AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1046280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1046280 MtrunA17_Chr7g0214221 89.258 512 9 1 26 491 29 540 0.0 916
Msa1046280 MtrunA17_Chr8g0348831 45.200 500 223 4 27 477 25 522 1.61e-144 425
Msa1046280 MtrunA17_Chr7g0247841 45.243 515 229 4 11 477 10 519 4.88e-144 424
Msa1046280 MtrunA17_Chr6g0475601 44.807 491 223 3 34 477 34 523 1.16e-139 412
Msa1046280 MtrunA17_Chr1g0213851 62.810 242 44 1 293 488 1 242 3.71e-98 295
Msa1046280 MtrunA17_Chr1g0213841 63.717 113 41 0 179 291 6 118 4.95e-46 156
Msa1046280 MtrunA17_Chr1g0213831 49.618 131 56 2 6 136 4 124 1.31e-33 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1046280 AT2G43070.1 49.902 511 208 4 25 488 26 535 5.13e-179 513
Msa1046280 AT2G43070.3 49.902 511 208 4 25 488 85 594 4.51e-178 513
Msa1046280 AT2G43070.2 49.225 516 210 5 25 488 26 541 1.26e-177 510
Msa1046280 AT2G43070.4 49.225 516 210 5 25 488 85 600 1.11e-176 509
Msa1046280 AT1G05820.1 51.089 505 195 3 34 491 31 530 6.34e-176 505
Msa1046280 AT1G05820.2 51.050 476 186 2 34 462 31 506 2.34e-165 477
Msa1046280 AT1G01650.1 41.978 536 257 5 7 489 6 540 9.62e-141 416
Msa1046280 AT1G05820.3 53.743 374 172 1 34 406 31 404 1.56e-140 410
Msa1046280 AT1G05820.4 51.899 395 138 3 144 491 1 390 2.01e-140 409
Msa1046280 AT1G63690.1 43.574 498 232 3 27 477 27 522 1.15e-138 410
Msa1046280 AT1G63690.2 43.373 498 233 3 27 477 27 522 4.95e-138 409
Msa1046280 AT1G01650.3 43.609 399 171 5 144 489 1 398 1.24e-104 318
Msa1046280 AT1G01650.4 43.609 399 171 5 144 489 1 398 1.24e-104 318
Msa1046280 AT1G01650.2 43.609 399 171 5 144 489 1 398 1.24e-104 318

Find 106 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATTACAAGCCTTACTTTA+AGG 0.126313 7_2:-6772995 Msa1046280:intron
CATGCACCTTACAGTATAAA+AGG 0.213372 7_2:-6767314 Msa1046280:three_prime_UTR
CATTGGGTTTAGAAAGTTAA+AGG 0.221756 7_2:+6767251 None:intergenic
CCATTCAGATACCTTAATAT+TGG 0.231560 7_2:+6771870 None:intergenic
ACCGTGAATGTACCTCTATT+TGG 0.270390 7_2:-6772833 Msa1046280:CDS
GGCTCAATTACCCAATATTA+AGG 0.281634 7_2:-6771881 Msa1046280:intron
GAAGGGGTTATTGCAGGATT+TGG 0.304237 7_2:+6776368 None:intergenic
CCGTGAATGTACCTCTATTT+GGG 0.311643 7_2:-6772832 Msa1046280:CDS
AACAGGTGTCTTTATCATAC+TGG 0.323193 7_2:-6767670 Msa1046280:intron
CATTCAGATACCTTAATATT+GGG 0.336485 7_2:+6771871 None:intergenic
TGTTCTTCTTCATGTCATCT+TGG 0.341498 7_2:-6773369 Msa1046280:CDS
ACAAAATAAATGCGGTGATT+AGG 0.364913 7_2:-6767496 Msa1046280:three_prime_UTR
CAATTGGAAGGGGTTATTGC+AGG 0.365992 7_2:+6776362 None:intergenic
CTGAAGAGCCTTTGGAACTA+TGG 0.375606 7_2:-6767630 Msa1046280:CDS
AGCGGTATGACTGCAAGATT+TGG 0.390051 7_2:-6776221 Msa1046280:CDS
CTCAATGCATCTTTAACATC+TGG 0.391847 7_2:-6775093 Msa1046280:CDS
AGCAGGAAATGGCATAATAT+TGG 0.401964 7_2:-6772863 Msa1046280:intron
CTATATCTGATGGACGGAAA+TGG 0.410311 7_2:-6767825 Msa1046280:CDS
TTATTGCAGGATTTGGACTT+GGG 0.431374 7_2:+6776375 None:intergenic
AAAGCTACCATTGCACAATC+TGG 0.431460 7_2:-6775690 Msa1046280:CDS
CTGTTCATCTTCAACTTCAA+AGG 0.431581 7_2:-6776129 Msa1046280:intron
GAGGTGAGCTGAAGAGCCTT+TGG 0.433531 7_2:-6767638 Msa1046280:CDS
TCATGTCATCTTGGTTTATG+TGG 0.433677 7_2:-6773360 Msa1046280:CDS
CTGCAATCATGACACTTTCG+TGG 0.440698 7_2:+6771670 None:intergenic
GCACAATCTGGAGGTGCTAC+TGG 0.444792 7_2:-6775678 Msa1046280:CDS
ATCGCGTTTCACATCGTTTG+AGG 0.445256 7_2:+6776410 None:intergenic
CTTGTCAGATCTTGTTGAGA+TGG 0.448507 7_2:-6775187 Msa1046280:intron
GTTATTGCAGGATTTGGACT+TGG 0.449116 7_2:+6776374 None:intergenic
CATGAATCTTATTCGTGGAT+TGG 0.453557 7_2:-6772737 Msa1046280:CDS
GATTGGTGTACCTTAAAGTA+AGG 0.461098 7_2:+6772985 None:intergenic
CTCGACATGAATCTTATTCG+TGG 0.464019 7_2:-6772742 Msa1046280:CDS
GTAGGATTAGAGAAAAGAAC+AGG 0.464111 7_2:+6776158 None:intergenic
CTGCAATAACCCCTTCCAAT+TGG 0.473899 7_2:-6776361 Msa1046280:intron
CAATTGTGTGTGCTTCACTA+TGG 0.479326 7_2:-6773944 Msa1046280:CDS
CTTATTCTGTGTGGCATTTG+CGG 0.479391 7_2:-6772780 Msa1046280:CDS
CTAACTACTCCAGAGAAGTC+TGG 0.484549 7_2:-6773915 Msa1046280:CDS
CTGTTGCACTATGTATTCGT+GGG 0.490034 7_2:-6775731 Msa1046280:CDS
AAGGCTCTGTGGACAAGGAC+GGG 0.495704 7_2:+6767601 None:intergenic
TTTCTGCATCGCTGGTATTG+AGG 0.498054 7_2:-6773323 Msa1046280:intron
AGTTCTTAACATTAATTCAA+AGG 0.500692 7_2:-6773437 Msa1046280:CDS
AGGACAAACACCAGGTGTAC+AGG 0.503043 7_2:-6767476 Msa1046280:three_prime_UTR
AACTAATTACCTAGTGTACA+TGG 0.508747 7_2:+6767777 None:intergenic
TTGAAATGATCACAGCTCAA+TGG 0.513735 7_2:-6767522 Msa1046280:three_prime_UTR
ATAGAAATCTCCCCAAATAG+AGG 0.515017 7_2:+6772821 None:intergenic
ATGGAGCACAACGATAGTTA+TGG 0.518127 7_2:+6767451 None:intergenic
TTACAAGAGAGCTATGACGA+TGG 0.519480 7_2:+6767432 None:intergenic
ATCTGAAGGCTCTGTGGACA+AGG 0.520593 7_2:+6767596 None:intergenic
TCTGTTGCACTATGTATTCG+TGG 0.520835 7_2:-6775732 Msa1046280:CDS
GAAGAACAACAGAACAAGAA+AGG 0.523771 7_2:+6773384 None:intergenic
CCCAAATAGAGGTACATTCA+CGG 0.524619 7_2:+6772832 None:intergenic
CAAAATGTTGCCGCAGCAAG+AGG 0.530332 7_2:-6773475 Msa1046280:CDS
AGTTATGGAGCCTGTACACC+TGG 0.536845 7_2:+6767466 None:intergenic
AACATAGATACCAATTGGAA+GGG 0.538212 7_2:+6776351 None:intergenic
TTGATCATAAATAATGAAGA+GGG 0.540583 7_2:-6775651 Msa1046280:intron
GAAGGCTCTGTGGACAAGGA+CGG 0.551683 7_2:+6767600 None:intergenic
TAACATAGATACCAATTGGA+AGG 0.553951 7_2:+6776350 None:intergenic
GTGTACATGGAACAAGGTAA+AGG 0.560022 7_2:+6767790 None:intergenic
CGAGGAAATCTCAAAAGCAT+AGG 0.561111 7_2:+6770508 None:intergenic
ATGCACCTTACAGTATAAAA+GGG 0.561678 7_2:-6767313 Msa1046280:three_prime_UTR
GTGATGATAACAAAATCAGC+AGG 0.562351 7_2:-6775123 Msa1046280:CDS
GATGATAACAGTCTTGCAGT+TGG 0.562665 7_2:-6771902 Msa1046280:CDS
CGTAGGCAAAGGCACAAGAA+AGG 0.563267 7_2:+6771727 None:intergenic
AACTGGGCAGATGGTGAGGA+AGG 0.563889 7_2:-6776254 Msa1046280:CDS
GGAACAAGGTAAAGGAGTGC+AGG 0.565273 7_2:+6767798 None:intergenic
TGAAACTTACAAGAGTGTCT+TGG 0.566650 7_2:+6772714 None:intergenic
TACCTTGTTCCATGTACACT+AGG 0.572010 7_2:-6767786 Msa1046280:intron
GTTGCTCGAGGTGACAAGGC+TGG 0.572106 7_2:-6770544 Msa1046280:CDS
TTTGATCATAAATAATGAAG+AGG 0.572536 7_2:-6775652 Msa1046280:CDS
ACAGGTGTCTTTATCATACT+GGG 0.577795 7_2:-6767669 Msa1046280:intron
GAAGATGAACAGCAGTCAGT+AGG 0.579933 7_2:+6776140 None:intergenic
ACAGGTTGCTCGAGGTGACA+AGG 0.580045 7_2:-6770548 Msa1046280:intron
TGTTGCACTATGTATTCGTG+GGG 0.587147 7_2:-6775730 Msa1046280:CDS
GAAAGACAGAAGGAGAACCC+AGG 0.590979 7_2:-6767402 Msa1046280:three_prime_UTR
ACTTAAACTTCTGAATCTGA+AGG 0.591672 7_2:+6767582 None:intergenic
GAGAAGTCTACAAGTGGTCG+AGG 0.593645 7_2:+6773999 None:intergenic
ATATTTGGGACTATATCTGA+TGG 0.596954 7_2:-6767835 Msa1046280:CDS
TTCTGAATCTGAAGGCTCTG+TGG 0.600028 7_2:+6767590 None:intergenic
CTATAGTGAATTATATCCCA+AGG 0.613141 7_2:-6773886 Msa1046280:intron
ATCAGAACTGCCTCTTGCTG+CGG 0.613780 7_2:+6773465 None:intergenic
TCTTTAACATCTGGAAGGAG+AGG 0.617879 7_2:-6775084 Msa1046280:intron
GGCAGTGTTCTTATTCTGTG+TGG 0.621833 7_2:-6772789 Msa1046280:CDS
ATGCATCTTTAACATCTGGA+AGG 0.622526 7_2:-6775089 Msa1046280:CDS
TGGAATTGTGATGTTTGCCT+CGG 0.628100 7_2:+6775149 None:intergenic
ACATAGATACCAATTGGAAG+GGG 0.630946 7_2:+6776352 None:intergenic
GGTCTGTGCCATAGTTCCAA+AGG 0.631166 7_2:+6767622 None:intergenic
ATCATACTGGGATGTGTGAG+AGG 0.640789 7_2:-6767657 Msa1046280:CDS
CAGTATAAAAGGGATACAGT+AGG 0.646773 7_2:-6767303 Msa1046280:three_prime_UTR
TACCTAGTGTACATGGAACA+AGG 0.648646 7_2:+6767784 None:intergenic
GCAACTGAGAAGTCTACAAG+TGG 0.652290 7_2:+6773993 None:intergenic
AAGTCTACAAGTGGTCGAGG+TGG 0.653317 7_2:+6774002 None:intergenic
AGCAACGAACTATAATACAA+TGG 0.653476 7_2:-6776505 Msa1046280:exon
TTGGGACTATATCTGATGGA+CGG 0.656493 7_2:-6767831 Msa1046280:CDS
AGCACCTCCAGATTGTGCAA+TGG 0.659277 7_2:+6775683 None:intergenic
GCTACCATTGCACAATCTGG+AGG 0.659494 7_2:-6775687 Msa1046280:CDS
CGTGAATGTACCTCTATTTG+GGG 0.661213 7_2:-6772831 Msa1046280:CDS
GCTCGAGGTGACAAGGCTGG+TGG 0.663108 7_2:-6770541 Msa1046280:CDS
GTCCCAAATATGTGAAAACG+AGG 0.667691 7_2:+6767847 None:intergenic
CGGTGATTAGGACAAACACC+AGG 0.672862 7_2:-6767484 Msa1046280:three_prime_UTR
TGCTGATATGACAAATACAA+CGG 0.681417 7_2:+6773411 None:intergenic
ACACTTTCGTGGAATATCAG+CGG 0.689571 7_2:+6771681 None:intergenic
AATGGAGTACAAAATAAATG+CGG 0.691462 7_2:-6767504 Msa1046280:three_prime_UTR
CACGGTAGTTAGTTAGATCG+CGG 0.709815 7_2:-6776554 Msa1046280:five_prime_UTR
GTTGCACTATGTATTCGTGG+GGG 0.728676 7_2:-6775729 Msa1046280:CDS
GAGGAAGGTGTTATTCAAAG+CGG 0.739490 7_2:-6776239 Msa1046280:CDS
TAGAAGTAACTACTACACCA+CGG 0.748553 7_2:-6776572 Msa1046280:five_prime_UTR
GGTTTGCACTGATAGTACCG+AGG 0.757624 7_2:-6775166 Msa1046280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATACAAACTTAAATTAA+TGG + chr7_2:6770742-6770761 None:intergenic 10.0%
!! ATGATAATAATTAAGTAATA+TGG + chr7_2:6772443-6772462 None:intergenic 10.0%
!! ATATTACTTAATTATTATCA+TGG - chr7_2:6772442-6772461 Msa1046280:intron 10.0%
!! ATTAGAATAATATAAATGAA+GGG + chr7_2:6772574-6772593 None:intergenic 10.0%
!! AATTAGAATAATATAAATGA+AGG + chr7_2:6772575-6772594 None:intergenic 10.0%
!! AAAAATATAGAAAAGTGAAA+TGG - chr7_2:6767771-6767790 Msa1046280:intron 15.0%
!! CAAATTAAACAAAAAAAGAA+GGG + chr7_2:6768165-6768184 None:intergenic 15.0%
!! ACAAATTAAACAAAAAAAGA+AGG + chr7_2:6768166-6768185 None:intergenic 15.0%
!! TTATATTGAATAATGTATTC+AGG + chr7_2:6768321-6768340 None:intergenic 15.0%
!!! TATTAGATGAAAATCTTTTT+TGG - chr7_2:6768819-6768838 Msa1046280:intron 15.0%
!! AAAAATTAATATGCACTATT+GGG + chr7_2:6769250-6769269 None:intergenic 15.0%
!!! TTTTTTAATCTTTTTTTGCT+AGG - chr7_2:6770274-6770293 Msa1046280:intron 15.0%
!! TTAAGTTTGTATTAATTTAC+AGG - chr7_2:6770747-6770766 Msa1046280:intron 15.0%
!! TAAGTTTGTATTAATTTACA+GGG - chr7_2:6770748-6770767 Msa1046280:intron 15.0%
!!! TTTTTATGTACTTGATAAAT+AGG - chr7_2:6772232-6772251 Msa1046280:intron 15.0%
!! TATCTATACCTATATATAAA+GGG - chr7_2:6772508-6772527 Msa1046280:intron 15.0%
!! CAATAAAATTCCATTATAAT+AGG - chr7_2:6772644-6772663 Msa1046280:intron 15.0%
!! ATAAGTTAAATATTTGATTG+TGG - chr7_2:6772693-6772712 Msa1046280:intron 15.0%
!!! TTGTATGCTTTTTTTTTTTT+TGG + chr7_2:6772725-6772744 None:intergenic 15.0%
!! TTTCTTAATATATGTGAAAT+TGG - chr7_2:6772926-6772945 Msa1046280:intron 15.0%
!!! ATGATTATTTTTAATTGACA+AGG - chr7_2:6773143-6773162 Msa1046280:intron 15.0%
!! TTATTAGTTAAAATTCACAT+GGG + chr7_2:6773868-6773887 None:intergenic 15.0%
!! TTTATTAGTTAAAATTCACA+TGG + chr7_2:6773869-6773888 None:intergenic 15.0%
!!! TTCTTTCTAATATTTTCTAT+AGG - chr7_2:6774082-6774101 Msa1046280:intron 15.0%
!!! TATTAAATGGATATTTTCTT+TGG - chr7_2:6774200-6774219 Msa1046280:intron 15.0%
!! AGAATTAATCAATACTAAAA+TGG + chr7_2:6774263-6774282 None:intergenic 15.0%
!! ACATTAAGTTAAGAATATTA+TGG - chr7_2:6775081-6775100 Msa1046280:intron 15.0%
!!! TGTTTGATAAAAATTCTTTT+TGG + chr7_2:6775216-6775235 None:intergenic 15.0%
!!! TTTTAGTTAGAGATTTATAA+GGG + chr7_2:6775301-6775320 None:intergenic 15.0%
!!! TTTTTAGTTAGAGATTTATA+AGG + chr7_2:6775302-6775321 None:intergenic 15.0%
!! TTATAAATCTCTAACTAAAA+AGG - chr7_2:6775301-6775320 Msa1046280:intron 15.0%
!! AAATTCCATTTATAGAATAT+TGG + chr7_2:6775511-6775530 None:intergenic 15.0%
!! AAATTACTAACAAATCAAAA+TGG + chr7_2:6775837-6775856 None:intergenic 15.0%
!! GATTTAATTAAATCAAACAA+TGG + chr7_2:6776087-6776106 None:intergenic 15.0%
!!! TTTGATTTAATTAAATCAAC+AGG - chr7_2:6776090-6776109 Msa1046280:intron 15.0%
!!! AAAAGTTAGTTAGATTAGTT+AGG + chr7_2:6767877-6767896 None:intergenic 20.0%
!! TTTGATCATAAATAATGAAG+AGG - chr7_2:6768125-6768144 Msa1046280:intron 20.0%
!! TTGATCATAAATAATGAAGA+GGG - chr7_2:6768126-6768145 Msa1046280:intron 20.0%
!! TAGAAGATAGTATATAAGTA+TGG - chr7_2:6769121-6769140 Msa1046280:intron 20.0%
!! CAAAAATTAATATGCACTAT+TGG + chr7_2:6769251-6769270 None:intergenic 20.0%
!!! TAGAGTTTTATATTATGTGT+TGG - chr7_2:6769364-6769383 Msa1046280:intron 20.0%
!!! TTTTATATTATGTGTTGGAT+TGG - chr7_2:6769369-6769388 Msa1046280:intron 20.0%
!! CTAAGAAAGAAAATAAATGA+TGG + chr7_2:6770113-6770132 None:intergenic 20.0%
!! ATAGTTCATGAAATTAAAAG+TGG + chr7_2:6770138-6770157 None:intergenic 20.0%
!!! AAACTTGAATAGATTGTTTT+CGG + chr7_2:6770210-6770229 None:intergenic 20.0%
!! AGTTCTTAACATTAATTCAA+AGG - chr7_2:6770340-6770359 Msa1046280:intron 20.0%
!! ATTCAATCATGTATGATATA+GGG + chr7_2:6770573-6770592 None:intergenic 20.0%
!! AAGTTTGTATTAATTTACAG+GGG - chr7_2:6770749-6770768 Msa1046280:intron 20.0%
!! AGATTTGTAAGAAATAGTAA+AGG + chr7_2:6770887-6770906 None:intergenic 20.0%
!!! TACTAACAAGTTTTAAGAAA+GGG + chr7_2:6771229-6771248 None:intergenic 20.0%
!!! TTACTAACAAGTTTTAAGAA+AGG + chr7_2:6771230-6771249 None:intergenic 20.0%
!! ACATTCACATATAAATACTA+GGG + chr7_2:6771343-6771362 None:intergenic 20.0%
!!! TATTTAATTGATTTAACAGC+TGG - chr7_2:6771509-6771528 Msa1046280:intron 20.0%
!! AATGTTAAAACTTCAAAGAA+TGG + chr7_2:6771546-6771565 None:intergenic 20.0%
!! TAATAATGAACTTGAAGAAT+AGG + chr7_2:6771647-6771666 None:intergenic 20.0%
!! ATTAATTTATTGTAGACATG+AGG + chr7_2:6771936-6771955 None:intergenic 20.0%
!! TTTACAGTAACTGTTATTAA+TGG + chr7_2:6771992-6772011 None:intergenic 20.0%
!!! ACTTGATAAATAGGAAATTT+TGG - chr7_2:6772241-6772260 Msa1046280:intron 20.0%
!! CCTAAATCAATAAGAAAATT+AGG + chr7_2:6772475-6772494 None:intergenic 20.0%
!!! CCTAATTTTCTTATTGATTT+AGG - chr7_2:6772472-6772491 Msa1046280:intron 20.0%
!! GTATCTATACCTATATATAA+AGG - chr7_2:6772507-6772526 Msa1046280:intron 20.0%
!! ATCTATACCTATATATAAAG+GGG - chr7_2:6772509-6772528 Msa1046280:intron 20.0%
!!! ATATAAATGAAGGGTATAAT+TGG + chr7_2:6772565-6772584 None:intergenic 20.0%
!! TGTATATGAGCTTATATTTA+GGG + chr7_2:6772836-6772855 None:intergenic 20.0%
!! TTGTATATGAGCTTATATTT+AGG + chr7_2:6772837-6772856 None:intergenic 20.0%
!! AAGCTCATATACAAATTATT+AGG - chr7_2:6772843-6772862 Msa1046280:CDS 20.0%
!!! TAAGTTAGAAGTATTAATCA+GGG + chr7_2:6772892-6772911 None:intergenic 20.0%
!!! ATAAGTTAGAAGTATTAATC+AGG + chr7_2:6772893-6772912 None:intergenic 20.0%
!! TCACATATATTAAGAAAAGT+AGG + chr7_2:6772923-6772942 None:intergenic 20.0%
!! AAAAGAAGGAAAATAATAAG+AGG + chr7_2:6773038-6773057 None:intergenic 20.0%
!! TATTAGAGAAAGAAAACATA+AGG + chr7_2:6773124-6773143 None:intergenic 20.0%
!! NNNNNNNGTTATGACATGAT+TGG - chr7_2:6773405-6773424 Msa1046280:CDS 20.0%
!! ATAGCTCAGTTAAAAAAAAA+AGG - chr7_2:6773543-6773562 Msa1046280:intron 20.0%
!! TCAATGAAATATGATATTAG+AGG + chr7_2:6773685-6773704 None:intergenic 20.0%
!!! ATATTTTACTTGTTAACAGA+TGG + chr7_2:6773980-6773999 None:intergenic 20.0%
!!! ATAGTTACATCAAATCATTT+TGG + chr7_2:6774060-6774079 None:intergenic 20.0%
!! ATTTGACAAAGATAATAAGA+AGG - chr7_2:6774174-6774193 Msa1046280:intron 20.0%
!! TTTGACAAAGATAATAAGAA+GGG - chr7_2:6774175-6774194 Msa1046280:intron 20.0%
!! GTTATTGTTTATTAAGTCAT+TGG + chr7_2:6774667-6774686 None:intergenic 20.0%
!!! CAAATTCTGAGATTTATTTT+AGG + chr7_2:6774753-6774772 None:intergenic 20.0%
!! CTAAAATAAATCTCAGAATT+TGG - chr7_2:6774751-6774770 Msa1046280:intron 20.0%
!! GTAATGTTTATAACTAAAGT+GGG + chr7_2:6774828-6774847 None:intergenic 20.0%
!! AGTAATGTTTATAACTAAAG+TGG + chr7_2:6774829-6774848 None:intergenic 20.0%
!!! TTGATAAAAATTCTTTTTGG+TGG + chr7_2:6775213-6775232 None:intergenic 20.0%
!! TTGTAATATTGTTAAACAAG+AGG - chr7_2:6775273-6775292 Msa1046280:intron 20.0%
!!! TTTTATCAATAAGAAGCATT+GGG + chr7_2:6776545-6776564 None:intergenic 20.0%
!!! TAAGTTATTTTTGTCTAAGT+AGG - chr7_2:6776574-6776593 Msa1046280:five_prime_UTR 20.0%
! ATAGTAACATAGATACCAAT+TGG + chr7_2:6767434-6767453 None:intergenic 25.0%
! AGAAAAGAAAAAAAACACTC+AGG + chr7_2:6768001-6768020 None:intergenic 25.0%
!!! TATTTGAGTTGATTTTGTGT+TGG + chr7_2:6768239-6768258 None:intergenic 25.0%
! TATGTATATGTTTGGTATCA+CGG + chr7_2:6768427-6768446 None:intergenic 25.0%
! GATTTCACTATGTATATGTT+TGG + chr7_2:6768435-6768454 None:intergenic 25.0%
!! ACTATTATTGTCTTTGAGAA+AGG - chr7_2:6768757-6768776 Msa1046280:intron 25.0%
!! ACTGATAAACATGTTGATTA+TGG + chr7_2:6768845-6768864 None:intergenic 25.0%
!!! ACTGGTTTTATTGAAACTTT+TGG - chr7_2:6769212-6769231 Msa1046280:intron 25.0%
! ATATTGTTGTACAAAAGATG+TGG - chr7_2:6769307-6769326 Msa1046280:intron 25.0%
! GAATTAGGATATATTTGTGA+TGG - chr7_2:6769391-6769410 Msa1046280:intron 25.0%
! ACACTAGCATAAGAAAAAAA+AGG - chr7_2:6769510-6769529 Msa1046280:intron 25.0%
!! TTTTGAATTGTATATTGCAG+TGG - chr7_2:6769735-6769754 Msa1046280:intron 25.0%
!!! ATAAACTTTAAAGCTGACAA+AGG + chr7_2:6769931-6769950 None:intergenic 25.0%
! ATTACAAACTGTATGCTAAA+CGG - chr7_2:6770156-6770175 Msa1046280:intron 25.0%
!! ATTGTTTTCGGTTAACAAAA+TGG + chr7_2:6770198-6770217 None:intergenic 25.0%
!!! GTAAAAAGTTGTGTTTTTGA+AGG + chr7_2:6770245-6770264 None:intergenic 25.0%
!! ATTTTGTAGTATACATGAAG+AGG - chr7_2:6770538-6770557 Msa1046280:CDS 25.0%
!! TTTTGTAGTATACATGAAGA+GGG - chr7_2:6770539-6770558 Msa1046280:CDS 25.0%
! CATTCAATCATGTATGATAT+AGG + chr7_2:6770574-6770593 None:intergenic 25.0%
!! ACAAACTTAAATTAATGGAC+AGG + chr7_2:6770737-6770756 None:intergenic 25.0%
! AGAAAAATTAACAGAACACA+CGG + chr7_2:6770861-6770880 None:intergenic 25.0%
! GTCTAAATTAATATTCTGTG+TGG - chr7_2:6771127-6771146 Msa1046280:intron 25.0%
! GACATTCACATATAAATACT+AGG + chr7_2:6771344-6771363 None:intergenic 25.0%
! AATTTCAAGACATGAATTCA+TGG - chr7_2:6771455-6771474 Msa1046280:intron 25.0%
! ATTTCAAGACATGAATTCAT+GGG - chr7_2:6771456-6771475 Msa1046280:intron 25.0%
!!! TGGTTTGTTAGATTATTAAC+TGG - chr7_2:6771588-6771607 Msa1046280:intron 25.0%
!! TGGTTTTCTATTTTGTATGT+TGG - chr7_2:6771764-6771783 Msa1046280:intron 25.0%
!!! AAGTATTTCTTTTTCGTAAC+AGG - chr7_2:6771842-6771861 Msa1046280:intron 25.0%
!!! AGTATTTCTTTTTCGTAACA+GGG - chr7_2:6771843-6771862 Msa1046280:intron 25.0%
! CATTCAGATACCTTAATATT+GGG + chr7_2:6771909-6771928 None:intergenic 25.0%
! ATACAGAACTAAGTAAGAAA+GGG + chr7_2:6771966-6771985 None:intergenic 25.0%
! TCTTATGTGTCTAACATAAT+AGG - chr7_2:6772014-6772033 Msa1046280:intron 25.0%
!!! TAAGACTAGTTTCCAATTTT+AGG - chr7_2:6772387-6772406 Msa1046280:intron 25.0%
!!! AAGACTAGTTTCCAATTTTA+GGG - chr7_2:6772388-6772407 Msa1046280:intron 25.0%
! TGGAATTGTTCCTATTATAA+TGG + chr7_2:6772657-6772676 None:intergenic 25.0%
! AAAGTGAAAATCCCTATAAT+AGG - chr7_2:6772759-6772778 Msa1046280:CDS 25.0%
! AAGTGAAAATCCCTATAATA+GGG - chr7_2:6772760-6772779 Msa1046280:CDS 25.0%
!!! AAGTTAGAAGTATTAATCAG+GGG + chr7_2:6772891-6772910 None:intergenic 25.0%
! TATATGTGAAATTGGTCAAA+AGG - chr7_2:6772934-6772953 Msa1046280:intron 25.0%
! ATATGTGAAATTGGTCAAAA+GGG - chr7_2:6772935-6772954 Msa1046280:intron 25.0%
! AACACACATTATACAAAAGA+AGG + chr7_2:6773052-6773071 None:intergenic 25.0%
!!! GTATAATGTGTGTTGATTAA+TGG - chr7_2:6773058-6773077 Msa1046280:intron 25.0%
! TTGCAACAAATATATAAGAC+AGG + chr7_2:6773186-6773205 None:intergenic 25.0%
!! TTGCATTTACATTTGAGATT+GGG + chr7_2:6773498-6773517 None:intergenic 25.0%
! ATATCACTACAAAATATGGT+AGG + chr7_2:6773606-6773625 None:intergenic 25.0%
! ACGAATATCACTACAAAATA+TGG + chr7_2:6773610-6773629 None:intergenic 25.0%
!! AAAGTTGAAACGATTTTACT+GGG - chr7_2:6773632-6773651 Msa1046280:intron 25.0%
! TTTATTGGTCAAAGTTCATA+TGG - chr7_2:6773831-6773850 Msa1046280:intron 25.0%
! TTATTGGTCAAAGTTCATAT+GGG - chr7_2:6773832-6773851 Msa1046280:intron 25.0%
! AATATATTCCTAAAGACAGA+TGG + chr7_2:6774026-6774045 None:intergenic 25.0%
!!! AATAAGAAGGGAGTATTAAA+TGG - chr7_2:6774187-6774206 Msa1046280:intron 25.0%
!! AAATGGATATTTTCTTTGGT+TGG - chr7_2:6774204-6774223 Msa1046280:intron 25.0%
!!! TATTTTCTTTGGTTGGTAAT+TGG - chr7_2:6774211-6774230 Msa1046280:intron 25.0%
! AAGAAAAGTCACACTTAAAA+CGG + chr7_2:6774300-6774319 None:intergenic 25.0%
! ATTCTCTATATATTCTACTG+CGG + chr7_2:6774357-6774376 None:intergenic 25.0%
! GAATAAAACCAAGAAATAGT+TGG + chr7_2:6774599-6774618 None:intergenic 25.0%
! AAGTCATTGGAGTAAAAATA+CGG + chr7_2:6774654-6774673 None:intergenic 25.0%
! CATATGCTTTCTTAATCATA+AGG - chr7_2:6774725-6774744 Msa1046280:intron 25.0%
! TAAATCTCAGAATTTGGATT+TGG - chr7_2:6774757-6774776 Msa1046280:intron 25.0%
! CTAACTCAATAATGCAAAAT+CGG - chr7_2:6774781-6774800 Msa1046280:intron 25.0%
! TTGTCTATAATTAAAGTGAG+AGG + chr7_2:6775026-6775045 None:intergenic 25.0%
! AATCTCAAATTTGAAGACAA+GGG + chr7_2:6775057-6775076 None:intergenic 25.0%
!! AACACTTCTGTTTGATTTAT+TGG - chr7_2:6775155-6775174 Msa1046280:CDS 25.0%
! TAATTTATGAAGAGAGTGAT+AGG + chr7_2:6775460-6775479 None:intergenic 25.0%
! AAGCAAACAACATATTAAGT+AGG + chr7_2:6775488-6775507 None:intergenic 25.0%
! TGCTTCCAATATTCTATAAA+TGG - chr7_2:6775503-6775522 Msa1046280:intron 25.0%
!!! TTACACACTATTGTTTTGTA+AGG + chr7_2:6775576-6775595 None:intergenic 25.0%
! TACAAAACAATAGTGTGTAA+TGG - chr7_2:6775576-6775595 Msa1046280:intron 25.0%
! TGTCATCAATCATGATATAA+GGG + chr7_2:6775890-6775909 None:intergenic 25.0%
!!! TACACTAGGTAATTAGTTTT+TGG - chr7_2:6776005-6776024 Msa1046280:intron 25.0%
! AATGGAGTACAAAATAAATG+CGG - chr7_2:6776273-6776292 Msa1046280:intron 25.0%
!!! CTTTTATCAATAAGAAGCAT+TGG + chr7_2:6776546-6776565 None:intergenic 25.0%
AGCAACGAACTATAATACAA+TGG - chr7_2:6767272-6767291 Msa1046280:three_prime_UTR 30.0%
! TTTTTCTTCTTCTTCTCTGT+CGG - chr7_2:6767305-6767324 Msa1046280:three_prime_UTR 30.0%
AACATAGATACCAATTGGAA+GGG + chr7_2:6767429-6767448 None:intergenic 30.0%
TAACATAGATACCAATTGGA+AGG + chr7_2:6767430-6767449 None:intergenic 30.0%
CATGTGAAGAAAACACAAAA+AGG + chr7_2:6767700-6767719 None:intergenic 30.0%
TTGGCAATAGCTTATTCATA+AGG + chr7_2:6768220-6768239 None:intergenic 30.0%
!! GATTTTGTTATCATCACAAC+TGG + chr7_2:6768651-6768670 None:intergenic 30.0%
!! TGTCTTTGAGAAAGGTATTT+AGG - chr7_2:6768765-6768784 Msa1046280:intron 30.0%
! TTATGTGTTGGATTGGAATT+AGG - chr7_2:6769376-6769395 Msa1046280:intron 30.0%
GAAATTGCAAACTGATCTAA+TGG - chr7_2:6769482-6769501 Msa1046280:intron 30.0%
AGGTAATTTACATTACCATG+TGG - chr7_2:6769530-6769549 Msa1046280:intron 30.0%
TGCATATTTATCCTAGATGT+CGG - chr7_2:6769680-6769699 Msa1046280:intron 30.0%
CTATAGTGAATTATATCCCA+AGG - chr7_2:6769891-6769910 Msa1046280:intron 30.0%
! TTTTCGGTTAACAAAATGGT+AGG + chr7_2:6770194-6770213 None:intergenic 30.0%
TGCTGATATGACAAATACAA+CGG + chr7_2:6770369-6770388 None:intergenic 30.0%
ATGTAATTCATTCCTTTCCA+TGG - chr7_2:6770479-6770498 Msa1046280:intron 30.0%
CTTTGTCAATTTGCAAAAGT+GGG + chr7_2:6770513-6770532 None:intergenic 30.0%
TCTTTGTCAATTTGCAAAAG+TGG + chr7_2:6770514-6770533 None:intergenic 30.0%
AGTTGCATGAAGGAAAAAAT+AGG - chr7_2:6770609-6770628 Msa1046280:intron 30.0%
CATGAAGGAAAAAATAGGAT+AGG - chr7_2:6770614-6770633 Msa1046280:intron 30.0%
GATATTGATATTTGTGCTCT+TGG + chr7_2:6770668-6770687 None:intergenic 30.0%
GTATTACAAGCCTTACTTTA+AGG - chr7_2:6770782-6770801 Msa1046280:intron 30.0%
TTACAAATCTACATTTGAGC+AGG - chr7_2:6770897-6770916 Msa1046280:intron 30.0%
GTTAAAACTTCAAAGAATGG+TGG + chr7_2:6771543-6771562 None:intergenic 30.0%
GAACTTGAAGAATAGGTTTA+CGG + chr7_2:6771640-6771659 None:intergenic 30.0%
! TCTGATGTTGTATTTGACTT+TGG + chr7_2:6771697-6771716 None:intergenic 30.0%
CAAATACAACATCAGAATCT+TGG - chr7_2:6771701-6771720 Msa1046280:CDS 30.0%
CCATTCAGATACCTTAATAT+TGG + chr7_2:6771910-6771929 None:intergenic 30.0%
! CCAATATTAAGGTATCTGAA+TGG - chr7_2:6771907-6771926 Msa1046280:CDS 30.0%
GATACAGAACTAAGTAAGAA+AGG + chr7_2:6771967-6771986 None:intergenic 30.0%
! TAGTACTTTAGTTCCTTACT+TGG - chr7_2:6772150-6772169 Msa1046280:intron 30.0%
AAAGTAGAAAATGAAGTCAG+AGG - chr7_2:6772278-6772297 Msa1046280:intron 30.0%
AAACGAAGATACCCTAAAAT+TGG + chr7_2:6772402-6772421 None:intergenic 30.0%
CATGTATCCCCTTTATATAT+AGG + chr7_2:6772519-6772538 None:intergenic 30.0%
! ATAAAGGGGATACATGATTT+TGG - chr7_2:6772523-6772542 Msa1046280:intron 30.0%
! TAAAGGGGATACATGATTTT+GGG - chr7_2:6772524-6772543 Msa1046280:intron 30.0%
AGCATACAATTAAGCACAAT+AGG - chr7_2:6772736-6772755 Msa1046280:CDS 30.0%
!!! TCAAAGGGTGCTTTTAATTA+GGG + chr7_2:6772800-6772819 None:intergenic 30.0%
!!! TTCAAAGGGTGCTTTTAATT+AGG + chr7_2:6772801-6772820 None:intergenic 30.0%
!!! GGACAAGACTTTTTTTCAAA+GGG + chr7_2:6772815-6772834 None:intergenic 30.0%
! CATTTGAGATTGGGAAAATA+AGG + chr7_2:6773489-6773508 None:intergenic 30.0%
! CTTGCATTTACATTTGAGAT+TGG + chr7_2:6773499-6773518 None:intergenic 30.0%
! GAAAGTTGAAACGATTTTAC+TGG - chr7_2:6773631-6773650 Msa1046280:intron 30.0%
! AAGTTGAAACGATTTTACTG+GGG - chr7_2:6773633-6773652 Msa1046280:intron 30.0%
AACTTTGACCAATAAAAGAG+AGG + chr7_2:6773827-6773846 None:intergenic 30.0%
AAAGTTCATATGGGTATAGT+GGG - chr7_2:6773841-6773860 Msa1046280:intron 30.0%
TGGTATAAGCTAACATAATG+AGG + chr7_2:6773935-6773954 None:intergenic 30.0%
TCATTTATGTACGTTTGACA+CGG - chr7_2:6774111-6774130 Msa1046280:intron 30.0%
GATTTGAACTTTGTACCTTA+AGG + chr7_2:6774466-6774485 None:intergenic 30.0%
TGTTTCATTGCGTACATTTA+AGG - chr7_2:6774573-6774592 Msa1046280:intron 30.0%
! ATTTAAGGCCAACTATTTCT+TGG - chr7_2:6774588-6774607 Msa1046280:intron 30.0%
CTTCTTACTTATTAAGCAGT+GGG + chr7_2:6774689-6774708 None:intergenic 30.0%
TCTTCTTACTTATTAAGCAG+TGG + chr7_2:6774690-6774709 None:intergenic 30.0%
! CGATTTTGCATTATTGAGTT+AGG + chr7_2:6774783-6774802 None:intergenic 30.0%
!! TAATGCAAAATCGGTTTGTA+AGG - chr7_2:6774790-6774809 Msa1046280:intron 30.0%
ATGTTTATAACTAAAGTGGG+AGG + chr7_2:6774825-6774844 None:intergenic 30.0%
GAATCTCAAATTTGAAGACA+AGG + chr7_2:6775058-6775077 None:intergenic 30.0%
!! TCAAACAGAAGTGTTAAATG+AGG + chr7_2:6775150-6775169 None:intergenic 30.0%
!! AAAAATTCTTTTTGGTGGCT+TGG + chr7_2:6775208-6775227 None:intergenic 30.0%
ACAAAAGCTGTAAAACACTT+TGG + chr7_2:6775257-6775276 None:intergenic 30.0%
ATATACAATACAAGCAACAG+AGG - chr7_2:6775329-6775348 Msa1046280:intron 30.0%
CAAACAACATATTAAGTAGG+TGG + chr7_2:6775485-6775504 None:intergenic 30.0%
TGATCAATAGTTGCTATGTT+GGG + chr7_2:6775658-6775677 None:intergenic 30.0%
ATGATCAATAGTTGCTATGT+TGG + chr7_2:6775659-6775678 None:intergenic 30.0%
! ATCATCTGTTTCTTTCTGTT+TGG - chr7_2:6775674-6775693 Msa1046280:CDS 30.0%
! AATTGGACTTTAGGAAATCA+TGG + chr7_2:6775774-6775793 None:intergenic 30.0%
CAAGTAACTAATTGGACTTT+AGG + chr7_2:6775783-6775802 None:intergenic 30.0%
CTAAAGTCCAATTAGTTACT+TGG - chr7_2:6775781-6775800 Msa1046280:intron 30.0%
CTGTCATCAATCATGATATA+AGG + chr7_2:6775891-6775910 None:intergenic 30.0%
! ATATTTGGGACTATATCTGA+TGG - chr7_2:6775942-6775961 Msa1046280:intron 30.0%
AACTAATTACCTAGTGTACA+TGG + chr7_2:6776003-6776022 None:intergenic 30.0%
!!! AGTTTTTGGCTGAAATTATG+TGG - chr7_2:6776019-6776038 Msa1046280:intron 30.0%
AATTAAATCAAACAATGGCC+CGG + chr7_2:6776082-6776101 None:intergenic 30.0%
ACTTAAACTTCTGAATCTGA+AGG + chr7_2:6776198-6776217 None:intergenic 30.0%
ACAAAATAAATGCGGTGATT+AGG - chr7_2:6776281-6776300 Msa1046280:intron 30.0%
ATAGCTCTCTTGTAAAAAGA+AGG - chr7_2:6776353-6776372 Msa1046280:intron 30.0%
TAAAAAGAAGGAAAGACAGA+AGG - chr7_2:6776365-6776384 Msa1046280:CDS 30.0%
AGAAAAACTATGAATTGCCT+GGG + chr7_2:6776395-6776414 None:intergenic 30.0%
AAGAAAAACTATGAATTGCC+TGG + chr7_2:6776396-6776415 None:intergenic 30.0%
ATGCACCTTACAGTATAAAA+GGG - chr7_2:6776464-6776483 Msa1046280:CDS 30.0%
! TGTATCCCTTTTATACTGTA+AGG + chr7_2:6776472-6776491 None:intergenic 30.0%
CATTGGGTTTAGAAAGTTAA+AGG + chr7_2:6776529-6776548 None:intergenic 30.0%
TAGAAGTAACTACTACACCA+CGG - chr7_2:6767205-6767224 Msa1046280:three_prime_UTR 35.0%
TTATTGCAGGATTTGGACTT+GGG + chr7_2:6767405-6767424 None:intergenic 35.0%
ACATAGATACCAATTGGAAG+GGG + chr7_2:6767428-6767447 None:intergenic 35.0%
CAATTCAATTCAATTGCTGC+AGG - chr7_2:6767489-6767508 Msa1046280:three_prime_UTR 35.0%
AATTCAATTGCTGCAGGTTA+AGG - chr7_2:6767495-6767514 Msa1046280:three_prime_UTR 35.0%
!! ACGCTATTTTCAGCTTTTTC+TGG + chr7_2:6767592-6767611 None:intergenic 35.0%
GTAGGATTAGAGAAAAGAAC+AGG + chr7_2:6767622-6767641 None:intergenic 35.0%
CTGTTCATCTTCAACTTCAA+AGG - chr7_2:6767648-6767667 Msa1046280:CDS 35.0%
CATAAGGACTTATCATGCTA+AGG + chr7_2:6768204-6768223 None:intergenic 35.0%
!! AGAAGTGCCTAACTGTAAAT+GGG + chr7_2:6768267-6768286 None:intergenic 35.0%
AATACACGTGATTATGCTTG+AGG + chr7_2:6768294-6768313 None:intergenic 35.0%
!! GTAGCCTATGTTTGTTATCA+GGG - chr7_2:6768374-6768393 Msa1046280:intron 35.0%
TATATGTTTGGTATCACGGT+GGG + chr7_2:6768423-6768442 None:intergenic 35.0%
GTGATGATAACAAAATCAGC+AGG - chr7_2:6768654-6768673 Msa1046280:intron 35.0%
CTCAATGCATCTTTAACATC+TGG - chr7_2:6768684-6768703 Msa1046280:intron 35.0%
ATGCATCTTTAACATCTGGA+AGG - chr7_2:6768688-6768707 Msa1046280:intron 35.0%
GTAAAGATCTTACTCTCACA+TGG + chr7_2:6769074-6769093 None:intergenic 35.0%
TGTGAGAGTAAGATCTTTAC+AGG - chr7_2:6769074-6769093 Msa1046280:intron 35.0%
! GGTTTTTCTACTGTGTTTGT+AGG + chr7_2:6769159-6769178 None:intergenic 35.0%
TAGAGTGAAGTCTTTCTCAA+TGG + chr7_2:6769180-6769199 None:intergenic 35.0%
ACTCTAAATGCTTGTCTAAC+TGG - chr7_2:6769194-6769213 Msa1046280:intron 35.0%
CATTTATGTGTTTGCATGAG+AGG + chr7_2:6769590-6769609 None:intergenic 35.0%
CTCTCATGCAAACACATAAA+TGG - chr7_2:6769588-6769607 Msa1046280:intron 35.0%
TCTCATCTCCTTTGTTCAAA+GGG + chr7_2:6769633-6769652 None:intergenic 35.0%
ATCTCATCTCCTTTGTTCAA+AGG + chr7_2:6769634-6769653 None:intergenic 35.0%
CAAAGGAGATGAGATAAACA+TGG - chr7_2:6769639-6769658 Msa1046280:intron 35.0%
GCATATTTATCCTAGATGTC+GGG - chr7_2:6769681-6769700 Msa1046280:intron 35.0%
! TTTTCCACATGGTCTACATA+TGG - chr7_2:6769708-6769727 Msa1046280:intron 35.0%
TTAACCATATGTAGACCATG+TGG + chr7_2:6769715-6769734 None:intergenic 35.0%
! ACTTCTCAGTTGCATTTTTG+TGG - chr7_2:6769794-6769813 Msa1046280:intron 35.0%
ATATTTGAGCAATGCTGAGA+TGG - chr7_2:6770040-6770059 Msa1046280:intron 35.0%
TATTTGAGCAATGCTGAGAT+GGG - chr7_2:6770041-6770060 Msa1046280:intron 35.0%
GAAGAACAACAGAACAAGAA+AGG + chr7_2:6770396-6770415 None:intergenic 35.0%
TGTTCTTCTTCATGTCATCT+TGG - chr7_2:6770408-6770427 Msa1046280:intron 35.0%
TCATGTCATCTTGGTTTATG+TGG - chr7_2:6770417-6770436 Msa1046280:intron 35.0%
TTCATACACAAGTTGCATGA+AGG - chr7_2:6770599-6770618 Msa1046280:intron 35.0%
AAAATAGGATAGGAAGAGAG+TGG - chr7_2:6770624-6770643 Msa1046280:intron 35.0%
GATTGGTGTACCTTAAAGTA+AGG + chr7_2:6770795-6770814 None:intergenic 35.0%
ATCTACATTTGAGCAGGAAA+TGG - chr7_2:6770903-6770922 Msa1046280:intron 35.0%
AGCAGGAAATGGCATAATAT+TGG - chr7_2:6770914-6770933 Msa1046280:intron 35.0%
ATAGAAATCTCCCCAAATAG+AGG + chr7_2:6770959-6770978 None:intergenic 35.0%
CATGAATCTTATTCGTGGAT+TGG - chr7_2:6771040-6771059 Msa1046280:intron 35.0%
!! TGAAACTTACAAGAGTGTCT+TGG + chr7_2:6771066-6771085 None:intergenic 35.0%
AATATTCTGTGTGGCATTCA+CGG - chr7_2:6771136-6771155 Msa1046280:intron 35.0%
ATCCTCTCAACTTCAAATGA+CGG + chr7_2:6771260-6771279 None:intergenic 35.0%
! TGGAAGTGTGATAGGATTAT+AGG + chr7_2:6771368-6771387 None:intergenic 35.0%
TAATTTCAGCTCACTGTATG+TGG + chr7_2:6771388-6771407 None:intergenic 35.0%
GAAGAATAGGTTTACGGAAA+AGG + chr7_2:6771634-6771653 None:intergenic 35.0%
TACAACATCAGAATCTTGGT+TGG - chr7_2:6771705-6771724 Msa1046280:CDS 35.0%
TCAATCACACAGCTAATCAT+TGG + chr7_2:6771799-6771818 None:intergenic 35.0%
GGCTCAATTACCCAATATTA+AGG - chr7_2:6771896-6771915 Msa1046280:CDS 35.0%
!!! CTTTGCCTACGACATTTTTT+GGG - chr7_2:6772062-6772081 Msa1046280:intron 35.0%
! AGTTCAGTTTGCTTCTTCAA+AGG - chr7_2:6772181-6772200 Msa1046280:intron 35.0%
CTTCAAAGGTAGAGTAGTAT+AGG - chr7_2:6772195-6772214 Msa1046280:intron 35.0%
!! GAGAAAGTATCATTTAGACC+TGG - chr7_2:6772300-6772319 Msa1046280:intron 35.0%
GTTTCTTATATTCCAACACC+AGG + chr7_2:6772321-6772340 None:intergenic 35.0%
TTATATTGCTCCTCTTGTAG+TGG + chr7_2:6772677-6772696 None:intergenic 35.0%
AGGGAGTAATCCCTATTATA+GGG + chr7_2:6772773-6772792 None:intergenic 35.0%
!!! GGGACAAGACTTTTTTTCAA+AGG + chr7_2:6772816-6772835 None:intergenic 35.0%
! TATTAATCAGGGGCATGTTT+GGG + chr7_2:6772881-6772900 None:intergenic 35.0%
! TATGATGAGTCCTCTTTTAC+AGG - chr7_2:6773211-6773230 Msa1046280:intron 35.0%
! TTCCTCGTCTTTTTGATACA+TGG - chr7_2:6773285-6773304 Msa1046280:intron 35.0%
! TCCTCGTCTTTTTGATACAT+GGG - chr7_2:6773286-6773305 Msa1046280:intron 35.0%
!! NGTTATGACATGATTGGCTT+TGG - chr7_2:6773411-6773430 Msa1046280:CDS 35.0%
TTTGGAGATATCATCTTTCC+TGG - chr7_2:6773429-6773448 Msa1046280:CDS 35.0%
AATTCAGTACCTATGAGCAA+AGG + chr7_2:6773466-6773485 None:intergenic 35.0%
GAATCTTCTTGCATACAAAG+TGG + chr7_2:6773734-6773753 None:intergenic 35.0%
CAATAAAAGAGAGGAAGTGA+GGG + chr7_2:6773818-6773837 None:intergenic 35.0%
CAAAGTTCATATGGGTATAG+TGG - chr7_2:6773840-6773859 Msa1046280:intron 35.0%
! TTGGTAATTGGCTATGGAAT+TGG - chr7_2:6774223-6774242 Msa1046280:intron 35.0%
AAAGTCACACTTAAAACGGA+AGG + chr7_2:6774296-6774315 None:intergenic 35.0%
CGGATTTAACACTAAGCTAA+AGG + chr7_2:6774337-6774356 None:intergenic 35.0%
CTTTGTACCTTAAGGTTACA+AGG + chr7_2:6774458-6774477 None:intergenic 35.0%
! ATAAGCAACAGTTCTGATGA+AGG + chr7_2:6774550-6774569 None:intergenic 35.0%
!!! GGTTTTATTCACTCATTGAC+TGG - chr7_2:6774609-6774628 Msa1046280:intron 35.0%
! ACTCATTGACTGGTTATAGT+TGG - chr7_2:6774619-6774638 Msa1046280:intron 35.0%
ATTCACCTTACAAGTGAGTT+AGG + chr7_2:6774992-6775011 None:intergenic 35.0%
TAACTCACTTGTAAGGTGAA+TGG - chr7_2:6774991-6775010 Msa1046280:intron 35.0%
GATAAGTTCTCAACAAAAGC+TGG + chr7_2:6775118-6775137 None:intergenic 35.0%
TACAAGCTGCAAATGAGAAT+AGG - chr7_2:6775379-6775398 Msa1046280:intron 35.0%
!!! TAAGGTTTTAAATGCCACAC+GGG + chr7_2:6775558-6775577 None:intergenic 35.0%
!!! GTAAGGTTTTAAATGCCACA+CGG + chr7_2:6775559-6775578 None:intergenic 35.0%
GTCGAATCCAAGTAACTAAT+TGG + chr7_2:6775791-6775810 None:intergenic 35.0%
!! ACTTGGATTCGACTAGTTTA+TGG - chr7_2:6775798-6775817 Msa1046280:intron 35.0%
ACAGTGTCTTTCTACATTTC+AGG - chr7_2:6775907-6775926 Msa1046280:intron 35.0%
!!! CATTTTAGCTCTCATATTGC+CGG - chr7_2:6776060-6776079 Msa1046280:intron 35.0%
!!! ATTTTAGCTCTCATATTGCC+GGG - chr7_2:6776061-6776080 Msa1046280:intron 35.0%
AACAGGTGTCTTTATCATAC+TGG - chr7_2:6776107-6776126 Msa1046280:intron 35.0%
ACAGGTGTCTTTATCATACT+GGG - chr7_2:6776108-6776127 Msa1046280:intron 35.0%
TTGAAATGATCACAGCTCAA+TGG - chr7_2:6776255-6776274 Msa1046280:CDS 35.0%
CATGCACCTTACAGTATAAA+AGG - chr7_2:6776463-6776482 Msa1046280:CDS 35.0%
CAGTATAAAAGGGATACAGT+AGG - chr7_2:6776474-6776493 Msa1046280:CDS 35.0%
GTTATTGCAGGATTTGGACT+TGG + chr7_2:6767406-6767425 None:intergenic 40.0%
TGCAGGTTAAGGTGAAAAAC+TGG - chr7_2:6767506-6767525 Msa1046280:three_prime_UTR 40.0%
GCAGGTTAAGGTGAAAAACT+GGG - chr7_2:6767507-6767526 Msa1046280:three_prime_UTR 40.0%
!! GAGGAAGGTGTTATTCAAAG+CGG - chr7_2:6767538-6767557 Msa1046280:three_prime_UTR 40.0%
! ATTTTGTGAGCTGATGACTG+TGG - chr7_2:6767970-6767989 Msa1046280:intron 40.0%
TCTGTTGCACTATGTATTCG+TGG - chr7_2:6768045-6768064 Msa1046280:intron 40.0%
CTGTTGCACTATGTATTCGT+GGG - chr7_2:6768046-6768065 Msa1046280:intron 40.0%
TGTTGCACTATGTATTCGTG+GGG - chr7_2:6768047-6768066 Msa1046280:intron 40.0%
AAAGCTACCATTGCACAATC+TGG - chr7_2:6768087-6768106 Msa1046280:intron 40.0%
GGACTTATCATGCTAAGGAA+AGG + chr7_2:6768199-6768218 None:intergenic 40.0%
TAAGCGACCCATTTACAGTT+AGG - chr7_2:6768257-6768276 Msa1046280:intron 40.0%
!! GAGAAGTGCCTAACTGTAAA+TGG + chr7_2:6768268-6768287 None:intergenic 40.0%
!! CGTAGCCTATGTTTGTTATC+AGG - chr7_2:6768373-6768392 Msa1046280:intron 40.0%
!! CCTATGTTTGTTATCAGGGT+GGG - chr7_2:6768378-6768397 Msa1046280:intron 40.0%
GTATATGTTTGGTATCACGG+TGG + chr7_2:6768424-6768443 None:intergenic 40.0%
CTTGTCAGATCTTGTTGAGA+TGG - chr7_2:6768590-6768609 Msa1046280:intron 40.0%
TGGAATTGTGATGTTTGCCT+CGG + chr7_2:6768631-6768650 None:intergenic 40.0%
TCTTTAACATCTGGAAGGAG+AGG - chr7_2:6768693-6768712 Msa1046280:intron 40.0%
TTTATTCCCCTTCCCTTAGT+TGG - chr7_2:6768994-6769013 Msa1046280:intron 40.0%
ACAAGTCCTAAGCCAACTAA+GGG + chr7_2:6769009-6769028 None:intergenic 40.0%
AACAAGTCCTAAGCCAACTA+AGG + chr7_2:6769010-6769029 None:intergenic 40.0%
TTGTACAAAAGATGTGGAGC+AGG - chr7_2:6769313-6769332 Msa1046280:intron 40.0%
TGTACAAAAGATGTGGAGCA+GGG - chr7_2:6769314-6769333 Msa1046280:intron 40.0%
GTCAGTGCATTAAAACCACA+TGG + chr7_2:6769548-6769567 None:intergenic 40.0%
! AAGGGTGCATCAAAATGAGA+AGG + chr7_2:6769615-6769634 None:intergenic 40.0%
TTGATGCACCCTTTGAACAA+AGG - chr7_2:6769622-6769641 Msa1046280:intron 40.0%
GGAAAATAAACCCGACATCT+AGG + chr7_2:6769694-6769713 None:intergenic 40.0%
!! TGTCGGGTTTATTTTCCACA+TGG - chr7_2:6769697-6769716 Msa1046280:intron 40.0%
! CTCAGTTGCATTTTTGTGGT+TGG - chr7_2:6769798-6769817 Msa1046280:intron 40.0%
!! TTTTTGTGGTTGGTGTCTGT+TGG - chr7_2:6769808-6769827 Msa1046280:intron 40.0%
CAATTGTGTGTGCTTCACTA+TGG - chr7_2:6769833-6769852 Msa1046280:intron 40.0%
GGATTGCAAGGAAAAACCTT+GGG + chr7_2:6769910-6769929 None:intergenic 40.0%
AGGATTGCAAGGAAAAACCT+TGG + chr7_2:6769911-6769930 None:intergenic 40.0%
AAAGCTGACAAAGGATTGCA+AGG + chr7_2:6769922-6769941 None:intergenic 40.0%
ATCCAAACAGTGCTTACTCA+AGG + chr7_2:6769985-6770004 None:intergenic 40.0%
! AGTAAGCACTGTTTGGATGT+GGG - chr7_2:6769987-6770006 Msa1046280:intron 40.0%
TGTATCAGATACACTGACCT+TGG - chr7_2:6770067-6770086 Msa1046280:intron 40.0%
! ATTGTACTTTTCTGCATCGC+TGG - chr7_2:6770446-6770465 Msa1046280:intron 40.0%
TTATGTCCAGAGAGAGAGAT+TGG + chr7_2:6770812-6770831 None:intergenic 40.0%
ACCGTGAATGTACCTCTATT+TGG - chr7_2:6770944-6770963 Msa1046280:intron 40.0%
! CCCAAATAGAGGTACATTCA+CGG + chr7_2:6770948-6770967 None:intergenic 40.0%
CCGTGAATGTACCTCTATTT+GGG - chr7_2:6770945-6770964 Msa1046280:intron 40.0%
CGTGAATGTACCTCTATTTG+GGG - chr7_2:6770946-6770965 Msa1046280:intron 40.0%
! GGAGATTTCTATTTTCTCGC+TGG - chr7_2:6770967-6770986 Msa1046280:intron 40.0%
CTTATTCTGTGTGGCATTTG+CGG - chr7_2:6770997-6771016 Msa1046280:intron 40.0%
CTCGACATGAATCTTATTCG+TGG - chr7_2:6771035-6771054 Msa1046280:intron 40.0%
! ACTGTATGTGGAAGTGTGAT+AGG + chr7_2:6771376-6771395 None:intergenic 40.0%
AACAAACCACTCGAGCAATT+GGG + chr7_2:6771577-6771596 None:intergenic 40.0%
TAACAAACCACTCGAGCAAT+TGG + chr7_2:6771578-6771597 None:intergenic 40.0%
AATGCTTCAGGAAGCTCAAT+AGG + chr7_2:6771733-6771752 None:intergenic 40.0%
GATGATAACAGTCTTGCAGT+TGG - chr7_2:6771875-6771894 Msa1046280:intron 40.0%
CCAAAAAATGTCGTAGGCAA+AGG + chr7_2:6772064-6772083 None:intergenic 40.0%
!!! CCTTTGCCTACGACATTTTT+TGG - chr7_2:6772061-6772080 Msa1046280:intron 40.0%
GAACACCCAAAAAATGTCGT+AGG + chr7_2:6772070-6772089 None:intergenic 40.0%
ACACTTTCGTGGAATATCAG+CGG + chr7_2:6772099-6772118 None:intergenic 40.0%
GTATCATTTAGACCTGGTGT+TGG - chr7_2:6772306-6772325 Msa1046280:intron 40.0%
AGGAACAATTCCACTACAAG+AGG - chr7_2:6772664-6772683 Msa1046280:intron 40.0%
GAGGGAGTAATCCCTATTAT+AGG + chr7_2:6772774-6772793 None:intergenic 40.0%
!! TGCTTTTAATTAGGGACGGA+GGG + chr7_2:6772792-6772811 None:intergenic 40.0%
!! AGGGTGCTTTTAATTAGGGA+CGG + chr7_2:6772796-6772815 None:intergenic 40.0%
! ATTAATCAGGGGCATGTTTG+GGG + chr7_2:6772880-6772899 None:intergenic 40.0%
! GTATTAATCAGGGGCATGTT+TGG + chr7_2:6772882-6772901 None:intergenic 40.0%
GTCAAAAGGGCTTATAGTGA+CGG - chr7_2:6772948-6772967 Msa1046280:intron 40.0%
! CGAGGAAATCTCAAAAGCAT+AGG + chr7_2:6773272-6773291 None:intergenic 40.0%
! CCTCGTCTTTTTGATACATG+GGG - chr7_2:6773287-6773306 Msa1046280:intron 40.0%
TGCTTGTTTCCTTTGCTCAT+AGG - chr7_2:6773454-6773473 Msa1046280:CDS 40.0%
TAATGGCAAGTGATAAGACC+AGG + chr7_2:6773759-6773778 None:intergenic 40.0%
TGTCTGCATGTGTCTAGTAA+TGG + chr7_2:6773776-6773795 None:intergenic 40.0%
CCAATAAAAGAGAGGAAGTG+AGG + chr7_2:6773819-6773838 None:intergenic 40.0%
! CCTCACTTCCTCTCTTTTAT+TGG - chr7_2:6773816-6773835 Msa1046280:intron 40.0%
TGATATTCTGACTGGATGCT+TGG + chr7_2:6773955-6773974 None:intergenic 40.0%
AGATGGTGTGATATTCTGAC+TGG + chr7_2:6773963-6773982 None:intergenic 40.0%
ATTCCTAAAGACAGATGGCT+CGG + chr7_2:6774021-6774040 None:intergenic 40.0%
!! CTTTGGTTGGTAATTGGCTA+TGG - chr7_2:6774217-6774236 Msa1046280:intron 40.0%
!! AGCTTAGCCTTGTAACCTTA+AGG - chr7_2:6774448-6774467 Msa1046280:intron 40.0%
TGCTCCAAATGTCTAGTGTT+GGG + chr7_2:6774893-6774912 None:intergenic 40.0%
ATGCTCCAAATGTCTAGTGT+TGG + chr7_2:6774894-6774913 None:intergenic 40.0%
! AACACTAGACATTTGGAGCA+TGG - chr7_2:6774893-6774912 Msa1046280:intron 40.0%
GAGTCTATCCAAGATCTGTT+GGG + chr7_2:6774942-6774961 None:intergenic 40.0%
AGAGTCTATCCAAGATCTGT+TGG + chr7_2:6774943-6774962 None:intergenic 40.0%
TCTAGTACCCTCTTAGCATT+TGG - chr7_2:6774960-6774979 Msa1046280:intron 40.0%
TACCCTCTTAGCATTTGGAT+TGG - chr7_2:6774965-6774984 Msa1046280:intron 40.0%
ACCCTCTTAGCATTTGGATT+GGG - chr7_2:6774966-6774985 Msa1046280:intron 40.0%
CTTGTAAGGTGAATGGTGAA+TGG - chr7_2:6774998-6775017 Msa1046280:intron 40.0%
!! TCTTTTTGGTGGCTTGGAAA+GGG + chr7_2:6775202-6775221 None:intergenic 40.0%
!! TTCTTTTTGGTGGCTTGGAA+AGG + chr7_2:6775203-6775222 None:intergenic 40.0%
ATGTGTGAGAGGAGAAACAA+GGG - chr7_2:6775355-6775374 Msa1046280:intron 40.0%
GTGTTAACCAACACAACTCT+TGG + chr7_2:6775405-6775424 None:intergenic 40.0%
!! GTTGTGTTGGTTAACACTAG+TGG - chr7_2:6775408-6775427 Msa1046280:intron 40.0%
TAGCACTACTATCTCAAGCA+CGG - chr7_2:6775712-6775731 Msa1046280:CDS 40.0%
! AGGCCTCGTTTTCACATATT+TGG - chr7_2:6775927-6775946 Msa1046280:intron 40.0%
! GGCCTCGTTTTCACATATTT+GGG - chr7_2:6775928-6775947 Msa1046280:intron 40.0%
GTCCCAAATATGTGAAAACG+AGG + chr7_2:6775933-6775952 None:intergenic 40.0%
TTGGGACTATATCTGATGGA+CGG - chr7_2:6775946-6775965 Msa1046280:intron 40.0%
! CTATATCTGATGGACGGAAA+TGG - chr7_2:6775952-6775971 Msa1046280:intron 40.0%
GTGTACATGGAACAAGGTAA+AGG + chr7_2:6775990-6776009 None:intergenic 40.0%
TACCTTGTTCCATGTACACT+AGG - chr7_2:6775991-6776010 Msa1046280:intron 40.0%
TACCTAGTGTACATGGAACA+AGG + chr7_2:6775996-6776015 None:intergenic 40.0%
ATGGAGCACAACGATAGTTA+TGG + chr7_2:6776329-6776348 None:intergenic 40.0%
TTACAAGAGAGCTATGACGA+TGG + chr7_2:6776348-6776367 None:intergenic 40.0%
CACGGTAGTTAGTTAGATCG+CGG - chr7_2:6767223-6767242 Msa1046280:three_prime_UTR 45.0%
ATCGCGTTTCACATCGTTTG+AGG + chr7_2:6767370-6767389 None:intergenic 45.0%
GAAGGGGTTATTGCAGGATT+TGG + chr7_2:6767412-6767431 None:intergenic 45.0%
CAATTGGAAGGGGTTATTGC+AGG + chr7_2:6767418-6767437 None:intergenic 45.0%
CTGCAATAACCCCTTCCAAT+TGG - chr7_2:6767416-6767435 Msa1046280:three_prime_UTR 45.0%
AAGGTGAAAAACTGGGCAGA+TGG - chr7_2:6767514-6767533 Msa1046280:three_prime_UTR 45.0%
AGCGGTATGACTGCAAGATT+TGG - chr7_2:6767556-6767575 Msa1046280:three_prime_UTR 45.0%
GAAGATGAACAGCAGTCAGT+AGG + chr7_2:6767640-6767659 None:intergenic 45.0%
GTTGCACTATGTATTCGTGG+GGG - chr7_2:6768048-6768067 Msa1046280:intron 45.0%
!! GCCTATGTTTGTTATCAGGG+TGG - chr7_2:6768377-6768396 Msa1046280:intron 45.0%
CCCACCCTGATAACAAACAT+AGG + chr7_2:6768381-6768400 None:intergenic 45.0%
AACATCTGGAAGGAGAGGTA+AGG - chr7_2:6768698-6768717 Msa1046280:intron 45.0%
ACATCTGGAAGGAGAGGTAA+GGG - chr7_2:6768699-6768718 Msa1046280:intron 45.0%
! AGGTAAGGGCTTCGACTTTT+AGG - chr7_2:6768713-6768732 Msa1046280:intron 45.0%
! GGTAAGGGCTTCGACTTTTA+GGG - chr7_2:6768714-6768733 Msa1046280:intron 45.0%
AAGCCTTGATGTGTTGGACA+GGG + chr7_2:6768898-6768917 None:intergenic 45.0%
ACAACCAAGCCTTGATGTGT+TGG + chr7_2:6768904-6768923 None:intergenic 45.0%
TCCTAAGCCAACTAAGGGAA+GGG + chr7_2:6769004-6769023 None:intergenic 45.0%
ACTCTCCTCTTAAAGCTGTG+TGG - chr7_2:6769048-6769067 Msa1046280:intron 45.0%
TTGCACCAAACCTACCAAGT+TGG - chr7_2:6769268-6769287 Msa1046280:intron 45.0%
CTTGTCCAACTTGGTAGGTT+TGG + chr7_2:6769276-6769295 None:intergenic 45.0%
! CAAACCTACCAAGTTGGACA+AGG - chr7_2:6769274-6769293 Msa1046280:intron 45.0%
TGTTTGCATGAGAGGAGACA+TGG + chr7_2:6769582-6769601 None:intergenic 45.0%
GCAACTGAGAAGTCTACAAG+TGG + chr7_2:6769787-6769806 None:intergenic 45.0%
CTAACTACTCCAGAGAAGTC+TGG - chr7_2:6769862-6769881 Msa1046280:intron 45.0%
! TGCCTTGAGTAAGCACTGTT+TGG - chr7_2:6769980-6769999 Msa1046280:intron 45.0%
! GAGTAAGCACTGTTTGGATG+TGG - chr7_2:6769986-6770005 Msa1046280:intron 45.0%
! GTAAGCACTGTTTGGATGTG+GGG - chr7_2:6769988-6770007 Msa1046280:intron 45.0%
TGTAGATAGTACACGTGCCA+AGG + chr7_2:6770087-6770106 None:intergenic 45.0%
TTTCTGCATCGCTGGTATTG+AGG - chr7_2:6770454-6770473 Msa1046280:intron 45.0%
AAAAGTGGGAGCAAAAGCCA+TGG + chr7_2:6770499-6770518 None:intergenic 45.0%
GGCAGTGTTCTTATTCTGTG+TGG - chr7_2:6770988-6771007 Msa1046280:intron 45.0%
! TGTGGCATTTGCGGTTTTCT+GGG - chr7_2:6771006-6771025 Msa1046280:intron 45.0%
! GTCCGTCATTTGAAGTTGAG+AGG - chr7_2:6771255-6771274 Msa1046280:intron 45.0%
GTATAGACGCTAGCACATAC+AGG - chr7_2:6771416-6771435 Msa1046280:intron 45.0%
AACTTCCAGTGCAATGCTTC+AGG + chr7_2:6771745-6771764 None:intergenic 45.0%
!! TGAAGCATTGCACTGGAAGT+TGG - chr7_2:6771744-6771763 Msa1046280:CDS 45.0%
CTGCAATCATGACACTTTCG+TGG + chr7_2:6772110-6772129 None:intergenic 45.0%
GAACTGAGACAGTCCAAGTA+AGG + chr7_2:6772166-6772185 None:intergenic 45.0%
!! GTGCTTTTAATTAGGGACGG+AGG + chr7_2:6772793-6772812 None:intergenic 45.0%
! TTAATCAGGGGCATGTTTGG+GGG + chr7_2:6772879-6772898 None:intergenic 45.0%
CCCCATGTATCAAAAAGACG+AGG + chr7_2:6773290-6773309 None:intergenic 45.0%
GCAAAGGAAACAAGCAAACC+AGG + chr7_2:6773450-6773469 None:intergenic 45.0%
GTATGCAAGAAGATTCTGCC+TGG - chr7_2:6773738-6773757 Msa1046280:intron 45.0%
TTTCCGAGCCATCTGTCTTT+AGG - chr7_2:6774015-6774034 Msa1046280:CDS 45.0%
ATCTTGATGTGCTAGCTCAG+TGG - chr7_2:6774421-6774440 Msa1046280:intron 45.0%
TACAAAGTTCAAATCCCCCG+AGG - chr7_2:6774471-6774490 Msa1046280:intron 45.0%
!!! TGCCATTTTACAACCGTCCT+CGG + chr7_2:6774491-6774510 None:intergenic 45.0%
! AATGTCTAGTGTTGGGCATG+AGG + chr7_2:6774886-6774905 None:intergenic 45.0%
CATGCCCAACACTAGACATT+TGG - chr7_2:6774886-6774905 Msa1046280:intron 45.0%
GCCCAATCCAAATGCTAAGA+GGG + chr7_2:6774970-6774989 None:intergenic 45.0%
TTGGGCCTAACTCACTTGTA+AGG - chr7_2:6774984-6775003 Msa1046280:intron 45.0%
GATGTGTGAGAGGAGAAACA+AGG - chr7_2:6775354-6775373 Msa1046280:intron 45.0%
GAATAGGCCAAGAGTTGTGT+TGG - chr7_2:6775395-6775414 Msa1046280:intron 45.0%
AATGCCACACGGGAAAAAAC+AGG + chr7_2:6775548-6775567 None:intergenic 45.0%
CAATAGTTGCTATGTTGGGC+TGG + chr7_2:6775654-6775673 None:intergenic 45.0%
ATCATACTGGGATGTGTGAG+AGG - chr7_2:6776120-6776139 Msa1046280:intron 45.0%
!! CTGAAGAGCCTTTGGAACTA+TGG - chr7_2:6776147-6776166 Msa1046280:CDS 45.0%
TTCTGAATCTGAAGGCTCTG+TGG + chr7_2:6776190-6776209 None:intergenic 45.0%
!! ATGATAAAAATTTAATAAAA+TGG + chr7_2:6767918-6767937 None:intergenic 5.0%
CGCGATCTAACTAACTACCG+TGG + chr7_2:6767225-6767244 None:intergenic 50.0%
GAAAAACTGGGCAGATGGTG+AGG - chr7_2:6767519-6767538 Msa1046280:three_prime_UTR 50.0%
GTCTACGTGTGTGTCTGTGT+CGG - chr7_2:6767939-6767958 Msa1046280:intron 50.0%
GCTACCATTGCACAATCTGG+AGG - chr7_2:6768090-6768109 Msa1046280:intron 50.0%
AGCACCTCCAGATTGTGCAA+TGG + chr7_2:6768097-6768116 None:intergenic 50.0%
! GGTTTGCACTGATAGTACCG+AGG - chr7_2:6768611-6768630 Msa1046280:intron 50.0%
TGACCCTGTCCAACACATCA+AGG - chr7_2:6768892-6768911 Msa1046280:intron 50.0%
CAAGCCTTGATGTGTTGGAC+AGG + chr7_2:6768899-6768918 None:intergenic 50.0%
CTGTCCAACACATCAAGGCT+TGG - chr7_2:6768897-6768916 Msa1046280:intron 50.0%
CCTAAGCCAACTAAGGGAAG+GGG + chr7_2:6769003-6769022 None:intergenic 50.0%
GTCCTAAGCCAACTAAGGGA+AGG + chr7_2:6769005-6769024 None:intergenic 50.0%
!! CATGGCCACACAGCTTTAAG+AGG + chr7_2:6769056-6769075 None:intergenic 50.0%
AACGCCTTGTCCAACTTGGT+AGG + chr7_2:6769281-6769300 None:intergenic 50.0%
TACGAACGCCTTGTCCAACT+TGG + chr7_2:6769285-6769304 None:intergenic 50.0%
AAGTCTACAAGTGGTCGAGG+TGG + chr7_2:6769778-6769797 None:intergenic 50.0%
GAGAAGTCTACAAGTGGTCG+AGG + chr7_2:6769781-6769800 None:intergenic 50.0%
TAGCGTTCACCAGACTTCTC+TGG + chr7_2:6769874-6769893 None:intergenic 50.0%
! TGTGGGGACATGCTTTTGTC+AGG - chr7_2:6770004-6770023 Msa1046280:intron 50.0%
CAAAATGTTGCCGCAGCAAG+AGG - chr7_2:6770302-6770321 Msa1046280:intron 50.0%
ATCAGAACTGCCTCTTGCTG+CGG + chr7_2:6770315-6770334 None:intergenic 50.0%
TGGGAGCAAAAGCCATGGAA+AGG + chr7_2:6770494-6770513 None:intergenic 50.0%
GGTACACCAATCTCTCTCTC+TGG - chr7_2:6770803-6770822 Msa1046280:intron 50.0%
! GTGTGGCATTTGCGGTTTTC+TGG - chr7_2:6771005-6771024 Msa1046280:intron 50.0%
TAACCACCCAATTGCTCGAG+TGG - chr7_2:6771568-6771587 Msa1046280:intron 50.0%
AAACCACTCGAGCAATTGGG+TGG + chr7_2:6771574-6771593 None:intergenic 50.0%
!! AGCTTCCTGAAGCATTGCAC+TGG - chr7_2:6771737-6771756 Msa1046280:CDS 50.0%
! CGTAGGCAAAGGCACAAGAA+AGG + chr7_2:6772053-6772072 None:intergenic 50.0%
! GGGGATACATGATTTTGGGC+TGG - chr7_2:6772528-6772547 Msa1046280:intron 50.0%
! TAATCAGGGGCATGTTTGGG+GGG + chr7_2:6772878-6772897 None:intergenic 50.0%
CCTCGAGCAACCTGTAAAAG+AGG + chr7_2:6773224-6773243 None:intergenic 50.0%
! CCTCTTTTACAGGTTGCTCG+AGG - chr7_2:6773221-6773240 Msa1046280:intron 50.0%
AAGTTCAAATCCCCCGAGGA+CGG - chr7_2:6774475-6774494 Msa1046280:intron 50.0%
! CATTTTACAACCGTCCTCGG+GGG + chr7_2:6774488-6774507 None:intergenic 50.0%
! CCATTTTACAACCGTCCTCG+GGG + chr7_2:6774489-6774508 None:intergenic 50.0%
!! GCCATTTTACAACCGTCCTC+GGG + chr7_2:6774490-6774509 None:intergenic 50.0%
TCGCCTACAATTGGACCACT+CGG + chr7_2:6774919-6774938 None:intergenic 50.0%
TCTGTTGGGTCGCCTACAAT+TGG + chr7_2:6774928-6774947 None:intergenic 50.0%
GGCCCAATCCAAATGCTAAG+AGG + chr7_2:6774971-6774990 None:intergenic 50.0%
AACAGAGGCAGATGTGTGAG+AGG - chr7_2:6775344-6775363 Msa1046280:intron 50.0%
!!! CGTACCTGTTTTTTCCCGTG+TGG - chr7_2:6775541-6775560 Msa1046280:intron 50.0%
! GGAACAAGGTAAAGGAGTGC+AGG + chr7_2:6775982-6776001 None:intergenic 50.0%
GGTCTGTGCCATAGTTCCAA+AGG + chr7_2:6776158-6776177 None:intergenic 50.0%
ATCTGAAGGCTCTGTGGACA+AGG + chr7_2:6776184-6776203 None:intergenic 50.0%
CGGTGATTAGGACAAACACC+AGG - chr7_2:6776293-6776312 Msa1046280:intron 50.0%
AGGACAAACACCAGGTGTAC+AGG - chr7_2:6776301-6776320 Msa1046280:intron 50.0%
AGTTATGGAGCCTGTACACC+TGG + chr7_2:6776314-6776333 None:intergenic 50.0%
GAAAGACAGAAGGAGAACCC+AGG - chr7_2:6776375-6776394 Msa1046280:CDS 50.0%
AACTGGGCAGATGGTGAGGA+AGG - chr7_2:6767523-6767542 Msa1046280:three_prime_UTR 55.0%
!! GCACAATCTGGAGGTGCTAC+TGG - chr7_2:6768099-6768118 Msa1046280:intron 55.0%
! CCCCTTCCCTTAGTTGGCTT+AGG - chr7_2:6769000-6769019 Msa1046280:intron 55.0%
ACAGGTTGCTCGAGGTGACA+AGG - chr7_2:6773229-6773248 Msa1046280:intron 55.0%
CCCCGAGGACGGTTGTAAAA+TGG - chr7_2:6774486-6774505 Msa1046280:intron 55.0%
! GTCTAGTGTTGGGCATGAGG+TGG + chr7_2:6774883-6774902 None:intergenic 55.0%
! ACATTTGGAGCATGGCCGAG+TGG - chr7_2:6774901-6774920 Msa1046280:intron 55.0%
TGGCCGAGTGGTCCAATTGT+AGG - chr7_2:6774913-6774932 Msa1046280:intron 55.0%
GTAGGCGACCCAACAGATCT+TGG - chr7_2:6774931-6774950 Msa1046280:intron 55.0%
GAGGTGAGCTGAAGAGCCTT+TGG - chr7_2:6776139-6776158 Msa1046280:CDS 55.0%
AAGGCTCTGTGGACAAGGAC+GGG + chr7_2:6776179-6776198 None:intergenic 55.0%
GAAGGCTCTGTGGACAAGGA+CGG + chr7_2:6776180-6776199 None:intergenic 55.0%
GTTGCTCGAGGTGACAAGGC+TGG - chr7_2:6773233-6773252 Msa1046280:intron 60.0%
GCTCGAGGTGACAAGGCTGG+TGG - chr7_2:6773236-6773255 Msa1046280:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 6767174 6776625 6767174 ID=Msa1046280;Name=Msa1046280
chr7_2 mRNA 6767174 6776625 6767174 ID=Msa1046280-mRNA-1;Parent=Msa1046280;Name=Msa1046280-mRNA-1;_AED=0.18;_eAED=0.18;_QI=117|0.91|0.92|1|1|1|13|410|491
chr7_2 exon 6767174 6767687 6767174 ID=Msa1046280-mRNA-1:exon:1580;Parent=Msa1046280-mRNA-1
chr7_2 exon 6767787 6767870 6767787 ID=Msa1046280-mRNA-1:exon:1579;Parent=Msa1046280-mRNA-1
chr7_2 exon 6770491 6770566 6770491 ID=Msa1046280-mRNA-1:exon:1578;Parent=Msa1046280-mRNA-1
chr7_2 exon 6771671 6771763 6771671 ID=Msa1046280-mRNA-1:exon:1577;Parent=Msa1046280-mRNA-1
chr7_2 exon 6771882 6771935 6771882 ID=Msa1046280-mRNA-1:exon:1576;Parent=Msa1046280-mRNA-1
chr7_2 exon 6772724 6772880 6772724 ID=Msa1046280-mRNA-1:exon:1575;Parent=Msa1046280-mRNA-1
chr7_2 exon 6772996 6773030 6772996 ID=Msa1046280-mRNA-1:exon:1574;Parent=Msa1046280-mRNA-1
chr7_2 exon 6773324 6773503 6773324 ID=Msa1046280-mRNA-1:exon:1573;Parent=Msa1046280-mRNA-1
chr7_2 exon 6773887 6774044 6773887 ID=Msa1046280-mRNA-1:exon:1572;Parent=Msa1046280-mRNA-1
chr7_2 exon 6775085 6775201 6775085 ID=Msa1046280-mRNA-1:exon:1571;Parent=Msa1046280-mRNA-1
chr7_2 exon 6775652 6775763 6775652 ID=Msa1046280-mRNA-1:exon:1570;Parent=Msa1046280-mRNA-1
chr7_2 exon 6776130 6776288 6776130 ID=Msa1046280-mRNA-1:exon:1569;Parent=Msa1046280-mRNA-1
chr7_2 exon 6776362 6776625 6776362 ID=Msa1046280-mRNA-1:exon:1568;Parent=Msa1046280-mRNA-1
chr7_2 five_prime_UTR 6776509 6776625 6776509 ID=Msa1046280-mRNA-1:five_prime_utr;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6776362 6776508 6776362 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6776130 6776288 6776130 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6775652 6775763 6775652 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6775085 6775201 6775085 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6773887 6774044 6773887 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6773324 6773503 6773324 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6772996 6773030 6772996 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6772724 6772880 6772724 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6771882 6771935 6771882 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6771671 6771763 6771671 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6770491 6770566 6770491 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6767787 6767870 6767787 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 CDS 6767584 6767687 6767584 ID=Msa1046280-mRNA-1:cds;Parent=Msa1046280-mRNA-1
chr7_2 three_prime_UTR 6767174 6767583 6767174 ID=Msa1046280-mRNA-1:three_prime_utr;Parent=Msa1046280-mRNA-1
Gene Sequence

>Msa1046280

ATGGCGTCTTCTTCTTTTTCTTCTTCTTCTCTGTCGGTGCTGTTGTTGTTGCTGTTTGCAACAGCTGCTTCTTCTGCCTCAAACGATGTGAAACGCGATGACGATAGAGCTCCCAAGTCCAAATCCTGCAATAACCCCTTCCAATTGGTTAAGGTGAAAAACTGGGCAGATGGTGAGGAAGGTGTTATTCAAAGCGGTATGACTGCAAGATTTGGTTCTTCGTTACCAGAAAAAGCTGAAAATAGCGTCAGAACTCCTGTTCTTTTCTCTAATCCTACTGACTGCTGTTCATCTTCAACTTCAAAGTTAGTTGACTCTGTTGCACTATGTATTCGTGGGGGTTGTGATTTTCAACTTAAAGCTACCATTGCACAATCTGGAGGTGCTACTGGCGTTTTGATCATAAATAATGAAGAGGATCTTGTTGAGATGGTTTGCACTGATAGTACCGAGGCAAACATCACAATTCCAGTTGTGATGATAACAAAATCAGCAGGAGAAGCTCTCAATGCATCTTTAACATCTGGAAGGAGAGTGGAAGTTCTGTTATATGCACCACCTCGACCACTTGTAGACTTCTCAGTTGCATTTTTGTGGTTGGTGTCTGTTGGAACAATTGTGTGTGCTTCACTATGGTCAGATCTAACTACTCCAGAGAAGTCTGGTGAACGCTATAGTGAATTATATCCCAAGGAATCTCAAAATGTTGCCGCAGCAAGAGGCAGTTCTGATAAGCAAGTTCTTAACATTAATTCAAAGGCTGCCGTTGTATTTGTCATATCAGCATCTACCTTTCTTGTTCTGTTGTTCTTCTTCATGTCATCTTGGTTTATGTGGTTGCTCATTGTACTTTTCTGCATCGCTGGTATTGAGGGGATGCACAATTGTATTACAAGCCTTACTTTAAGGAAATGGCATAATATTGGTCAAAAGACCGTGAATGTACCTCTATTTGGGGAGATTTCTATTTTCTCGCTGGCAGTGTTCTTATTCTGTGTGGCATTTGCGGTTTTCTGGGCTGCTACTCGACATGAATCTTATTCGTGGATTGGCCAAGACACTCTTGGAATCTGTTTGATGATAACAGTCTTGCAGTTGGCTCAATTACCCAATATTAAGGTTGCAACTGTGCTCCTTTCTTGTGCCTTTGCCTACGACATTTTTTGGGTGTTCATATCTCCGCTGATATTCCACGAAAGTGTCATGATTGCAGTTGCTCGAGGTGACAAGGCTGGTGGTGAAGCAATTCCTATGCTTTTGAGATTTCCTCGTCTTTTTGATACATGGGGCCTCGTTTTCACATATTTGGGACTATATCTGATGGACGGAAATGGACAACCTGCACTCCTTTACCTTGTTCCATGTACACTAGGTGTCTTTATCATACTGGGATGTGTGAGAGGTGAGCTGAAGAGCCTTTGGAACTATGGCACAGACCCGTCCTTGTCCACAGAGCCTTCAGATTCAGAAGTTTAA

Protein sequence

>Msa1046280

MASSSFSSSSLSVLLLLLFATAASSASNDVKRDDDRAPKSKSCNNPFQLVKVKNWADGEEGVIQSGMTARFGSSLPEKAENSVRTPVLFSNPTDCCSSSTSKLVDSVALCIRGGCDFQLKATIAQSGGATGVLIINNEEDLVEMVCTDSTEANITIPVVMITKSAGEALNASLTSGRRVEVLLYAPPRPLVDFSVAFLWLVSVGTIVCASLWSDLTTPEKSGERYSELYPKESQNVAAARGSSDKQVLNINSKAAVVFVISASTFLVLLFFFMSSWFMWLLIVLFCIAGIEGMHNCITSLTLRKWHNIGQKTVNVPLFGEISIFSLAVFLFCVAFAVFWAATRHESYSWIGQDTLGICLMITVLQLAQLPNIKVATVLLSCAFAYDIFWVFISPLIFHESVMIAVARGDKAGGEAIPMLLRFPRLFDTWGLVFTYLGLYLMDGNGQPALLYLVPCTLGVFIILGCVRGELKSLWNYGTDPSLSTEPSDSEV*