Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219400 | XP_013464840.1 | 96.129 | 310 | 12 | 0 | 3 | 312 | 4 | 313 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219400 | sp|Q0V7X4|FIT_ARATH | 51.964 | 331 | 122 | 9 | 1 | 312 | 5 | 317 | 4.87e-102 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219400 | A0A072VL86 | 96.129 | 310 | 12 | 0 | 3 | 312 | 4 | 313 | 0.0 | 618 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0219400 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004990 | Msa0219400 | 0.803132 | 4.033816e-49 | -8.615850e-47 |
| Msa0010150 | Msa0219400 | 0.812236 | 4.692954e-51 | -8.615850e-47 |
| Msa0011010 | Msa0219400 | 0.808923 | 2.439421e-50 | -8.615850e-47 |
| Msa0011040 | Msa0219400 | 0.822542 | 2.240601e-53 | -8.615850e-47 |
| Msa0016380 | Msa0219400 | -0.805404 | 1.356689e-49 | -8.615850e-47 |
| Msa0017710 | Msa0219400 | 0.810110 | 1.356552e-50 | -8.615850e-47 |
| Msa0025570 | Msa0219400 | 0.807745 | 4.350860e-50 | -8.615850e-47 |
| Msa0030760 | Msa0219400 | -0.806128 | 9.560789e-50 | -8.615850e-47 |
| Msa0048380 | Msa0219400 | 0.828765 | 7.492950e-55 | -8.615850e-47 |
| Msa0053040 | Msa0219400 | 0.800128 | 1.666227e-48 | -8.615850e-47 |
| Msa0059880 | Msa0219400 | 0.814932 | 1.197483e-51 | -8.615850e-47 |
| Msa0073110 | Msa0219400 | 0.819015 | 1.449428e-52 | -8.615850e-47 |
| Msa0078160 | Msa0219400 | -0.807017 | 6.206229e-50 | -8.615850e-47 |
| Msa0078170 | Msa0219400 | -0.818873 | 1.561574e-52 | -8.615850e-47 |
| Msa0089470 | Msa0219400 | -0.800880 | 1.170937e-48 | -8.615850e-47 |
| Msa0095910 | Msa0219400 | 0.804814 | 1.803516e-49 | -8.615850e-47 |
| Msa0098380 | Msa0219400 | 0.808463 | 3.059165e-50 | -8.615850e-47 |
| Msa0121320 | Msa0219400 | 0.825854 | 3.735497e-54 | -8.615850e-47 |
| Msa0150910 | Msa0219400 | 0.825560 | 4.385329e-54 | -8.615850e-47 |
| Msa0166180 | Msa0219400 | 0.818271 | 2.138712e-52 | -8.615850e-47 |
| Msa0170730 | Msa0219400 | -0.803916 | 2.774595e-49 | -8.615850e-47 |
| Msa0175060 | Msa0219400 | 0.805178 | 1.513311e-49 | -8.615850e-47 |
| Msa0208040 | Msa0219400 | -0.802312 | 5.955146e-49 | -8.615850e-47 |
| Msa0210850 | Msa0219400 | 0.806048 | 9.938231e-50 | -8.615850e-47 |
| Msa0218140 | Msa0219400 | 0.975709 | 1.877222e-140 | -8.615850e-47 |
| Msa0219400 | Msa0227970 | -0.805671 | 1.192659e-49 | -8.615850e-47 |
| Msa0219400 | Msa0244310 | 0.812460 | 4.193451e-51 | -8.615850e-47 |
| Msa0219400 | Msa0251120 | 0.807810 | 4.214293e-50 | -8.615850e-47 |
| Msa0219400 | Msa0267700 | 0.829159 | 6.016329e-55 | -8.615850e-47 |
| Msa0219400 | Msa0270730 | -0.802651 | 5.069749e-49 | -8.615850e-47 |
| Msa0219400 | Msa0279810 | 0.800110 | 1.680456e-48 | -8.615850e-47 |
| Msa0219400 | Msa0282830 | 0.811940 | 5.445683e-51 | -8.615850e-47 |
| Msa0219400 | Msa0307630 | 0.832476 | 9.248831e-56 | -8.615850e-47 |
| Msa0219400 | Msa0333770 | 0.801664 | 8.092350e-49 | -8.615850e-47 |
| Msa0219400 | Msa0349910 | 0.805890 | 1.072960e-49 | -8.615850e-47 |
| Msa0219400 | Msa0354600 | 0.819273 | 1.266377e-52 | -8.615850e-47 |
| Msa0219400 | Msa0357550 | 0.813149 | 2.962589e-51 | -8.615850e-47 |
| Msa0219400 | Msa0357560 | 0.802113 | 6.544440e-49 | -8.615850e-47 |
| Msa0219400 | Msa0364030 | -0.805276 | 1.443600e-49 | -8.615850e-47 |
| Msa0219400 | Msa0366510 | 0.802893 | 4.520292e-49 | -8.615850e-47 |
| Msa0219400 | Msa0368620 | 0.804356 | 2.246891e-49 | -8.615850e-47 |
| Msa0219400 | Msa0369990 | 0.810967 | 8.857690e-51 | -8.615850e-47 |
| Msa0219400 | Msa0389710 | 0.805623 | 1.220487e-49 | -8.615850e-47 |
| Msa0219400 | Msa0403740 | -0.803574 | 3.266638e-49 | -8.615850e-47 |
| Msa0219400 | Msa0417400 | 0.811463 | 6.913138e-51 | -8.615850e-47 |
| Msa0219400 | Msa0428720 | -0.817531 | 3.142384e-52 | -8.615850e-47 |
| Msa0219400 | Msa0449500 | 0.803169 | 3.962926e-49 | -8.615850e-47 |
| Msa0219400 | Msa0456450 | -0.805703 | 1.174347e-49 | -8.615850e-47 |
| Msa0219400 | Msa0469770 | -0.810338 | 1.211497e-50 | -8.615850e-47 |
| Msa0219400 | Msa0471130 | -0.804254 | 2.359655e-49 | -8.615850e-47 |
| Msa0219400 | Msa0480260 | 0.803853 | 2.858444e-49 | -8.615850e-47 |
| Msa0219400 | Msa0491770 | 0.802445 | 5.590797e-49 | -8.615850e-47 |
| Msa0219400 | Msa0497680 | 0.802772 | 4.787447e-49 | -8.615850e-47 |
| Msa0219400 | Msa0508160 | 0.808106 | 3.644337e-50 | -8.615850e-47 |
| Msa0219400 | Msa0531800 | 0.800896 | 1.162156e-48 | -8.615850e-47 |
| Msa0219400 | Msa0535570 | 0.821225 | 4.521301e-53 | -8.615850e-47 |
| Msa0219400 | Msa0561830 | 0.802479 | 5.501837e-49 | -8.615850e-47 |
| Msa0219400 | Msa0585720 | -0.809167 | 2.163562e-50 | -8.615850e-47 |
| Msa0219400 | Msa0588040 | 0.802380 | 5.767000e-49 | -8.615850e-47 |
| Msa0219400 | Msa0625900 | -0.807453 | 5.016596e-50 | -8.615850e-47 |
| Msa0219400 | Msa0628200 | 0.804622 | 1.977162e-49 | -8.615850e-47 |
| Msa0219400 | Msa0631700 | 0.811061 | 8.449622e-51 | -8.615850e-47 |
| Msa0219400 | Msa0655370 | 0.808542 | 2.943301e-50 | -8.615850e-47 |
| Msa0219400 | Msa0663580 | -0.806883 | 6.625990e-50 | -8.615850e-47 |
| Msa0219400 | Msa0663690 | -0.810281 | 1.246361e-50 | -8.615850e-47 |
| Msa0219400 | Msa0680460 | 0.811830 | 5.752456e-51 | -8.615850e-47 |
| Msa0219400 | Msa0719330 | -0.800615 | 1.326452e-48 | -8.615850e-47 |
| Msa0219400 | Msa0727230 | 0.816115 | 6.531974e-52 | -8.615850e-47 |
| Msa0219400 | Msa0758880 | -0.804871 | 1.754724e-49 | -8.615850e-47 |
| Msa0219400 | Msa0772160 | -0.805496 | 1.298029e-49 | -8.615850e-47 |
| Msa0219400 | Msa0792410 | 0.828814 | 7.294276e-55 | -8.615850e-47 |
| Msa0219400 | Msa0801920 | -0.801733 | 7.832547e-49 | -8.615850e-47 |
| Msa0219400 | Msa0802600 | 0.808470 | 3.048056e-50 | -8.615850e-47 |
| Msa0219400 | Msa0814160 | 0.844163 | 8.963178e-59 | -8.615850e-47 |
| Msa0219400 | Msa0829250 | -0.804833 | 1.786579e-49 | -8.615850e-47 |
| Msa0219400 | Msa0833360 | -0.800173 | 1.631488e-48 | -8.615850e-47 |
| Msa0219400 | Msa0838120 | -0.801954 | 7.057027e-49 | -8.615850e-47 |
| Msa0219400 | Msa0854840 | 0.812196 | 4.787651e-51 | -8.615850e-47 |
| Msa0219400 | Msa0861400 | -0.803040 | 4.214691e-49 | -8.615850e-47 |
| Msa0219400 | Msa0893840 | 0.813156 | 2.951908e-51 | -8.615850e-47 |
| Msa0219400 | Msa0896920 | 0.801657 | 8.120299e-49 | -8.615850e-47 |
| Msa0219400 | Msa0922090 | 0.815691 | 8.118039e-52 | -8.615850e-47 |
| Msa0219400 | Msa0975950 | 0.802224 | 6.210575e-49 | -8.615850e-47 |
| Msa0219400 | Msa0987640 | 0.802789 | 4.748371e-49 | -8.615850e-47 |
| Msa0219400 | Msa1037360 | 0.803790 | 2.946308e-49 | -8.615850e-47 |
| Msa0219400 | Msa1044050 | -0.803389 | 3.569039e-49 | -8.615850e-47 |
| Msa0219400 | Msa1047300 | 0.803117 | 4.063153e-49 | -8.615850e-47 |
| Msa0219400 | Msa1047340 | 0.804562 | 2.035461e-49 | -8.615850e-47 |
| Msa0219400 | Msa1074560 | 0.800742 | 1.249735e-48 | -8.615850e-47 |
| Msa0219400 | Msa1078120 | -0.800541 | 1.373258e-48 | -8.615850e-47 |
| Msa0219400 | Msa1078210 | -0.806018 | 1.008302e-49 | -8.615850e-47 |
| Msa0219400 | Msa1108560 | 0.806131 | 9.546592e-50 | -8.615850e-47 |
| Msa0219400 | Msa1111650 | 0.811765 | 5.945284e-51 | -8.615850e-47 |
| Msa0219400 | Msa1123000 | 0.816727 | 4.762879e-52 | -8.615850e-47 |
| Msa0219400 | Msa1123260 | -0.802587 | 5.226249e-49 | -8.615850e-47 |
| Msa0219400 | Msa1123440 | -0.808626 | 2.824224e-50 | -8.615850e-47 |
| Msa0219400 | Msa1131120 | 0.800741 | 1.250139e-48 | -8.615850e-47 |
| Msa0219400 | Msa1156240 | 0.802237 | 6.172297e-49 | -8.615850e-47 |
| Msa0219400 | Msa1177650 | 0.820346 | 7.201133e-53 | -8.615850e-47 |
| Msa0219400 | Msa1181090 | 0.800917 | 1.150725e-48 | -8.615850e-47 |
| Msa0219400 | Msa1188080 | 0.811961 | 5.386455e-51 | -8.615850e-47 |
| Msa0219400 | Msa1191270 | 0.807335 | 5.315184e-50 | -8.615850e-47 |
| Msa0219400 | Msa1191530 | -0.800422 | 1.451927e-48 | -8.615850e-47 |
| Msa0219400 | Msa1223620 | 0.805320 | 1.412970e-49 | -8.615850e-47 |
| Msa0219400 | Msa1223960 | 0.806063 | 9.867182e-50 | -8.615850e-47 |
| Msa0219400 | Msa1223990 | 0.801862 | 7.369548e-49 | -8.615850e-47 |
| Msa0219400 | Msa1228600 | -0.813230 | 2.843821e-51 | -8.615850e-47 |
| Msa0219400 | Msa1239190 | 0.811343 | 7.340529e-51 | -8.615850e-47 |
| Msa0219400 | Msa1245530 | 0.810809 | 9.585120e-51 | -8.615850e-47 |
| Msa0219400 | Msa1254870 | 0.800634 | 1.314400e-48 | -8.615850e-47 |
| Msa0219400 | Msa1259570 | 0.802822 | 4.674064e-49 | -8.615850e-47 |
| Msa0219400 | Msa1262650 | 0.802098 | 6.589994e-49 | -8.615850e-47 |
| Msa0219400 | Msa1263110 | 0.802579 | 5.246479e-49 | -8.615850e-47 |
| Msa0219400 | Msa1263520 | 0.802151 | 6.426509e-49 | -8.615850e-47 |
| Msa0219400 | Msa1270860 | -0.803665 | 3.127380e-49 | -8.615850e-47 |
| Msa0219400 | Msa1286860 | -0.804152 | 2.478161e-49 | -8.615850e-47 |
| Msa0219400 | Msa1295210 | -0.803792 | 2.943446e-49 | -8.615850e-47 |
| Msa0219400 | Msa1317740 | 0.818214 | 2.202994e-52 | -8.615850e-47 |
| Msa0219400 | Msa1322500 | 0.821304 | 4.336079e-53 | -8.615850e-47 |
| Msa0219400 | Msa1328430 | 0.801683 | 8.020354e-49 | -8.615850e-47 |
| Msa0219400 | Msa1342360 | -0.806642 | 7.450642e-50 | -8.615850e-47 |
| Msa0219400 | Msa1364690 | 0.801511 | 8.699525e-49 | -8.615850e-47 |
| Msa0219400 | Msa1379270 | -0.804238 | 2.377961e-49 | -8.615850e-47 |
| Msa0219400 | Msa1398150 | -0.818603 | 1.798805e-52 | -8.615850e-47 |
| Msa0219400 | Msa1417220 | 0.800663 | 1.296724e-48 | -8.615850e-47 |
| Msa0219400 | Msa1421130 | 0.804521 | 2.076168e-49 | -8.615850e-47 |
| Msa0219400 | Msa1453890 | 0.806761 | 7.029116e-50 | -8.615850e-47 |
| Msa0219400 | Msa1462610 | 0.829747 | 4.328883e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219400 | MtrunA17_Chr2g0320291 | 96.129 | 310 | 12 | 0 | 3 | 312 | 4 | 313 | 0.0 | 618 |
| Msa0219400 | MtrunA17_Chr4g0028071 | 63.804 | 326 | 95 | 10 | 2 | 312 | 16 | 333 | 7.62e-130 | 373 |
| Msa0219400 | MtrunA17_Chr8g0365711 | 34.591 | 159 | 83 | 3 | 124 | 268 | 236 | 387 | 1.52e-20 | 91.3 |
| Msa0219400 | MtrunA17_Chr1g0211081 | 30.233 | 172 | 86 | 4 | 120 | 257 | 302 | 473 | 2.18e-17 | 82.4 |
| Msa0219400 | MtrunA17_Chr3g0131691 | 30.270 | 185 | 109 | 4 | 88 | 257 | 257 | 436 | 5.15e-17 | 81.3 |
| Msa0219400 | MtrunA17_Chr2g0298751 | 25.668 | 187 | 118 | 3 | 131 | 299 | 51 | 234 | 2.75e-16 | 77.0 |
| Msa0219400 | MtrunA17_Chr8g0366751 | 30.247 | 162 | 94 | 5 | 136 | 281 | 466 | 624 | 1.05e-14 | 74.7 |
| Msa0219400 | MtrunA17_Chr4g0054571 | 28.824 | 170 | 99 | 3 | 97 | 256 | 127 | 284 | 6.06e-14 | 71.2 |
| Msa0219400 | MtrunA17_Chr4g0048851 | 30.357 | 168 | 110 | 4 | 120 | 286 | 37 | 198 | 6.26e-14 | 69.7 |
| Msa0219400 | MtrunA17_Chr5g0411341 | 29.878 | 164 | 92 | 5 | 136 | 281 | 497 | 655 | 6.34e-14 | 72.4 |
| Msa0219400 | MtrunA17_Chr7g0252041 | 26.984 | 189 | 112 | 5 | 93 | 264 | 253 | 432 | 7.01e-14 | 72.0 |
| Msa0219400 | MtrunA17_Chr7g0275821 | 28.667 | 150 | 101 | 2 | 136 | 285 | 256 | 399 | 1.83e-13 | 70.5 |
| Msa0219400 | MtrunA17_Chr8g0346151 | 34.831 | 89 | 53 | 2 | 136 | 219 | 283 | 371 | 3.27e-11 | 63.9 |
| Msa0219400 | MtrunA17_Chr8g0346161 | 25.824 | 182 | 115 | 5 | 110 | 274 | 258 | 436 | 4.14e-11 | 63.5 |
| Msa0219400 | MtrunA17_Chr4g0049331 | 28.058 | 139 | 94 | 4 | 134 | 268 | 137 | 273 | 5.21e-11 | 62.4 |
| Msa0219400 | MtrunA17_Chr1g0153241 | 31.532 | 111 | 65 | 3 | 78 | 184 | 44 | 147 | 9.88e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219400 | AT2G28160.1 | 51.964 | 331 | 122 | 9 | 1 | 312 | 5 | 317 | 4.95e-103 | 305 |
| Msa0219400 | AT2G28160.2 | 51.385 | 325 | 121 | 9 | 1 | 306 | 5 | 311 | 7.21e-99 | 293 |
| Msa0219400 | AT4G29930.6 | 34.682 | 173 | 108 | 3 | 131 | 303 | 53 | 220 | 2.29e-24 | 99.0 |
| Msa0219400 | AT4G29930.2 | 34.682 | 173 | 105 | 4 | 131 | 303 | 53 | 217 | 2.30e-23 | 96.3 |
| Msa0219400 | AT5G57150.1 | 32.812 | 192 | 108 | 6 | 120 | 295 | 40 | 226 | 2.04e-22 | 94.4 |
| Msa0219400 | AT4G29930.5 | 35.099 | 151 | 92 | 3 | 131 | 281 | 53 | 197 | 2.44e-22 | 93.6 |
| Msa0219400 | AT5G57150.2 | 33.520 | 179 | 100 | 5 | 120 | 282 | 41 | 216 | 7.43e-22 | 92.4 |
| Msa0219400 | AT5G57150.5 | 35.152 | 165 | 88 | 5 | 120 | 268 | 40 | 201 | 9.58e-22 | 92.0 |
| Msa0219400 | AT5G57150.3 | 35.152 | 165 | 88 | 5 | 120 | 268 | 41 | 202 | 9.86e-22 | 91.7 |
| Msa0219400 | AT5G57150.4 | 34.969 | 163 | 91 | 4 | 120 | 268 | 41 | 202 | 3.46e-21 | 91.3 |
| Msa0219400 | AT4G29930.1 | 31.156 | 199 | 106 | 5 | 131 | 303 | 53 | 246 | 2.25e-20 | 89.0 |
| Msa0219400 | AT2G16910.1 | 34.783 | 161 | 79 | 4 | 130 | 265 | 312 | 471 | 4.86e-20 | 90.9 |
| Msa0219400 | AT4G29930.3 | 31.073 | 177 | 93 | 4 | 131 | 281 | 53 | 226 | 3.65e-19 | 85.9 |
| Msa0219400 | AT4G29930.7 | 31.073 | 177 | 93 | 4 | 131 | 281 | 53 | 226 | 3.65e-19 | 85.9 |
| Msa0219400 | AT2G46510.1 | 29.444 | 180 | 102 | 6 | 116 | 286 | 371 | 534 | 1.30e-16 | 80.9 |
| Msa0219400 | AT1G01260.1 | 35.417 | 144 | 73 | 3 | 136 | 279 | 437 | 560 | 1.84e-15 | 77.4 |
| Msa0219400 | AT1G01260.2 | 35.417 | 144 | 73 | 3 | 136 | 279 | 437 | 560 | 1.84e-15 | 77.4 |
| Msa0219400 | AT1G01260.3 | 35.417 | 144 | 73 | 3 | 136 | 279 | 437 | 560 | 1.84e-15 | 77.4 |
| Msa0219400 | AT4G29930.4 | 36.275 | 102 | 50 | 1 | 99 | 200 | 36 | 122 | 4.95e-15 | 72.4 |
| Msa0219400 | AT4G17880.1 | 28.667 | 150 | 101 | 4 | 136 | 281 | 420 | 567 | 1.36e-14 | 74.7 |
| Msa0219400 | AT1G12860.2 | 46.970 | 66 | 35 | 0 | 131 | 196 | 266 | 331 | 4.01e-13 | 70.1 |
| Msa0219400 | AT1G12860.1 | 46.970 | 66 | 35 | 0 | 131 | 196 | 266 | 331 | 4.37e-13 | 69.7 |
| Msa0219400 | AT3G26744.6 | 29.932 | 147 | 89 | 3 | 131 | 264 | 306 | 451 | 7.25e-13 | 69.3 |
| Msa0219400 | AT3G26744.1 | 29.932 | 147 | 89 | 3 | 131 | 264 | 306 | 451 | 8.24e-13 | 69.3 |
| Msa0219400 | AT3G26744.4 | 29.932 | 147 | 89 | 3 | 131 | 264 | 306 | 451 | 8.24e-13 | 69.3 |
| Msa0219400 | AT3G26744.2 | 29.932 | 147 | 89 | 3 | 131 | 264 | 306 | 451 | 8.24e-13 | 69.3 |
| Msa0219400 | AT5G46760.1 | 29.091 | 165 | 85 | 6 | 136 | 281 | 419 | 570 | 3.10e-12 | 67.4 |
| Msa0219400 | AT1G32640.1 | 28.667 | 150 | 102 | 4 | 136 | 281 | 456 | 604 | 1.91e-11 | 65.1 |
| Msa0219400 | AT4G16430.1 | 26.875 | 160 | 98 | 4 | 80 | 220 | 259 | 418 | 9.56e-11 | 62.8 |
Find 57 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTGAATGCTGAGGTTTC+AGG | 0.231415 | 2_1:+66983049 | Msa0219400:CDS |
| TATTATGATGGAGAGGTTAA+AGG | 0.240976 | 2_1:+66982486 | Msa0219400:CDS |
| GCTTTATACATTGCGTTCTT+TGG | 0.259831 | 2_1:+66982653 | Msa0219400:CDS |
| TGGATGGCTTTGAACATTAA+TGG | 0.295160 | 2_1:-66983125 | None:intergenic |
| ATGGATAAGGCCTCTATAAT+TGG | 0.313859 | 2_1:+66982983 | Msa0219400:CDS |
| TCGATAAATTGATCAAAGTT+TGG | 0.327610 | 2_1:-66982267 | None:intergenic |
| GTCATGCAGCTCAAAGTTAT+TGG | 0.328211 | 2_1:-66982232 | None:intergenic |
| CTAATTACCTTTGTAATGTT+GGG | 0.360034 | 2_1:-66982678 | None:intergenic |
| ACTAATTACCTTTGTAATGT+TGG | 0.365158 | 2_1:-66982679 | None:intergenic |
| ACTTCCTAGCTTGTGCTTGA+AGG | 0.382012 | 2_1:-66983030 | None:intergenic |
| ACCTTCAAAATTTGAAGCTA+TGG | 0.386796 | 2_1:+66983930 | Msa0219400:CDS |
| GAGCCAATTGTTGTAGGGCT+TGG | 0.390918 | 2_1:-66982456 | None:intergenic |
| TTGGAGGAATTGAAAGAAGT+TGG | 0.405788 | 2_1:-66982374 | None:intergenic |
| GGCTCCTTCTCTTATTATGA+TGG | 0.412262 | 2_1:+66982474 | Msa0219400:CDS |
| CAATTTATCGATTTAATTCG+AGG | 0.430612 | 2_1:+66982279 | Msa0219400:CDS |
| AATCCAAGCCCTACAACAAT+TGG | 0.433423 | 2_1:+66982453 | Msa0219400:CDS |
| TTGTGATCAAATGATGGGTT+TGG | 0.447521 | 2_1:-66982393 | None:intergenic |
| CTGAGAGGAGAAGGAGAGGA+AGG | 0.455802 | 2_1:+66982619 | Msa0219400:CDS |
| GAGAAGGAGCCAATTGTTGT+AGG | 0.465494 | 2_1:-66982462 | None:intergenic |
| GAGAAGGAGAGGAAGGATGA+AGG | 0.465670 | 2_1:+66982626 | Msa0219400:CDS |
| ATAGGTAAACGGTTCTGAAC+CGG | 0.467631 | 2_1:+66983901 | Msa0219400:intron |
| GAAGATGCAATATCTAACTT+TGG | 0.473277 | 2_1:+66982309 | Msa0219400:CDS |
| CCTTCAAAATTTGAAGCTAT+GGG | 0.474141 | 2_1:+66983931 | Msa0219400:CDS |
| CTCTCATTTCTGAGAGGAGA+AGG | 0.475201 | 2_1:+66982610 | Msa0219400:CDS |
| CCTCTCAGAAATGAGAGTCT+TGG | 0.475407 | 2_1:-66982604 | None:intergenic |
| AATTTGCAAGAAAATTATCC+AGG | 0.484959 | 2_1:+66983147 | Msa0219400:CDS |
| TCAGTGTCTGAAAATTATCA+AGG | 0.485823 | 2_1:+66983088 | Msa0219400:CDS |
| TTGTTGTTGTGATCAAATGA+TGG | 0.487648 | 2_1:-66982399 | None:intergenic |
| GATGGAGAGGTTAAAGGAGA+AGG | 0.491246 | 2_1:+66982492 | Msa0219400:CDS |
| CAATGAAGCAATCATTGATA+AGG | 0.492027 | 2_1:-66982338 | None:intergenic |
| ATGGCATGAATTCAAAGCCT+TGG | 0.500719 | 2_1:-66983973 | None:intergenic |
| CATGCAGTGGCTCAAAATGA+TGG | 0.501968 | 2_1:-66983992 | None:intergenic |
| AGAAGGAGCCAATTGTTGTA+GGG | 0.509001 | 2_1:-66982461 | None:intergenic |
| TATCCACATACAGATGGATA+AGG | 0.511962 | 2_1:+66982970 | Msa0219400:intron |
| TGATCGATGATGCCAACCCT+AGG | 0.520450 | 2_1:+66982565 | Msa0219400:CDS |
| AAAGGAGAAGGAGAAAATGA+TGG | 0.542463 | 2_1:+66982504 | Msa0219400:CDS |
| GAAGGAGAAAATGATGGAGG+TGG | 0.543991 | 2_1:+66982510 | Msa0219400:CDS |
| ATGTTTCAAGTAGAGGAAAG+AGG | 0.546448 | 2_1:+66983628 | Msa0219400:CDS |
| TGATCAAATGATGGGTTTGG+AGG | 0.549959 | 2_1:-66982390 | None:intergenic |
| CTTCTCTTATTATGATGGAG+AGG | 0.551672 | 2_1:+66982479 | Msa0219400:CDS |
| ACCCTAGGGCTAAAACTGAT+AGG | 0.553134 | 2_1:+66982580 | Msa0219400:CDS |
| GATGGACATGTTTCAAGTAG+AGG | 0.555283 | 2_1:+66983621 | Msa0219400:intron |
| AATTTGAAGCTATGGGTGGC+TGG | 0.562736 | 2_1:+66983938 | Msa0219400:CDS |
| TACTGCGTCTCCAATTATAG+AGG | 0.562918 | 2_1:-66982993 | None:intergenic |
| GGTGTTCTCTAGTGAGTCCA+TGG | 0.563816 | 2_1:-66982211 | None:intergenic |
| ATGACCTTCAAGCACAAGCT+AGG | 0.564350 | 2_1:+66983026 | Msa0219400:CDS |
| ATAATGTGCAATAAAGGAGA+AGG | 0.570295 | 2_1:+66983664 | Msa0219400:CDS |
| AGTAGCTGCTTCATTGTACA+AGG | 0.575970 | 2_1:+66983687 | Msa0219400:CDS |
| TGTTGTTGTGATCAAATGAT+GGG | 0.582900 | 2_1:-66982398 | None:intergenic |
| CTCTCCATCATAATAAGAGA+AGG | 0.586757 | 2_1:-66982478 | None:intergenic |
| ATTTCTGAGAGGAGAAGGAG+AGG | 0.591195 | 2_1:+66982615 | Msa0219400:CDS |
| TTTGGTTCCCAACATTACAA+AGG | 0.593392 | 2_1:+66982671 | Msa0219400:CDS |
| GGAGAAGGAGAAAATGATGG+AGG | 0.607003 | 2_1:+66982507 | Msa0219400:CDS |
| AGCTAGGAAGTTGAATGCTG+AGG | 0.609235 | 2_1:+66983042 | Msa0219400:CDS |
| TCAAAATTTGAAGCTATGGG+TGG | 0.609799 | 2_1:+66983934 | Msa0219400:CDS |
| GATCGATGATGCCAACCCTA+GGG | 0.620243 | 2_1:+66982566 | Msa0219400:CDS |
| CCAAGACTCTCATTTCTGAG+AGG | 0.669057 | 2_1:+66982604 | Msa0219400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAATTATAATTAGTTTTTA+AGG | - | chr2_1:66982770-66982789 | None:intergenic | 10.0% |
| !!! | AAAGTTTTTTCTTTATTATA+TGG | - | chr2_1:66983251-66983270 | None:intergenic | 10.0% |
| !!! | CTAATTATAATTAGTTTTTA+AGG | - | chr2_1:66982770-66982789 | None:intergenic | 10.0% |
| !!! | AAAGTTTTTTCTTTATTATA+TGG | - | chr2_1:66983251-66983270 | None:intergenic | 10.0% |
| !!! | TTGTAATTTTCTATCTTTTT+TGG | - | chr2_1:66983479-66983498 | None:intergenic | 15.0% |
| !!! | AATTCATTGATTAATGATTA+GGG | + | chr2_1:66983827-66983846 | Msa0219400:intron | 15.0% |
| !!! | TTGTAATTTTCTATCTTTTT+TGG | - | chr2_1:66983479-66983498 | None:intergenic | 15.0% |
| !!! | AATTCATTGATTAATGATTA+GGG | + | chr2_1:66983827-66983846 | Msa0219400:intron | 15.0% |
| !! | TTCGAAATTAATCGAAATAA+AGG | - | chr2_1:66982707-66982726 | None:intergenic | 20.0% |
| !!! | AAGTTGCAAAGATATAATTT+TGG | + | chr2_1:66982812-66982831 | Msa0219400:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGCACTAG+AGG | + | chr2_1:66982855-66982874 | Msa0219400:intron | 20.0% |
| !!! | ATATGCTTGATATTAATTTG+AGG | + | chr2_1:66982909-66982928 | Msa0219400:intron | 20.0% |
| !! | AATGAAAAATTAAACAAACC+TGG | - | chr2_1:66983168-66983187 | None:intergenic | 20.0% |
| !!! | AAAAATGTTGGTTTAAGATA+AGG | - | chr2_1:66983315-66983334 | None:intergenic | 20.0% |
| !!! | TAATTTTCTATCTTTTTTGG+TGG | - | chr2_1:66983476-66983495 | None:intergenic | 20.0% |
| !! | AGATAGAAAATTACAAACAA+AGG | + | chr2_1:66983483-66983502 | Msa0219400:intron | 20.0% |
| !! | CTAATCATTAATCAATGAAT+TGG | - | chr2_1:66983828-66983847 | None:intergenic | 20.0% |
| !!! | CAATTCATTGATTAATGATT+AGG | + | chr2_1:66983826-66983845 | Msa0219400:intron | 20.0% |
| !! | ATTGATGTGTTGAAAAATAT+AGG | + | chr2_1:66983883-66983902 | Msa0219400:intron | 20.0% |
| !! | TGTTGAAAAATATAGGTAAA+CGG | + | chr2_1:66983890-66983909 | Msa0219400:intron | 20.0% |
| !! | TTCGAAATTAATCGAAATAA+AGG | - | chr2_1:66982707-66982726 | None:intergenic | 20.0% |
| !!! | AAGTTGCAAAGATATAATTT+TGG | + | chr2_1:66982812-66982831 | Msa0219400:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGCACTAG+AGG | + | chr2_1:66982855-66982874 | Msa0219400:intron | 20.0% |
| !!! | ATATGCTTGATATTAATTTG+AGG | + | chr2_1:66982909-66982928 | Msa0219400:intron | 20.0% |
| !! | AATGAAAAATTAAACAAACC+TGG | - | chr2_1:66983168-66983187 | None:intergenic | 20.0% |
| !!! | AAAAATGTTGGTTTAAGATA+AGG | - | chr2_1:66983315-66983334 | None:intergenic | 20.0% |
| !!! | TAATTTTCTATCTTTTTTGG+TGG | - | chr2_1:66983476-66983495 | None:intergenic | 20.0% |
| !! | AGATAGAAAATTACAAACAA+AGG | + | chr2_1:66983483-66983502 | Msa0219400:intron | 20.0% |
| !! | CTAATCATTAATCAATGAAT+TGG | - | chr2_1:66983828-66983847 | None:intergenic | 20.0% |
| !!! | CAATTCATTGATTAATGATT+AGG | + | chr2_1:66983826-66983845 | Msa0219400:intron | 20.0% |
| !! | ATTGATGTGTTGAAAAATAT+AGG | + | chr2_1:66983883-66983902 | Msa0219400:intron | 20.0% |
| !! | TGTTGAAAAATATAGGTAAA+CGG | + | chr2_1:66983890-66983909 | Msa0219400:intron | 20.0% |
| ! | TCGATAAATTGATCAAAGTT+TGG | - | chr2_1:66982270-66982289 | None:intergenic | 25.0% |
| !!! | CAATTTATCGATTTAATTCG+AGG | + | chr2_1:66982279-66982298 | Msa0219400:CDS | 25.0% |
| ! | CTAATTACCTTTGTAATGTT+GGG | - | chr2_1:66982681-66982700 | None:intergenic | 25.0% |
| ! | ACTAATTACCTTTGTAATGT+TGG | - | chr2_1:66982682-66982701 | None:intergenic | 25.0% |
| ! | ACTTTACATTTGCAACTTAA+GGG | - | chr2_1:66982796-66982815 | None:intergenic | 25.0% |
| ! | AACTTTACATTTGCAACTTA+AGG | - | chr2_1:66982797-66982816 | None:intergenic | 25.0% |
| ! | TTTATATATCCACATACAGA+TGG | + | chr2_1:66982964-66982983 | Msa0219400:intron | 25.0% |
| !! | TAATTTTCTTGCAAATTGGA+TGG | - | chr2_1:66983144-66983163 | None:intergenic | 25.0% |
| !! | TGGATAATTTTCTTGCAAAT+TGG | - | chr2_1:66983148-66983167 | None:intergenic | 25.0% |
| ! | AATTTGCAAGAAAATTATCC+AGG | + | chr2_1:66983147-66983166 | Msa0219400:CDS | 25.0% |
| ! | AGACTCATGAAATTATAACT+TGG | - | chr2_1:66983222-66983241 | None:intergenic | 25.0% |
| ! | TTGTCGTTAAGAAAAAATGT+TGG | - | chr2_1:66983327-66983346 | None:intergenic | 25.0% |
| ! | AAAAACCAACTATAAAGTGT+TGG | - | chr2_1:66983556-66983575 | None:intergenic | 25.0% |
| ! | GCAAAAATAATGTGCAATAA+AGG | + | chr2_1:66983658-66983677 | Msa0219400:CDS | 25.0% |
| !!! | GTTATTGATGTTTTTGCTTA+AGG | + | chr2_1:66983849-66983868 | Msa0219400:intron | 25.0% |
| !!! | AAATTTTGAAGGTTCATTTC+CGG | - | chr2_1:66983923-66983942 | None:intergenic | 25.0% |
| ! | TCGATAAATTGATCAAAGTT+TGG | - | chr2_1:66982270-66982289 | None:intergenic | 25.0% |
| !!! | CAATTTATCGATTTAATTCG+AGG | + | chr2_1:66982279-66982298 | Msa0219400:CDS | 25.0% |
| ! | CTAATTACCTTTGTAATGTT+GGG | - | chr2_1:66982681-66982700 | None:intergenic | 25.0% |
| ! | ACTAATTACCTTTGTAATGT+TGG | - | chr2_1:66982682-66982701 | None:intergenic | 25.0% |
| ! | ACTTTACATTTGCAACTTAA+GGG | - | chr2_1:66982796-66982815 | None:intergenic | 25.0% |
| ! | AACTTTACATTTGCAACTTA+AGG | - | chr2_1:66982797-66982816 | None:intergenic | 25.0% |
| ! | TTTATATATCCACATACAGA+TGG | + | chr2_1:66982964-66982983 | Msa0219400:intron | 25.0% |
| !! | TAATTTTCTTGCAAATTGGA+TGG | - | chr2_1:66983144-66983163 | None:intergenic | 25.0% |
| !! | TGGATAATTTTCTTGCAAAT+TGG | - | chr2_1:66983148-66983167 | None:intergenic | 25.0% |
| ! | AATTTGCAAGAAAATTATCC+AGG | + | chr2_1:66983147-66983166 | Msa0219400:CDS | 25.0% |
| ! | AGACTCATGAAATTATAACT+TGG | - | chr2_1:66983222-66983241 | None:intergenic | 25.0% |
| ! | TTGTCGTTAAGAAAAAATGT+TGG | - | chr2_1:66983327-66983346 | None:intergenic | 25.0% |
| ! | AAAAACCAACTATAAAGTGT+TGG | - | chr2_1:66983556-66983575 | None:intergenic | 25.0% |
| ! | GCAAAAATAATGTGCAATAA+AGG | + | chr2_1:66983658-66983677 | Msa0219400:CDS | 25.0% |
| !!! | GTTATTGATGTTTTTGCTTA+AGG | + | chr2_1:66983849-66983868 | Msa0219400:intron | 25.0% |
| !!! | AAATTTTGAAGGTTCATTTC+CGG | - | chr2_1:66983923-66983942 | None:intergenic | 25.0% |
| GAAGATGCAATATCTAACTT+TGG | + | chr2_1:66982309-66982328 | Msa0219400:CDS | 30.0% | |
| CAATGAAGCAATCATTGATA+AGG | - | chr2_1:66982341-66982360 | None:intergenic | 30.0% | |
| TGTTGTTGTGATCAAATGAT+GGG | - | chr2_1:66982401-66982420 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTGATCAAATGA+TGG | - | chr2_1:66982402-66982421 | None:intergenic | 30.0% |
| ! | TATTATGATGGAGAGGTTAA+AGG | + | chr2_1:66982486-66982505 | Msa0219400:CDS | 30.0% |
| !!! | TTTTTTTTGCACTAGAGGTT+AGG | + | chr2_1:66982860-66982879 | Msa0219400:intron | 30.0% |
| !!! | TTTTTTTGCACTAGAGGTTA+GGG | + | chr2_1:66982861-66982880 | Msa0219400:intron | 30.0% |
| TCAGTGTCTGAAAATTATCA+AGG | + | chr2_1:66983088-66983107 | Msa0219400:CDS | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr2_1:66983428-66983447 | Msa0219400:intron | 30.0% | |
| AAACAAAGGACATCGTATAT+AGG | + | chr2_1:66983497-66983516 | Msa0219400:intron | 30.0% | |
| TTAGACCAACACTTTATAGT+TGG | + | chr2_1:66983548-66983567 | Msa0219400:intron | 30.0% | |
| ATAATGTGCAATAAAGGAGA+AGG | + | chr2_1:66983664-66983683 | Msa0219400:CDS | 30.0% | |
| TCAATGAATTGGATATTGAG+AGG | - | chr2_1:66983817-66983836 | None:intergenic | 30.0% | |
| ! | ACCTTCAAAATTTGAAGCTA+TGG | + | chr2_1:66983930-66983949 | Msa0219400:CDS | 30.0% |
| ! | CCTTCAAAATTTGAAGCTAT+GGG | + | chr2_1:66983931-66983950 | Msa0219400:CDS | 30.0% |
| GAAGATGCAATATCTAACTT+TGG | + | chr2_1:66982309-66982328 | Msa0219400:CDS | 30.0% | |
| CAATGAAGCAATCATTGATA+AGG | - | chr2_1:66982341-66982360 | None:intergenic | 30.0% | |
| TGTTGTTGTGATCAAATGAT+GGG | - | chr2_1:66982401-66982420 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTGATCAAATGA+TGG | - | chr2_1:66982402-66982421 | None:intergenic | 30.0% |
| ! | TATTATGATGGAGAGGTTAA+AGG | + | chr2_1:66982486-66982505 | Msa0219400:CDS | 30.0% |
| !!! | TTTTTTTTGCACTAGAGGTT+AGG | + | chr2_1:66982860-66982879 | Msa0219400:intron | 30.0% |
| !!! | TTTTTTTGCACTAGAGGTTA+GGG | + | chr2_1:66982861-66982880 | Msa0219400:intron | 30.0% |
| TCAGTGTCTGAAAATTATCA+AGG | + | chr2_1:66983088-66983107 | Msa0219400:CDS | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr2_1:66983428-66983447 | Msa0219400:intron | 30.0% | |
| AAACAAAGGACATCGTATAT+AGG | + | chr2_1:66983497-66983516 | Msa0219400:intron | 30.0% | |
| TTAGACCAACACTTTATAGT+TGG | + | chr2_1:66983548-66983567 | Msa0219400:intron | 30.0% | |
| ATAATGTGCAATAAAGGAGA+AGG | + | chr2_1:66983664-66983683 | Msa0219400:CDS | 30.0% | |
| TCAATGAATTGGATATTGAG+AGG | - | chr2_1:66983817-66983836 | None:intergenic | 30.0% | |
| ! | ACCTTCAAAATTTGAAGCTA+TGG | + | chr2_1:66983930-66983949 | Msa0219400:CDS | 30.0% |
| ! | CCTTCAAAATTTGAAGCTAT+GGG | + | chr2_1:66983931-66983950 | Msa0219400:CDS | 30.0% |
| TTGGAGGAATTGAAAGAAGT+TGG | - | chr2_1:66982377-66982396 | None:intergenic | 35.0% | |
| !! | TTGTGATCAAATGATGGGTT+TGG | - | chr2_1:66982396-66982415 | None:intergenic | 35.0% |
| CTCTCCATCATAATAAGAGA+AGG | - | chr2_1:66982481-66982500 | None:intergenic | 35.0% | |
| ! | CTTCTCTTATTATGATGGAG+AGG | + | chr2_1:66982479-66982498 | Msa0219400:CDS | 35.0% |
| AAAGGAGAAGGAGAAAATGA+TGG | + | chr2_1:66982504-66982523 | Msa0219400:CDS | 35.0% | |
| GCTTTATACATTGCGTTCTT+TGG | + | chr2_1:66982653-66982672 | Msa0219400:CDS | 35.0% | |
| ! | TTTGGTTCCCAACATTACAA+AGG | + | chr2_1:66982671-66982690 | Msa0219400:CDS | 35.0% |
| TATCCACATACAGATGGATA+AGG | + | chr2_1:66982970-66982989 | Msa0219400:intron | 35.0% | |
| ATGGATAAGGCCTCTATAAT+TGG | + | chr2_1:66982983-66983002 | Msa0219400:CDS | 35.0% | |
| !! | TGGATGGCTTTGAACATTAA+TGG | - | chr2_1:66983128-66983147 | None:intergenic | 35.0% |
| TGCATAATATATGCAAGGTC+TGG | + | chr2_1:66983433-66983452 | Msa0219400:intron | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | + | chr2_1:66983434-66983453 | Msa0219400:intron | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | + | chr2_1:66983435-66983454 | Msa0219400:intron | 35.0% | |
| TGTGCATTATGCTATGTAGA+TGG | + | chr2_1:66983603-66983622 | Msa0219400:intron | 35.0% | |
| ! | ATGTTTCAAGTAGAGGAAAG+AGG | + | chr2_1:66983628-66983647 | Msa0219400:CDS | 35.0% |
| ! | CCCATAGCTTCAAATTTTGA+AGG | - | chr2_1:66983934-66983953 | None:intergenic | 35.0% |
| ! | TCAAAATTTGAAGCTATGGG+TGG | + | chr2_1:66983934-66983953 | Msa0219400:CDS | 35.0% |
| TTGGAGGAATTGAAAGAAGT+TGG | - | chr2_1:66982377-66982396 | None:intergenic | 35.0% | |
| !! | TTGTGATCAAATGATGGGTT+TGG | - | chr2_1:66982396-66982415 | None:intergenic | 35.0% |
| CTCTCCATCATAATAAGAGA+AGG | - | chr2_1:66982481-66982500 | None:intergenic | 35.0% | |
| ! | CTTCTCTTATTATGATGGAG+AGG | + | chr2_1:66982479-66982498 | Msa0219400:CDS | 35.0% |
| AAAGGAGAAGGAGAAAATGA+TGG | + | chr2_1:66982504-66982523 | Msa0219400:CDS | 35.0% | |
| GCTTTATACATTGCGTTCTT+TGG | + | chr2_1:66982653-66982672 | Msa0219400:CDS | 35.0% | |
| ! | TTTGGTTCCCAACATTACAA+AGG | + | chr2_1:66982671-66982690 | Msa0219400:CDS | 35.0% |
| TATCCACATACAGATGGATA+AGG | + | chr2_1:66982970-66982989 | Msa0219400:intron | 35.0% | |
| ATGGATAAGGCCTCTATAAT+TGG | + | chr2_1:66982983-66983002 | Msa0219400:CDS | 35.0% | |
| !! | TGGATGGCTTTGAACATTAA+TGG | - | chr2_1:66983128-66983147 | None:intergenic | 35.0% |
| TGCATAATATATGCAAGGTC+TGG | + | chr2_1:66983433-66983452 | Msa0219400:intron | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | + | chr2_1:66983434-66983453 | Msa0219400:intron | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | + | chr2_1:66983435-66983454 | Msa0219400:intron | 35.0% | |
| TGTGCATTATGCTATGTAGA+TGG | + | chr2_1:66983603-66983622 | Msa0219400:intron | 35.0% | |
| ! | ATGTTTCAAGTAGAGGAAAG+AGG | + | chr2_1:66983628-66983647 | Msa0219400:CDS | 35.0% |
| ! | CCCATAGCTTCAAATTTTGA+AGG | - | chr2_1:66983934-66983953 | None:intergenic | 35.0% |
| ! | TCAAAATTTGAAGCTATGGG+TGG | + | chr2_1:66983934-66983953 | Msa0219400:CDS | 35.0% |
| GTCATGCAGCTCAAAGTTAT+TGG | - | chr2_1:66982235-66982254 | None:intergenic | 40.0% | |
| !! | TGATCAAATGATGGGTTTGG+AGG | - | chr2_1:66982393-66982412 | None:intergenic | 40.0% |
| AATCCAAGCCCTACAACAAT+TGG | + | chr2_1:66982453-66982472 | Msa0219400:CDS | 40.0% | |
| AGAAGGAGCCAATTGTTGTA+GGG | - | chr2_1:66982464-66982483 | None:intergenic | 40.0% | |
| GGCTCCTTCTCTTATTATGA+TGG | + | chr2_1:66982474-66982493 | Msa0219400:CDS | 40.0% | |
| !! | ACCTATCAGTTTTAGCCCTA+GGG | - | chr2_1:66982584-66982603 | None:intergenic | 40.0% |
| TACTGCGTCTCCAATTATAG+AGG | - | chr2_1:66982996-66983015 | None:intergenic | 40.0% | |
| AAGTTGAATGCTGAGGTTTC+AGG | + | chr2_1:66983049-66983068 | Msa0219400:CDS | 40.0% | |
| !!! | ATCTTTTTTGGTGGTGTCCA+GGG | - | chr2_1:66983467-66983486 | None:intergenic | 40.0% |
| !!! | TATCTTTTTTGGTGGTGTCC+AGG | - | chr2_1:66983468-66983487 | None:intergenic | 40.0% |
| CAAAGGACATCGTATATAGG+CGG | + | chr2_1:66983500-66983519 | Msa0219400:intron | 40.0% | |
| ! | GATGGACATGTTTCAAGTAG+AGG | + | chr2_1:66983621-66983640 | Msa0219400:intron | 40.0% |
| AGTAGCTGCTTCATTGTACA+AGG | + | chr2_1:66983687-66983706 | Msa0219400:CDS | 40.0% | |
| !! | ATAGGTAAACGGTTCTGAAC+CGG | + | chr2_1:66983901-66983920 | Msa0219400:intron | 40.0% |
| ATGGCATGAATTCAAAGCCT+TGG | - | chr2_1:66983976-66983995 | None:intergenic | 40.0% | |
| GTCATGCAGCTCAAAGTTAT+TGG | - | chr2_1:66982235-66982254 | None:intergenic | 40.0% | |
| !! | TGATCAAATGATGGGTTTGG+AGG | - | chr2_1:66982393-66982412 | None:intergenic | 40.0% |
| AATCCAAGCCCTACAACAAT+TGG | + | chr2_1:66982453-66982472 | Msa0219400:CDS | 40.0% | |
| AGAAGGAGCCAATTGTTGTA+GGG | - | chr2_1:66982464-66982483 | None:intergenic | 40.0% | |
| GGCTCCTTCTCTTATTATGA+TGG | + | chr2_1:66982474-66982493 | Msa0219400:CDS | 40.0% | |
| !! | ACCTATCAGTTTTAGCCCTA+GGG | - | chr2_1:66982584-66982603 | None:intergenic | 40.0% |
| TACTGCGTCTCCAATTATAG+AGG | - | chr2_1:66982996-66983015 | None:intergenic | 40.0% | |
| AAGTTGAATGCTGAGGTTTC+AGG | + | chr2_1:66983049-66983068 | Msa0219400:CDS | 40.0% | |
| !!! | ATCTTTTTTGGTGGTGTCCA+GGG | - | chr2_1:66983467-66983486 | None:intergenic | 40.0% |
| !!! | TATCTTTTTTGGTGGTGTCC+AGG | - | chr2_1:66983468-66983487 | None:intergenic | 40.0% |
| CAAAGGACATCGTATATAGG+CGG | + | chr2_1:66983500-66983519 | Msa0219400:intron | 40.0% | |
| ! | GATGGACATGTTTCAAGTAG+AGG | + | chr2_1:66983621-66983640 | Msa0219400:intron | 40.0% |
| AGTAGCTGCTTCATTGTACA+AGG | + | chr2_1:66983687-66983706 | Msa0219400:CDS | 40.0% | |
| !! | ATAGGTAAACGGTTCTGAAC+CGG | + | chr2_1:66983901-66983920 | Msa0219400:intron | 40.0% |
| ATGGCATGAATTCAAAGCCT+TGG | - | chr2_1:66983976-66983995 | None:intergenic | 40.0% | |
| GAGAAGGAGCCAATTGTTGT+AGG | - | chr2_1:66982465-66982484 | None:intergenic | 45.0% | |
| GATGGAGAGGTTAAAGGAGA+AGG | + | chr2_1:66982492-66982511 | Msa0219400:CDS | 45.0% | |
| GGAGAAGGAGAAAATGATGG+AGG | + | chr2_1:66982507-66982526 | Msa0219400:CDS | 45.0% | |
| ! | GAAGGAGAAAATGATGGAGG+TGG | + | chr2_1:66982510-66982529 | Msa0219400:CDS | 45.0% |
| !! | ATCAGTTTTAGCCCTAGGGT+TGG | - | chr2_1:66982580-66982599 | None:intergenic | 45.0% |
| ACCCTAGGGCTAAAACTGAT+AGG | + | chr2_1:66982580-66982599 | Msa0219400:CDS | 45.0% | |
| !! | GACCTATCAGTTTTAGCCCT+AGG | - | chr2_1:66982585-66982604 | None:intergenic | 45.0% |
| CCTCTCAGAAATGAGAGTCT+TGG | - | chr2_1:66982607-66982626 | None:intergenic | 45.0% | |
| CCAAGACTCTCATTTCTGAG+AGG | + | chr2_1:66982604-66982623 | Msa0219400:CDS | 45.0% | |
| ! | CTCTCATTTCTGAGAGGAGA+AGG | + | chr2_1:66982610-66982629 | Msa0219400:CDS | 45.0% |
| ! | ATTTCTGAGAGGAGAAGGAG+AGG | + | chr2_1:66982615-66982634 | Msa0219400:CDS | 45.0% |
| ! | AGGCCTTATCCATCTGTATG+TGG | - | chr2_1:66982976-66982995 | None:intergenic | 45.0% |
| ATGACCTTCAAGCACAAGCT+AGG | + | chr2_1:66983026-66983045 | Msa0219400:CDS | 45.0% | |
| ! | ACTTCCTAGCTTGTGCTTGA+AGG | - | chr2_1:66983033-66983052 | None:intergenic | 45.0% |
| AGCTAGGAAGTTGAATGCTG+AGG | + | chr2_1:66983042-66983061 | Msa0219400:CDS | 45.0% | |
| ATTCGTCTTGTGCAGAGACT+TGG | - | chr2_1:66983363-66983382 | None:intergenic | 45.0% | |
| GCTCACGGGAACTATCTTAT+TGG | - | chr2_1:66983391-66983410 | None:intergenic | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | - | chr2_1:66983406-66983425 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr2_1:66983406-66983425 | Msa0219400:intron | 45.0% |
| ! | AATTTGAAGCTATGGGTGGC+TGG | + | chr2_1:66983938-66983957 | Msa0219400:CDS | 45.0% |
| GAGAAGGAGCCAATTGTTGT+AGG | - | chr2_1:66982465-66982484 | None:intergenic | 45.0% | |
| GATGGAGAGGTTAAAGGAGA+AGG | + | chr2_1:66982492-66982511 | Msa0219400:CDS | 45.0% | |
| GGAGAAGGAGAAAATGATGG+AGG | + | chr2_1:66982507-66982526 | Msa0219400:CDS | 45.0% | |
| ! | GAAGGAGAAAATGATGGAGG+TGG | + | chr2_1:66982510-66982529 | Msa0219400:CDS | 45.0% |
| !! | ATCAGTTTTAGCCCTAGGGT+TGG | - | chr2_1:66982580-66982599 | None:intergenic | 45.0% |
| ACCCTAGGGCTAAAACTGAT+AGG | + | chr2_1:66982580-66982599 | Msa0219400:CDS | 45.0% | |
| !! | GACCTATCAGTTTTAGCCCT+AGG | - | chr2_1:66982585-66982604 | None:intergenic | 45.0% |
| CCTCTCAGAAATGAGAGTCT+TGG | - | chr2_1:66982607-66982626 | None:intergenic | 45.0% | |
| CCAAGACTCTCATTTCTGAG+AGG | + | chr2_1:66982604-66982623 | Msa0219400:CDS | 45.0% | |
| ! | CTCTCATTTCTGAGAGGAGA+AGG | + | chr2_1:66982610-66982629 | Msa0219400:CDS | 45.0% |
| ! | ATTTCTGAGAGGAGAAGGAG+AGG | + | chr2_1:66982615-66982634 | Msa0219400:CDS | 45.0% |
| ! | AGGCCTTATCCATCTGTATG+TGG | - | chr2_1:66982976-66982995 | None:intergenic | 45.0% |
| ATGACCTTCAAGCACAAGCT+AGG | + | chr2_1:66983026-66983045 | Msa0219400:CDS | 45.0% | |
| ! | ACTTCCTAGCTTGTGCTTGA+AGG | - | chr2_1:66983033-66983052 | None:intergenic | 45.0% |
| AGCTAGGAAGTTGAATGCTG+AGG | + | chr2_1:66983042-66983061 | Msa0219400:CDS | 45.0% | |
| ATTCGTCTTGTGCAGAGACT+TGG | - | chr2_1:66983363-66983382 | None:intergenic | 45.0% | |
| GCTCACGGGAACTATCTTAT+TGG | - | chr2_1:66983391-66983410 | None:intergenic | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | - | chr2_1:66983406-66983425 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr2_1:66983406-66983425 | Msa0219400:intron | 45.0% |
| ! | AATTTGAAGCTATGGGTGGC+TGG | + | chr2_1:66983938-66983957 | Msa0219400:CDS | 45.0% |
| !!! | TAATTATAATTAGTTTTTAA+GGG | - | chr2_1:66982769-66982788 | None:intergenic | 5.0% |
| !!! | TAATTATAATTAGTTTTTAA+GGG | - | chr2_1:66982769-66982788 | None:intergenic | 5.0% |
| GAGCCAATTGTTGTAGGGCT+TGG | - | chr2_1:66982459-66982478 | None:intergenic | 50.0% | |
| TGATCGATGATGCCAACCCT+AGG | + | chr2_1:66982565-66982584 | Msa0219400:CDS | 50.0% | |
| GATCGATGATGCCAACCCTA+GGG | + | chr2_1:66982566-66982585 | Msa0219400:CDS | 50.0% | |
| GAGAAGGAGAGGAAGGATGA+AGG | + | chr2_1:66982626-66982645 | Msa0219400:CDS | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | - | chr2_1:66983405-66983424 | None:intergenic | 50.0% | |
| ! | GCTGGTGCTCTTTTGAACCA+AGG | + | chr2_1:66983956-66983975 | Msa0219400:CDS | 50.0% |
| GAGCCAATTGTTGTAGGGCT+TGG | - | chr2_1:66982459-66982478 | None:intergenic | 50.0% | |
| TGATCGATGATGCCAACCCT+AGG | + | chr2_1:66982565-66982584 | Msa0219400:CDS | 50.0% | |
| GATCGATGATGCCAACCCTA+GGG | + | chr2_1:66982566-66982585 | Msa0219400:CDS | 50.0% | |
| GAGAAGGAGAGGAAGGATGA+AGG | + | chr2_1:66982626-66982645 | Msa0219400:CDS | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | - | chr2_1:66983405-66983424 | None:intergenic | 50.0% | |
| ! | GCTGGTGCTCTTTTGAACCA+AGG | + | chr2_1:66983956-66983975 | Msa0219400:CDS | 50.0% |
| CTGAGAGGAGAAGGAGAGGA+AGG | + | chr2_1:66982619-66982638 | Msa0219400:CDS | 55.0% | |
| TCCCGTGAGCTTAGCTCAGT+TGG | + | chr2_1:66983401-66983420 | Msa0219400:intron | 55.0% | |
| CTGAGAGGAGAAGGAGAGGA+AGG | + | chr2_1:66982619-66982638 | Msa0219400:CDS | 55.0% | |
| TCCCGTGAGCTTAGCTCAGT+TGG | + | chr2_1:66983401-66983420 | Msa0219400:intron | 55.0% | |
| ! | AAGGTCTGGGGTTCGAACCC+TGG | + | chr2_1:66983447-66983466 | Msa0219400:intron | 60.0% |
| ! | AAGGTCTGGGGTTCGAACCC+TGG | + | chr2_1:66983447-66983466 | Msa0219400:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 66982213 | 66984003 | 66982213 | ID=Msa0219400;Name=Msa0219400 |
| chr2_1 | mRNA | 66982213 | 66984003 | 66982213 | ID=Msa0219400-mRNA-1;Parent=Msa0219400;Name=Msa0219400-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|4|0|312 |
| chr2_1 | exon | 66982213 | 66982692 | 66982213 | ID=Msa0219400-mRNA-1:exon:18876;Parent=Msa0219400-mRNA-1 |
| chr2_1 | exon | 66982983 | 66983168 | 66982983 | ID=Msa0219400-mRNA-1:exon:18877;Parent=Msa0219400-mRNA-1 |
| chr2_1 | exon | 66983622 | 66983795 | 66983622 | ID=Msa0219400-mRNA-1:exon:18878;Parent=Msa0219400-mRNA-1 |
| chr2_1 | exon | 66983905 | 66984003 | 66983905 | ID=Msa0219400-mRNA-1:exon:18879;Parent=Msa0219400-mRNA-1 |
| chr2_1 | CDS | 66982213 | 66982692 | 66982213 | ID=Msa0219400-mRNA-1:cds;Parent=Msa0219400-mRNA-1 |
| chr2_1 | CDS | 66982983 | 66983168 | 66982983 | ID=Msa0219400-mRNA-1:cds;Parent=Msa0219400-mRNA-1 |
| chr2_1 | CDS | 66983622 | 66983795 | 66983622 | ID=Msa0219400-mRNA-1:cds;Parent=Msa0219400-mRNA-1 |
| chr2_1 | CDS | 66983905 | 66984003 | 66983905 | ID=Msa0219400-mRNA-1:cds;Parent=Msa0219400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
