Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218140 | XP_013464840.1 | 96.129 | 310 | 12 | 0 | 3 | 312 | 4 | 313 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218140 | sp|Q0V7X4|FIT_ARATH | 51.964 | 331 | 122 | 9 | 1 | 312 | 5 | 317 | 4.87e-102 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218140 | A0A072VL86 | 96.129 | 310 | 12 | 0 | 3 | 312 | 4 | 313 | 0.0 | 618 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0218140 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0218140 | 0.814576 | 1.436282e-51 | -8.615850e-47 |
| Msa0004990 | Msa0218140 | 0.824439 | 8.066051e-54 | -8.615850e-47 |
| Msa0010150 | Msa0218140 | 0.824281 | 8.788183e-54 | -8.615850e-47 |
| Msa0011010 | Msa0218140 | 0.814963 | 1.178867e-51 | -8.615850e-47 |
| Msa0011040 | Msa0218140 | 0.828999 | 6.579789e-55 | -8.615850e-47 |
| Msa0017710 | Msa0218140 | 0.807241 | 5.563769e-50 | -8.615850e-47 |
| Msa0025570 | Msa0218140 | 0.810983 | 8.787310e-51 | -8.615850e-47 |
| Msa0030760 | Msa0218140 | -0.806964 | 6.368599e-50 | -8.615850e-47 |
| Msa0048380 | Msa0218140 | 0.833966 | 3.936973e-56 | -8.615850e-47 |
| Msa0048950 | Msa0218140 | 0.815731 | 7.953002e-52 | -8.615850e-47 |
| Msa0053040 | Msa0218140 | 0.821059 | 4.938738e-53 | -8.615850e-47 |
| Msa0059880 | Msa0218140 | 0.837467 | 5.109754e-57 | -8.615850e-47 |
| Msa0069480 | Msa0218140 | 0.800562 | 1.359446e-48 | -8.615850e-47 |
| Msa0073110 | Msa0218140 | 0.822649 | 2.116211e-53 | -8.615850e-47 |
| Msa0074620 | Msa0218140 | 0.800511 | 1.392521e-48 | -8.615850e-47 |
| Msa0078160 | Msa0218140 | -0.814119 | 1.812509e-51 | -8.615850e-47 |
| Msa0078170 | Msa0218140 | -0.816188 | 6.290043e-52 | -8.615850e-47 |
| Msa0087900 | Msa0218140 | 0.800764 | 1.236692e-48 | -8.615850e-47 |
| Msa0095910 | Msa0218140 | 0.804433 | 2.165546e-49 | -8.615850e-47 |
| Msa0098380 | Msa0218140 | 0.818417 | 1.981674e-52 | -8.615850e-47 |
| Msa0121320 | Msa0218140 | 0.831546 | 1.570346e-55 | -8.615850e-47 |
| Msa0136090 | Msa0218140 | 0.803918 | 2.771982e-49 | -8.615850e-47 |
| Msa0150000 | Msa0218140 | 0.800319 | 1.523723e-48 | -8.615850e-47 |
| Msa0150910 | Msa0218140 | 0.848104 | 7.579180e-60 | -8.615850e-47 |
| Msa0150920 | Msa0218140 | 0.811425 | 7.045389e-51 | -8.615850e-47 |
| Msa0163340 | Msa0218140 | 0.804176 | 2.448831e-49 | -8.615850e-47 |
| Msa0163690 | Msa0218140 | 0.803975 | 2.696481e-49 | -8.615850e-47 |
| Msa0164560 | Msa0218140 | 0.801380 | 9.254293e-49 | -8.615850e-47 |
| Msa0166180 | Msa0218140 | 0.827879 | 1.225979e-54 | -8.615850e-47 |
| Msa0170730 | Msa0218140 | -0.802687 | 4.984865e-49 | -8.615850e-47 |
| Msa0175060 | Msa0218140 | 0.814664 | 1.372731e-51 | -8.615850e-47 |
| Msa0190890 | Msa0218140 | 0.807361 | 5.249032e-50 | -8.615850e-47 |
| Msa0210790 | Msa0218140 | 0.805494 | 1.299135e-49 | -8.615850e-47 |
| Msa0210850 | Msa0218140 | 0.812275 | 4.602786e-51 | -8.615850e-47 |
| Msa0218140 | Msa0219400 | 0.975709 | 1.877222e-140 | -8.615850e-47 |
| Msa0218140 | Msa0219810 | 0.801819 | 7.520519e-49 | -8.615850e-47 |
| Msa0218140 | Msa0220090 | 0.809156 | 2.174557e-50 | -8.615850e-47 |
| Msa0218140 | Msa0227970 | -0.806781 | 6.961744e-50 | -8.615850e-47 |
| Msa0218140 | Msa0242830 | 0.802279 | 6.049171e-49 | -8.615850e-47 |
| Msa0218140 | Msa0244310 | 0.815089 | 1.105127e-51 | -8.615850e-47 |
| Msa0218140 | Msa0251120 | 0.806922 | 6.499401e-50 | -8.615850e-47 |
| Msa0218140 | Msa0258740 | 0.808480 | 3.033525e-50 | -8.615850e-47 |
| Msa0218140 | Msa0261400 | 0.813734 | 2.203659e-51 | -8.615850e-47 |
| Msa0218140 | Msa0267700 | 0.823504 | 1.336767e-53 | -8.615850e-47 |
| Msa0218140 | Msa0269710 | 0.800296 | 1.540375e-48 | -8.615850e-47 |
| Msa0218140 | Msa0274250 | 0.806585 | 7.660657e-50 | -8.615850e-47 |
| Msa0218140 | Msa0274260 | 0.800843 | 1.191655e-48 | -8.615850e-47 |
| Msa0218140 | Msa0275570 | 0.810253 | 1.263860e-50 | -8.615850e-47 |
| Msa0218140 | Msa0282830 | 0.812637 | 3.836024e-51 | -8.615850e-47 |
| Msa0218140 | Msa0299030 | 0.804359 | 2.244024e-49 | -8.615850e-47 |
| Msa0218140 | Msa0307630 | 0.832832 | 7.545854e-56 | -8.615850e-47 |
| Msa0218140 | Msa0311540 | 0.801504 | 8.728105e-49 | -8.615850e-47 |
| Msa0218140 | Msa0312540 | 0.801922 | 7.162862e-49 | -8.615850e-47 |
| Msa0218140 | Msa0318360 | 0.800363 | 1.492893e-48 | -8.615850e-47 |
| Msa0218140 | Msa0333770 | 0.805939 | 1.047958e-49 | -8.615850e-47 |
| Msa0218140 | Msa0346170 | 0.800658 | 1.299570e-48 | -8.615850e-47 |
| Msa0218140 | Msa0349910 | 0.821631 | 3.643015e-53 | -8.615850e-47 |
| Msa0218140 | Msa0354600 | 0.823823 | 1.125398e-53 | -8.615850e-47 |
| Msa0218140 | Msa0357530 | 0.804352 | 2.251622e-49 | -8.615850e-47 |
| Msa0218140 | Msa0357550 | 0.809238 | 2.088911e-50 | -8.615850e-47 |
| Msa0218140 | Msa0357560 | 0.802548 | 5.323807e-49 | -8.615850e-47 |
| Msa0218140 | Msa0364030 | -0.804586 | 2.012361e-49 | -8.615850e-47 |
| Msa0218140 | Msa0366510 | 0.820411 | 6.956548e-53 | -8.615850e-47 |
| Msa0218140 | Msa0368620 | 0.807669 | 4.514089e-50 | -8.615850e-47 |
| Msa0218140 | Msa0369990 | 0.807960 | 3.915204e-50 | -8.615850e-47 |
| Msa0218140 | Msa0389710 | 0.806720 | 7.171346e-50 | -8.615850e-47 |
| Msa0218140 | Msa0403740 | -0.802657 | 5.056735e-49 | -8.615850e-47 |
| Msa0218140 | Msa0417400 | 0.811006 | 8.685768e-51 | -8.615850e-47 |
| Msa0218140 | Msa0428720 | -0.811934 | 5.462234e-51 | -8.615850e-47 |
| Msa0218140 | Msa0444200 | 0.806415 | 8.318259e-50 | -8.615850e-47 |
| Msa0218140 | Msa0444400 | 0.801429 | 9.043723e-49 | -8.615850e-47 |
| Msa0218140 | Msa0456450 | -0.803351 | 3.632892e-49 | -8.615850e-47 |
| Msa0218140 | Msa0464310 | 0.808641 | 2.803007e-50 | -8.615850e-47 |
| Msa0218140 | Msa0469770 | -0.804535 | 2.061529e-49 | -8.615850e-47 |
| Msa0218140 | Msa0471130 | -0.808837 | 2.544732e-50 | -8.615850e-47 |
| Msa0218140 | Msa0480260 | 0.808174 | 3.525496e-50 | -8.615850e-47 |
| Msa0218140 | Msa0491770 | 0.825603 | 4.283457e-54 | -8.615850e-47 |
| Msa0218140 | Msa0497680 | 0.800032 | 1.743203e-48 | -8.615850e-47 |
| Msa0218140 | Msa0508160 | 0.809560 | 1.781160e-50 | -8.615850e-47 |
| Msa0218140 | Msa0531800 | 0.819904 | 9.091469e-53 | -8.615850e-47 |
| Msa0218140 | Msa0535570 | 0.834739 | 2.518571e-56 | -8.615850e-47 |
| Msa0218140 | Msa0561830 | 0.811868 | 5.643640e-51 | -8.615850e-47 |
| Msa0218140 | Msa0585720 | -0.805547 | 1.266158e-49 | -8.615850e-47 |
| Msa0218140 | Msa0587730 | 0.806892 | 6.597304e-50 | -8.615850e-47 |
| Msa0218140 | Msa0587930 | 0.800574 | 1.352121e-48 | -8.615850e-47 |
| Msa0218140 | Msa0588040 | 0.806292 | 8.830340e-50 | -8.615850e-47 |
| Msa0218140 | Msa0591490 | 0.803755 | 2.996677e-49 | -8.615850e-47 |
| Msa0218140 | Msa0597800 | 0.811071 | 8.408597e-51 | -8.615850e-47 |
| Msa0218140 | Msa0601400 | 0.802338 | 5.881913e-49 | -8.615850e-47 |
| Msa0218140 | Msa0604280 | 0.804245 | 2.370256e-49 | -8.615850e-47 |
| Msa0218140 | Msa0606600 | 0.800414 | 1.457828e-48 | -8.615850e-47 |
| Msa0218140 | Msa0619390 | -0.801962 | 7.030709e-49 | -8.615850e-47 |
| Msa0218140 | Msa0625900 | -0.802604 | 5.185225e-49 | -8.615850e-47 |
| Msa0218140 | Msa0628200 | 0.811603 | 6.446638e-51 | -8.615850e-47 |
| Msa0218140 | Msa0631700 | 0.824115 | 9.613613e-54 | -8.615850e-47 |
| Msa0218140 | Msa0641700 | 0.805640 | 1.210870e-49 | -8.615850e-47 |
| Msa0218140 | Msa0651820 | 0.805907 | 1.064201e-49 | -8.615850e-47 |
| Msa0218140 | Msa0655370 | 0.813505 | 2.474444e-51 | -8.615850e-47 |
| Msa0218140 | Msa0663580 | -0.802155 | 6.414691e-49 | -8.615850e-47 |
| Msa0218140 | Msa0663690 | -0.806998 | 6.266053e-50 | -8.615850e-47 |
| Msa0218140 | Msa0670360 | 0.805511 | 1.288750e-49 | -8.615850e-47 |
| Msa0218140 | Msa0680460 | 0.816207 | 6.227694e-52 | -8.615850e-47 |
| Msa0218140 | Msa0695630 | 0.811139 | 8.129911e-51 | -8.615850e-47 |
| Msa0218140 | Msa0716980 | 0.800932 | 1.143012e-48 | -8.615850e-47 |
| Msa0218140 | Msa0727230 | 0.833642 | 4.742629e-56 | -8.615850e-47 |
| Msa0218140 | Msa0747710 | 0.816289 | 5.971404e-52 | -8.615850e-47 |
| Msa0218140 | Msa0751960 | 0.802761 | 4.812341e-49 | -8.615850e-47 |
| Msa0218140 | Msa0777070 | 0.806842 | 6.757485e-50 | -8.615850e-47 |
| Msa0218140 | Msa0792410 | 0.828400 | 9.180970e-55 | -8.615850e-47 |
| Msa0218140 | Msa0802600 | 0.815928 | 7.190404e-52 | -8.615850e-47 |
| Msa0218140 | Msa0806930 | 0.801382 | 9.244629e-49 | -8.615850e-47 |
| Msa0218140 | Msa0814160 | 0.847868 | 8.804482e-60 | -8.615850e-47 |
| Msa0218140 | Msa0816140 | 0.802576 | 5.255153e-49 | -8.615850e-47 |
| Msa0218140 | Msa0824850 | 0.801498 | 8.752900e-49 | -8.615850e-47 |
| Msa0218140 | Msa0829250 | -0.802149 | 6.432419e-49 | -8.615850e-47 |
| Msa0218140 | Msa0847140 | 0.802767 | 4.798069e-49 | -8.615850e-47 |
| Msa0218140 | Msa0848720 | -0.805316 | 1.416034e-49 | -8.615850e-47 |
| Msa0218140 | Msa0854840 | 0.822566 | 2.211489e-53 | -8.615850e-47 |
| Msa0218140 | Msa0864160 | 0.803141 | 4.015908e-49 | -8.615850e-47 |
| Msa0218140 | Msa0871420 | 0.802293 | 6.008832e-49 | -8.615850e-47 |
| Msa0218140 | Msa0893840 | 0.823601 | 1.268974e-53 | -8.615850e-47 |
| Msa0218140 | Msa0896920 | 0.821821 | 3.293741e-53 | -8.615850e-47 |
| Msa0218140 | Msa0896950 | 0.804281 | 2.329306e-49 | -8.615850e-47 |
| Msa0218140 | Msa0902340 | 0.802971 | 4.353997e-49 | -8.615850e-47 |
| Msa0218140 | Msa0910830 | 0.808700 | 2.722535e-50 | -8.615850e-47 |
| Msa0218140 | Msa0913550 | 0.813779 | 2.153108e-51 | -8.615850e-47 |
| Msa0218140 | Msa0922090 | 0.806326 | 8.686663e-50 | -8.615850e-47 |
| Msa0218140 | Msa0928060 | -0.801156 | 1.028199e-48 | -8.615850e-47 |
| Msa0218140 | Msa0936630 | 0.803685 | 3.097846e-49 | -8.615850e-47 |
| Msa0218140 | Msa0973770 | 0.800941 | 1.137733e-48 | -8.615850e-47 |
| Msa0218140 | Msa0975950 | 0.803513 | 3.363642e-49 | -8.615850e-47 |
| Msa0218140 | Msa0976400 | 0.800997 | 1.108144e-48 | -8.615850e-47 |
| Msa0218140 | Msa0993450 | 0.811946 | 5.428210e-51 | -8.615850e-47 |
| Msa0218140 | Msa1021620 | 0.806471 | 8.094725e-50 | -8.615850e-47 |
| Msa0218140 | Msa1024350 | 0.802991 | 4.313152e-49 | -8.615850e-47 |
| Msa0218140 | Msa1036590 | 0.801335 | 9.451220e-49 | -8.615850e-47 |
| Msa0218140 | Msa1047300 | 0.813015 | 3.169652e-51 | -8.615850e-47 |
| Msa0218140 | Msa1047340 | 0.814565 | 1.444030e-51 | -8.615850e-47 |
| Msa0218140 | Msa1074560 | 0.802087 | 6.624633e-49 | -8.615850e-47 |
| Msa0218140 | Msa1076900 | 0.805491 | 1.301410e-49 | -8.615850e-47 |
| Msa0218140 | Msa1078210 | -0.803690 | 3.090477e-49 | -8.615850e-47 |
| Msa0218140 | Msa1085820 | 0.800259 | 1.567455e-48 | -8.615850e-47 |
| Msa0218140 | Msa1087380 | 0.800421 | 1.452473e-48 | -8.615850e-47 |
| Msa0218140 | Msa1099640 | 0.800838 | 1.194501e-48 | -8.615850e-47 |
| Msa0218140 | Msa1099650 | 0.800143 | 1.654940e-48 | -8.615850e-47 |
| Msa0218140 | Msa1100330 | 0.801721 | 7.879222e-49 | -8.615850e-47 |
| Msa0218140 | Msa1104960 | 0.810200 | 1.297263e-50 | -8.615850e-47 |
| Msa0218140 | Msa1108560 | 0.815361 | 9.614891e-52 | -8.615850e-47 |
| Msa0218140 | Msa1111650 | 0.810509 | 1.112728e-50 | -8.615850e-47 |
| Msa0218140 | Msa1112210 | -0.801160 | 1.026697e-48 | -8.615850e-47 |
| Msa0218140 | Msa1123000 | 0.808469 | 3.050891e-50 | -8.615850e-47 |
| Msa0218140 | Msa1123440 | -0.808762 | 2.640613e-50 | -8.615850e-47 |
| Msa0218140 | Msa1138110 | 0.811752 | 5.983001e-51 | -8.615850e-47 |
| Msa0218140 | Msa1148210 | 0.803235 | 3.840145e-49 | -8.615850e-47 |
| Msa0218140 | Msa1156240 | 0.806338 | 8.635213e-50 | -8.615850e-47 |
| Msa0218140 | Msa1177650 | 0.821341 | 4.250335e-53 | -8.615850e-47 |
| Msa0218140 | Msa1181090 | 0.800566 | 1.356923e-48 | -8.615850e-47 |
| Msa0218140 | Msa1188080 | 0.801947 | 7.079226e-49 | -8.615850e-47 |
| Msa0218140 | Msa1191270 | 0.807810 | 4.213137e-50 | -8.615850e-47 |
| Msa0218140 | Msa1223620 | 0.814357 | 1.605516e-51 | -8.615850e-47 |
| Msa0218140 | Msa1223960 | 0.820024 | 8.533438e-53 | -8.615850e-47 |
| Msa0218140 | Msa1223990 | 0.807764 | 4.310024e-50 | -8.615850e-47 |
| Msa0218140 | Msa1228600 | -0.802146 | 6.444264e-49 | -8.615850e-47 |
| Msa0218140 | Msa1239190 | 0.814437 | 1.541410e-51 | -8.615850e-47 |
| Msa0218140 | Msa1245530 | 0.801721 | 7.879295e-49 | -8.615850e-47 |
| Msa0218140 | Msa1254870 | 0.801613 | 8.291063e-49 | -8.615850e-47 |
| Msa0218140 | Msa1259570 | 0.805616 | 1.225193e-49 | -8.615850e-47 |
| Msa0218140 | Msa1262650 | 0.810604 | 1.061188e-50 | -8.615850e-47 |
| Msa0218140 | Msa1263110 | 0.809204 | 2.123849e-50 | -8.615850e-47 |
| Msa0218140 | Msa1263520 | 0.811382 | 7.200371e-51 | -8.615850e-47 |
| Msa0218140 | Msa1265570 | 0.804868 | 1.756667e-49 | -8.615850e-47 |
| Msa0218140 | Msa1269200 | 0.802812 | 4.697243e-49 | -8.615850e-47 |
| Msa0218140 | Msa1269500 | 0.806285 | 8.858464e-50 | -8.615850e-47 |
| Msa0218140 | Msa1273320 | 0.802064 | 6.698024e-49 | -8.615850e-47 |
| Msa0218140 | Msa1286860 | -0.808600 | 2.860436e-50 | -8.615850e-47 |
| Msa0218140 | Msa1295210 | -0.812430 | 4.257068e-51 | -8.615850e-47 |
| Msa0218140 | Msa1297220 | -0.800728 | 1.257851e-48 | -8.615850e-47 |
| Msa0218140 | Msa1302630 | 0.803503 | 3.379375e-49 | -8.615850e-47 |
| Msa0218140 | Msa1317740 | 0.822503 | 2.287408e-53 | -8.615850e-47 |
| Msa0218140 | Msa1322500 | 0.816995 | 4.147622e-52 | -8.615850e-47 |
| Msa0218140 | Msa1323120 | 0.805928 | 1.053279e-49 | -8.615850e-47 |
| Msa0218140 | Msa1323260 | -0.800557 | 1.362965e-48 | -8.615850e-47 |
| Msa0218140 | Msa1328430 | 0.802278 | 6.051509e-49 | -8.615850e-47 |
| Msa0218140 | Msa1334670 | 0.801418 | 9.090251e-49 | -8.615850e-47 |
| Msa0218140 | Msa1340440 | 0.800761 | 1.238275e-48 | -8.615850e-47 |
| Msa0218140 | Msa1342360 | -0.804317 | 2.289181e-49 | -8.615850e-47 |
| Msa0218140 | Msa1343450 | -0.805206 | 1.493215e-49 | -8.615850e-47 |
| Msa0218140 | Msa1357840 | 0.805389 | 1.367134e-49 | -8.615850e-47 |
| Msa0218140 | Msa1364690 | 0.810382 | 1.185323e-50 | -8.615850e-47 |
| Msa0218140 | Msa1365230 | 0.801165 | 1.024140e-48 | -8.615850e-47 |
| Msa0218140 | Msa1377460 | 0.811019 | 8.632614e-51 | -8.615850e-47 |
| Msa0218140 | Msa1379270 | -0.809168 | 2.161845e-50 | -8.615850e-47 |
| Msa0218140 | Msa1398150 | -0.821413 | 4.091708e-53 | -8.615850e-47 |
| Msa0218140 | Msa1407670 | 0.805533 | 1.275213e-49 | -8.615850e-47 |
| Msa0218140 | Msa1413020 | 0.800645 | 1.307993e-48 | -8.615850e-47 |
| Msa0218140 | Msa1417220 | 0.808539 | 2.946740e-50 | -8.615850e-47 |
| Msa0218140 | Msa1421130 | 0.821414 | 4.090272e-53 | -8.615850e-47 |
| Msa0218140 | Msa1449770 | 0.809889 | 1.513481e-50 | -8.615850e-47 |
| Msa0218140 | Msa1453890 | 0.812579 | 3.948932e-51 | -8.615850e-47 |
| Msa0218140 | Msa1458270 | 0.805609 | 1.229226e-49 | -8.615850e-47 |
| Msa0218140 | Msa1462610 | 0.831258 | 1.848065e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218140 | MtrunA17_Chr2g0320291 | 96.129 | 310 | 12 | 0 | 3 | 312 | 4 | 313 | 0.0 | 618 |
| Msa0218140 | MtrunA17_Chr4g0028071 | 63.804 | 326 | 95 | 10 | 2 | 312 | 16 | 333 | 7.62e-130 | 373 |
| Msa0218140 | MtrunA17_Chr8g0365711 | 34.591 | 159 | 83 | 3 | 124 | 268 | 236 | 387 | 1.52e-20 | 91.3 |
| Msa0218140 | MtrunA17_Chr1g0211081 | 30.233 | 172 | 86 | 4 | 120 | 257 | 302 | 473 | 2.18e-17 | 82.4 |
| Msa0218140 | MtrunA17_Chr3g0131691 | 30.270 | 185 | 109 | 4 | 88 | 257 | 257 | 436 | 5.15e-17 | 81.3 |
| Msa0218140 | MtrunA17_Chr2g0298751 | 25.668 | 187 | 118 | 3 | 131 | 299 | 51 | 234 | 2.75e-16 | 77.0 |
| Msa0218140 | MtrunA17_Chr8g0366751 | 30.247 | 162 | 94 | 5 | 136 | 281 | 466 | 624 | 1.05e-14 | 74.7 |
| Msa0218140 | MtrunA17_Chr4g0054571 | 28.824 | 170 | 99 | 3 | 97 | 256 | 127 | 284 | 6.06e-14 | 71.2 |
| Msa0218140 | MtrunA17_Chr4g0048851 | 30.357 | 168 | 110 | 4 | 120 | 286 | 37 | 198 | 6.26e-14 | 69.7 |
| Msa0218140 | MtrunA17_Chr5g0411341 | 29.878 | 164 | 92 | 5 | 136 | 281 | 497 | 655 | 6.34e-14 | 72.4 |
| Msa0218140 | MtrunA17_Chr7g0252041 | 26.984 | 189 | 112 | 5 | 93 | 264 | 253 | 432 | 7.01e-14 | 72.0 |
| Msa0218140 | MtrunA17_Chr7g0275821 | 28.667 | 150 | 101 | 2 | 136 | 285 | 256 | 399 | 1.83e-13 | 70.5 |
| Msa0218140 | MtrunA17_Chr8g0346151 | 34.831 | 89 | 53 | 2 | 136 | 219 | 283 | 371 | 3.27e-11 | 63.9 |
| Msa0218140 | MtrunA17_Chr8g0346161 | 25.824 | 182 | 115 | 5 | 110 | 274 | 258 | 436 | 4.14e-11 | 63.5 |
| Msa0218140 | MtrunA17_Chr4g0049331 | 28.058 | 139 | 94 | 4 | 134 | 268 | 137 | 273 | 5.21e-11 | 62.4 |
| Msa0218140 | MtrunA17_Chr1g0153241 | 31.532 | 111 | 65 | 3 | 78 | 184 | 44 | 147 | 9.88e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0218140 | AT2G28160.1 | 51.964 | 331 | 122 | 9 | 1 | 312 | 5 | 317 | 4.95e-103 | 305 |
| Msa0218140 | AT2G28160.2 | 51.385 | 325 | 121 | 9 | 1 | 306 | 5 | 311 | 7.21e-99 | 293 |
| Msa0218140 | AT4G29930.6 | 34.682 | 173 | 108 | 3 | 131 | 303 | 53 | 220 | 2.29e-24 | 99.0 |
| Msa0218140 | AT4G29930.2 | 34.682 | 173 | 105 | 4 | 131 | 303 | 53 | 217 | 2.30e-23 | 96.3 |
| Msa0218140 | AT5G57150.1 | 32.812 | 192 | 108 | 6 | 120 | 295 | 40 | 226 | 2.04e-22 | 94.4 |
| Msa0218140 | AT4G29930.5 | 35.099 | 151 | 92 | 3 | 131 | 281 | 53 | 197 | 2.44e-22 | 93.6 |
| Msa0218140 | AT5G57150.2 | 33.520 | 179 | 100 | 5 | 120 | 282 | 41 | 216 | 7.43e-22 | 92.4 |
| Msa0218140 | AT5G57150.5 | 35.152 | 165 | 88 | 5 | 120 | 268 | 40 | 201 | 9.58e-22 | 92.0 |
| Msa0218140 | AT5G57150.3 | 35.152 | 165 | 88 | 5 | 120 | 268 | 41 | 202 | 9.86e-22 | 91.7 |
| Msa0218140 | AT5G57150.4 | 34.969 | 163 | 91 | 4 | 120 | 268 | 41 | 202 | 3.46e-21 | 91.3 |
| Msa0218140 | AT4G29930.1 | 31.156 | 199 | 106 | 5 | 131 | 303 | 53 | 246 | 2.25e-20 | 89.0 |
| Msa0218140 | AT2G16910.1 | 34.783 | 161 | 79 | 4 | 130 | 265 | 312 | 471 | 4.86e-20 | 90.9 |
| Msa0218140 | AT4G29930.3 | 31.073 | 177 | 93 | 4 | 131 | 281 | 53 | 226 | 3.65e-19 | 85.9 |
| Msa0218140 | AT4G29930.7 | 31.073 | 177 | 93 | 4 | 131 | 281 | 53 | 226 | 3.65e-19 | 85.9 |
| Msa0218140 | AT2G46510.1 | 29.444 | 180 | 102 | 6 | 116 | 286 | 371 | 534 | 1.30e-16 | 80.9 |
| Msa0218140 | AT1G01260.1 | 35.417 | 144 | 73 | 3 | 136 | 279 | 437 | 560 | 1.84e-15 | 77.4 |
| Msa0218140 | AT1G01260.2 | 35.417 | 144 | 73 | 3 | 136 | 279 | 437 | 560 | 1.84e-15 | 77.4 |
| Msa0218140 | AT1G01260.3 | 35.417 | 144 | 73 | 3 | 136 | 279 | 437 | 560 | 1.84e-15 | 77.4 |
| Msa0218140 | AT4G29930.4 | 36.275 | 102 | 50 | 1 | 99 | 200 | 36 | 122 | 4.95e-15 | 72.4 |
| Msa0218140 | AT4G17880.1 | 28.667 | 150 | 101 | 4 | 136 | 281 | 420 | 567 | 1.36e-14 | 74.7 |
| Msa0218140 | AT1G12860.2 | 46.970 | 66 | 35 | 0 | 131 | 196 | 266 | 331 | 4.01e-13 | 70.1 |
| Msa0218140 | AT1G12860.1 | 46.970 | 66 | 35 | 0 | 131 | 196 | 266 | 331 | 4.37e-13 | 69.7 |
| Msa0218140 | AT3G26744.6 | 29.932 | 147 | 89 | 3 | 131 | 264 | 306 | 451 | 7.25e-13 | 69.3 |
| Msa0218140 | AT3G26744.1 | 29.932 | 147 | 89 | 3 | 131 | 264 | 306 | 451 | 8.24e-13 | 69.3 |
| Msa0218140 | AT3G26744.4 | 29.932 | 147 | 89 | 3 | 131 | 264 | 306 | 451 | 8.24e-13 | 69.3 |
| Msa0218140 | AT3G26744.2 | 29.932 | 147 | 89 | 3 | 131 | 264 | 306 | 451 | 8.24e-13 | 69.3 |
| Msa0218140 | AT5G46760.1 | 29.091 | 165 | 85 | 6 | 136 | 281 | 419 | 570 | 3.10e-12 | 67.4 |
| Msa0218140 | AT1G32640.1 | 28.667 | 150 | 102 | 4 | 136 | 281 | 456 | 604 | 1.91e-11 | 65.1 |
| Msa0218140 | AT4G16430.1 | 26.875 | 160 | 98 | 4 | 80 | 220 | 259 | 418 | 9.56e-11 | 62.8 |
Find 57 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTGAATGCTGAGGTTTC+AGG | 0.231415 | 2_1:+65217599 | Msa0218140:CDS |
| TATTATGATGGAGAGGTTAA+AGG | 0.240976 | 2_1:+65217036 | Msa0218140:CDS |
| GCTTTATACATTGCGTTCTT+TGG | 0.259831 | 2_1:+65217203 | Msa0218140:CDS |
| TGGATGGCTTTGAACATTAA+TGG | 0.295160 | 2_1:-65217675 | None:intergenic |
| ATGGATAAGGCCTCTATAAT+TGG | 0.313859 | 2_1:+65217533 | Msa0218140:CDS |
| TCGATAAATTGATCAAAGTT+TGG | 0.327610 | 2_1:-65216817 | None:intergenic |
| GTCATGCAGCTCAAAGTTAT+TGG | 0.328211 | 2_1:-65216782 | None:intergenic |
| CTAATTACCTTTGTAATGTT+GGG | 0.360034 | 2_1:-65217228 | None:intergenic |
| ACTAATTACCTTTGTAATGT+TGG | 0.365158 | 2_1:-65217229 | None:intergenic |
| ACTTCCTAGCTTGTGCTTGA+AGG | 0.382012 | 2_1:-65217580 | None:intergenic |
| ACCTTCAAAATTTGAAGCTA+TGG | 0.386796 | 2_1:+65218480 | Msa0218140:CDS |
| GAGCCAATTGTTGTAGGGCT+TGG | 0.390918 | 2_1:-65217006 | None:intergenic |
| TTGGAGGAATTGAAAGAAGT+TGG | 0.405788 | 2_1:-65216924 | None:intergenic |
| GGCTCCTTCTCTTATTATGA+TGG | 0.412262 | 2_1:+65217024 | Msa0218140:CDS |
| CAATTTATCGATTTAATTCG+AGG | 0.430612 | 2_1:+65216829 | Msa0218140:CDS |
| AATCCAAGCCCTACAACAAT+TGG | 0.433423 | 2_1:+65217003 | Msa0218140:CDS |
| TTGTGATCAAATGATGGGTT+TGG | 0.447521 | 2_1:-65216943 | None:intergenic |
| CTGAGAGGAGAAGGAGAGGA+AGG | 0.455802 | 2_1:+65217169 | Msa0218140:CDS |
| GAGAAGGAGCCAATTGTTGT+AGG | 0.465494 | 2_1:-65217012 | None:intergenic |
| GAGAAGGAGAGGAAGGATGA+AGG | 0.465670 | 2_1:+65217176 | Msa0218140:CDS |
| ATAGGTAAACGGTTCTGAAC+CGG | 0.467631 | 2_1:+65218451 | Msa0218140:intron |
| GAAGATGCAATATCTAACTT+TGG | 0.473277 | 2_1:+65216859 | Msa0218140:CDS |
| CCTTCAAAATTTGAAGCTAT+GGG | 0.474141 | 2_1:+65218481 | Msa0218140:CDS |
| CTCTCATTTCTGAGAGGAGA+AGG | 0.475201 | 2_1:+65217160 | Msa0218140:CDS |
| CCTCTCAGAAATGAGAGTCT+TGG | 0.475407 | 2_1:-65217154 | None:intergenic |
| AATTTGCAAGAAAATTATCC+AGG | 0.484959 | 2_1:+65217697 | Msa0218140:CDS |
| TCAGTGTCTGAAAATTATCA+AGG | 0.485823 | 2_1:+65217638 | Msa0218140:CDS |
| TTGTTGTTGTGATCAAATGA+TGG | 0.487648 | 2_1:-65216949 | None:intergenic |
| GATGGAGAGGTTAAAGGAGA+AGG | 0.491246 | 2_1:+65217042 | Msa0218140:CDS |
| CAATGAAGCAATCATTGATA+AGG | 0.492027 | 2_1:-65216888 | None:intergenic |
| ATGGCATGAATTCAAAGCCT+TGG | 0.500719 | 2_1:-65218523 | None:intergenic |
| CATGCAGTGGCTCAAAATGA+TGG | 0.501968 | 2_1:-65218542 | None:intergenic |
| AGAAGGAGCCAATTGTTGTA+GGG | 0.509001 | 2_1:-65217011 | None:intergenic |
| TATCCACATACAGATGGATA+AGG | 0.511962 | 2_1:+65217520 | Msa0218140:intron |
| TGATCGATGATGCCAACCCT+AGG | 0.520450 | 2_1:+65217115 | Msa0218140:CDS |
| AAAGGAGAAGGAGAAAATGA+TGG | 0.542463 | 2_1:+65217054 | Msa0218140:CDS |
| GAAGGAGAAAATGATGGAGG+TGG | 0.543991 | 2_1:+65217060 | Msa0218140:CDS |
| ATGTTTCAAGTAGAGGAAAG+AGG | 0.546448 | 2_1:+65218178 | Msa0218140:CDS |
| TGATCAAATGATGGGTTTGG+AGG | 0.549959 | 2_1:-65216940 | None:intergenic |
| CTTCTCTTATTATGATGGAG+AGG | 0.551672 | 2_1:+65217029 | Msa0218140:CDS |
| ACCCTAGGGCTAAAACTGAT+AGG | 0.553134 | 2_1:+65217130 | Msa0218140:CDS |
| GATGGACATGTTTCAAGTAG+AGG | 0.555283 | 2_1:+65218171 | Msa0218140:intron |
| AATTTGAAGCTATGGGTGGC+TGG | 0.562736 | 2_1:+65218488 | Msa0218140:CDS |
| TACTGCGTCTCCAATTATAG+AGG | 0.562918 | 2_1:-65217543 | None:intergenic |
| GGTGTTCTCTAGTGAGTCCA+TGG | 0.563816 | 2_1:-65216761 | None:intergenic |
| ATGACCTTCAAGCACAAGCT+AGG | 0.564350 | 2_1:+65217576 | Msa0218140:CDS |
| ATAATGTGCAATAAAGGAGA+AGG | 0.570295 | 2_1:+65218214 | Msa0218140:CDS |
| AGTAGCTGCTTCATTGTACA+AGG | 0.575970 | 2_1:+65218237 | Msa0218140:CDS |
| TGTTGTTGTGATCAAATGAT+GGG | 0.582900 | 2_1:-65216948 | None:intergenic |
| CTCTCCATCATAATAAGAGA+AGG | 0.586757 | 2_1:-65217028 | None:intergenic |
| ATTTCTGAGAGGAGAAGGAG+AGG | 0.591195 | 2_1:+65217165 | Msa0218140:CDS |
| TTTGGTTCCCAACATTACAA+AGG | 0.593392 | 2_1:+65217221 | Msa0218140:CDS |
| GGAGAAGGAGAAAATGATGG+AGG | 0.607003 | 2_1:+65217057 | Msa0218140:CDS |
| AGCTAGGAAGTTGAATGCTG+AGG | 0.609235 | 2_1:+65217592 | Msa0218140:CDS |
| TCAAAATTTGAAGCTATGGG+TGG | 0.609799 | 2_1:+65218484 | Msa0218140:CDS |
| GATCGATGATGCCAACCCTA+GGG | 0.620243 | 2_1:+65217116 | Msa0218140:CDS |
| CCAAGACTCTCATTTCTGAG+AGG | 0.669057 | 2_1:+65217154 | Msa0218140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAATTATAATTAGTTTTTA+AGG | - | chr2_1:65217320-65217339 | None:intergenic | 10.0% |
| !!! | AAAGTTTTTTCTTTATTATA+TGG | - | chr2_1:65217801-65217820 | None:intergenic | 10.0% |
| !!! | CTAATTATAATTAGTTTTTA+AGG | - | chr2_1:65217320-65217339 | None:intergenic | 10.0% |
| !!! | AAAGTTTTTTCTTTATTATA+TGG | - | chr2_1:65217801-65217820 | None:intergenic | 10.0% |
| !!! | TTGTAATTTTCTATCTTTTT+TGG | - | chr2_1:65218029-65218048 | None:intergenic | 15.0% |
| !!! | AATTCATTGATTAATGATTA+GGG | + | chr2_1:65218377-65218396 | Msa0218140:intron | 15.0% |
| !!! | TTGTAATTTTCTATCTTTTT+TGG | - | chr2_1:65218029-65218048 | None:intergenic | 15.0% |
| !!! | AATTCATTGATTAATGATTA+GGG | + | chr2_1:65218377-65218396 | Msa0218140:intron | 15.0% |
| !! | TTCGAAATTAATCGAAATAA+AGG | - | chr2_1:65217257-65217276 | None:intergenic | 20.0% |
| !!! | AAGTTGCAAAGATATAATTT+TGG | + | chr2_1:65217362-65217381 | Msa0218140:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGCACTAG+AGG | + | chr2_1:65217405-65217424 | Msa0218140:intron | 20.0% |
| !!! | ATATGCTTGATATTAATTTG+AGG | + | chr2_1:65217459-65217478 | Msa0218140:intron | 20.0% |
| !! | AATGAAAAATTAAACAAACC+TGG | - | chr2_1:65217718-65217737 | None:intergenic | 20.0% |
| !!! | AAAAATGTTGGTTTAAGATA+AGG | - | chr2_1:65217865-65217884 | None:intergenic | 20.0% |
| !!! | TAATTTTCTATCTTTTTTGG+TGG | - | chr2_1:65218026-65218045 | None:intergenic | 20.0% |
| !! | AGATAGAAAATTACAAACAA+AGG | + | chr2_1:65218033-65218052 | Msa0218140:intron | 20.0% |
| !! | CTAATCATTAATCAATGAAT+TGG | - | chr2_1:65218378-65218397 | None:intergenic | 20.0% |
| !!! | CAATTCATTGATTAATGATT+AGG | + | chr2_1:65218376-65218395 | Msa0218140:intron | 20.0% |
| !! | ATTGATGTGTTGAAAAATAT+AGG | + | chr2_1:65218433-65218452 | Msa0218140:intron | 20.0% |
| !! | TGTTGAAAAATATAGGTAAA+CGG | + | chr2_1:65218440-65218459 | Msa0218140:intron | 20.0% |
| !! | TTCGAAATTAATCGAAATAA+AGG | - | chr2_1:65217257-65217276 | None:intergenic | 20.0% |
| !!! | AAGTTGCAAAGATATAATTT+TGG | + | chr2_1:65217362-65217381 | Msa0218140:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGCACTAG+AGG | + | chr2_1:65217405-65217424 | Msa0218140:intron | 20.0% |
| !!! | ATATGCTTGATATTAATTTG+AGG | + | chr2_1:65217459-65217478 | Msa0218140:intron | 20.0% |
| !! | AATGAAAAATTAAACAAACC+TGG | - | chr2_1:65217718-65217737 | None:intergenic | 20.0% |
| !!! | AAAAATGTTGGTTTAAGATA+AGG | - | chr2_1:65217865-65217884 | None:intergenic | 20.0% |
| !!! | TAATTTTCTATCTTTTTTGG+TGG | - | chr2_1:65218026-65218045 | None:intergenic | 20.0% |
| !! | AGATAGAAAATTACAAACAA+AGG | + | chr2_1:65218033-65218052 | Msa0218140:intron | 20.0% |
| !! | CTAATCATTAATCAATGAAT+TGG | - | chr2_1:65218378-65218397 | None:intergenic | 20.0% |
| !!! | CAATTCATTGATTAATGATT+AGG | + | chr2_1:65218376-65218395 | Msa0218140:intron | 20.0% |
| !! | ATTGATGTGTTGAAAAATAT+AGG | + | chr2_1:65218433-65218452 | Msa0218140:intron | 20.0% |
| !! | TGTTGAAAAATATAGGTAAA+CGG | + | chr2_1:65218440-65218459 | Msa0218140:intron | 20.0% |
| ! | TCGATAAATTGATCAAAGTT+TGG | - | chr2_1:65216820-65216839 | None:intergenic | 25.0% |
| !!! | CAATTTATCGATTTAATTCG+AGG | + | chr2_1:65216829-65216848 | Msa0218140:CDS | 25.0% |
| ! | CTAATTACCTTTGTAATGTT+GGG | - | chr2_1:65217231-65217250 | None:intergenic | 25.0% |
| ! | ACTAATTACCTTTGTAATGT+TGG | - | chr2_1:65217232-65217251 | None:intergenic | 25.0% |
| ! | ACTTTACATTTGCAACTTAA+GGG | - | chr2_1:65217346-65217365 | None:intergenic | 25.0% |
| ! | AACTTTACATTTGCAACTTA+AGG | - | chr2_1:65217347-65217366 | None:intergenic | 25.0% |
| ! | TTTATATATCCACATACAGA+TGG | + | chr2_1:65217514-65217533 | Msa0218140:intron | 25.0% |
| !! | TAATTTTCTTGCAAATTGGA+TGG | - | chr2_1:65217694-65217713 | None:intergenic | 25.0% |
| !! | TGGATAATTTTCTTGCAAAT+TGG | - | chr2_1:65217698-65217717 | None:intergenic | 25.0% |
| ! | AATTTGCAAGAAAATTATCC+AGG | + | chr2_1:65217697-65217716 | Msa0218140:CDS | 25.0% |
| ! | AGACTCATGAAATTATAACT+TGG | - | chr2_1:65217772-65217791 | None:intergenic | 25.0% |
| ! | TTGTCGTTAAGAAAAAATGT+TGG | - | chr2_1:65217877-65217896 | None:intergenic | 25.0% |
| ! | AAAAACCAACTATAAAGTGT+TGG | - | chr2_1:65218106-65218125 | None:intergenic | 25.0% |
| ! | GCAAAAATAATGTGCAATAA+AGG | + | chr2_1:65218208-65218227 | Msa0218140:CDS | 25.0% |
| !!! | GTTATTGATGTTTTTGCTTA+AGG | + | chr2_1:65218399-65218418 | Msa0218140:intron | 25.0% |
| !!! | AAATTTTGAAGGTTCATTTC+CGG | - | chr2_1:65218473-65218492 | None:intergenic | 25.0% |
| ! | TCGATAAATTGATCAAAGTT+TGG | - | chr2_1:65216820-65216839 | None:intergenic | 25.0% |
| !!! | CAATTTATCGATTTAATTCG+AGG | + | chr2_1:65216829-65216848 | Msa0218140:CDS | 25.0% |
| ! | CTAATTACCTTTGTAATGTT+GGG | - | chr2_1:65217231-65217250 | None:intergenic | 25.0% |
| ! | ACTAATTACCTTTGTAATGT+TGG | - | chr2_1:65217232-65217251 | None:intergenic | 25.0% |
| ! | ACTTTACATTTGCAACTTAA+GGG | - | chr2_1:65217346-65217365 | None:intergenic | 25.0% |
| ! | AACTTTACATTTGCAACTTA+AGG | - | chr2_1:65217347-65217366 | None:intergenic | 25.0% |
| ! | TTTATATATCCACATACAGA+TGG | + | chr2_1:65217514-65217533 | Msa0218140:intron | 25.0% |
| !! | TAATTTTCTTGCAAATTGGA+TGG | - | chr2_1:65217694-65217713 | None:intergenic | 25.0% |
| !! | TGGATAATTTTCTTGCAAAT+TGG | - | chr2_1:65217698-65217717 | None:intergenic | 25.0% |
| ! | AATTTGCAAGAAAATTATCC+AGG | + | chr2_1:65217697-65217716 | Msa0218140:CDS | 25.0% |
| ! | AGACTCATGAAATTATAACT+TGG | - | chr2_1:65217772-65217791 | None:intergenic | 25.0% |
| ! | TTGTCGTTAAGAAAAAATGT+TGG | - | chr2_1:65217877-65217896 | None:intergenic | 25.0% |
| ! | AAAAACCAACTATAAAGTGT+TGG | - | chr2_1:65218106-65218125 | None:intergenic | 25.0% |
| ! | GCAAAAATAATGTGCAATAA+AGG | + | chr2_1:65218208-65218227 | Msa0218140:CDS | 25.0% |
| !!! | GTTATTGATGTTTTTGCTTA+AGG | + | chr2_1:65218399-65218418 | Msa0218140:intron | 25.0% |
| !!! | AAATTTTGAAGGTTCATTTC+CGG | - | chr2_1:65218473-65218492 | None:intergenic | 25.0% |
| GAAGATGCAATATCTAACTT+TGG | + | chr2_1:65216859-65216878 | Msa0218140:CDS | 30.0% | |
| CAATGAAGCAATCATTGATA+AGG | - | chr2_1:65216891-65216910 | None:intergenic | 30.0% | |
| TGTTGTTGTGATCAAATGAT+GGG | - | chr2_1:65216951-65216970 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTGATCAAATGA+TGG | - | chr2_1:65216952-65216971 | None:intergenic | 30.0% |
| ! | TATTATGATGGAGAGGTTAA+AGG | + | chr2_1:65217036-65217055 | Msa0218140:CDS | 30.0% |
| !!! | TTTTTTTTGCACTAGAGGTT+AGG | + | chr2_1:65217410-65217429 | Msa0218140:intron | 30.0% |
| !!! | TTTTTTTGCACTAGAGGTTA+GGG | + | chr2_1:65217411-65217430 | Msa0218140:intron | 30.0% |
| TCAGTGTCTGAAAATTATCA+AGG | + | chr2_1:65217638-65217657 | Msa0218140:CDS | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr2_1:65217978-65217997 | Msa0218140:intron | 30.0% | |
| AAACAAAGGACATCGTATAT+AGG | + | chr2_1:65218047-65218066 | Msa0218140:intron | 30.0% | |
| TTAGACCAACACTTTATAGT+TGG | + | chr2_1:65218098-65218117 | Msa0218140:intron | 30.0% | |
| ATAATGTGCAATAAAGGAGA+AGG | + | chr2_1:65218214-65218233 | Msa0218140:CDS | 30.0% | |
| TCAATGAATTGGATATTGAG+AGG | - | chr2_1:65218367-65218386 | None:intergenic | 30.0% | |
| ! | ACCTTCAAAATTTGAAGCTA+TGG | + | chr2_1:65218480-65218499 | Msa0218140:CDS | 30.0% |
| ! | CCTTCAAAATTTGAAGCTAT+GGG | + | chr2_1:65218481-65218500 | Msa0218140:CDS | 30.0% |
| GAAGATGCAATATCTAACTT+TGG | + | chr2_1:65216859-65216878 | Msa0218140:CDS | 30.0% | |
| CAATGAAGCAATCATTGATA+AGG | - | chr2_1:65216891-65216910 | None:intergenic | 30.0% | |
| TGTTGTTGTGATCAAATGAT+GGG | - | chr2_1:65216951-65216970 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTGATCAAATGA+TGG | - | chr2_1:65216952-65216971 | None:intergenic | 30.0% |
| ! | TATTATGATGGAGAGGTTAA+AGG | + | chr2_1:65217036-65217055 | Msa0218140:CDS | 30.0% |
| !!! | TTTTTTTTGCACTAGAGGTT+AGG | + | chr2_1:65217410-65217429 | Msa0218140:intron | 30.0% |
| !!! | TTTTTTTGCACTAGAGGTTA+GGG | + | chr2_1:65217411-65217430 | Msa0218140:intron | 30.0% |
| TCAGTGTCTGAAAATTATCA+AGG | + | chr2_1:65217638-65217657 | Msa0218140:CDS | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr2_1:65217978-65217997 | Msa0218140:intron | 30.0% | |
| AAACAAAGGACATCGTATAT+AGG | + | chr2_1:65218047-65218066 | Msa0218140:intron | 30.0% | |
| TTAGACCAACACTTTATAGT+TGG | + | chr2_1:65218098-65218117 | Msa0218140:intron | 30.0% | |
| ATAATGTGCAATAAAGGAGA+AGG | + | chr2_1:65218214-65218233 | Msa0218140:CDS | 30.0% | |
| TCAATGAATTGGATATTGAG+AGG | - | chr2_1:65218367-65218386 | None:intergenic | 30.0% | |
| ! | ACCTTCAAAATTTGAAGCTA+TGG | + | chr2_1:65218480-65218499 | Msa0218140:CDS | 30.0% |
| ! | CCTTCAAAATTTGAAGCTAT+GGG | + | chr2_1:65218481-65218500 | Msa0218140:CDS | 30.0% |
| TTGGAGGAATTGAAAGAAGT+TGG | - | chr2_1:65216927-65216946 | None:intergenic | 35.0% | |
| !! | TTGTGATCAAATGATGGGTT+TGG | - | chr2_1:65216946-65216965 | None:intergenic | 35.0% |
| CTCTCCATCATAATAAGAGA+AGG | - | chr2_1:65217031-65217050 | None:intergenic | 35.0% | |
| ! | CTTCTCTTATTATGATGGAG+AGG | + | chr2_1:65217029-65217048 | Msa0218140:CDS | 35.0% |
| AAAGGAGAAGGAGAAAATGA+TGG | + | chr2_1:65217054-65217073 | Msa0218140:CDS | 35.0% | |
| GCTTTATACATTGCGTTCTT+TGG | + | chr2_1:65217203-65217222 | Msa0218140:CDS | 35.0% | |
| ! | TTTGGTTCCCAACATTACAA+AGG | + | chr2_1:65217221-65217240 | Msa0218140:CDS | 35.0% |
| TATCCACATACAGATGGATA+AGG | + | chr2_1:65217520-65217539 | Msa0218140:intron | 35.0% | |
| ATGGATAAGGCCTCTATAAT+TGG | + | chr2_1:65217533-65217552 | Msa0218140:CDS | 35.0% | |
| !! | TGGATGGCTTTGAACATTAA+TGG | - | chr2_1:65217678-65217697 | None:intergenic | 35.0% |
| TGCATAATATATGCAAGGTC+TGG | + | chr2_1:65217983-65218002 | Msa0218140:intron | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | + | chr2_1:65217984-65218003 | Msa0218140:intron | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | + | chr2_1:65217985-65218004 | Msa0218140:intron | 35.0% | |
| TGTGCATTATGCTATGTAGA+TGG | + | chr2_1:65218153-65218172 | Msa0218140:intron | 35.0% | |
| ! | ATGTTTCAAGTAGAGGAAAG+AGG | + | chr2_1:65218178-65218197 | Msa0218140:CDS | 35.0% |
| ! | CCCATAGCTTCAAATTTTGA+AGG | - | chr2_1:65218484-65218503 | None:intergenic | 35.0% |
| ! | TCAAAATTTGAAGCTATGGG+TGG | + | chr2_1:65218484-65218503 | Msa0218140:CDS | 35.0% |
| TTGGAGGAATTGAAAGAAGT+TGG | - | chr2_1:65216927-65216946 | None:intergenic | 35.0% | |
| !! | TTGTGATCAAATGATGGGTT+TGG | - | chr2_1:65216946-65216965 | None:intergenic | 35.0% |
| CTCTCCATCATAATAAGAGA+AGG | - | chr2_1:65217031-65217050 | None:intergenic | 35.0% | |
| ! | CTTCTCTTATTATGATGGAG+AGG | + | chr2_1:65217029-65217048 | Msa0218140:CDS | 35.0% |
| AAAGGAGAAGGAGAAAATGA+TGG | + | chr2_1:65217054-65217073 | Msa0218140:CDS | 35.0% | |
| GCTTTATACATTGCGTTCTT+TGG | + | chr2_1:65217203-65217222 | Msa0218140:CDS | 35.0% | |
| ! | TTTGGTTCCCAACATTACAA+AGG | + | chr2_1:65217221-65217240 | Msa0218140:CDS | 35.0% |
| TATCCACATACAGATGGATA+AGG | + | chr2_1:65217520-65217539 | Msa0218140:intron | 35.0% | |
| ATGGATAAGGCCTCTATAAT+TGG | + | chr2_1:65217533-65217552 | Msa0218140:CDS | 35.0% | |
| !! | TGGATGGCTTTGAACATTAA+TGG | - | chr2_1:65217678-65217697 | None:intergenic | 35.0% |
| TGCATAATATATGCAAGGTC+TGG | + | chr2_1:65217983-65218002 | Msa0218140:intron | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | + | chr2_1:65217984-65218003 | Msa0218140:intron | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | + | chr2_1:65217985-65218004 | Msa0218140:intron | 35.0% | |
| TGTGCATTATGCTATGTAGA+TGG | + | chr2_1:65218153-65218172 | Msa0218140:intron | 35.0% | |
| ! | ATGTTTCAAGTAGAGGAAAG+AGG | + | chr2_1:65218178-65218197 | Msa0218140:CDS | 35.0% |
| ! | CCCATAGCTTCAAATTTTGA+AGG | - | chr2_1:65218484-65218503 | None:intergenic | 35.0% |
| ! | TCAAAATTTGAAGCTATGGG+TGG | + | chr2_1:65218484-65218503 | Msa0218140:CDS | 35.0% |
| GTCATGCAGCTCAAAGTTAT+TGG | - | chr2_1:65216785-65216804 | None:intergenic | 40.0% | |
| !! | TGATCAAATGATGGGTTTGG+AGG | - | chr2_1:65216943-65216962 | None:intergenic | 40.0% |
| AATCCAAGCCCTACAACAAT+TGG | + | chr2_1:65217003-65217022 | Msa0218140:CDS | 40.0% | |
| AGAAGGAGCCAATTGTTGTA+GGG | - | chr2_1:65217014-65217033 | None:intergenic | 40.0% | |
| GGCTCCTTCTCTTATTATGA+TGG | + | chr2_1:65217024-65217043 | Msa0218140:CDS | 40.0% | |
| !! | ACCTATCAGTTTTAGCCCTA+GGG | - | chr2_1:65217134-65217153 | None:intergenic | 40.0% |
| TACTGCGTCTCCAATTATAG+AGG | - | chr2_1:65217546-65217565 | None:intergenic | 40.0% | |
| AAGTTGAATGCTGAGGTTTC+AGG | + | chr2_1:65217599-65217618 | Msa0218140:CDS | 40.0% | |
| !!! | ATCTTTTTTGGTGGTGTCCA+GGG | - | chr2_1:65218017-65218036 | None:intergenic | 40.0% |
| !!! | TATCTTTTTTGGTGGTGTCC+AGG | - | chr2_1:65218018-65218037 | None:intergenic | 40.0% |
| CAAAGGACATCGTATATAGG+CGG | + | chr2_1:65218050-65218069 | Msa0218140:intron | 40.0% | |
| ! | GATGGACATGTTTCAAGTAG+AGG | + | chr2_1:65218171-65218190 | Msa0218140:intron | 40.0% |
| AGTAGCTGCTTCATTGTACA+AGG | + | chr2_1:65218237-65218256 | Msa0218140:CDS | 40.0% | |
| !! | ATAGGTAAACGGTTCTGAAC+CGG | + | chr2_1:65218451-65218470 | Msa0218140:intron | 40.0% |
| ATGGCATGAATTCAAAGCCT+TGG | - | chr2_1:65218526-65218545 | None:intergenic | 40.0% | |
| GTCATGCAGCTCAAAGTTAT+TGG | - | chr2_1:65216785-65216804 | None:intergenic | 40.0% | |
| !! | TGATCAAATGATGGGTTTGG+AGG | - | chr2_1:65216943-65216962 | None:intergenic | 40.0% |
| AATCCAAGCCCTACAACAAT+TGG | + | chr2_1:65217003-65217022 | Msa0218140:CDS | 40.0% | |
| AGAAGGAGCCAATTGTTGTA+GGG | - | chr2_1:65217014-65217033 | None:intergenic | 40.0% | |
| GGCTCCTTCTCTTATTATGA+TGG | + | chr2_1:65217024-65217043 | Msa0218140:CDS | 40.0% | |
| !! | ACCTATCAGTTTTAGCCCTA+GGG | - | chr2_1:65217134-65217153 | None:intergenic | 40.0% |
| TACTGCGTCTCCAATTATAG+AGG | - | chr2_1:65217546-65217565 | None:intergenic | 40.0% | |
| AAGTTGAATGCTGAGGTTTC+AGG | + | chr2_1:65217599-65217618 | Msa0218140:CDS | 40.0% | |
| !!! | ATCTTTTTTGGTGGTGTCCA+GGG | - | chr2_1:65218017-65218036 | None:intergenic | 40.0% |
| !!! | TATCTTTTTTGGTGGTGTCC+AGG | - | chr2_1:65218018-65218037 | None:intergenic | 40.0% |
| CAAAGGACATCGTATATAGG+CGG | + | chr2_1:65218050-65218069 | Msa0218140:intron | 40.0% | |
| ! | GATGGACATGTTTCAAGTAG+AGG | + | chr2_1:65218171-65218190 | Msa0218140:intron | 40.0% |
| AGTAGCTGCTTCATTGTACA+AGG | + | chr2_1:65218237-65218256 | Msa0218140:CDS | 40.0% | |
| !! | ATAGGTAAACGGTTCTGAAC+CGG | + | chr2_1:65218451-65218470 | Msa0218140:intron | 40.0% |
| ATGGCATGAATTCAAAGCCT+TGG | - | chr2_1:65218526-65218545 | None:intergenic | 40.0% | |
| GAGAAGGAGCCAATTGTTGT+AGG | - | chr2_1:65217015-65217034 | None:intergenic | 45.0% | |
| GATGGAGAGGTTAAAGGAGA+AGG | + | chr2_1:65217042-65217061 | Msa0218140:CDS | 45.0% | |
| GGAGAAGGAGAAAATGATGG+AGG | + | chr2_1:65217057-65217076 | Msa0218140:CDS | 45.0% | |
| ! | GAAGGAGAAAATGATGGAGG+TGG | + | chr2_1:65217060-65217079 | Msa0218140:CDS | 45.0% |
| !! | ATCAGTTTTAGCCCTAGGGT+TGG | - | chr2_1:65217130-65217149 | None:intergenic | 45.0% |
| ACCCTAGGGCTAAAACTGAT+AGG | + | chr2_1:65217130-65217149 | Msa0218140:CDS | 45.0% | |
| !! | GACCTATCAGTTTTAGCCCT+AGG | - | chr2_1:65217135-65217154 | None:intergenic | 45.0% |
| CCTCTCAGAAATGAGAGTCT+TGG | - | chr2_1:65217157-65217176 | None:intergenic | 45.0% | |
| CCAAGACTCTCATTTCTGAG+AGG | + | chr2_1:65217154-65217173 | Msa0218140:CDS | 45.0% | |
| ! | CTCTCATTTCTGAGAGGAGA+AGG | + | chr2_1:65217160-65217179 | Msa0218140:CDS | 45.0% |
| ! | ATTTCTGAGAGGAGAAGGAG+AGG | + | chr2_1:65217165-65217184 | Msa0218140:CDS | 45.0% |
| ! | AGGCCTTATCCATCTGTATG+TGG | - | chr2_1:65217526-65217545 | None:intergenic | 45.0% |
| ATGACCTTCAAGCACAAGCT+AGG | + | chr2_1:65217576-65217595 | Msa0218140:CDS | 45.0% | |
| ! | ACTTCCTAGCTTGTGCTTGA+AGG | - | chr2_1:65217583-65217602 | None:intergenic | 45.0% |
| AGCTAGGAAGTTGAATGCTG+AGG | + | chr2_1:65217592-65217611 | Msa0218140:CDS | 45.0% | |
| ATTCGTCTTGTGCAGAGACT+TGG | - | chr2_1:65217913-65217932 | None:intergenic | 45.0% | |
| GCTCACGGGAACTATCTTAT+TGG | - | chr2_1:65217941-65217960 | None:intergenic | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | - | chr2_1:65217956-65217975 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr2_1:65217956-65217975 | Msa0218140:intron | 45.0% |
| ! | AATTTGAAGCTATGGGTGGC+TGG | + | chr2_1:65218488-65218507 | Msa0218140:CDS | 45.0% |
| GAGAAGGAGCCAATTGTTGT+AGG | - | chr2_1:65217015-65217034 | None:intergenic | 45.0% | |
| GATGGAGAGGTTAAAGGAGA+AGG | + | chr2_1:65217042-65217061 | Msa0218140:CDS | 45.0% | |
| GGAGAAGGAGAAAATGATGG+AGG | + | chr2_1:65217057-65217076 | Msa0218140:CDS | 45.0% | |
| ! | GAAGGAGAAAATGATGGAGG+TGG | + | chr2_1:65217060-65217079 | Msa0218140:CDS | 45.0% |
| !! | ATCAGTTTTAGCCCTAGGGT+TGG | - | chr2_1:65217130-65217149 | None:intergenic | 45.0% |
| ACCCTAGGGCTAAAACTGAT+AGG | + | chr2_1:65217130-65217149 | Msa0218140:CDS | 45.0% | |
| !! | GACCTATCAGTTTTAGCCCT+AGG | - | chr2_1:65217135-65217154 | None:intergenic | 45.0% |
| CCTCTCAGAAATGAGAGTCT+TGG | - | chr2_1:65217157-65217176 | None:intergenic | 45.0% | |
| CCAAGACTCTCATTTCTGAG+AGG | + | chr2_1:65217154-65217173 | Msa0218140:CDS | 45.0% | |
| ! | CTCTCATTTCTGAGAGGAGA+AGG | + | chr2_1:65217160-65217179 | Msa0218140:CDS | 45.0% |
| ! | ATTTCTGAGAGGAGAAGGAG+AGG | + | chr2_1:65217165-65217184 | Msa0218140:CDS | 45.0% |
| ! | AGGCCTTATCCATCTGTATG+TGG | - | chr2_1:65217526-65217545 | None:intergenic | 45.0% |
| ATGACCTTCAAGCACAAGCT+AGG | + | chr2_1:65217576-65217595 | Msa0218140:CDS | 45.0% | |
| ! | ACTTCCTAGCTTGTGCTTGA+AGG | - | chr2_1:65217583-65217602 | None:intergenic | 45.0% |
| AGCTAGGAAGTTGAATGCTG+AGG | + | chr2_1:65217592-65217611 | Msa0218140:CDS | 45.0% | |
| ATTCGTCTTGTGCAGAGACT+TGG | - | chr2_1:65217913-65217932 | None:intergenic | 45.0% | |
| GCTCACGGGAACTATCTTAT+TGG | - | chr2_1:65217941-65217960 | None:intergenic | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | - | chr2_1:65217956-65217975 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr2_1:65217956-65217975 | Msa0218140:intron | 45.0% |
| ! | AATTTGAAGCTATGGGTGGC+TGG | + | chr2_1:65218488-65218507 | Msa0218140:CDS | 45.0% |
| !!! | TAATTATAATTAGTTTTTAA+GGG | - | chr2_1:65217319-65217338 | None:intergenic | 5.0% |
| !!! | TAATTATAATTAGTTTTTAA+GGG | - | chr2_1:65217319-65217338 | None:intergenic | 5.0% |
| GAGCCAATTGTTGTAGGGCT+TGG | - | chr2_1:65217009-65217028 | None:intergenic | 50.0% | |
| TGATCGATGATGCCAACCCT+AGG | + | chr2_1:65217115-65217134 | Msa0218140:CDS | 50.0% | |
| GATCGATGATGCCAACCCTA+GGG | + | chr2_1:65217116-65217135 | Msa0218140:CDS | 50.0% | |
| GAGAAGGAGAGGAAGGATGA+AGG | + | chr2_1:65217176-65217195 | Msa0218140:CDS | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | - | chr2_1:65217955-65217974 | None:intergenic | 50.0% | |
| ! | GCTGGTGCTCTTTTGAACCA+AGG | + | chr2_1:65218506-65218525 | Msa0218140:CDS | 50.0% |
| GAGCCAATTGTTGTAGGGCT+TGG | - | chr2_1:65217009-65217028 | None:intergenic | 50.0% | |
| TGATCGATGATGCCAACCCT+AGG | + | chr2_1:65217115-65217134 | Msa0218140:CDS | 50.0% | |
| GATCGATGATGCCAACCCTA+GGG | + | chr2_1:65217116-65217135 | Msa0218140:CDS | 50.0% | |
| GAGAAGGAGAGGAAGGATGA+AGG | + | chr2_1:65217176-65217195 | Msa0218140:CDS | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | - | chr2_1:65217955-65217974 | None:intergenic | 50.0% | |
| ! | GCTGGTGCTCTTTTGAACCA+AGG | + | chr2_1:65218506-65218525 | Msa0218140:CDS | 50.0% |
| CTGAGAGGAGAAGGAGAGGA+AGG | + | chr2_1:65217169-65217188 | Msa0218140:CDS | 55.0% | |
| TCCCGTGAGCTTAGCTCAGT+TGG | + | chr2_1:65217951-65217970 | Msa0218140:intron | 55.0% | |
| CTGAGAGGAGAAGGAGAGGA+AGG | + | chr2_1:65217169-65217188 | Msa0218140:CDS | 55.0% | |
| TCCCGTGAGCTTAGCTCAGT+TGG | + | chr2_1:65217951-65217970 | Msa0218140:intron | 55.0% | |
| ! | AAGGTCTGGGGTTCGAACCC+TGG | + | chr2_1:65217997-65218016 | Msa0218140:intron | 60.0% |
| ! | AAGGTCTGGGGTTCGAACCC+TGG | + | chr2_1:65217997-65218016 | Msa0218140:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 65216763 | 65218553 | 65216763 | ID=Msa0218140;Name=Msa0218140 |
| chr2_1 | mRNA | 65216763 | 65218553 | 65216763 | ID=Msa0218140-mRNA-1;Parent=Msa0218140;Name=Msa0218140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|4|0|312 |
| chr2_1 | exon | 65216763 | 65217242 | 65216763 | ID=Msa0218140-mRNA-1:exon:18119;Parent=Msa0218140-mRNA-1 |
| chr2_1 | exon | 65217533 | 65217718 | 65217533 | ID=Msa0218140-mRNA-1:exon:18120;Parent=Msa0218140-mRNA-1 |
| chr2_1 | exon | 65218172 | 65218345 | 65218172 | ID=Msa0218140-mRNA-1:exon:18121;Parent=Msa0218140-mRNA-1 |
| chr2_1 | exon | 65218455 | 65218553 | 65218455 | ID=Msa0218140-mRNA-1:exon:18122;Parent=Msa0218140-mRNA-1 |
| chr2_1 | CDS | 65216763 | 65217242 | 65216763 | ID=Msa0218140-mRNA-1:cds;Parent=Msa0218140-mRNA-1 |
| chr2_1 | CDS | 65217533 | 65217718 | 65217533 | ID=Msa0218140-mRNA-1:cds;Parent=Msa0218140-mRNA-1 |
| chr2_1 | CDS | 65218172 | 65218345 | 65218172 | ID=Msa0218140-mRNA-1:cds;Parent=Msa0218140-mRNA-1 |
| chr2_1 | CDS | 65218455 | 65218553 | 65218455 | ID=Msa0218140-mRNA-1:cds;Parent=Msa0218140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
