGG 0.563921 6_2:+60083179 Msa0922090:CDS
TCGTTCAGGGGATGCATCAG+TGG 0.564300 6_2:+60087079 Msa0922090:CDS
TACACGAGGTTTGGCATCAG+TGG 0.568854 6_2:-60085874 None:intergenic
CGTTCAGGGGATGCATCAGT+GGG 0.574697 6_2:+60087080 Msa0922090:CDS
CTTGGTGACGATGCCTTGAG+AGG 0.584817 6_2:-60086918 None:intergenic
AAAATTTGTGGTATTAACAG+TGG 0.588750 6_2:-60083471 None:intergenic
GCAGGAACAGATAGCAGAGA+TGG 0.591946 6_2:+60085222 Msa0922090:CDS
TCTTTCACACTTCCAAGAGG+AGG 0.599641 6_2:-60084975 None:intergenic
CTTAGTGGTTATGAGTTGCA+AGG 0.601020 6_2:+60086003 Msa0922090:CDS
TGATACTCACAAAGATTGTG+AGG 0.602838 6_2:-60083172 None:intergenic
CTCACAAAGATTGTGAGGGA+AGG 0.603274 6_2:-60083167 None:intergenic
GAAAGTAGGATACCGTATGC+CGG 0.609585 6_2:-60084705 None:intergenic
TCACCTAAAATAAGCTGAGG+TGG 0.616632 6_2:-60086963 None:intergenic
GAAGCAATATATGTAACCAA+AGG 0.617161 6_2:+60083509 Msa0922090:CDS
GAAGTGCTTGTGGATTGGAG+TGG 0.619148 6_2:+60085804 Msa0922090:CDS
GAACGAAATTCTGGAAAAGG+TGG 0.625423 6_2:-60087062 None:intergenic
TGGTGGATGATCTTCTGCTG+TGG 0.626118 6_2:-60084763 None:intergenic
TCAAATTGAAGATCAAACAC+TGG 0.635505 6_2:-60083434 None:intergenic
ACTTACAATGCTGTTACACG+AGG 0.647769 6_2:-60085888 None:intergenic
ACTTCTTTCACACTTCCAAG+AGG 0.652469 6_2:-60084978 None:intergenic
GATACTCACAAAGATTGTGA+GGG 0.654422 6_2:-60083171 None:intergenic
TCATCACCTAAAATAAGTCG+AGG 0.660823 6_2:-60087020 None:intergenic
AATTGAAGATCAAACACTGG+TGG 0.660940 6_2:-60083431 None:intergenic
TCATCACCTAAAATAAGCTG+AGG 0.673295 6_2:-60086966 None:intergenic
TCACCTAAAATAAGTCGAGG+TGG 0.683696 6_2:-60087017 None:intergenic
TATAAGGATATGGTAGACAA+GGG 0.684916 6_2:-60085830 None:intergenic
TTACGATCGAATATGGACAC+CGG 0.697980 6_2:+60084686 Msa0922090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGATTAGTTAAAAAAATA+TGG - chr6_2:60084142-60084161 None:intergenic 10.0%
!! AATATCAAAATTTGATAAAT+TGG - chr6_2:60084380-60084399 None:intergenic 10.0%
!!! TTTTTCTATCTATTTTTAAA+TGG + chr6_2:60086108-60086127 Msa0922090:intron 10.0%
!! AATAAAATACAATAAACTAT+TGG - chr6_2:60086138-60086157 None:intergenic 10.0%
!! CTATTATATAAAATTAGAAT+CGG - chr6_2:60086591-60086610 None:intergenic 10.0%
!!! TTTTTTTTAACAATTTTTTC+TGG + chr6_2:60086818-60086837 Msa0922090:intron 10.0%
!!! ATAGATTAGTTAAAAAAATA+TGG - chr6_2:60084142-60084161 None:intergenic 10.0%
!! AATATCAAAATTTGATAAAT+TGG - chr6_2:60084380-60084399 None:intergenic 10.0%
!!! TTTTTCTATCTATTTTTAAA+TGG + chr6_2:60086108-60086127 Msa0922090:intron 10.0%
!! AATAAAATACAATAAACTAT+TGG - chr6_2:60086138-60086157 None:intergenic 10.0%
!! CTATTATATAAAATTAGAAT+CGG - chr6_2:60086591-60086610 None:intergenic 10.0%
!!! TTTTTTTTAACAATTTTTTC+TGG + chr6_2:60086818-60086837 Msa0922090:intron 10.0%
!! ATCAACATAATAAAAATTTG+TGG - chr6_2:60083486-60083505 None:intergenic 15.0%
!! TTTATTGTATAGAGAAAAAT+TGG + chr6_2:60084025-60084044 Msa0922090:intron 15.0%
!! TATAATAGCTACTAATAATT+TGG + chr6_2:60085955-60085974 Msa0922090:intron 15.0%
!! AAAAATATTTGATGAAAATG+TGG - chr6_2:60086718-60086737 None:intergenic 15.0%
!!! TCTATATATCTAATGTTTTA+AGG - chr6_2:60086765-60086784 None:intergenic 15.0%
!! GTTTCTAACTTTAATTAATT+TGG + chr6_2:60086848-60086867 Msa0922090:intron 15.0%
!! ATCAACATAATAAAAATTTG+TGG - chr6_2:60083486-60083505 None:intergenic 15.0%
!! TTTATTGTATAGAGAAAAAT+TGG + chr6_2:60084025-60084044 Msa0922090:intron 15.0%
!! TATAATAGCTACTAATAATT+TGG + chr6_2:60085955-60085974 Msa0922090:intron 15.0%
!! AAAAATATTTGATGAAAATG+TGG - chr6_2:60086718-60086737 None:intergenic 15.0%
!!! TCTATATATCTAATGTTTTA+AGG - chr6_2:60086765-60086784 None:intergenic 15.0%
!! GTTTCTAACTTTAATTAATT+TGG + chr6_2:60086848-60086867 Msa0922090:intron 15.0%
!! TGAGTAAAAGAAAAGTTAAA+AGG - chr6_2:60083118-60083137 None:intergenic 20.0%
!! CTGATAAAAACAATATAAGA+TGG + chr6_2:60083219-60083238 Msa0922090:CDS 20.0%
!!! ATTTCAAGTGATGATATAAA+AGG - chr6_2:60083581-60083600 None:intergenic 20.0%
!! TTTAAAAACCCTTTATAATG+GGG - chr6_2:60084446-60084465 None:intergenic 20.0%
!!! CTTTAAAAACCCTTTATAAT+GGG - chr6_2:60084447-60084466 None:intergenic 20.0%
!!! ACTTTAAAAACCCTTTATAA+TGG - chr6_2:60084448-60084467 None:intergenic 20.0%
!!! AAAAACCATAGACTTTTTTT+AGG - chr6_2:60084483-60084502 None:intergenic 20.0%
!! AATACATGCAATTTATCAAT+AGG + chr6_2:60084829-60084848 Msa0922090:CDS 20.0%
!! AACAAACAAAAGATAAACTA+AGG + chr6_2:60085333-60085352 Msa0922090:intron 20.0%
!! AAGCTATCATGAAAAATTTA+TGG + chr6_2:60085395-60085414 Msa0922090:intron 20.0%
!!! TATCTCTGATATCATTTTTA+TGG - chr6_2:60085462-60085481 None:intergenic 20.0%
!! TCTTATCATCATTAGAATTT+GGG - chr6_2:60085642-60085661 None:intergenic 20.0%
!! ATCTTATCATCATTAGAATT+TGG - chr6_2:60085643-60085662 None:intergenic 20.0%
!!! GTTTTAATTTGTCAAATTAG+TGG + chr6_2:60085752-60085771 Msa0922090:intron 20.0%
!! GTATGTGACTTAAAAAATAT+AGG + chr6_2:60085977-60085996 Msa0922090:intron 20.0%
!! AAAAAATATAGGTATCTTAG+TGG + chr6_2:60085988-60086007 Msa0922090:intron 20.0%
!! TTGCAAAATAATACTATTGA+AGG + chr6_2:60086201-60086220 Msa0922090:CDS 20.0%
!! ATAAACTTCATGAAAATCAT+TGG - chr6_2:60087170-60087189 None:intergenic 20.0%
!! TGAGTAAAAGAAAAGTTAAA+AGG - chr6_2:60083118-60083137 None:intergenic 20.0%
!! CTGATAAAAACAATATAAGA+TGG + chr6_2:60083219-60083238 Msa0922090:CDS 20.0%
!!! ATTTCAAGTGATGATATAAA+AGG - chr6_2:60083581-60083600 None:intergenic 20.0%
!! TTTAAAAACCCTTTATAATG+GGG - chr6_2:60084446-60084465 None:intergenic 20.0%
!!! CTTTAAAAACCCTTTATAAT+GGG - chr6_2:60084447-60084466 None:intergenic 20.0%
!!! ACTTTAAAAACCCTTTATAA+TGG - chr6_2:60084448-60084467 None:intergenic 20.0%
!!! AAAAACCATAGACTTTTTTT+AGG - chr6_2:60084483-60084502 None:intergenic 20.0%
!! AATACATGCAATTTATCAAT+AGG + chr6_2:60084829-60084848 Msa0922090:CDS 20.0%
!! AACAAACAAAAGATAAACTA+AGG + chr6_2:60085333-60085352 Msa0922090:intron 20.0%
!! AAGCTATCATGAAAAATTTA+TGG + chr6_2:60085395-60085414 Msa0922090:intron 20.0%
!!! TATCTCTGATATCATTTTTA+TGG - chr6_2:60085462-60085481 None:intergenic 20.0%
!! TCTTATCATCATTAGAATTT+GGG - chr6_2:60085642-60085661 None:intergenic 20.0%
!! ATCTTATCATCATTAGAATT+TGG - chr6_2:60085643-60085662 None:intergenic 20.0%
!!! GTTTTAATTTGTCAAATTAG+TGG + chr6_2:60085752-60085771 Msa0922090:intron 20.0%
!! GTATGTGACTTAAAAAATAT+AGG + chr6_2:60085977-60085996 Msa0922090:intron 20.0%
!! AAAAAATATAGGTATCTTAG+TGG + chr6_2:60085988-60086007 Msa0922090:intron 20.0%
!! TTGCAAAATAATACTATTGA+AGG + chr6_2:60086201-60086220 Msa0922090:CDS 20.0%
!! ATAAACTTCATGAAAATCAT+TGG - chr6_2:60087170-60087189 None:intergenic 20.0%
! TTTATCAGTGAAAGATTTAG+AGG - chr6_2:60083207-60083226 None:intergenic 25.0%
! AAAAACAATATAAGATGGAG+TGG + chr6_2:60083224-60083243 Msa0922090:CDS 25.0%
! GATGATGATTACATTCAAAA+TGG + chr6_2:60083248-60083267 Msa0922090:CDS 25.0%
!! AAATATCTTAGAGTGCTTAA+TGG - chr6_2:60083308-60083327 None:intergenic 25.0%
!!! AGCAATTTTTCTTTCTAGTT+GGG - chr6_2:60083331-60083350 None:intergenic 25.0%
!!! TAGCAATTTTTCTTTCTAGT+TGG - chr6_2:60083332-60083351 None:intergenic 25.0%
! TATTCCATTAAAGTTCCAAA+AGG + chr6_2:60083350-60083369 Msa0922090:CDS 25.0%
!! TTCAATTTGATGGTAACTAT+TGG + chr6_2:60083447-60083466 Msa0922090:CDS 25.0%
!! TCAATTTGATGGTAACTATT+GGG + chr6_2:60083448-60083467 Msa0922090:CDS 25.0%
! AAAATTTGTGGTATTAACAG+TGG - chr6_2:60083474-60083493 None:intergenic 25.0%
! TCAAAATGACTATACATTGT+AGG - chr6_2:60083617-60083636 None:intergenic 25.0%
! TTAATGATGCTATATGTCTA+AGG + chr6_2:60083856-60083875 Msa0922090:intron 25.0%
!!! AATGGACATGTATTTTGAAA+CGG - chr6_2:60084083-60084102 None:intergenic 25.0%
!!! CACATCATTGTTTTAAATTG+CGG + chr6_2:60084401-60084420 Msa0922090:intron 25.0%
!!! GTTACATAGACTTTTTTTTG+AGG - chr6_2:60084524-60084543 None:intergenic 25.0%
!! TGCTTATTTCTCAGAAATAA+TGG + chr6_2:60084884-60084903 Msa0922090:CDS 25.0%
! TTAAATTGCTTATCCAAACA+AGG - chr6_2:60085270-60085289 None:intergenic 25.0%
!! GAGATAATCTAAGATTTGTT+TGG + chr6_2:60085476-60085495 Msa0922090:intron 25.0%
! TGAAAAATAAAAGCAACTCA+TGG - chr6_2:60085715-60085734 None:intergenic 25.0%
!! TAATTTGTCAAATTAGTGGA+AGG + chr6_2:60085756-60085775 Msa0922090:intron 25.0%
!!! TTTTTTTTCTTGATTCATGC+AGG + chr6_2:60086344-60086363 Msa0922090:intron 25.0%
! TAAATGCAATGGGAAAATAA+TGG - chr6_2:60086453-60086472 None:intergenic 25.0%
! TTTCCCATTGCATTTAAAAA+TGG + chr6_2:60086457-60086476 Msa0922090:intron 25.0%
!!! CTTCCATTTTTAAATGCAAT+GGG - chr6_2:60086463-60086482 None:intergenic 25.0%
! AGTAAAAAATACTGAAGGAT+CGG - chr6_2:60086664-60086683 None:intergenic 25.0%
! GTGAAAGTAAAAAATACTGA+AGG - chr6_2:60086669-60086688 None:intergenic 25.0%
!!! TCAGTATTTTTTACTTTCAC+TGG + chr6_2:60086669-60086688 Msa0922090:intron 25.0%
! CACAACAAATAATTGTCTAT+CGG + chr6_2:60086881-60086900 Msa0922090:CDS 25.0%
! ACAACAAATAATTGTCTATC+GGG + chr6_2:60086882-60086901 Msa0922090:CDS 25.0%
! TTTATCAGTGAAAGATTTAG+AGG - chr6_2:60083207-60083226 None:intergenic 25.0%
! AAAAACAATATAAGATGGAG+TGG + chr6_2:60083224-60083243 Msa0922090:CDS 25.0%
! GATGATGATTACATTCAAAA+TGG + chr6_2:60083248-60083267 Msa0922090:CDS 25.0%
!! AAATATCTTAGAGTGCTTAA+TGG - chr6_2:60083308-60083327 None:intergenic 25.0%
!!! AGCAATTTTTCTTTCTAGTT+GGG - chr6_2:60083331-60083350 None:intergenic 25.0%
!!! TAGCAATTTTTCTTTCTAGT+TGG - chr6_2:60083332-60083351 None:intergenic 25.0%
! TATTCCATTAAAGTTCCAAA+AGG + chr6_2:60083350-60083369 Msa0922090:CDS 25.0%
!! TTCAATTTGATGGTAACTAT+TGG + chr6_2:60083447-60083466 Msa0922090:CDS 25.0%
!! TCAATTTGATGGTAACTATT+GGG + chr6_2:60083448-60083467 Msa0922090:CDS 25.0%
! AAAATTTGTGGTATTAACAG+TGG - chr6_2:60083474-60083493 None:intergenic 25.0%
! TCAAAATGACTATACATTGT+AGG - chr6_2:60083617-60083636 None:intergenic 25.0%
! TTAATGATGCTATATGTCTA+AGG + chr6_2:60083856-60083875 Msa0922090:intron 25.0%
!!! AATGGACATGTATTTTGAAA+CGG - chr6_2:60084083-60084102 None:intergenic 25.0%
!!! CACATCATTGTTTTAAATTG+CGG + chr6_2:60084401-60084420 Msa0922090:intron 25.0%
!!! GTTACATAGACTTTTTTTTG+AGG - chr6_2:60084524-60084543 None:intergenic 25.0%
!! TGCTTATTTCTCAGAAATAA+TGG + chr6_2:60084884-60084903 Msa0922090:CDS 25.0%
! TTAAATTGCTTATCCAAACA+AGG - chr6_2:60085270-60085289 None:intergenic 25.0%
!! GAGATAATCTAAGATTTGTT+TGG + chr6_2:60085476-60085495 Msa0922090:intron 25.0%
! TGAAAAATAAAAGCAACTCA+TGG - chr6_2:60085715-60085734 None:intergenic 25.0%
!! TAATTTGTCAAATTAGTGGA+AGG + chr6_2:60085756-60085775 Msa0922090:intron 25.0%
!!! TTTTTTTTCTTGATTCATGC+AGG + chr6_2:60086344-60086363 Msa0922090:intron 25.0%
! TAAATGCAATGGGAAAATAA+TGG - chr6_2:60086453-60086472 None:intergenic 25.0%
! TTTCCCATTGCATTTAAAAA+TGG + chr6_2:60086457-60086476 Msa0922090:intron 25.0%
!!! CTTCCATTTTTAAATGCAAT+GGG - chr6_2:60086463-60086482 None:intergenic 25.0%
! AGTAAAAAATACTGAAGGAT+CGG - chr6_2:60086664-60086683 None:intergenic 25.0%
! GTGAAAGTAAAAAATACTGA+AGG - chr6_2:60086669-60086688 None:intergenic 25.0%
!!! TCAGTATTTTTTACTTTCAC+TGG + chr6_2:60086669-60086688 Msa0922090:intron 25.0%
! CACAACAAATAATTGTCTAT+CGG + chr6_2:60086881-60086900 Msa0922090:CDS 25.0%
! ACAACAAATAATTGTCTATC+GGG + chr6_2:60086882-60086901 Msa0922090:CDS 25.0%
ATCTTTGTGAGTATCAATTG+TGG + chr6_2:60083179-60083198 Msa0922090:CDS 30.0%
CTTGATGAATAAACTTCTTG+AGG - chr6_2:60083278-60083297 None:intergenic 30.0%
!!! TTCACCTTTTGGAACTTTAA+TGG - chr6_2:60083357-60083376 None:intergenic 30.0%
TCAAATTGAAGATCAAACAC+TGG - chr6_2:60083437-60083456 None:intergenic 30.0%
GTGTTTGATCTTCAATTTGA+TGG + chr6_2:60083437-60083456 Msa0922090:CDS 30.0%
GAAGCAATATATGTAACCAA+AGG + chr6_2:60083509-60083528 Msa0922090:CDS 30.0%
TATGCTAGTGAAATTTCCTT+TGG - chr6_2:60083528-60083547 None:intergenic 30.0%
ATCACTTGAAATAAGAAGCT+TGG + chr6_2:60083589-60083608 Msa0922090:CDS 30.0%
TTGCAAAATCAAAGCATGAT+TGG - chr6_2:60083642-60083661 None:intergenic 30.0%
!! ATCATGCTTTGATTTTGCAA+TGG + chr6_2:60083642-60083661 Msa0922090:CDS 30.0%
TTCAAAAGTGACGACTAAAA+AGG - chr6_2:60083724-60083743 None:intergenic 30.0%
GAGCTCTTAGATAGAAAATT+AGG + chr6_2:60083926-60083945 Msa0922090:intron 30.0%
ATAGTGCACATTGCAAAAAA+TGG - chr6_2:60084101-60084120 None:intergenic 30.0%
!! CTTGGACATGTATTTTGAAA+CGG + chr6_2:60084305-60084324 Msa0922090:intron 30.0%
AATTGCAACCCCATTATAAA+GGG + chr6_2:60084435-60084454 Msa0922090:intron 30.0%
!!! GAAATAATGGAAAGTGCTTT+TGG + chr6_2:60084897-60084916 Msa0922090:CDS 30.0%
! ATTTGCTGAAGCTGTAATAT+TGG - chr6_2:60085012-60085031 None:intergenic 30.0%
!! ACTTCAAGAGCATTAAGTAT+AGG - chr6_2:60085177-60085196 None:intergenic 30.0%
!! AGGTTTGTTACAACTTAAGT+TGG + chr6_2:60085776-60085795 Msa0922090:CDS 30.0%
TATAAGGATATGGTAGACAA+GGG - chr6_2:60085833-60085852 None:intergenic 30.0%
TCTACCATATCCTTATAGTT+GGG + chr6_2:60085836-60085855 Msa0922090:CDS 30.0%
TTTATCCAATCCCAACTATA+AGG - chr6_2:60085849-60085868 None:intergenic 30.0%
ATGTCTTGAGATTAGGTAAA+AGG - chr6_2:60086248-60086267 None:intergenic 30.0%
ACTTACAATGTCTTGAGATT+AGG - chr6_2:60086255-60086274 None:intergenic 30.0%
TTGTCTTACAATAGGTTCAA+TGG + chr6_2:60086370-60086389 Msa0922090:CDS 30.0%
!! CCTTCCATTTTTAAATGCAA+TGG - chr6_2:60086464-60086483 None:intergenic 30.0%
CCATTGCATTTAAAAATGGA+AGG + chr6_2:60086461-60086480 Msa0922090:intron 30.0%
TTGCATTTAAAAATGGAAGG+AGG + chr6_2:60086464-60086483 Msa0922090:intron 30.0%
TTGGTTAGAGAAAAATTGAG+AGG + chr6_2:60086491-60086510 Msa0922090:intron 30.0%
GGTGATGAACCAAATATAAT+TGG + chr6_2:60086981-60087000 Msa0922090:CDS 30.0%
GGTGGTGAATCAATTATATT+TGG - chr6_2:60087047-60087066 None:intergenic 30.0%
ATCTTTGTGAGTATCAATTG+TGG + chr6_2:60083179-60083198 Msa0922090:CDS 30.0%
CTTGATGAATAAACTTCTTG+AGG - chr6_2:60083278-60083297 None:intergenic 30.0%
!!! TTCACCTTTTGGAACTTTAA+TGG - chr6_2:60083357-60083376 None:intergenic 30.0%
TCAAATTGAAGATCAAACAC+TGG - chr6_2:60083437-60083456 None:intergenic 30.0%
GTGTTTGATCTTCAATTTGA+TGG + chr6_2:60083437-60083456 Msa0922090:CDS 30.0%
GAAGCAATATATGTAACCAA+AGG + chr6_2:60083509-60083528 Msa0922090:CDS 30.0%
TATGCTAGTGAAATTTCCTT+TGG - chr6_2:60083528-60083547 None:intergenic 30.0%
ATCACTTGAAATAAGAAGCT+TGG + chr6_2:60083589-60083608 Msa0922090:CDS 30.0%
TTGCAAAATCAAAGCATGAT+TGG - chr6_2:60083642-60083661 None:intergenic 30.0%
!! ATCATGCTTTGATTTTGCAA+TGG + chr6_2:60083642-60083661 Msa0922090:CDS 30.0%
TTCAAAAGTGACGACTAAAA+AGG - chr6_2:60083724-60083743 None:intergenic 30.0%
GAGCTCTTAGATAGAAAATT+AGG + chr6_2:60083926-60083945 Msa0922090:intron 30.0%
ATAGTGCACATTGCAAAAAA+TGG - chr6_2:60084101-60084120 None:intergenic 30.0%
!! CTTGGACATGTATTTTGAAA+CGG + chr6_2:60084305-60084324 Msa0922090:intron 30.0%
AATTGCAACCCCATTATAAA+GGG + chr6_2:60084435-60084454 Msa0922090:intron 30.0%
!!! GAAATAATGGAAAGTGCTTT+TGG + chr6_2:60084897-60084916 Msa0922090:CDS 30.0%
! ATTTGCTGAAGCTGTAATAT+TGG - chr6_2:60085012-60085031 None:intergenic 30.0%
!! ACTTCAAGAGCATTAAGTAT+AGG - chr6_2:60085177-60085196 None:intergenic 30.0%
!! AGGTTTGTTACAACTTAAGT+TGG + chr6_2:60085776-60085795 Msa0922090:CDS 30.0%
TATAAGGATATGGTAGACAA+GGG - chr6_2:60085833-60085852 None:intergenic 30.0%
TCTACCATATCCTTATAGTT+GGG + chr6_2:60085836-60085855 Msa0922090:CDS 30.0%
TTTATCCAATCCCAACTATA+AGG - chr6_2:60085849-60085868 None:intergenic 30.0%
ATGTCTTGAGATTAGGTAAA+AGG - chr6_2:60086248-60086267 None:intergenic 30.0%
ACTTACAATGTCTTGAGATT+AGG - chr6_2:60086255-60086274 None:intergenic 30.0%
TTGTCTTACAATAGGTTCAA+TGG + chr6_2:60086370-60086389 Msa0922090:CDS 30.0%
!! CCTTCCATTTTTAAATGCAA+TGG - chr6_2:60086464-60086483 None:intergenic 30.0%
CCATTGCATTTAAAAATGGA+AGG + chr6_2:60086461-60086480 Msa0922090:intron 30.0%
TTGCATTTAAAAATGGAAGG+AGG + chr6_2:60086464-60086483 Msa0922090:intron 30.0%
TTGGTTAGAGAAAAATTGAG+AGG + chr6_2:60086491-60086510 Msa0922090:intron 30.0%
GGTGATGAACCAAATATAAT+TGG + chr6_2:60086981-60087000 Msa0922090:CDS 30.0%
GGTGGTGAATCAATTATATT+TGG - chr6_2:60087047-60087066 None:intergenic 30.0%
GATACTCACAAAGATTGTGA+GGG - chr6_2:60083174-60083193 None:intergenic 35.0%
TGATACTCACAAAGATTGTG+AGG - chr6_2:60083175-60083194 None:intergenic 35.0%
!!! GCAAGAACTTTTTCACCTTT+TGG - chr6_2:60083368-60083387 None:intergenic 35.0%
AAGGTGAAAAAGTTCTTGCT+AGG + chr6_2:60083369-60083388 Msa0922090:CDS 35.0%
AGGTGAAAAAGTTCTTGCTA+GGG + chr6_2:60083370-60083389 Msa0922090:CDS 35.0%
AATTGAAGATCAAACACTGG+TGG - chr6_2:60083434-60083453 None:intergenic 35.0%
! CATATGTGTTGCTGAAACAA+AGG + chr6_2:60083544-60083563 Msa0922090:CDS 35.0%
! TTGCAATGGAGATATGCTTT+TGG + chr6_2:60083656-60083675 Msa0922090:CDS 35.0%
TTGGTGGAAATGAAACTATC+AGG + chr6_2:60083675-60083694 Msa0922090:CDS 35.0%
AAGGTATAGAGGGAATAATG+TGG - chr6_2:60083705-60083724 None:intergenic 35.0%
! GACGACTAAAAAGGTATAGA+GGG - chr6_2:60083715-60083734 None:intergenic 35.0%
! TGACGACTAAAAAGGTATAG+AGG - chr6_2:60083716-60083735 None:intergenic 35.0%
TCTTATGAGACTCAAATGAG+CGG + chr6_2:60083814-60083833 Msa0922090:intron 35.0%
!!! GACATGTATTTTGAAACGGA+GGG - chr6_2:60084309-60084328 None:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+GGG + chr6_2:60084309-60084328 Msa0922090:intron 35.0%
GAATTGCAACCCCATTATAA+AGG + chr6_2:60084434-60084453 Msa0922090:intron 35.0%
ACGTGCCTAAAAAAAGTCTA+TGG + chr6_2:60084475-60084494 Msa0922090:intron 35.0%
TGTGCGTGAAAGTGAAATTA+CGG - chr6_2:60084557-60084576 None:intergenic 35.0%
!! CTATTGTTTGGTGCATTGAT+TGG + chr6_2:60084638-60084657 Msa0922090:intron 35.0%
!! TGCATTGATTGGAACAAACT+AGG + chr6_2:60084649-60084668 Msa0922090:intron 35.0%
ATTGGAACAAACTAGGTATC+CGG + chr6_2:60084656-60084675 Msa0922090:intron 35.0%
ACGACATTTACGATCGAATA+TGG + chr6_2:60084679-60084698 Msa0922090:CDS 35.0%
!!! TGATTCCTCGCTTTTTACTT+CGG - chr6_2:60084730-60084749 None:intergenic 35.0%
!!! TTTTTTAATGCAGCTTCTGG+TGG - chr6_2:60084783-60084802 None:intergenic 35.0%
!!! GCATTTTTTAATGCAGCTTC+TGG - chr6_2:60084786-60084805 None:intergenic 35.0%
! TAAACATGATTTTCCTCTGC+TGG - chr6_2:60084858-60084877 None:intergenic 35.0%
GGAACTATAGGACTCAAAAA+TGG - chr6_2:60084957-60084976 None:intergenic 35.0%
!! TCAAGAGCATTAAGTATAGG+AGG - chr6_2:60085174-60085193 None:intergenic 35.0%
ATAAGTGATGCATTCAATGC+AGG + chr6_2:60085204-60085223 Msa0922090:CDS 35.0%
!! AAGTGTGTTATAGCCTTGTT+TGG + chr6_2:60085254-60085273 Msa0922090:intron 35.0%
ATAGTCCAAATGTCCAATTG+TGG + chr6_2:60085525-60085544 Msa0922090:intron 35.0%
TAGTCCAAATGTCCAATTGT+GGG + chr6_2:60085526-60085545 Msa0922090:intron 35.0%
! ATCTCTTTTATGCCCACAAT+TGG - chr6_2:60085541-60085560 None:intergenic 35.0%
CTATAAGGATATGGTAGACA+AGG - chr6_2:60085834-60085853 None:intergenic 35.0%
GTCTACCATATCCTTATAGT+TGG + chr6_2:60085835-60085854 Msa0922090:CDS 35.0%
CAATCCCAACTATAAGGATA+TGG - chr6_2:60085843-60085862 None:intergenic 35.0%
CATATCCTTATAGTTGGGAT+TGG + chr6_2:60085841-60085860 Msa0922090:CDS 35.0%
TTCTTATTCACCAAAGATGC+AGG - chr6_2:60086403-60086422 None:intergenic 35.0%
AAAAATGGAAGGAGGAAAGT+TGG + chr6_2:60086472-60086491 Msa0922090:intron 35.0%
TCATCACCTAAAATAAGCTG+AGG - chr6_2:60086969-60086988 None:intergenic 35.0%
TCATCACCTAAAATAAGTCG+AGG - chr6_2:60087023-60087042 None:intergenic 35.0%
! CTTTTCCAGAATTTCGTTCA+GGG + chr6_2:60087066-60087085 Msa0922090:CDS 35.0%
! TTTTCCAGAATTTCGTTCAG+GGG + chr6_2:60087067-60087086 Msa0922090:CDS 35.0%
GATACTCACAAAGATTGTGA+GGG - chr6_2:60083174-60083193 None:intergenic 35.0%
TGATACTCACAAAGATTGTG+AGG - chr6_2:60083175-60083194 None:intergenic 35.0%
!!! GCAAGAACTTTTTCACCTTT+TGG - chr6_2:60083368-60083387 None:intergenic 35.0%
AAGGTGAAAAAGTTCTTGCT+AGG + chr6_2:60083369-60083388 Msa0922090:CDS 35.0%
AGGTGAAAAAGTTCTTGCTA+GGG + chr6_2:60083370-60083389 Msa0922090:CDS 35.0%
AATTGAAGATCAAACACTGG+TGG - chr6_2:60083434-60083453 None:intergenic 35.0%
! CATATGTGTTGCTGAAACAA+AGG + chr6_2:60083544-60083563 Msa0922090:CDS 35.0%
! TTGCAATGGAGATATGCTTT+TGG + chr6_2:60083656-60083675 Msa0922090:CDS 35.0%
TTGGTGGAAATGAAACTATC+AGG + chr6_2:60083675-60083694 Msa0922090:CDS 35.0%
AAGGTATAGAGGGAATAATG+TGG - chr6_2:60083705-60083724 None:intergenic 35.0%
! GACGACTAAAAAGGTATAGA+GGG - chr6_2:60083715-60083734 None:intergenic 35.0%
! TGACGACTAAAAAGGTATAG+AGG - chr6_2:60083716-60083735 None:intergenic 35.0%
TCTTATGAGACTCAAATGAG+CGG + chr6_2:60083814-60083833 Msa0922090:intron 35.0%
!!! GACATGTATTTTGAAACGGA+GGG - chr6_2:60084309-60084328 None:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+GGG + chr6_2:60084309-60084328 Msa0922090:intron 35.0%
GAATTGCAACCCCATTATAA+AGG + chr6_2:60084434-60084453 Msa0922090:intron 35.0%
ACGTGCCTAAAAAAAGTCTA+TGG + chr6_2:60084475-60084494 Msa0922090:intron 35.0%
TGTGCGTGAAAGTGAAATTA+CGG - chr6_2:60084557-60084576 None:intergenic 35.0%
!! CTATTGTTTGGTGCATTGAT+TGG + chr6_2:60084638-60084657 Msa0922090:intron 35.0%
!! TGCATTGATTGGAACAAACT+AGG + chr6_2:60084649-60084668 Msa0922090:intron 35.0%
ATTGGAACAAACTAGGTATC+CGG + chr6_2:60084656-60084675 Msa0922090:intron 35.0%
ACGACATTTACGATCGAATA+TGG + chr6_2:60084679-60084698 Msa0922090:CDS 35.0%
!!! TGATTCCTCGCTTTTTACTT+CGG - chr6_2:60084730-60084749 None:intergenic 35.0%
!!! TTTTTTAATGCAGCTTCTGG+TGG - chr6_2:60084783-60084802 None:intergenic 35.0%
!!! GCATTTTTTAATGCAGCTTC+TGG - chr6_2:60084786-60084805 None:intergenic 35.0%
! TAAACATGATTTTCCTCTGC+TGG - chr6_2:60084858-60084877 None:intergenic 35.0%
GGAACTATAGGACTCAAAAA+TGG - chr6_2:60084957-60084976 None:intergenic 35.0%
!! TCAAGAGCATTAAGTATAGG+AGG - chr6_2:60085174-60085193 None:intergenic 35.0%
ATAAGTGATGCATTCAATGC+AGG + chr6_2:60085204-60085223 Msa0922090:CDS 35.0%
!! AAGTGTGTTATAGCCTTGTT+TGG + chr6_2:60085254-60085273 Msa0922090:intron 35.0%
ATAGTCCAAATGTCCAATTG+TGG + chr6_2:60085525-60085544 Msa0922090:intron 35.0%
TAGTCCAAATGTCCAATTGT+GGG + chr6_2:60085526-60085545 Msa0922090:intron 35.0%
! ATCTCTTTTATGCCCACAAT+TGG - chr6_2:60085541-60085560 None:intergenic 35.0%
CTATAAGGATATGGTAGACA+AGG - chr6_2:60085834-60085853 None:intergenic 35.0%
GTCTACCATATCCTTATAGT+TGG + chr6_2:60085835-60085854 Msa0922090:CDS 35.0%
CAATCCCAACTATAAGGATA+TGG - chr6_2:60085843-60085862 None:intergenic 35.0%
CATATCCTTATAGTTGGGAT+TGG + chr6_2:60085841-60085860 Msa0922090:CDS 35.0%
TTCTTATTCACCAAAGATGC+AGG - chr6_2:60086403-60086422 None:intergenic 35.0%
AAAAATGGAAGGAGGAAAGT+TGG + chr6_2:60086472-60086491 Msa0922090:intron 35.0%
TCATCACCTAAAATAAGCTG+AGG - chr6_2:60086969-60086988 None:intergenic 35.0%
TCATCACCTAAAATAAGTCG+AGG - chr6_2:60087023-60087042 None:intergenic 35.0%
! CTTTTCCAGAATTTCGTTCA+GGG + chr6_2:60087066-60087085 Msa0922090:CDS 35.0%
! TTTTCCAGAATTTCGTTCAG+GGG + chr6_2:60087067-60087086 Msa0922090:CDS 35.0%
! GCTAGGGCAAGCTTTTATTA+TGG + chr6_2:60083386-60083405 Msa0922090:CDS 40.0%
! CAATGGAGATATGCTTTTGG+TGG + chr6_2:60083659-60083678 Msa0922090:CDS 40.0%
AATTGCAGAGACTAATCGCT+CGG + chr6_2:60083790-60083809 Msa0922090:intron 40.0%
CTAAGGCTAGATTCAAACAC+AGG + chr6_2:60083873-60083892 Msa0922090:intron 40.0%
TAGATTCAAACACAGGACCT+TGG + chr6_2:60083880-60083899 Msa0922090:intron 40.0%
!!! GGACATGTATTTTGAAACGG+AGG - chr6_2:60084308-60084327 None:intergenic 40.0%
!!! GGACATGTATTTTGAAACGG+AGG + chr6_2:60084308-60084327 Msa0922090:intron 40.0%
CGCTGAGAATCTTTATATCG+TGG - chr6_2:60084584-60084603 None:intergenic 40.0%
CCAAACAATAGTGTCAAGCA+TGG - chr6_2:60084629-60084648 None:intergenic 40.0%
CCATGCTTGACACTATTGTT+TGG + chr6_2:60084626-60084645 Msa0922090:intron 40.0%
ATTCGATCGTAAATGTCGTC+CGG - chr6_2:60084678-60084697 None:intergenic 40.0%
TTACGATCGAATATGGACAC+CGG + chr6_2:60084686-60084705 Msa0922090:CDS 40.0%
!! CGCTTTTTACTTCGGAAAGT+AGG - chr6_2:60084722-60084741 None:intergenic 40.0%
ACTTTCCGAAGTAAAAAGCG+AGG + chr6_2:60084722-60084741 Msa0922090:CDS 40.0%
ACTTCTTTCACACTTCCAAG+AGG - chr6_2:60084981-60085000 None:intergenic 40.0%
CATTTGGACTATGAACTGAG+TGG - chr6_2:60085517-60085536 None:intergenic 40.0%
TATGCCCACAATTGGACATT+TGG - chr6_2:60085533-60085552 None:intergenic 40.0%
! CATTTGAAGTGCTTGTGGAT+TGG + chr6_2:60085799-60085818 Msa0922090:CDS 40.0%
ACTTACAATGCTGTTACACG+AGG - chr6_2:60085891-60085910 None:intergenic 40.0%
CTTAGTGGTTATGAGTTGCA+AGG + chr6_2:60086003-60086022 Msa0922090:CDS 40.0%
! CATTGTTTCAAGTGCAGTCA+TGG - chr6_2:60086049-60086068 None:intergenic 40.0%
GGACCTATTCCAAATTTCCT+AGG + chr6_2:60086222-60086241 Msa0922090:CDS 40.0%
! AGGCCTAGGAAATTTGGAAT+AGG - chr6_2:60086228-60086247 None:intergenic 40.0%
GGTAAAAGGCCTAGGAAATT+TGG - chr6_2:60086234-60086253 None:intergenic 40.0%
TGAGATTAGGTAAAAGGCCT+AGG - chr6_2:60086242-60086261 None:intergenic 40.0%
GCAGGAACTTGTCTTACAAT+AGG + chr6_2:60086362-60086381 Msa0922090:intron 40.0%
ATTCACCAAAGATGCAGGTA+TGG - chr6_2:60086398-60086417 None:intergenic 40.0%
TTAGAATCGGTTGACGATCA+TGG - chr6_2:60086578-60086597 None:intergenic 40.0%
! AATGAAGTGTCAACCTCTCA+AGG + chr6_2:60086905-60086924 Msa0922090:CDS 40.0%
TCACCTAAAATAAGCTGAGG+TGG - chr6_2:60086966-60086985 None:intergenic 40.0%
GGTGGCGAACCAATTATATT+TGG - chr6_2:60086993-60087012 None:intergenic 40.0%
TCACCTAAAATAAGTCGAGG+TGG - chr6_2:60087020-60087039 None:intergenic 40.0%
! GAACGAAATTCTGGAAAAGG+TGG - chr6_2:60087065-60087084 None:intergenic 40.0%
! CCTGAACGAAATTCTGGAAA+AGG - chr6_2:60087068-60087087 None:intergenic 40.0%
! CCTTTTCCAGAATTTCGTTC+AGG + chr6_2:60087065-60087084 Msa0922090:CDS 40.0%
! GCTAGGGCAAGCTTTTATTA+TGG + chr6_2:60083386-60083405 Msa0922090:CDS 40.0%
! CAATGGAGATATGCTTTTGG+TGG + chr6_2:60083659-60083678 Msa0922090:CDS 40.0%
AATTGCAGAGACTAATCGCT+CGG + chr6_2:60083790-60083809 Msa0922090:intron 40.0%
CTAAGGCTAGATTCAAACAC+AGG + chr6_2:60083873-60083892 Msa0922090:intron 40.0%
TAGATTCAAACACAGGACCT+TGG + chr6_2:60083880-60083899 Msa0922090:intron 40.0%
!!! GGACATGTATTTTGAAACGG+AGG - chr6_2:60084308-60084327 None:intergenic 40.0%
!!! GGACATGTATTTTGAAACGG+AGG + chr6_2:60084308-60084327 Msa0922090:intron 40.0%
CGCTGAGAATCTTTATATCG+TGG - chr6_2:60084584-60084603 None:intergenic 40.0%
CCAAACAATAGTGTCAAGCA+TGG - chr6_2:60084629-60084648 None:intergenic 40.0%
CCATGCTTGACACTATTGTT+TGG + chr6_2:60084626-60084645 Msa0922090:intron 40.0%
ATTCGATCGTAAATGTCGTC+CGG - chr6_2:60084678-60084697 None:intergenic 40.0%
TTACGATCGAATATGGACAC+CGG + chr6_2:60084686-60084705 Msa0922090:CDS 40.0%
!! CGCTTTTTACTTCGGAAAGT+AGG - chr6_2:60084722-60084741 None:intergenic 40.0%
ACTTTCCGAAGTAAAAAGCG+AGG + chr6_2:60084722-60084741 Msa0922090:CDS 40.0%
ACTTCTTTCACACTTCCAAG+AGG - chr6_2:60084981-60085000 None:intergenic 40.0%
CATTTGGACTATGAACTGAG+TGG - chr6_2:60085517-60085536 None:intergenic 40.0%
TATGCCCACAATTGGACATT+TGG - chr6_2:60085533-60085552 None:intergenic 40.0%
! CATTTGAAGTGCTTGTGGAT+TGG + chr6_2:60085799-60085818 Msa0922090:CDS 40.0%
ACTTACAATGCTGTTACACG+AGG - chr6_2:60085891-60085910 None:intergenic 40.0%
CTTAGTGGTTATGAGTTGCA+AGG + chr6_2:60086003-60086022 Msa0922090:CDS 40.0%
! CATTGTTTCAAGTGCAGTCA+TGG - chr6_2:60086049-60086068 None:intergenic 40.0%
GGACCTATTCCAAATTTCCT+AGG + chr6_2:60086222-60086241 Msa0922090:CDS 40.0%
! AGGCCTAGGAAATTTGGAAT+AGG - chr6_2:60086228-60086247 None:intergenic 40.0%
GGTAAAAGGCCTAGGAAATT+TGG - chr6_2:60086234-60086253 None:intergenic 40.0%
TGAGATTAGGTAAAAGGCCT+AGG - chr6_2:60086242-60086261 None:intergenic 40.0%
GCAGGAACTTGTCTTACAAT+AGG + chr6_2:60086362-60086381 Msa0922090:intron 40.0%
ATTCACCAAAGATGCAGGTA+TGG - chr6_2:60086398-60086417 None:intergenic 40.0%
TTAGAATCGGTTGACGATCA+TGG - chr6_2:60086578-60086597 None:intergenic 40.0%
! AATGAAGTGTCAACCTCTCA+AGG + chr6_2:60086905-60086924 Msa0922090:CDS 40.0%
TCACCTAAAATAAGCTGAGG+TGG - chr6_2:60086966-60086985 None:intergenic 40.0%
GGTGGCGAACCAATTATATT+TGG - chr6_2:60086993-60087012 None:intergenic 40.0%
TCACCTAAAATAAGTCGAGG+TGG - chr6_2:60087020-60087039 None:intergenic 40.0%
! GAACGAAATTCTGGAAAAGG+TGG - chr6_2:60087065-60087084 None:intergenic 40.0%
! CCTGAACGAAATTCTGGAAA+AGG - chr6_2:60087068-60087087 None:intergenic 40.0%
! CCTTTTCCAGAATTTCGTTC+AGG + chr6_2:60087065-60087084 Msa0922090:CDS 40.0%
CTCACAAAGATTGTGAGGGA+AGG - chr6_2:60083170-60083189 None:intergenic 45.0%
ATTGCAGAGACTAATCGCTC+GGG + chr6_2:60083791-60083810 Msa0922090:intron 45.0%
GAGATAACGCACGTTAACCA+AGG - chr6_2:60083900-60083919 None:intergenic 45.0%
! GTGCATTGACATGTGTGAAG+TGG + chr6_2:60084278-60084297 Msa0922090:intron 45.0%
CATGTGTGAAGTGGTTGACT+TGG + chr6_2:60084287-60084306 Msa0922090:intron 45.0%
TTTAAATTGCGGCCCGTAAC+TGG + chr6_2:60084412-60084431 Msa0922090:intron 45.0%
TGGGGTTGCAATTCCAGTTA+CGG - chr6_2:60084428-60084447 None:intergenic 45.0%
GAAAGTAGGATACCGTATGC+CGG - chr6_2:60084708-60084727 None:intergenic 45.0%
TATCAATAGGCTTCCAGCAG+AGG + chr6_2:60084842-60084861 Msa0922090:CDS 45.0%
AGTCCTATAGTTCCTCCTCT+TGG + chr6_2:60084963-60084982 Msa0922090:CDS 45.0%
CTTCCAAGAGGAGGAACTAT+AGG - chr6_2:60084969-60084988 None:intergenic 45.0%
TCTTTCACACTTCCAAGAGG+AGG - chr6_2:60084978-60084997 None:intergenic 45.0%
CTGAGTGGTCTCATAGTGAA+TGG - chr6_2:60085502-60085521 None:intergenic 45.0%
AGAGTCTGACATCGAATGAG+TGG + chr6_2:60085565-60085584 Msa0922090:intron 45.0%
! GTTGGCATTTGAAGTGCTTG+TGG + chr6_2:60085794-60085813 Msa0922090:CDS 45.0%
CAATGCTGTTACACGAGGTT+TGG - chr6_2:60085886-60085905 None:intergenic 45.0%
GCAGTCATGGAACTGAAATC+TGG - chr6_2:60086036-60086055 None:intergenic 45.0%
GGCGATGATGTTTGCTTACT+TGG - chr6_2:60086939-60086958 None:intergenic 45.0%
! AAAATAAGCTGAGGTGGTGG+TGG - chr6_2:60086960-60086979 None:intergenic 45.0%
CCTAAAATAAGCTGAGGTGG+TGG - chr6_2:60086963-60086982 None:intergenic 45.0%
!! CCACCACCTCAGCTTATTTT+AGG + chr6_2:60086960-60086979 Msa0922090:CDS 45.0%
! AAAATAAGTCGAGGTGGTGG+TGG - chr6_2:60087014-60087033 None:intergenic 45.0%
CCTAAAATAAGTCGAGGTGG+TGG - chr6_2:60087017-60087036 None:intergenic 45.0%
!! CCACCACCTCGACTTATTTT+AGG + chr6_2:60087014-60087033 Msa0922090:CDS 45.0%
CTCACAAAGATTGTGAGGGA+AGG - chr6_2:60083170-60083189 None:intergenic 45.0%
ATTGCAGAGACTAATCGCTC+GGG + chr6_2:60083791-60083810 Msa0922090:intron 45.0%
GAGATAACGCACGTTAACCA+AGG - chr6_2:60083900-60083919 None:intergenic 45.0%
! GTGCATTGACATGTGTGAAG+TGG + chr6_2:60084278-60084297 Msa0922090:intron 45.0%
CATGTGTGAAGTGGTTGACT+TGG + chr6_2:60084287-60084306 Msa0922090:intron 45.0%
TTTAAATTGCGGCCCGTAAC+TGG + chr6_2:60084412-60084431 Msa0922090:intron 45.0%
TGGGGTTGCAATTCCAGTTA+CGG - chr6_2:60084428-60084447 None:intergenic 45.0%
GAAAGTAGGATACCGTATGC+CGG - chr6_2:60084708-60084727 None:intergenic 45.0%
TATCAATAGGCTTCCAGCAG+AGG + chr6_2:60084842-60084861 Msa0922090:CDS 45.0%
AGTCCTATAGTTCCTCCTCT+TGG + chr6_2:60084963-60084982 Msa0922090:CDS 45.0%
CTTCCAAGAGGAGGAACTAT+AGG - chr6_2:60084969-60084988 None:intergenic 45.0%
TCTTTCACACTTCCAAGAGG+AGG - chr6_2:60084978-60084997 None:intergenic 45.0%
CTGAGTGGTCTCATAGTGAA+TGG - chr6_2:60085502-60085521 None:intergenic 45.0%
AGAGTCTGACATCGAATGAG+TGG + chr6_2:60085565-60085584 Msa0922090:intron 45.0%
! GTTGGCATTTGAAGTGCTTG+TGG + chr6_2:60085794-60085813 Msa0922090:CDS 45.0%
CAATGCTGTTACACGAGGTT+TGG - chr6_2:60085886-60085905 None:intergenic 45.0%
GCAGTCATGGAACTGAAATC+TGG - chr6_2:60086036-60086055 None:intergenic 45.0%
GGCGATGATGTTTGCTTACT+TGG - chr6_2:60086939-60086958 None:intergenic 45.0%
! AAAATAAGCTGAGGTGGTGG+TGG - chr6_2:60086960-60086979 None:intergenic 45.0%
CCTAAAATAAGCTGAGGTGG+TGG - chr6_2:60086963-60086982 None:intergenic 45.0%
!! CCACCACCTCAGCTTATTTT+AGG + chr6_2:60086960-60086979 Msa0922090:CDS 45.0%
! AAAATAAGTCGAGGTGGTGG+TGG - chr6_2:60087014-60087033 None:intergenic 45.0%
CCTAAAATAAGTCGAGGTGG+TGG - chr6_2:60087017-60087036 None:intergenic 45.0%
!! CCACCACCTCGACTTATTTT+AGG + chr6_2:60087014-60087033 Msa0922090:CDS 45.0%
TTAGTCTCTGCAATTGCGCG+TGG - chr6_2:60083785-60083804 None:intergenic 50.0%
GGGGTTGCAATTCCAGTTAC+GGG - chr6_2:60084427-60084446 None:intergenic 50.0%
CGAATATGGACACCGGCATA+CGG + chr6_2:60084693-60084712 Msa0922090:CDS 50.0%
! TGGTGGATGATCTTCTGCTG+TGG - chr6_2:60084766-60084785 None:intergenic 50.0%
GCAGGAACAGATAGCAGAGA+TGG + chr6_2:60085222-60085241 Msa0922090:CDS 50.0%
GTCTGACATCGAATGAGTGG+TGG + chr6_2:60085568-60085587 Msa0922090:intron 50.0%
!! GAAGTGCTTGTGGATTGGAG+TGG + chr6_2:60085804-60085823 Msa0922090:CDS 50.0%
TACACGAGGTTTGGCATCAG+TGG - chr6_2:60085877-60085896 None:intergenic 50.0%
TGGCACCATACCTGCATCTT+TGG + chr6_2:60086390-60086409 Msa0922090:CDS 50.0%
GCATCCCCTGAACGAAATTC+TGG - chr6_2:60087074-60087093 None:intergenic 50.0%
TTAGTCTCTGCAATTGCGCG+TGG - chr6_2:60083785-60083804 None:intergenic 50.0%
GGGGTTGCAATTCCAGTTAC+GGG - chr6_2:60084427-60084446 None:intergenic 50.0%
CGAATATGGACACCGGCATA+CGG + chr6_2:60084693-60084712 Msa0922090:CDS 50.0%
! TGGTGGATGATCTTCTGCTG+TGG - chr6_2:60084766-60084785 None:intergenic 50.0%
GCAGGAACAGATAGCAGAGA+TGG + chr6_2:60085222-60085241 Msa0922090:CDS 50.0%
GTCTGACATCGAATGAGTGG+TGG + chr6_2:60085568-60085587 Msa0922090:intron 50.0%
!! GAAGTGCTTGTGGATTGGAG+TGG + chr6_2:60085804-60085823 Msa0922090:CDS 50.0%
TACACGAGGTTTGGCATCAG+TGG - chr6_2:60085877-60085896 None:intergenic 50.0%
TGGCACCATACCTGCATCTT+TGG + chr6_2:60086390-60086409 Msa0922090:CDS 50.0%
GCATCCCCTGAACGAAATTC+TGG - chr6_2:60087074-60087093 None:intergenic 50.0%
!! CTTGGTGACGATGCCTTGAG+AGG - chr6_2:60086921-60086940 None:intergenic 55.0%
!! ATAAGTCGAGGTGGTGGTGG+TGG - chr6_2:60087011-60087030 None:intergenic 55.0%
TCGTTCAGGGGATGCATCAG+TGG + chr6_2:60087079-60087098 Msa0922090:CDS 55.0%
CGTTCAGGGGATGCATCAGT+GGG + chr6_2:60087080-60087099 Msa0922090:CDS 55.0%
GGGGATGCATCAGTGGGAAA+TGG + chr6_2:60087086-60087105 Msa0922090:CDS 55.0%
!! CTTGGTGACGATGCCTTGAG+AGG - chr6_2:60086921-60086940 None:intergenic 55.0%
!! ATAAGTCGAGGTGGTGGTGG+TGG - chr6_2:60087011-60087030 None:intergenic 55.0%
TCGTTCAGGGGATGCATCAG+TGG + chr6_2:60087079-60087098 Msa0922090:CDS 55.0%
CGTTCAGGGGATGCATCAGT+GGG + chr6_2:60087080-60087099 Msa0922090:CDS 55.0%
GGGGATGCATCAGTGGGAAA+TGG + chr6_2:60087086-60087105 Msa0922090:CDS 55.0%
GTCTCTGCAATTGCGCGTGG+AGG - chr6_2:60083782-60083801 None:intergenic 60.0%
GTCTCTGCAATTGCGCGTGG+AGG - chr6_2:60083782-60083801 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 60083107 60087193 60083107 ID=Msa0922090;Name=Msa0922090
chr6_2 mRNA 60083107 60087193 60083107 ID=Msa0922090-mRNA-1;Parent=Msa0922090;Name=Msa0922090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|8|0|551
chr6_2 exon 60083107 60083696 60083107 ID=Msa0922090-mRNA-1:exon:9179;Parent=Msa0922090-mRNA-1
chr6_2 exon 60084671 60084987 60084671 ID=Msa0922090-mRNA-1:exon:9180;Parent=Msa0922090-mRNA-1
chr6_2 exon 60085151 60085243 60085151 ID=Msa0922090-mRNA-1:exon:9181;Parent=Msa0922090-mRNA-1
chr6_2 exon 60085772 60085904 60085772 ID=Msa0922090-mRNA-1:exon:9182;Parent=Msa0922090-mRNA-1
chr6_2 exon 60085999 60086067 60085999 ID=Msa0922090-mRNA-1:exon:9183;Parent=Msa0922090-mRNA-1
chr6_2 exon 60086197 60086268 60086197 ID=Msa0922090-mRNA-1:exon:9184;Parent=Msa0922090-mRNA-1
chr6_2 exon 60086366 60086434 60086366 ID=Msa0922090-mRNA-1:exon:9185;Parent=Msa0922090-mRNA-1
chr6_2 exon 60086881 60087193 60086881 ID=Msa0922090-mRNA-1:exon:9186;Parent=Msa0922090-mRNA-1
chr6_2 CDS 60083107 60083696 60083107 ID=Msa0922090-mRNA-1:cds;Parent=Msa0922090-mRNA-1
chr6_2 CDS 60084671 60084987 60084671 ID=Msa0922090-mRNA-1:cds;Parent=Msa0922090-mRNA-1
chr6_2 CDS 60085151 60085243 60085151 ID=Msa0922090-mRNA-1:cds;Parent=Msa0922090-mRNA-1
chr6_2 CDS 60085772 60085904 60085772 ID=Msa0922090-mRNA-1:cds;Parent=Msa0922090-mRNA-1
chr6_2 CDS 60085999 60086067 60085999 ID=Msa0922090-mRNA-1:cds;Parent=Msa0922090-mRNA-1
chr6_2 CDS 60086197 60086268 60086197 ID=Msa0922090-mRNA-1:cds;Parent=Msa0922090-mRNA-1
chr6_2 CDS 60086366 60086434 60086366 ID=Msa0922090-mRNA-1:cds;Parent=Msa0922090-mRNA-1
chr6_2 CDS 60086881 60087193 60086881 ID=Msa0922090-mRNA-1:cds;Parent=Msa0922090-mRNA-1
Gene Sequence

>Msa0922090

ATGAAAAGCCTTTTAACTTTTCTTTTACTCATAGCAATTTCTTTGCTATCATTCTCAAAACCTTCCCTCACAATCTTTGTGAGTATCAATTGTGGATCCTCTAAATCTTTCACTGATAAAAACAATATAAGATGGAGTGGTGATGATGATTACATTCAAAATGGTGTGCCTCAAGAAGTTTATTCATCAAGTTCTAGTCCATTAAGCACTCTAAGATATTTCCCAACTAGAAAGAAAAATTGCTATTCCATTAAAGTTCCAAAAGGTGAAAAAGTTCTTGCTAGGGCAAGCTTTTATTATGGAAATTATGATAATAAATTATCACCACCAGTGTTTGATCTTCAATTTGATGGTAACTATTGGGCCACTGTTAATACCACAAATTTTTATTATGTTGATTATGAAGCAATATATGTAACCAAAGGAAATTTCACTAGCATATGTGTTGCTGAAACAAAGGCTACACAAATTCCTTTTATATCATCACTTGAAATAAGAAGCTTGGATCCTACAATGTATAGTCATTTTGATACCAATCATGCTTTGATTTTGCAATGGAGATATGCTTTTGGTGGAAATGAAACTATCAGGTATCCGGACGACATTTACGATCGAATATGGACACCGGCATACGGTATCCTACTTTCCGAAGTAAAAAGCGAGGAATCAAGCTTTGACATTACCACAGCAGAAGATCATCCACCAGAAGCTGCATTAAAAAATGCTATTGTTTCATCAAGCACAAATGAATACATGCAATTTATCAATAGGCTTCCAGCAGAGGAAAATCATGTTTATATAAATGCTTATTTCTCAGAAATAATGGAAAGTGCTTTTGGAAAAAGATCAATTCAGATGTATATAGATGATAAGCCATTTTTGAGTCCTATAGTTCCTCCTCTTGGAACTTCAGAGTCTTCTACTCTTCCTCCTATACTTAATGCTCTTGAAGTTTTTACAATAAGTGATGCATTCAATGCAGGAACAGATAGCAGAGATGTGGAAGGTTTGTTACAACTTAAGTTGGCATTTGAAGTGCTTGTGGATTGGAGTGGAGACCCTTGTCTACCATATCCTTATAGTTGGGATTGGATAAAATGCACCACTGATGCCAAACCTCGTGTAACAGCATTGTATCTTAGTGGTTATGAGTTGCAAGGCACTCTTCCAGATTTCAGTTCCATGACTGCACTTGAAACAATTGATTTGCAAAATAATACTATTGAAGGACCTATTCCAAATTTCCTAGGCCTTTTACCTAATCTCAAGACATTGAACTTGTCTTACAATAGGTTCAATGGCACCATACCTGCATCTTTGGTGAATAAGAAAATTGAAACTGACACAACAAATAATTGTCTATCGGGAATGAAGTGTCAACCTCTCAAGGCATCGTCACCAAGTAAGCAAACATCATCGCCACCACCACCTCAGCTTATTTTAGGTGATGAACCAAATATAATTGGTTCGCCACCACCACCACCTCGACTTATTTTAGGTGATGAACCAAATATAATTGATTCACCACCTTTTCCAGAATTTCGTTCAGGGGATGCATCAGTGGGAAATGGATGCTTGAAGAACAACAAAATGAACATATTATTCATACTAGCTGCACAAACTTTGCTACCAATGATTTTCATGAAGTTTATATGA
Protein sequence

>Msa0922090

MKSLLTFLLLIAISLLSFSKPSLTIFVSINCGSSKSFTDKNNIRWSGDDDYIQNGVPQEVYSSSSSPLSTLRYFPTRKKNCYSIKVPKGEKVLARASFYYGNYDNKLSPPVFDLQFDGNYWATVNTTNFYYVDYEAIYVTKGNFTSICVAETKATQIPFISSLEIRSLDPTMYSHFDTNHALILQWRYAFGGNETIRYPDDIYDRIWTPAYGILLSEVKSEESSFDITTAEDHPPEAALKNAIVSSSTNEYMQFINRLPAEENHVYINAYFSEIMESAFGKRSIQMYIDDKPFLSPIVPPLGTSESSTLPPILNALEVFTISDAFNAGTDSRDVEGLLQLKLAFEVLVDWSGDPCLPYPYSWDWIKCTTDAKPRVTALYLSGYELQGTLPDFSSMTALETIDLQNNTIEGPIPNFLGLLPNLKTLNLSYNRFNGTIPASLVNKKIETDTTNNCLSGMKCQPLKASSPSKQTSSPPPPQLILGDEPNIIGSPPPPPRLILGDEPNIIDSPPFPEFRSGDASVGNGCLKNNKMNILFILAAQTLLPMIFMKFI*