Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937810 | sp|Q9RB36|TRUB_FLAJ1 | 47.753 | 178 | 89 | 2 | 1 | 177 | 54 | 228 | 5.91e-51 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937810 | A0A2K3PIM9 | 97.253 | 182 | 5 | 0 | 1 | 182 | 123 | 304 | 1.41e-127 | 370 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024680 | Msa0937810 | 0.808676 | 2.754721e-50 | -8.615850e-47 |
| Msa0030310 | Msa0937810 | 0.800133 | 1.662874e-48 | -8.615850e-47 |
| Msa0032840 | Msa0937810 | -0.841230 | 5.388781e-58 | -8.615850e-47 |
| Msa0044020 | Msa0937810 | 0.804927 | 1.707522e-49 | -8.615850e-47 |
| Msa0049650 | Msa0937810 | -0.802528 | 5.374458e-49 | -8.615850e-47 |
| Msa0084650 | Msa0937810 | 0.832738 | 7.963939e-56 | -8.615850e-47 |
| Msa0090590 | Msa0937810 | 0.817310 | 3.524401e-52 | -8.615850e-47 |
| Msa0095380 | Msa0937810 | 0.821416 | 4.084929e-53 | -8.615850e-47 |
| Msa0114540 | Msa0937810 | -0.826080 | 3.300343e-54 | -8.615850e-47 |
| Msa0607200 | Msa0937810 | 0.800592 | 1.340580e-48 | -8.615850e-47 |
| Msa0618010 | Msa0937810 | 0.800181 | 1.625742e-48 | -8.615850e-47 |
| Msa0623700 | Msa0937810 | 0.803231 | 3.847042e-49 | -8.615850e-47 |
| Msa0625530 | Msa0937810 | -0.801915 | 7.187674e-49 | -8.615850e-47 |
| Msa0627910 | Msa0937810 | 0.805100 | 1.571385e-49 | -8.615850e-47 |
| Msa0630720 | Msa0937810 | 0.814248 | 1.696778e-51 | -8.615850e-47 |
| Msa0638280 | Msa0937810 | 0.802931 | 4.438740e-49 | -8.615850e-47 |
| Msa0638320 | Msa0937810 | 0.813751 | 2.184078e-51 | -8.615850e-47 |
| Msa0669850 | Msa0937810 | 0.841126 | 5.739720e-58 | -8.615850e-47 |
| Msa0673010 | Msa0937810 | -0.821872 | 3.204435e-53 | -8.615850e-47 |
| Msa0677270 | Msa0937810 | 0.807718 | 4.408252e-50 | -8.615850e-47 |
| Msa0680240 | Msa0937810 | 0.807960 | 3.914882e-50 | -8.615850e-47 |
| Msa0756630 | Msa0937810 | -0.809057 | 2.283757e-50 | -8.615850e-47 |
| Msa0813720 | Msa0937810 | 0.803053 | 4.188635e-49 | -8.615850e-47 |
| Msa0831870 | Msa0937810 | 0.827107 | 1.877891e-54 | -8.615850e-47 |
| Msa0143430 | Msa0937810 | 0.803178 | 3.945272e-49 | -8.615850e-47 |
| Msa0163550 | Msa0937810 | 0.806943 | 6.435509e-50 | -8.615850e-47 |
| Msa0183830 | Msa0937810 | 0.813125 | 2.998696e-51 | -8.615850e-47 |
| Msa0186890 | Msa0937810 | 0.800488 | 1.407568e-48 | -8.615850e-47 |
| Msa0208630 | Msa0937810 | 0.811605 | 6.439998e-51 | -8.615850e-47 |
| Msa0222920 | Msa0937810 | 0.810817 | 9.546099e-51 | -8.615850e-47 |
| Msa0230550 | Msa0937810 | -0.836703 | 8.011083e-57 | -8.615850e-47 |
| Msa0236980 | Msa0937810 | 0.800149 | 1.650463e-48 | -8.615850e-47 |
| Msa0369050 | Msa0937810 | 0.800159 | 1.642159e-48 | -8.615850e-47 |
| Msa0376510 | Msa0937810 | 0.804378 | 2.223239e-49 | -8.615850e-47 |
| Msa0380040 | Msa0937810 | 0.826619 | 2.456441e-54 | -8.615850e-47 |
| Msa0402330 | Msa0937810 | 0.804795 | 1.819429e-49 | -8.615850e-47 |
| Msa0414950 | Msa0937810 | -0.807709 | 4.427413e-50 | -8.615850e-47 |
| Msa0419820 | Msa0937810 | 0.824934 | 6.167319e-54 | -8.615850e-47 |
| Msa0425010 | Msa0937810 | 0.808449 | 3.081133e-50 | -8.615850e-47 |
| Msa0429290 | Msa0937810 | 0.836898 | 7.145637e-57 | -8.615850e-47 |
| Msa0436280 | Msa0937810 | -0.800757 | 1.240607e-48 | -8.615850e-47 |
| Msa0438210 | Msa0937810 | 0.800103 | 1.686425e-48 | -8.615850e-47 |
| Msa0457880 | Msa0937810 | 0.800662 | 1.297340e-48 | -8.615850e-47 |
| Msa0469910 | Msa0937810 | -0.800588 | 1.343370e-48 | -8.615850e-47 |
| Msa0475580 | Msa0937810 | 0.831259 | 1.847379e-55 | -8.615850e-47 |
| Msa0244270 | Msa0937810 | 0.804207 | 2.413536e-49 | -8.615850e-47 |
| Msa0259560 | Msa0937810 | 0.802729 | 4.885264e-49 | -8.615850e-47 |
| Msa0264350 | Msa0937810 | 0.801247 | 9.854077e-49 | -8.615850e-47 |
| Msa0296760 | Msa0937810 | 0.826541 | 2.563031e-54 | -8.615850e-47 |
| Msa0317250 | Msa0937810 | 0.823556 | 1.300043e-53 | -8.615850e-47 |
| Msa0332920 | Msa0937810 | 0.812528 | 4.052142e-51 | -8.615850e-47 |
| Msa0356550 | Msa0937810 | -0.807638 | 4.582834e-50 | -8.615850e-47 |
| Msa0497770 | Msa0937810 | -0.810785 | 9.697058e-51 | -8.615850e-47 |
| Msa0508630 | Msa0937810 | 0.807286 | 5.444546e-50 | -8.615850e-47 |
| Msa0509390 | Msa0937810 | 0.818035 | 2.418118e-52 | -8.615850e-47 |
| Msa0516320 | Msa0937810 | 0.805412 | 1.351784e-49 | -8.615850e-47 |
| Msa0519220 | Msa0937810 | 0.827828 | 1.260895e-54 | -8.615850e-47 |
| Msa0521880 | Msa0937810 | 0.815076 | 1.112521e-51 | -8.615850e-47 |
| Msa0526890 | Msa0937810 | 0.800335 | 1.512807e-48 | -8.615850e-47 |
| Msa0532330 | Msa0937810 | 0.815619 | 8.426752e-52 | -8.615850e-47 |
| Msa0535030 | Msa0937810 | 0.838522 | 2.735680e-57 | -8.615850e-47 |
| Msa0535060 | Msa0937810 | 0.838002 | 3.725164e-57 | -8.615850e-47 |
| Msa0591060 | Msa0937810 | 0.816514 | 5.318423e-52 | -8.615850e-47 |
| Msa0591770 | Msa0937810 | 0.837351 | 5.470621e-57 | -8.615850e-47 |
| Msa0854570 | Msa0937810 | 0.804744 | 1.865045e-49 | -8.615850e-47 |
| Msa0867050 | Msa0937810 | -0.803583 | 3.252161e-49 | -8.615850e-47 |
| Msa0883030 | Msa0937810 | 0.803015 | 4.265089e-49 | -8.615850e-47 |
| Msa0937670 | Msa0937810 | 0.917709 | 3.812611e-86 | -8.615850e-47 |
| Msa0937810 | Msa0941750 | 0.800761 | 1.238293e-48 | -8.615850e-47 |
| Msa0937810 | Msa0969400 | 0.809124 | 2.209097e-50 | -8.615850e-47 |
| Msa0937810 | Msa0969570 | 0.822671 | 2.090527e-53 | -8.615850e-47 |
| Msa0937810 | Msa0969700 | 0.810234 | 1.275897e-50 | -8.615850e-47 |
| Msa0937810 | Msa1004900 | -0.810031 | 1.410991e-50 | -8.615850e-47 |
| Msa0937810 | Msa1044340 | 0.820575 | 6.380328e-53 | -8.615850e-47 |
| Msa0937810 | Msa1082700 | 0.834632 | 2.679147e-56 | -8.615850e-47 |
| Msa0937810 | Msa1083210 | 0.812953 | 3.270066e-51 | -8.615850e-47 |
| Msa0937810 | Msa1109570 | 0.801764 | 7.720227e-49 | -8.615850e-47 |
| Msa0937810 | Msa1127830 | 0.819058 | 1.417557e-52 | -8.615850e-47 |
| Msa0937810 | Msa1129560 | 0.800359 | 1.495529e-48 | -8.615850e-47 |
| Msa0937810 | Msa1171690 | 0.807781 | 4.273757e-50 | -8.615850e-47 |
| Msa0937810 | Msa1284520 | 0.804015 | 2.646361e-49 | -8.615850e-47 |
| Msa0937810 | Msa1306430 | 0.803805 | 2.925026e-49 | -8.615850e-47 |
| Msa0937810 | Msa1373330 | 0.817983 | 2.484882e-52 | -8.615850e-47 |
| Msa0937810 | Msa1386110 | -0.801652 | 8.137784e-49 | -8.615850e-47 |
| Msa0937810 | Msa1397810 | 0.803985 | 2.683649e-49 | -8.615850e-47 |
| Msa0937810 | Msa1403930 | -0.801967 | 7.014170e-49 | -8.615850e-47 |
| Msa0937810 | Msa1410430 | -0.803739 | 3.019179e-49 | -8.615850e-47 |
| Msa0937810 | Msa1419800 | -0.807770 | 4.298348e-50 | -8.615850e-47 |
| Msa0937810 | Msa1427660 | -0.809049 | 2.292996e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937810 | MtrunA17_Chr6g0449211 | 98.901 | 182 | 2 | 0 | 1 | 182 | 391 | 572 | 1.24e-130 | 377 |
| Msa0937810 | MtrunA17_Chr4g0037641 | 28.571 | 154 | 76 | 5 | 3 | 156 | 127 | 246 | 2.27e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0937810 | AT5G14460.1 | 86.813 | 182 | 24 | 0 | 1 | 182 | 359 | 540 | 2.84e-114 | 335 |
Find 61 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATCACTCTGTGCGGATTT+TGG | 0.099638 | 6_3:-9257084 | Msa0937810:CDS |
| TCGCCTTGTCAAAGTGAAAA+AGG | 0.292477 | 6_3:-9259854 | Msa0937810:intron |
| GATAAGTTAAAGATAAGTTT+TGG | 0.332339 | 6_3:+9256760 | None:intergenic |
| CTTATCTTTAACTTATCTTC+AGG | 0.360242 | 6_3:-9256754 | Msa0937810:exon |
| AGCTACGCTCTATGTCAAAT+TGG | 0.367629 | 6_3:+9257626 | None:intergenic |
| CGTTGGCAAGTCAACAAAAC+TGG | 0.388637 | 6_3:-9259707 | Msa0937810:CDS |
| TGGACTTCATTCACAGTTTG+TGG | 0.401629 | 6_3:-9259886 | Msa0937810:five_prime_UTR |
| AGATATCAAGGGATGGTTAA+GGG | 0.418833 | 6_3:-9259537 | Msa0937810:CDS |
| TTAGAGTGACTTGTTCTAAA+GGG | 0.422161 | 6_3:-9257116 | Msa0937810:CDS |
| CAGATATCAAGGGATGGTTA+AGG | 0.429332 | 6_3:-9259538 | Msa0937810:CDS |
| ACTTACCAATTGAATCTCTT+CGG | 0.441065 | 6_3:+9256917 | None:intergenic |
| GACTTGGTGCGTAGAATTGT+CGG | 0.449462 | 6_3:-9256634 | Msa0937810:three_prime_UTR |
| CATTTATGATCTTACTAAGT+GGG | 0.454496 | 6_3:-9256594 | Msa0937810:three_prime_UTR |
| AGCCATTGGATCAAGAGTTC+CGG | 0.455220 | 6_3:+9259750 | None:intergenic |
| AAGCATATTATGGCCCTTTG+TGG | 0.460080 | 6_3:-9256684 | Msa0937810:three_prime_UTR |
| ACTCTTGATCCAATGGCTAC+TGG | 0.468893 | 6_3:-9259745 | Msa0937810:exon |
| TTAAGAGTTCATTTCTGACT+TGG | 0.482408 | 6_3:-9256650 | Msa0937810:three_prime_UTR |
| TTTAGAGTGACTTGTTCTAA+AGG | 0.482622 | 6_3:-9257117 | Msa0937810:CDS |
| TGGAAGATTGAAATTCGTCT+TGG | 0.489018 | 6_3:+9257646 | None:intergenic |
| GGGATGGTTAAGGGTTATAG+TGG | 0.489732 | 6_3:-9259528 | Msa0937810:CDS |
| TCGTCTTTGATGTGCTCCCA+TGG | 0.493556 | 6_3:+9258085 | None:intergenic |
| ATCAATAAACCAGTAGCCAT+TGG | 0.493847 | 6_3:+9259736 | None:intergenic |
| TTGCCAAATCTCCCCACAAA+AGG | 0.497675 | 6_3:+9258039 | None:intergenic |
| AAAAGTTGTATGAGAAAGCA+AGG | 0.502196 | 6_3:-9257693 | Msa0937810:CDS |
| TAGAGCGTAGCTTGGATGAC+AGG | 0.504180 | 6_3:-9257615 | Msa0937810:intron |
| TATTTACAGGTTGGGCATGC+CGG | 0.506776 | 6_3:-9259769 | Msa0937810:intron |
| GGTCATTCAGCGTGAGCCAT+GGG | 0.508339 | 6_3:-9258101 | Msa0937810:CDS |
| AATCTCTTCGGAGAGCCGTT+AGG | 0.515298 | 6_3:+9256929 | None:intergenic |
| TGCATGGGACTTTCAAGAGC+TGG | 0.515938 | 6_3:-9256795 | Msa0937810:CDS |
| TGTATGAGAAAGCAAGGAGA+GGG | 0.517131 | 6_3:-9257687 | Msa0937810:CDS |
| CTCTTCGGAGAGCCGTTAGG+TGG | 0.519359 | 6_3:+9256932 | None:intergenic |
| ATTTGACATAGAGCGTAGCT+TGG | 0.526109 | 6_3:-9257623 | Msa0937810:CDS |
| GGAAAGAGCAAACTAACAAG+TGG | 0.534816 | 6_3:+9256455 | None:intergenic |
| AATATTCAGCAGATGATGCA+TGG | 0.539686 | 6_3:-9256811 | Msa0937810:CDS |
| AGGGGAGGCTACTTCAACAT+GGG | 0.540342 | 6_3:-9259493 | Msa0937810:CDS |
| AGTCAACAAAACTGGTGGAC+AGG | 0.543352 | 6_3:-9259699 | Msa0937810:intron |
| TGCCGGAACTCTTGATCCAA+TGG | 0.547199 | 6_3:-9259752 | Msa0937810:exon |
| TCATTTATGATCTTACTAAG+TGG | 0.547227 | 6_3:-9256595 | Msa0937810:three_prime_UTR |
| GGTTTATTGATTGTTTGCGT+TGG | 0.547808 | 6_3:-9259724 | Msa0937810:CDS |
| GGATGGTTAAGGGTTATAGT+GGG | 0.548141 | 6_3:-9259527 | Msa0937810:CDS |
| GCTCTCCGAAGAGATTCAAT+TGG | 0.548644 | 6_3:-9256922 | Msa0937810:intron |
| TATGATCTTACTAAGTGGGT+CGG | 0.549768 | 6_3:-9256590 | Msa0937810:three_prime_UTR |
| TTGTAGTTGCGCCCACCTAA+CGG | 0.568022 | 6_3:-9256944 | Msa0937810:intron |
| ACTTTAATAGCAGAGAACAT+AGG | 0.569137 | 6_3:+9258010 | None:intergenic |
| GGACTTTCAAGAGCTGGAAG+AGG | 0.574710 | 6_3:-9256789 | Msa0937810:CDS |
| AGGTCATTCAGCGTGAGCCA+TGG | 0.580500 | 6_3:-9258102 | Msa0937810:CDS |
| GTATGAGAAAGCAAGGAGAG+GGG | 0.588760 | 6_3:-9257686 | Msa0937810:CDS |
| TAGGGGAGGCTACTTCAACA+TGG | 0.596980 | 6_3:-9259494 | Msa0937810:CDS |
| GAAAGAGCAAACTAACAAGT+GGG | 0.600975 | 6_3:+9256456 | None:intergenic |
| ATATTCAGCAGATGATGCAT+GGG | 0.609401 | 6_3:-9256810 | Msa0937810:CDS |
| ATGCTTCAGATATCAAGGGA+TGG | 0.611716 | 6_3:-9259544 | Msa0937810:intron |
| TCTTCGGAGAGCCGTTAGGT+GGG | 0.612060 | 6_3:+9256933 | None:intergenic |
| GATGGTTAAGGGTTATAGTG+GGG | 0.629063 | 6_3:-9259526 | Msa0937810:CDS |
| TGGCAAGTCAACAAAACTGG+TGG | 0.632066 | 6_3:-9259704 | Msa0937810:CDS |
| TTGTATGAGAAAGCAAGGAG+AGG | 0.634679 | 6_3:-9257688 | Msa0937810:CDS |
| TTGAAGTAGCCTCCCCTAAG+CGG | 0.636178 | 6_3:+9259499 | None:intergenic |
| TTAATAGCAGAGAACATAGG+TGG | 0.666040 | 6_3:+9258013 | None:intergenic |
| AATCTCCCCACAAAAGGACA+AGG | 0.707724 | 6_3:+9258045 | None:intergenic |
| AAAGAGCAAACTAACAAGTG+GGG | 0.714316 | 6_3:+9256457 | None:intergenic |
| ATGGGAGCACATCAAAGACG+AGG | 0.727299 | 6_3:-9258083 | Msa0937810:CDS |
| ATATATTCGATCACTCTGTG+CGG | 0.736006 | 6_3:-9257091 | Msa0937810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr6_3:9257077-9257096 | None:intergenic | 0.0% |
| !!! | TTAAAGTATTAATTATTTAC+AGG | - | chr6_3:9256566-9256585 | Msa0937810:three_prime_UTR | 10.0% |
| !!! | TTTAATTAAAATTTTTGATC+TGG | - | chr6_3:9256750-9256769 | Msa0937810:exon | 10.0% |
| !! | ATAATTTATTAATCCATTAA+AGG | - | chr6_3:9257319-9257338 | Msa0937810:intron | 10.0% |
| !!! | GAATTTTTACAAAAAAATAT+TGG | - | chr6_3:9257655-9257674 | Msa0937810:CDS | 10.0% |
| !!! | TTTCAAACATAATTTTTATA+AGG | + | chr6_3:9259129-9259148 | None:intergenic | 10.0% |
| !! | ATAAATTATCTTTGACAAAA+TGG | + | chr6_3:9257308-9257327 | None:intergenic | 15.0% |
| !! | TATCATATTAATAAACACAT+AGG | + | chr6_3:9257910-9257929 | None:intergenic | 15.0% |
| !! | TATTAATATGATTTGATGTT+TGG | - | chr6_3:9257944-9257963 | Msa0937810:intron | 15.0% |
| !! | CAATTTCAATATATTGAAAT+TGG | - | chr6_3:9258019-9258038 | Msa0937810:CDS | 15.0% |
| !!! | TTGATTTTAACTTCTATTAA+TGG | + | chr6_3:9258820-9258839 | None:intergenic | 15.0% |
| !! | ATATAAAATAATAATGATGG+TGG | - | chr6_3:9258860-9258879 | Msa0937810:intron | 15.0% |
| !! | TATAAAATAATAATGATGGT+GGG | - | chr6_3:9258861-9258880 | Msa0937810:intron | 15.0% |
| !! | AAAGTATAACAAATAAATCA+GGG | + | chr6_3:9259192-9259211 | None:intergenic | 15.0% |
| !!! | AAAAGTATAACAAATAAATC+AGG | + | chr6_3:9259193-9259212 | None:intergenic | 15.0% |
| !! | AAAATTAAAAATTCCACAAA+GGG | + | chr6_3:9259680-9259699 | None:intergenic | 15.0% |
| !! | TAAAATTAAAAATTCCACAA+AGG | + | chr6_3:9259681-9259700 | None:intergenic | 15.0% |
| !! | AGTATTAATTATTTACAGGT+TGG | - | chr6_3:9256570-9256589 | Msa0937810:three_prime_UTR | 20.0% |
| !! | GTATTAATTATTTACAGGTT+GGG | - | chr6_3:9256571-9256590 | Msa0937810:three_prime_UTR | 20.0% |
| !! | CACATTATATAATTAGCTAT+TGG | - | chr6_3:9256929-9256948 | Msa0937810:CDS | 20.0% |
| !! | TTATATAATTAGCTATTGGT+TGG | - | chr6_3:9256933-9256952 | Msa0937810:CDS | 20.0% |
| !! | CATACACAAGTATTATTTAT+TGG | - | chr6_3:9258066-9258085 | Msa0937810:CDS | 20.0% |
| !! | AAAATTAAATGGTTCAAGAA+TGG | + | chr6_3:9258375-9258394 | None:intergenic | 20.0% |
| !! | ACGAAACTATGAAAATTAAA+TGG | + | chr6_3:9258386-9258405 | None:intergenic | 20.0% |
| !!! | TAAATATGTCATTTCAGAAA+TGG | - | chr6_3:9258455-9258474 | Msa0937810:intron | 20.0% |
| !!! | AAGAAAAATGTTGATTACAT+AGG | + | chr6_3:9258510-9258529 | None:intergenic | 20.0% |
| !! | TATCTCAGAGAAATTAAAAA+TGG | + | chr6_3:9259024-9259043 | None:intergenic | 20.0% |
| !!! | TCTAAAAATCAAATTTTGTC+TGG | + | chr6_3:9259217-9259236 | None:intergenic | 20.0% |
| !!! | GATAAGTTAAAGATAAGTTT+TGG | + | chr6_3:9259591-9259610 | None:intergenic | 20.0% |
| !!! | ACCAATTTTTAAGCATATTA+TGG | - | chr6_3:9259654-9259673 | Msa0937810:intron | 20.0% |
| ! | TGAAATATATATGTGTACTG+TGG | + | chr6_3:9256527-9256546 | None:intergenic | 25.0% |
| ! | AAACAAAAACTGTACTATAG+TGG | + | chr6_3:9256732-9256751 | None:intergenic | 25.0% |
| !! | TTTTTATGCTTCAGATATCA+AGG | - | chr6_3:9256799-9256818 | Msa0937810:CDS | 25.0% |
| !! | TTTTATGCTTCAGATATCAA+GGG | - | chr6_3:9256800-9256819 | Msa0937810:CDS | 25.0% |
| ! | ATATATATATATATGGCGCT+AGG | + | chr6_3:9257070-9257089 | None:intergenic | 25.0% |
| !!! | CTCTATTTTAAAGTCTTGAT+AGG | + | chr6_3:9257218-9257237 | None:intergenic | 25.0% |
| !!! | ATCAAGACTTTAAAATAGAG+AGG | - | chr6_3:9257218-9257237 | Msa0937810:intron | 25.0% |
| !! | TTTGAAATTTGAATTGGGTT+TGG | - | chr6_3:9257746-9257765 | Msa0937810:intron | 25.0% |
| ! | TTGAAATTTGAATTGGGTTT+GGG | - | chr6_3:9257747-9257766 | Msa0937810:intron | 25.0% |
| ! | CGGTTTCAATATATTGAAAT+TGG | - | chr6_3:9257975-9257994 | Msa0937810:intron | 25.0% |
| !!! | TGGTTTGTAAGAGTATTTTT+TGG | - | chr6_3:9257995-9258014 | Msa0937810:intron | 25.0% |
| !!! | GGTTTGTAAGAGTATTTTTT+GGG | - | chr6_3:9257996-9258015 | Msa0937810:intron | 25.0% |
| ! | TTTCGTTAAAGTTATGAAGT+TGG | - | chr6_3:9258400-9258419 | Msa0937810:intron | 25.0% |
| !! | GTTTGTCATTTATAAAGACT+TGG | - | chr6_3:9258576-9258595 | Msa0937810:intron | 25.0% |
| !! | TATAAAGACTTGGTTTCTTA+TGG | - | chr6_3:9258586-9258605 | Msa0937810:intron | 25.0% |
| !!! | AATCATCACTGCTTTTTTAT+AGG | - | chr6_3:9258623-9258642 | Msa0937810:intron | 25.0% |
| ! | CAACTTAAATCATGATTCAA+AGG | + | chr6_3:9258796-9258815 | None:intergenic | 25.0% |
| ! | CATTTCTCAAAATAAATGGA+GGG | + | chr6_3:9258888-9258907 | None:intergenic | 25.0% |
| ! | TCTCCATTTCTCAAAATAAA+TGG | + | chr6_3:9258892-9258911 | None:intergenic | 25.0% |
| ! | TTGATTCATTCATCAACAAT+TGG | - | chr6_3:9258939-9258958 | Msa0937810:intron | 25.0% |
| ! | TCAGAGAAATTAAAAATGGA+GGG | + | chr6_3:9259020-9259039 | None:intergenic | 25.0% |
| !!! | TTTTAATTTCTCTGAGATAC+TGG | - | chr6_3:9259025-9259044 | Msa0937810:intron | 25.0% |
| !!! | TGTAGTTGATTTGTTCATTT+TGG | - | chr6_3:9259166-9259185 | Msa0937810:intron | 25.0% |
| !! | CTTATCTTTAACTTATCTTC+AGG | - | chr6_3:9259594-9259613 | Msa0937810:intron | 25.0% |
| ! | GCCATAATATGCTTAAAAAT+TGG | + | chr6_3:9259658-9259677 | None:intergenic | 25.0% |
| ! | TCATTTATGATCTTACTAAG+TGG | - | chr6_3:9259753-9259772 | Msa0937810:exon | 25.0% |
| ! | CATTTATGATCTTACTAAGT+GGG | - | chr6_3:9259754-9259773 | Msa0937810:exon | 25.0% |
| !! | TAACCTTTTTCACTTTGACA+AGG | + | chr6_3:9256500-9256519 | None:intergenic | 30.0% |
| AGAAAAACAGATTAACTCAC+TGG | + | chr6_3:9256892-9256911 | None:intergenic | 30.0% | |
| ! | TACATTTGAAGCAATGCAAT+AGG | + | chr6_3:9256963-9256982 | None:intergenic | 30.0% |
| TTGCATTGCTTCAAATGTAA+AGG | - | chr6_3:9256964-9256983 | Msa0937810:intron | 30.0% | |
| ! | TAGAACTATTCTGAGAACTA+TGG | + | chr6_3:9257145-9257164 | None:intergenic | 30.0% |
| !! | ATAGGAGAAAGTGTTATTTC+AGG | + | chr6_3:9257200-9257219 | None:intergenic | 30.0% |
| ! | ATTTGATTTCTCACTGATTG+CGG | - | chr6_3:9257247-9257266 | Msa0937810:intron | 30.0% |
| GTCTAACTATGATCTATCTA+CGG | + | chr6_3:9257286-9257305 | None:intergenic | 30.0% | |
| !! | TTGTCTTATTTGTTCGTACT+TGG | - | chr6_3:9257612-9257631 | Msa0937810:intron | 30.0% |
| ! | TCTTGCAGATTTCTTTTGTT+TGG | - | chr6_3:9257720-9257739 | Msa0937810:intron | 30.0% |
| !! | CTTGCAGATTTCTTTTGTTT+GGG | - | chr6_3:9257721-9257740 | Msa0937810:intron | 30.0% |
| ! | TGGGTGTTTGAAATTTGAAT+TGG | - | chr6_3:9257740-9257759 | Msa0937810:intron | 30.0% |
| ! | GGGTGTTTGAAATTTGAATT+GGG | - | chr6_3:9257741-9257760 | Msa0937810:intron | 30.0% |
| GATCTGTTGAATTTGTAAGA+TGG | - | chr6_3:9257831-9257850 | Msa0937810:intron | 30.0% | |
| TGAGTCACATTACAATGATT+TGG | + | chr6_3:9258129-9258148 | None:intergenic | 30.0% | |
| !!! | CATGCAATTTTTTCACTCAT+AGG | - | chr6_3:9258209-9258228 | Msa0937810:intron | 30.0% |
| ACTTTAATAGCAGAGAACAT+AGG | + | chr6_3:9258341-9258360 | None:intergenic | 30.0% | |
| AAAAAGCAGTGATGATTGTA+AGG | + | chr6_3:9258620-9258639 | None:intergenic | 30.0% | |
| !!! | ATCACTGCTTTTTTATAGGT+TGG | - | chr6_3:9258627-9258646 | Msa0937810:intron | 30.0% |
| AAAAGTTGTATGAGAAAGCA+AGG | - | chr6_3:9258655-9258674 | Msa0937810:intron | 30.0% | |
| TCATGATTCAAAGGCAAAAA+GGG | + | chr6_3:9258787-9258806 | None:intergenic | 30.0% | |
| ATCATGATTCAAAGGCAAAA+AGG | + | chr6_3:9258788-9258807 | None:intergenic | 30.0% | |
| CCATTTCTCAAAATAAATGG+AGG | + | chr6_3:9258889-9258908 | None:intergenic | 30.0% | |
| !!! | CCTCCATTTATTTTGAGAAA+TGG | - | chr6_3:9258886-9258905 | Msa0937810:intron | 30.0% |
| CTCAGAGAAATTAAAAATGG+AGG | + | chr6_3:9259021-9259040 | None:intergenic | 30.0% | |
| !! | TTTAGAGTGACTTGTTCTAA+AGG | - | chr6_3:9259231-9259250 | Msa0937810:intron | 30.0% |
| !! | TTAGAGTGACTTGTTCTAAA+GGG | - | chr6_3:9259232-9259251 | Msa0937810:intron | 30.0% |
| ACTTACCAATTGAATCTCTT+CGG | + | chr6_3:9259434-9259453 | None:intergenic | 30.0% | |
| GAATCTAATTGAAGGTCAAT+GGG | + | chr6_3:9259464-9259483 | None:intergenic | 30.0% | |
| TGAATCTAATTGAAGGTCAA+TGG | + | chr6_3:9259465-9259484 | None:intergenic | 30.0% | |
| TCACTCTTGAATCTAATTGA+AGG | + | chr6_3:9259472-9259491 | None:intergenic | 30.0% | |
| ! | GACTTGCAGTTTTCTTTTTT+TGG | - | chr6_3:9259616-9259635 | Msa0937810:intron | 30.0% |
| TTAAGAGTTCATTTCTGACT+TGG | - | chr6_3:9259698-9259717 | Msa0937810:intron | 30.0% | |
| ATCAATAAACCAGTAGCCAT+TGG | + | chr6_3:9256615-9256634 | None:intergenic | 35.0% | |
| ! | GGTTTATTGATTGTTTGCGT+TGG | - | chr6_3:9256624-9256643 | Msa0937810:three_prime_UTR | 35.0% |
| CCAGTACTTAGTACTCAAAT+GGG | + | chr6_3:9256701-9256720 | None:intergenic | 35.0% | |
| TCCAGTACTTAGTACTCAAA+TGG | + | chr6_3:9256702-9256721 | None:intergenic | 35.0% | |
| ! | AAACTGTACTATAGTGGAAC+AGG | + | chr6_3:9256726-9256745 | None:intergenic | 35.0% |
| AGATATCAAGGGATGGTTAA+GGG | - | chr6_3:9256811-9256830 | Msa0937810:CDS | 35.0% | |
| ! | TTTGATTTCTCACTGATTGC+GGG | - | chr6_3:9257248-9257267 | Msa0937810:intron | 35.0% |
| ATTTGTTCGTACTTGGCTAT+TGG | - | chr6_3:9257619-9257638 | Msa0937810:CDS | 35.0% | |
| ! | TTTTCCTGCTTCATTAGTTG+TGG | - | chr6_3:9257781-9257800 | Msa0937810:intron | 35.0% |
| TTTCCTGCTTCATTAGTTGT+GGG | - | chr6_3:9257782-9257801 | Msa0937810:intron | 35.0% | |
| !!! | ATTCAGCCGGTTTTAGTTAT+TGG | + | chr6_3:9257809-9257828 | None:intergenic | 35.0% |
| TTCAACAGATCAAATTCAGC+CGG | + | chr6_3:9257822-9257841 | None:intergenic | 35.0% | |
| GTTGAATTTGTAAGATGGTG+AGG | - | chr6_3:9257836-9257855 | Msa0937810:intron | 35.0% | |
| ATGATTTGATGTTTGGACCT+TGG | - | chr6_3:9257951-9257970 | Msa0937810:intron | 35.0% | |
| TGATTTGATGTTTGGACCTT+GGG | - | chr6_3:9257952-9257971 | Msa0937810:intron | 35.0% | |
| !! | GAAAAGTATCAATTCAAGCC+TGG | - | chr6_3:9258093-9258112 | Msa0937810:CDS | 35.0% |
| ! | TGATTTGGATGCATTTATCC+AGG | + | chr6_3:9258114-9258133 | None:intergenic | 35.0% |
| TGTGACTCATAAGCAGAATT+AGG | - | chr6_3:9258140-9258159 | Msa0937810:intron | 35.0% | |
| GAATGACCTACATATTAAGC+TGG | + | chr6_3:9258235-9258254 | None:intergenic | 35.0% | |
| TTAATAGCAGAGAACATAGG+TGG | + | chr6_3:9258338-9258357 | None:intergenic | 35.0% | |
| !!! | ACTGCTTTTTTATAGGTTGG+AGG | - | chr6_3:9258630-9258649 | Msa0937810:intron | 35.0% |
| TGGAAGATTGAAATTCGTCT+TGG | + | chr6_3:9258705-9258724 | None:intergenic | 35.0% | |
| CATGATTCAAAGGCAAAAAG+GGG | + | chr6_3:9258786-9258805 | None:intergenic | 35.0% | |
| CAGTTTATGTTTCACGAGTA+CGG | + | chr6_3:9258919-9258938 | None:intergenic | 35.0% | |
| AAAATGGAGGGTCAAAGATT+AGG | + | chr6_3:9259008-9259027 | None:intergenic | 35.0% | |
| TAACAGCTTTGCGCTTATAA+TGG | - | chr6_3:9259050-9259069 | Msa0937810:intron | 35.0% | |
| ATATATTCGATCACTCTGTG+CGG | - | chr6_3:9259257-9259276 | Msa0937810:intron | 35.0% | |
| AATATTCAGCAGATGATGCA+TGG | - | chr6_3:9259537-9259556 | Msa0937810:CDS | 35.0% | |
| ATATTCAGCAGATGATGCAT+GGG | - | chr6_3:9259538-9259557 | Msa0937810:CDS | 35.0% | |
| TATGATCTTACTAAGTGGGT+CGG | - | chr6_3:9259758-9259777 | Msa0937810:five_prime_UTR | 35.0% | |
| TGGACTTCATTCACAGTTTG+TGG | - | chr6_3:9256462-9256481 | Msa0937810:three_prime_UTR | 40.0% | |
| TCGCCTTGTCAAAGTGAAAA+AGG | - | chr6_3:9256494-9256513 | Msa0937810:three_prime_UTR | 40.0% | |
| CCCATTTGAGTACTAAGTAC+TGG | - | chr6_3:9256698-9256717 | Msa0937810:three_prime_UTR | 40.0% | |
| ATGCTTCAGATATCAAGGGA+TGG | - | chr6_3:9256804-9256823 | Msa0937810:CDS | 40.0% | |
| CAGATATCAAGGGATGGTTA+AGG | - | chr6_3:9256810-9256829 | Msa0937810:CDS | 40.0% | |
| GGATGGTTAAGGGTTATAGT+GGG | - | chr6_3:9256821-9256840 | Msa0937810:intron | 40.0% | |
| GATGGTTAAGGGTTATAGTG+GGG | - | chr6_3:9256822-9256841 | Msa0937810:intron | 40.0% | |
| AGACAAATGAGCTCACACTA+TGG | - | chr6_3:9257043-9257062 | Msa0937810:intron | 40.0% | |
| ACACGAACAAAATTGGAGCA+TGG | + | chr6_3:9257420-9257439 | None:intergenic | 40.0% | |
| ! | GCTCCAATTTTGTTCGTGTT+TGG | - | chr6_3:9257421-9257440 | Msa0937810:intron | 40.0% |
| CTGCCAAACACGAACAAAAT+TGG | + | chr6_3:9257427-9257446 | None:intergenic | 40.0% | |
| ATCTGCAAGAACCAGTGTTT+CGG | + | chr6_3:9257710-9257729 | None:intergenic | 40.0% | |
| GTGGGTCCAATAACTAAAAC+CGG | - | chr6_3:9257800-9257819 | Msa0937810:intron | 40.0% | |
| ! | TCAAATGGGCAATTTTCGCA+TGG | + | chr6_3:9257882-9257901 | None:intergenic | 40.0% |
| CGAAAATTGCCCATTTGATG+AGG | - | chr6_3:9257884-9257903 | Msa0937810:intron | 40.0% | |
| ACACATAGGCCTCATCAAAT+GGG | + | chr6_3:9257896-9257915 | None:intergenic | 40.0% | |
| AACACATAGGCCTCATCAAA+TGG | + | chr6_3:9257897-9257916 | None:intergenic | 40.0% | |
| CAATATATTGAAACCGCCCA+AGG | + | chr6_3:9257971-9257990 | None:intergenic | 40.0% | |
| CATAGGCCAGCTTAATATGT+AGG | - | chr6_3:9258226-9258245 | Msa0937810:intron | 40.0% | |
| !!! | AAAAGTGCCTTGTCCTTTTG+TGG | - | chr6_3:9258296-9258315 | Msa0937810:intron | 40.0% |
| !! | AAAGTGCCTTGTCCTTTTGT+GGG | - | chr6_3:9258297-9258316 | Msa0937810:intron | 40.0% |
| TTGTATGAGAAAGCAAGGAG+AGG | - | chr6_3:9258660-9258679 | Msa0937810:intron | 40.0% | |
| TGTATGAGAAAGCAAGGAGA+GGG | - | chr6_3:9258661-9258680 | Msa0937810:intron | 40.0% | |
| AGCTACGCTCTATGTCAAAT+TGG | + | chr6_3:9258725-9258744 | None:intergenic | 40.0% | |
| ATTTGACATAGAGCGTAGCT+TGG | - | chr6_3:9258725-9258744 | Msa0937810:intron | 40.0% | |
| TTGGATGACAGGTAACTTTC+TGG | - | chr6_3:9258744-9258763 | Msa0937810:intron | 40.0% | |
| TGGATGACAGGTAACTTTCT+GGG | - | chr6_3:9258745-9258764 | Msa0937810:intron | 40.0% | |
| !! | TATCACGCATCGCTTGTTAT+TGG | - | chr6_3:9259093-9259112 | Msa0937810:intron | 40.0% |
| !! | ATCACGCATCGCTTGTTATT+GGG | - | chr6_3:9259094-9259113 | Msa0937810:intron | 40.0% |
| TCATCTGCTGAATATTGTGC+TGG | + | chr6_3:9259533-9259552 | None:intergenic | 40.0% | |
| AAGCATATTATGGCCCTTTG+TGG | - | chr6_3:9259664-9259683 | Msa0937810:intron | 40.0% | |
| ! | TATTTACAGGTTGGGCATGC+CGG | - | chr6_3:9256579-9256598 | Msa0937810:three_prime_UTR | 45.0% |
| AGCCATTGGATCAAGAGTTC+CGG | + | chr6_3:9256601-9256620 | None:intergenic | 45.0% | |
| ACTCTTGATCCAATGGCTAC+TGG | - | chr6_3:9256603-9256622 | Msa0937810:three_prime_UTR | 45.0% | |
| CGTTGGCAAGTCAACAAAAC+TGG | - | chr6_3:9256641-9256660 | Msa0937810:three_prime_UTR | 45.0% | |
| TGGCAAGTCAACAAAACTGG+TGG | - | chr6_3:9256644-9256663 | Msa0937810:three_prime_UTR | 45.0% | |
| ! | AGTCAACAAAACTGGTGGAC+AGG | - | chr6_3:9256649-9256668 | Msa0937810:three_prime_UTR | 45.0% |
| GGGATGGTTAAGGGTTATAG+TGG | - | chr6_3:9256820-9256839 | Msa0937810:intron | 45.0% | |
| !! | TATAGTGGGGTTTTCCGCTT+AGG | - | chr6_3:9256835-9256854 | Msa0937810:intron | 45.0% |
| !! | ATAGTGGGGTTTTCCGCTTA+GGG | - | chr6_3:9256836-9256855 | Msa0937810:intron | 45.0% |
| GAGGTTGAAGGGTCCTTTAA+TGG | + | chr6_3:9257335-9257354 | None:intergenic | 45.0% | |
| CACATCGTACAGAGGTTGAA+GGG | + | chr6_3:9257346-9257365 | None:intergenic | 45.0% | |
| TCACATCGTACAGAGGTTGA+AGG | + | chr6_3:9257347-9257366 | None:intergenic | 45.0% | |
| AAAATTGGAGCATGGACCGT+CGG | + | chr6_3:9257412-9257431 | None:intergenic | 45.0% | |
| CAGAGAATCAAACAGAGCAG+AGG | + | chr6_3:9257523-9257542 | None:intergenic | 45.0% | |
| GTTGAGGGTGAAGAGAAAGA+TGG | - | chr6_3:9257573-9257592 | Msa0937810:intron | 45.0% | |
| AGAACCAGTGTTTCGGGAAA+AGG | + | chr6_3:9257703-9257722 | None:intergenic | 45.0% | |
| TCTGCAAGAACCAGTGTTTC+GGG | + | chr6_3:9257709-9257728 | None:intergenic | 45.0% | |
| TTTGATGTTTGGACCTTGGG+CGG | - | chr6_3:9257955-9257974 | Msa0937810:intron | 45.0% | |
| ! | AAGTGCCTTGTCCTTTTGTG+GGG | - | chr6_3:9258298-9258317 | Msa0937810:intron | 45.0% |
| AATCTCCCCACAAAAGGACA+AGG | + | chr6_3:9258306-9258325 | None:intergenic | 45.0% | |
| ! | TGTCCTTTTGTGGGGAGATT+TGG | - | chr6_3:9258306-9258325 | Msa0937810:intron | 45.0% |
| TTGCCAAATCTCCCCACAAA+AGG | + | chr6_3:9258312-9258331 | None:intergenic | 45.0% | |
| GTATGAGAAAGCAAGGAGAG+GGG | - | chr6_3:9258662-9258681 | Msa0937810:intron | 45.0% | |
| !! | TCACGCATCGCTTGTTATTG+GGG | - | chr6_3:9259095-9259114 | Msa0937810:intron | 45.0% |
| ! | GATCACTCTGTGCGGATTTT+GGG | - | chr6_3:9259265-9259284 | Msa0937810:intron | 45.0% |
| GCTCTCCGAAGAGATTCAAT+TGG | - | chr6_3:9259426-9259445 | Msa0937810:intron | 45.0% | |
| !! | GACTTGGTGCGTAGAATTGT+CGG | - | chr6_3:9259714-9259733 | Msa0937810:CDS | 45.0% |
| !! | AATATATAAAATAATAATGA+TGG | - | chr6_3:9258857-9258876 | Msa0937810:intron | 5.0% |
| TGCCGGAACTCTTGATCCAA+TGG | - | chr6_3:9256596-9256615 | Msa0937810:three_prime_UTR | 50.0% | |
| ! | TAGTGGGGTTTTCCGCTTAG+GGG | - | chr6_3:9256837-9256856 | Msa0937810:intron | 50.0% |
| TTGAAGTAGCCTCCCCTAAG+CGG | + | chr6_3:9256852-9256871 | None:intergenic | 50.0% | |
| TAGGGGAGGCTACTTCAACA+TGG | - | chr6_3:9256854-9256873 | Msa0937810:intron | 50.0% | |
| AGGGGAGGCTACTTCAACAT+GGG | - | chr6_3:9256855-9256874 | Msa0937810:intron | 50.0% | |
| ACGCAAGTCACATCGTACAG+AGG | + | chr6_3:9257354-9257373 | None:intergenic | 50.0% | |
| AAATTGGAGCATGGACCGTC+GGG | + | chr6_3:9257411-9257430 | None:intergenic | 50.0% | |
| TGGCAAGTTGCATTCTCGCA+GGG | + | chr6_3:9257451-9257470 | None:intergenic | 50.0% | |
| ATGGCAAGTTGCATTCTCGC+AGG | + | chr6_3:9257452-9257471 | None:intergenic | 50.0% | |
| GAACTACGCACTGAAGAACG+TGG | + | chr6_3:9257489-9257508 | None:intergenic | 50.0% | |
| ! | TGCACCTTTTCCCGAAACAC+TGG | - | chr6_3:9257696-9257715 | Msa0937810:CDS | 50.0% |
| GGACCCACAACTAATGAAGC+AGG | + | chr6_3:9257788-9257807 | None:intergenic | 50.0% | |
| TCGTCTTTGATGTGCTCCCA+TGG | + | chr6_3:9258266-9258285 | None:intergenic | 50.0% | |
| ! | ATGGGAGCACATCAAAGACG+AGG | - | chr6_3:9258265-9258284 | Msa0937810:intron | 50.0% |
| TAGAGCGTAGCTTGGATGAC+AGG | - | chr6_3:9258733-9258752 | Msa0937810:intron | 50.0% | |
| ! | AGGCAAAAAGGGGCACAGAA+CGG | + | chr6_3:9258776-9258795 | None:intergenic | 50.0% |
| ! | CGATCACTCTGTGCGGATTT+TGG | - | chr6_3:9259264-9259283 | Msa0937810:intron | 50.0% |
| !! | ACTCTGTGCGGATTTTGGGA+AGG | - | chr6_3:9259269-9259288 | Msa0937810:intron | 50.0% |
| !! | ATTTTGGGAAGGCTCTTGGC+AGG | - | chr6_3:9259280-9259299 | Msa0937810:intron | 50.0% |
| TTGTAGTTGCGCCCACCTAA+CGG | - | chr6_3:9259404-9259423 | Msa0937810:intron | 50.0% | |
| AATCTCTTCGGAGAGCCGTT+AGG | + | chr6_3:9259422-9259441 | None:intergenic | 50.0% | |
| TGCATGGGACTTTCAAGAGC+TGG | - | chr6_3:9259553-9259572 | Msa0937810:intron | 50.0% | |
| GGACTTTCAAGAGCTGGAAG+AGG | - | chr6_3:9259559-9259578 | Msa0937810:intron | 50.0% | |
| GACGAAGTCGCAGCATACAG+AGG | + | chr6_3:9257381-9257400 | None:intergenic | 55.0% | |
| ACTTCGTCTGTCATCCCCGA+CGG | - | chr6_3:9257393-9257412 | Msa0937810:intron | 55.0% | |
| AATTGGAGCATGGACCGTCG+GGG | + | chr6_3:9257410-9257429 | None:intergenic | 55.0% | |
| TCACCCTCAACCACACACAG+TGG | + | chr6_3:9257564-9257583 | None:intergenic | 55.0% | |
| AGGTCATTCAGCGTGAGCCA+TGG | - | chr6_3:9258246-9258265 | Msa0937810:intron | 55.0% | |
| GGTCATTCAGCGTGAGCCAT+GGG | - | chr6_3:9258247-9258266 | Msa0937810:intron | 55.0% | |
| ! | CAAAAAGGGGCACAGAACGG+AGG | + | chr6_3:9258773-9258792 | None:intergenic | 55.0% |
| !! | GCGGATTTTGGGAAGGCTCT+TGG | - | chr6_3:9259276-9259295 | Msa0937810:intron | 55.0% |
| TCTTCGGAGAGCCGTTAGGT+GGG | + | chr6_3:9259418-9259437 | None:intergenic | 55.0% | |
| ! | TGGGGTTTTCCGCTTAGGGG+AGG | - | chr6_3:9256840-9256859 | Msa0937810:intron | 60.0% |
| AGAACGTGGCAGAGGCAGAG+AGG | + | chr6_3:9257475-9257494 | None:intergenic | 60.0% | |
| CGCACTGAAGAACGTGGCAG+AGG | + | chr6_3:9257483-9257502 | None:intergenic | 60.0% | |
| !! | CACACACAGTGGCGGATCAG+AGG | + | chr6_3:9257553-9257572 | None:intergenic | 60.0% |
| CTCTGATCCGCCACTGTGTG+TGG | - | chr6_3:9257551-9257570 | Msa0937810:intron | 60.0% | |
| TCCGCCACTGTGTGTGGTTG+AGG | - | chr6_3:9257557-9257576 | Msa0937810:intron | 60.0% | |
| CCCTCAACCACACACAGTGG+CGG | + | chr6_3:9257561-9257580 | None:intergenic | 60.0% | |
| CCGCCACTGTGTGTGGTTGA+GGG | - | chr6_3:9257558-9257577 | Msa0937810:intron | 60.0% | |
| CTCTTCGGAGAGCCGTTAGG+TGG | + | chr6_3:9259419-9259438 | None:intergenic | 60.0% | |
| CGTGGCAGAGGCAGAGAGGA+TGG | + | chr6_3:9257471-9257490 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 9256460 | 9259910 | 9256460 | ID=Msa0937810;Name=Msa0937810 |
| chr6_3 | mRNA | 9256460 | 9259910 | 9256460 | ID=Msa0937810-mRNA-1;Parent=Msa0937810;Name=Msa0937810-mRNA-1;_AED=0.01;_eAED=0.01;_QI=83|0.85|0.75|1|1|1|8|306|182 |
| chr6_3 | exon | 9256460 | 9256836 | 9256460 | ID=Msa0937810-mRNA-1:exon:2987;Parent=Msa0937810-mRNA-1 |
| chr6_3 | exon | 9256923 | 9256960 | 9256923 | ID=Msa0937810-mRNA-1:exon:2986;Parent=Msa0937810-mRNA-1 |
| chr6_3 | exon | 9257069 | 9257152 | 9257069 | ID=Msa0937810-mRNA-1:exon:2985;Parent=Msa0937810-mRNA-1 |
| chr6_3 | exon | 9257616 | 9257725 | 9257616 | ID=Msa0937810-mRNA-1:exon:2984;Parent=Msa0937810-mRNA-1 |
| chr6_3 | exon | 9258012 | 9258122 | 9258012 | ID=Msa0937810-mRNA-1:exon:2983;Parent=Msa0937810-mRNA-1 |
| chr6_3 | exon | 9259479 | 9259557 | 9259479 | ID=Msa0937810-mRNA-1:exon:2982;Parent=Msa0937810-mRNA-1 |
| chr6_3 | exon | 9259700 | 9259782 | 9259700 | ID=Msa0937810-mRNA-1:exon:2981;Parent=Msa0937810-mRNA-1 |
| chr6_3 | exon | 9259855 | 9259910 | 9259855 | ID=Msa0937810-mRNA-1:exon:2980;Parent=Msa0937810-mRNA-1 |
| chr6_3 | five_prime_UTR | 9259855 | 9259910 | 9259855 | ID=Msa0937810-mRNA-1:five_prime_utr;Parent=Msa0937810-mRNA-1 |
| chr6_3 | five_prime_UTR | 9259756 | 9259782 | 9259756 | ID=Msa0937810-mRNA-1:five_prime_utr;Parent=Msa0937810-mRNA-1 |
| chr6_3 | CDS | 9259700 | 9259755 | 9259700 | ID=Msa0937810-mRNA-1:cds;Parent=Msa0937810-mRNA-1 |
| chr6_3 | CDS | 9259479 | 9259557 | 9259479 | ID=Msa0937810-mRNA-1:cds;Parent=Msa0937810-mRNA-1 |
| chr6_3 | CDS | 9258012 | 9258122 | 9258012 | ID=Msa0937810-mRNA-1:cds;Parent=Msa0937810-mRNA-1 |
| chr6_3 | CDS | 9257616 | 9257725 | 9257616 | ID=Msa0937810-mRNA-1:cds;Parent=Msa0937810-mRNA-1 |
| chr6_3 | CDS | 9257069 | 9257152 | 9257069 | ID=Msa0937810-mRNA-1:cds;Parent=Msa0937810-mRNA-1 |
| chr6_3 | CDS | 9256923 | 9256960 | 9256923 | ID=Msa0937810-mRNA-1:cds;Parent=Msa0937810-mRNA-1 |
| chr6_3 | CDS | 9256766 | 9256836 | 9256766 | ID=Msa0937810-mRNA-1:cds;Parent=Msa0937810-mRNA-1 |
| chr6_3 | three_prime_UTR | 9256460 | 9256765 | 9256460 | ID=Msa0937810-mRNA-1:three_prime_utr;Parent=Msa0937810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
