Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530940 | XP_013454707.1 | 67.259 | 394 | 93 | 4 | 569 | 936 | 75 | 458 | 1.48e-147 | 460 |
| Msa0530940 | XP_013454707.1 | 90.702 | 570 | 50 | 2 | 1 | 569 | 1 | 568 | 0.0 | 978 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530940 | sp|Q9CAC4|MYOB2_ARATH | 56.044 | 91 | 40 | 0 | 282 | 372 | 420 | 510 | 1.06e-20 | 101 |
| Msa0530940 | sp|Q9CAC4|MYOB2_ARATH | 47.059 | 102 | 54 | 0 | 775 | 876 | 411 | 512 | 5.86e-18 | 92.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530940 | A0A072UHY6 | 67.259 | 394 | 93 | 4 | 569 | 936 | 75 | 458 | 7.09e-148 | 460 |
| Msa0530940 | A0A072UHY6 | 90.702 | 570 | 50 | 2 | 1 | 569 | 1 | 568 | 0.0 | 978 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0530940 | 0.831023 | 2.110789e-55 | -8.615850e-47 |
| Msa0017510 | Msa0530940 | 0.826145 | 3.185456e-54 | -8.615850e-47 |
| Msa0031340 | Msa0530940 | 0.802409 | 5.688205e-49 | -8.615850e-47 |
| Msa0043980 | Msa0530940 | 0.800950 | 1.132905e-48 | -8.615850e-47 |
| Msa0044000 | Msa0530940 | 0.805562 | 1.257184e-49 | -8.615850e-47 |
| Msa0062860 | Msa0530940 | 0.802336 | 5.887553e-49 | -8.615850e-47 |
| Msa0079070 | Msa0530940 | 0.800248 | 1.575759e-48 | -8.615850e-47 |
| Msa0101700 | Msa0530940 | 0.808323 | 3.276393e-50 | -8.615850e-47 |
| Msa0107180 | Msa0530940 | 0.802028 | 6.814250e-49 | -8.615850e-47 |
| Msa0127800 | Msa0530940 | 0.800182 | 1.624663e-48 | -8.615850e-47 |
| Msa0157290 | Msa0530940 | 0.826901 | 2.102988e-54 | -8.615850e-47 |
| Msa0165210 | Msa0530940 | 0.800863 | 1.180168e-48 | -8.615850e-47 |
| Msa0165220 | Msa0530940 | 0.800493 | 1.404359e-48 | -8.615850e-47 |
| Msa0166870 | Msa0530940 | 0.805838 | 1.100031e-49 | -8.615850e-47 |
| Msa0180500 | Msa0530940 | 0.816101 | 6.578578e-52 | -8.615850e-47 |
| Msa0208090 | Msa0530940 | 0.808266 | 3.369535e-50 | -8.615850e-47 |
| Msa0211150 | Msa0530940 | 0.809102 | 2.233903e-50 | -8.615850e-47 |
| Msa0212990 | Msa0530940 | 0.805250 | 1.461477e-49 | -8.615850e-47 |
| Msa0215680 | Msa0530940 | 0.802463 | 5.544682e-49 | -8.615850e-47 |
| Msa0220580 | Msa0530940 | 0.813287 | 2.762969e-51 | -8.615850e-47 |
| Msa0223010 | Msa0530940 | 0.826970 | 2.024578e-54 | -8.615850e-47 |
| Msa0373450 | Msa0530940 | 0.801964 | 7.021862e-49 | -8.615850e-47 |
| Msa0379640 | Msa0530940 | 0.802183 | 6.329811e-49 | -8.615850e-47 |
| Msa0397750 | Msa0530940 | 0.828371 | 9.330580e-55 | -8.615850e-47 |
| Msa0426640 | Msa0530940 | 0.800041 | 1.735789e-48 | -8.615850e-47 |
| Msa0431690 | Msa0530940 | 0.800037 | 1.739468e-48 | -8.615850e-47 |
| Msa0435230 | Msa0530940 | 0.805705 | 1.173167e-49 | -8.615850e-47 |
| Msa0455760 | Msa0530940 | 0.816022 | 6.849097e-52 | -8.615850e-47 |
| Msa0479340 | Msa0530940 | 0.816969 | 4.203643e-52 | -8.615850e-47 |
| Msa0258760 | Msa0530940 | 0.806323 | 8.697318e-50 | -8.615850e-47 |
| Msa0260680 | Msa0530940 | 0.805524 | 1.280865e-49 | -8.615850e-47 |
| Msa0275000 | Msa0530940 | 0.828710 | 7.726594e-55 | -8.615850e-47 |
| Msa0280090 | Msa0530940 | 0.822835 | 1.915374e-53 | -8.615850e-47 |
| Msa0285450 | Msa0530940 | 0.812395 | 4.331887e-51 | -8.615850e-47 |
| Msa0291540 | Msa0530940 | 0.819672 | 1.027215e-52 | -8.615850e-47 |
| Msa0292930 | Msa0530940 | 0.804246 | 2.368660e-49 | -8.615850e-47 |
| Msa0315290 | Msa0530940 | 0.817209 | 3.713419e-52 | -8.615850e-47 |
| Msa0319170 | Msa0530940 | 0.808978 | 2.373862e-50 | -8.615850e-47 |
| Msa0321310 | Msa0530940 | 0.823599 | 1.270321e-53 | -8.615850e-47 |
| Msa0339620 | Msa0530940 | 0.833412 | 5.413051e-56 | -8.615850e-47 |
| Msa0340470 | Msa0530940 | 0.826075 | 3.310109e-54 | -8.615850e-47 |
| Msa0359030 | Msa0530940 | 0.807617 | 4.630839e-50 | -8.615850e-47 |
| Msa0493000 | Msa0530940 | 0.805696 | 1.178196e-49 | -8.615850e-47 |
| Msa0498650 | Msa0530940 | 0.812384 | 4.355367e-51 | -8.615850e-47 |
| Msa0512750 | Msa0530940 | 0.821871 | 3.206149e-53 | -8.615850e-47 |
| Msa0529040 | Msa0530940 | 0.829108 | 6.188371e-55 | -8.615850e-47 |
| Msa0530940 | Msa0562440 | 0.813766 | 2.167904e-51 | -8.615850e-47 |
| Msa0530940 | Msa0585230 | 0.816147 | 6.423669e-52 | -8.615850e-47 |
| Msa0530940 | Msa0602390 | 0.854149 | 1.491827e-61 | -8.615850e-47 |
| Msa0530940 | Msa0610430 | 0.813566 | 2.398483e-51 | -8.615850e-47 |
| Msa0530940 | Msa0616160 | 0.814492 | 1.498707e-51 | -8.615850e-47 |
| Msa0530940 | Msa0621490 | 0.810748 | 9.880011e-51 | -8.615850e-47 |
| Msa0530940 | Msa0648080 | 0.804386 | 2.214247e-49 | -8.615850e-47 |
| Msa0530940 | Msa0663380 | 0.809147 | 2.184395e-50 | -8.615850e-47 |
| Msa0530940 | Msa0663810 | 0.810925 | 9.045540e-51 | -8.615850e-47 |
| Msa0530940 | Msa0663920 | 0.818767 | 1.650848e-52 | -8.615850e-47 |
| Msa0530940 | Msa0664950 | 0.819064 | 1.413038e-52 | -8.615850e-47 |
| Msa0530940 | Msa0681270 | 0.804003 | 2.660565e-49 | -8.615850e-47 |
| Msa0530940 | Msa0688070 | 0.805935 | 1.049591e-49 | -8.615850e-47 |
| Msa0530940 | Msa0692830 | 0.802485 | 5.485158e-49 | -8.615850e-47 |
| Msa0530940 | Msa0692950 | 0.805701 | 1.175687e-49 | -8.615850e-47 |
| Msa0530940 | Msa0703050 | 0.800143 | 1.654839e-48 | -8.615850e-47 |
| Msa0530940 | Msa0715700 | 0.800557 | 1.362657e-48 | -8.615850e-47 |
| Msa0530940 | Msa0731940 | 0.801074 | 1.068725e-48 | -8.615850e-47 |
| Msa0530940 | Msa0735170 | 0.807393 | 5.168082e-50 | -8.615850e-47 |
| Msa0530940 | Msa0743720 | 0.833636 | 4.758637e-56 | -8.615850e-47 |
| Msa0530940 | Msa0753720 | 0.801783 | 7.650867e-49 | -8.615850e-47 |
| Msa0530940 | Msa0766630 | 0.801693 | 7.982635e-49 | -8.615850e-47 |
| Msa0530940 | Msa0804230 | 0.812202 | 4.772489e-51 | -8.615850e-47 |
| Msa0530940 | Msa0832340 | 0.817064 | 4.003412e-52 | -8.615850e-47 |
| Msa0530940 | Msa0880140 | 0.823662 | 1.227976e-53 | -8.615850e-47 |
| Msa0530940 | Msa0888130 | 0.804928 | 1.707071e-49 | -8.615850e-47 |
| Msa0530940 | Msa0897330 | 0.807021 | 6.194784e-50 | -8.615850e-47 |
| Msa0530940 | Msa0925290 | 0.831733 | 1.412036e-55 | -8.615850e-47 |
| Msa0530940 | Msa0927290 | 0.815546 | 8.745635e-52 | -8.615850e-47 |
| Msa0530940 | Msa0927380 | 0.808512 | 2.985873e-50 | -8.615850e-47 |
| Msa0530940 | Msa0935910 | 0.815229 | 1.028714e-51 | -8.615850e-47 |
| Msa0530940 | Msa0945970 | 0.813329 | 2.704437e-51 | -8.615850e-47 |
| Msa0530940 | Msa0947660 | 0.837783 | 4.240724e-57 | -8.615850e-47 |
| Msa0530940 | Msa0953120 | 0.826573 | 2.519637e-54 | -8.615850e-47 |
| Msa0530940 | Msa0959360 | 0.806786 | 6.945947e-50 | -8.615850e-47 |
| Msa0530940 | Msa0966750 | 0.803883 | 2.818051e-49 | -8.615850e-47 |
| Msa0530940 | Msa0969520 | 0.817699 | 2.880099e-52 | -8.615850e-47 |
| Msa0530940 | Msa0969600 | 0.813726 | 2.211662e-51 | -8.615850e-47 |
| Msa0530940 | Msa0974070 | 0.807529 | 4.835596e-50 | -8.615850e-47 |
| Msa0530940 | Msa0976670 | 0.821986 | 3.014971e-53 | -8.615850e-47 |
| Msa0530940 | Msa0991830 | 0.808926 | 2.435800e-50 | -8.615850e-47 |
| Msa0530940 | Msa0998690 | 0.817763 | 2.786163e-52 | -8.615850e-47 |
| Msa0530940 | Msa1000880 | 0.804411 | 2.188172e-49 | -8.615850e-47 |
| Msa0530940 | Msa1003620 | 0.810275 | 1.249631e-50 | -8.615850e-47 |
| Msa0530940 | Msa1012830 | 0.800158 | 1.643361e-48 | -8.615850e-47 |
| Msa0530940 | Msa1014540 | 0.832863 | 7.416875e-56 | -8.615850e-47 |
| Msa0530940 | Msa1037420 | 0.815040 | 1.133238e-51 | -8.615850e-47 |
| Msa0530940 | Msa1039800 | 0.803525 | 3.344829e-49 | -8.615850e-47 |
| Msa0530940 | Msa1042690 | 0.803635 | 3.173690e-49 | -8.615850e-47 |
| Msa0530940 | Msa1046460 | 0.812124 | 4.965526e-51 | -8.615850e-47 |
| Msa0530940 | Msa1052830 | 0.812975 | 3.234432e-51 | -8.615850e-47 |
| Msa0530940 | Msa1069990 | 0.801649 | 8.148843e-49 | -8.615850e-47 |
| Msa0530940 | Msa1075220 | -0.813770 | 2.162774e-51 | -8.615850e-47 |
| Msa0530940 | Msa1075540 | 0.802048 | 6.748282e-49 | -8.615850e-47 |
| Msa0530940 | Msa1075650 | 0.817590 | 3.046825e-52 | -8.615850e-47 |
| Msa0530940 | Msa1081590 | 0.808382 | 3.183259e-50 | -8.615850e-47 |
| Msa0530940 | Msa1082500 | 0.801259 | 9.795287e-49 | -8.615850e-47 |
| Msa0530940 | Msa1090260 | 0.818119 | 2.314688e-52 | -8.615850e-47 |
| Msa0530940 | Msa1100050 | 0.818106 | 2.330995e-52 | -8.615850e-47 |
| Msa0530940 | Msa1109680 | 0.803937 | 2.746236e-49 | -8.615850e-47 |
| Msa0530940 | Msa1121490 | 0.803944 | 2.737139e-49 | -8.615850e-47 |
| Msa0530940 | Msa1154280 | 0.801236 | 9.903004e-49 | -8.615850e-47 |
| Msa0530940 | Msa1162550 | -0.804754 | 1.855941e-49 | -8.615850e-47 |
| Msa0530940 | Msa1172400 | 0.809914 | 1.495041e-50 | -8.615850e-47 |
| Msa0530940 | Msa1174040 | 0.821627 | 3.651337e-53 | -8.615850e-47 |
| Msa0530940 | Msa1181250 | 0.811099 | 8.294693e-51 | -8.615850e-47 |
| Msa0530940 | Msa1181330 | 0.805452 | 1.325845e-49 | -8.615850e-47 |
| Msa0530940 | Msa1199220 | 0.807321 | 5.351944e-50 | -8.615850e-47 |
| Msa0530940 | Msa1210020 | 0.801893 | 7.261913e-49 | -8.615850e-47 |
| Msa0530940 | Msa1224480 | 0.805574 | 1.250091e-49 | -8.615850e-47 |
| Msa0530940 | Msa1241130 | -0.820622 | 6.223425e-53 | -8.615850e-47 |
| Msa0530940 | Msa1244610 | 0.802248 | 6.140056e-49 | -8.615850e-47 |
| Msa0530940 | Msa1269230 | 0.804283 | 2.327210e-49 | -8.615850e-47 |
| Msa0530940 | Msa1276890 | 0.803656 | 3.141879e-49 | -8.615850e-47 |
| Msa0530940 | Msa1277660 | 0.835220 | 1.904451e-56 | -8.615850e-47 |
| Msa0530940 | Msa1280320 | 0.803303 | 3.718157e-49 | -8.615850e-47 |
| Msa0530940 | Msa1284680 | 0.825994 | 3.459699e-54 | -8.615850e-47 |
| Msa0530940 | Msa1287460 | 0.806739 | 7.108083e-50 | -8.615850e-47 |
| Msa0530940 | Msa1298510 | 0.802505 | 5.433970e-49 | -8.615850e-47 |
| Msa0530940 | Msa1327680 | 0.815249 | 1.018453e-51 | -8.615850e-47 |
| Msa0530940 | Msa1331000 | 0.801603 | 8.330184e-49 | -8.615850e-47 |
| Msa0530940 | Msa1332040 | -0.807879 | 4.074614e-50 | -8.615850e-47 |
| Msa0530940 | Msa1359040 | 0.803268 | 3.780963e-49 | -8.615850e-47 |
| Msa0530940 | Msa1360060 | 0.802794 | 4.736843e-49 | -8.615850e-47 |
| Msa0530940 | Msa1372760 | 0.817391 | 3.378151e-52 | -8.615850e-47 |
| Msa0530940 | Msa1373030 | 0.804939 | 1.698054e-49 | -8.615850e-47 |
| Msa0530940 | Msa1395660 | 0.802509 | 5.423888e-49 | -8.615850e-47 |
| Msa0530940 | Msa1403480 | 0.806245 | 9.032695e-50 | -8.615850e-47 |
| Msa0530940 | Msa1420290 | 0.803209 | 3.888944e-49 | -8.615850e-47 |
| Msa0530940 | Msa1427230 | 0.827396 | 1.601368e-54 | -8.615850e-47 |
| Msa0530940 | Msa1452240 | 0.807375 | 5.212068e-50 | -8.615850e-47 |
| Msa0530940 | Msa1459950 | 0.808685 | 2.743231e-50 | -8.615850e-47 |
| Msa0530940 | Msa1460830 | 0.836051 | 1.173581e-56 | -8.615850e-47 |
| Msa0530940 | Msa1466540 | 0.821346 | 4.238867e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530940 | MtrunA17_Chr4g0003911 | 90.702 | 570 | 50 | 2 | 1 | 569 | 1 | 568 | 0.0 | 978 |
| Msa0530940 | MtrunA17_Chr4g0003911 | 67.259 | 394 | 93 | 4 | 569 | 936 | 75 | 458 | 1.36e-151 | 460 |
| Msa0530940 | MtrunA17_Chr4g0003901 | 68.410 | 497 | 110 | 6 | 1 | 485 | 1 | 462 | 0.0 | 598 |
| Msa0530940 | MtrunA17_Chr4g0003901 | 89.516 | 372 | 35 | 3 | 567 | 934 | 72 | 443 | 0.0 | 597 |
| Msa0530940 | MtrunA17_Chr1g0184441 | 40.559 | 143 | 79 | 3 | 735 | 873 | 486 | 626 | 1.28e-17 | 88.2 |
| Msa0530940 | MtrunA17_Chr1g0184441 | 41.667 | 132 | 72 | 2 | 240 | 371 | 500 | 626 | 3.04e-17 | 87.0 |
| Msa0530940 | MtrunA17_Chr8g0376151 | 50.685 | 73 | 36 | 0 | 282 | 354 | 604 | 676 | 5.12e-15 | 80.1 |
| Msa0530940 | MtrunA17_Chr8g0376151 | 43.373 | 83 | 47 | 0 | 774 | 856 | 594 | 676 | 2.75e-14 | 77.4 |
| Msa0530940 | MtrunA17_Chr5g0434681 | 47.945 | 73 | 38 | 0 | 281 | 353 | 623 | 695 | 1.02e-14 | 79.0 |
| Msa0530940 | MtrunA17_Chr5g0434681 | 43.210 | 81 | 46 | 0 | 775 | 855 | 615 | 695 | 6.15e-14 | 76.6 |
| Msa0530940 | MtrunA17_Chr2g0307041 | 42.391 | 92 | 53 | 0 | 292 | 383 | 33 | 124 | 4.07e-14 | 75.5 |
| Msa0530940 | MtrunA17_Chr2g0307041 | 34.426 | 122 | 79 | 1 | 774 | 894 | 13 | 134 | 4.47e-13 | 72.0 |
| Msa0530940 | MtrunA17_Chr4g0049631 | 43.678 | 87 | 45 | 1 | 286 | 372 | 315 | 397 | 1.53e-13 | 73.9 |
| Msa0530940 | MtrunA17_Chr4g0049631 | 40.426 | 94 | 56 | 0 | 780 | 873 | 303 | 396 | 9.18e-13 | 71.6 |
| Msa0530940 | MtrunA17_Chr7g0268041 | 38.843 | 121 | 70 | 1 | 757 | 873 | 43 | 163 | 2.24e-13 | 73.6 |
| Msa0530940 | MtrunA17_Chr7g0268041 | 42.708 | 96 | 55 | 0 | 281 | 376 | 73 | 168 | 3.38e-12 | 70.1 |
| Msa0530940 | MtrunA17_Chr3g0093241 | 40.299 | 134 | 74 | 3 | 241 | 371 | 297 | 427 | 5.44e-13 | 72.8 |
| Msa0530940 | MtrunA17_Chr3g0093241 | 44.554 | 101 | 56 | 0 | 773 | 873 | 327 | 427 | 9.75e-13 | 71.6 |
| Msa0530940 | MtrunA17_Chr1g0176391 | 43.590 | 78 | 42 | 1 | 300 | 375 | 87 | 164 | 7.52e-12 | 68.9 |
| Msa0530940 | MtrunA17_Chr1g0176391 | 44.286 | 70 | 39 | 0 | 804 | 873 | 89 | 158 | 8.13e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530940 | AT4G13630.2 | 32.258 | 589 | 280 | 26 | 1 | 534 | 1 | 525 | 9.74e-48 | 180 |
| Msa0530940 | AT4G13630.2 | 33.548 | 310 | 142 | 11 | 568 | 873 | 69 | 318 | 1.89e-24 | 109 |
| Msa0530940 | AT4G13630.1 | 32.258 | 589 | 280 | 26 | 1 | 534 | 1 | 525 | 9.74e-48 | 180 |
| Msa0530940 | AT4G13630.1 | 33.548 | 310 | 142 | 11 | 568 | 873 | 69 | 318 | 1.89e-24 | 109 |
| Msa0530940 | AT1G04890.1 | 31.068 | 412 | 209 | 10 | 150 | 525 | 7 | 379 | 3.75e-27 | 115 |
| Msa0530940 | AT1G04890.1 | 34.764 | 233 | 119 | 5 | 642 | 873 | 7 | 207 | 9.65e-20 | 93.2 |
| Msa0530940 | AT4G13160.1 | 53.378 | 148 | 51 | 5 | 777 | 917 | 114 | 250 | 1.58e-24 | 105 |
| Msa0530940 | AT4G13160.1 | 62.626 | 99 | 37 | 0 | 275 | 373 | 114 | 212 | 1.26e-22 | 99.4 |
| Msa0530940 | AT1G70750.1 | 56.044 | 91 | 40 | 0 | 282 | 372 | 420 | 510 | 1.07e-21 | 101 |
| Msa0530940 | AT1G70750.1 | 47.059 | 102 | 54 | 0 | 775 | 876 | 411 | 512 | 5.96e-19 | 92.8 |
| Msa0530940 | AT5G16720.1 | 49.425 | 87 | 44 | 0 | 285 | 371 | 367 | 453 | 1.84e-18 | 91.3 |
| Msa0530940 | AT5G16720.1 | 44.000 | 100 | 56 | 0 | 777 | 876 | 357 | 456 | 1.45e-17 | 88.2 |
| Msa0530940 | AT5G06560.1 | 39.344 | 122 | 67 | 4 | 752 | 873 | 53 | 167 | 1.35e-15 | 81.3 |
| Msa0530940 | AT5G06560.1 | 43.023 | 86 | 47 | 1 | 292 | 375 | 88 | 173 | 2.53e-13 | 74.3 |
| Msa0530940 | AT3G54740.3 | 27.796 | 313 | 175 | 11 | 281 | 558 | 77 | 373 | 1.04e-14 | 78.2 |
| Msa0530940 | AT3G54740.3 | 38.144 | 97 | 60 | 0 | 780 | 876 | 74 | 170 | 5.48e-14 | 75.9 |
| Msa0530940 | AT3G54740.6 | 27.796 | 313 | 175 | 11 | 281 | 558 | 77 | 373 | 1.04e-14 | 78.2 |
| Msa0530940 | AT3G54740.6 | 38.144 | 97 | 60 | 0 | 780 | 876 | 74 | 170 | 5.48e-14 | 75.9 |
| Msa0530940 | AT3G54740.2 | 27.796 | 313 | 175 | 11 | 281 | 558 | 77 | 373 | 1.04e-14 | 78.2 |
| Msa0530940 | AT3G54740.2 | 38.144 | 97 | 60 | 0 | 780 | 876 | 74 | 170 | 5.48e-14 | 75.9 |
| Msa0530940 | AT3G54740.5 | 27.796 | 313 | 175 | 11 | 281 | 558 | 77 | 373 | 1.04e-14 | 78.2 |
| Msa0530940 | AT3G54740.5 | 38.144 | 97 | 60 | 0 | 780 | 876 | 74 | 170 | 5.48e-14 | 75.9 |
| Msa0530940 | AT1G08800.2 | 50.000 | 82 | 41 | 0 | 290 | 371 | 905 | 986 | 1.51e-14 | 79.0 |
| Msa0530940 | AT1G08800.2 | 44.681 | 94 | 52 | 0 | 780 | 873 | 893 | 986 | 2.76e-14 | 78.2 |
| Msa0530940 | AT1G08800.4 | 50.000 | 82 | 41 | 0 | 290 | 371 | 905 | 986 | 1.51e-14 | 79.0 |
| Msa0530940 | AT1G08800.4 | 44.681 | 94 | 52 | 0 | 780 | 873 | 893 | 986 | 2.76e-14 | 78.2 |
| Msa0530940 | AT1G08800.3 | 50.000 | 82 | 41 | 0 | 290 | 371 | 905 | 986 | 1.51e-14 | 79.0 |
| Msa0530940 | AT1G08800.3 | 44.681 | 94 | 52 | 0 | 780 | 873 | 893 | 986 | 2.76e-14 | 78.2 |
| Msa0530940 | AT1G08800.1 | 50.000 | 82 | 41 | 0 | 290 | 371 | 905 | 986 | 1.51e-14 | 79.0 |
| Msa0530940 | AT1G08800.1 | 44.681 | 94 | 52 | 0 | 780 | 873 | 893 | 986 | 2.76e-14 | 78.2 |
| Msa0530940 | AT3G54740.8 | 27.796 | 313 | 175 | 11 | 281 | 558 | 29 | 325 | 1.64e-14 | 77.0 |
| Msa0530940 | AT3G54740.8 | 38.144 | 97 | 60 | 0 | 780 | 876 | 26 | 122 | 7.20e-14 | 75.1 |
| Msa0530940 | AT3G54740.1 | 27.796 | 313 | 175 | 11 | 281 | 558 | 29 | 325 | 1.64e-14 | 77.0 |
| Msa0530940 | AT3G54740.1 | 38.144 | 97 | 60 | 0 | 780 | 876 | 26 | 122 | 7.20e-14 | 75.1 |
| Msa0530940 | AT3G54740.7 | 27.796 | 313 | 175 | 11 | 281 | 558 | 29 | 325 | 1.64e-14 | 77.0 |
| Msa0530940 | AT3G54740.7 | 38.144 | 97 | 60 | 0 | 780 | 876 | 26 | 122 | 7.20e-14 | 75.1 |
| Msa0530940 | AT3G54740.4 | 27.796 | 313 | 175 | 11 | 281 | 558 | 29 | 325 | 1.64e-14 | 77.0 |
| Msa0530940 | AT3G54740.4 | 38.144 | 97 | 60 | 0 | 780 | 876 | 26 | 122 | 7.20e-14 | 75.1 |
| Msa0530940 | AT1G74830.1 | 51.852 | 81 | 39 | 0 | 292 | 372 | 319 | 399 | 2.32e-14 | 77.4 |
| Msa0530940 | AT1G74830.1 | 33.333 | 180 | 107 | 4 | 705 | 873 | 221 | 398 | 9.08e-14 | 75.9 |
| Msa0530940 | AT2G30690.1 | 42.268 | 97 | 56 | 0 | 777 | 873 | 613 | 709 | 1.75e-13 | 75.1 |
| Msa0530940 | AT2G30690.1 | 41.000 | 100 | 59 | 0 | 272 | 371 | 610 | 709 | 6.43e-13 | 73.6 |
| Msa0530940 | AT2G30690.2 | 42.268 | 97 | 56 | 0 | 777 | 873 | 613 | 709 | 1.75e-13 | 75.1 |
| Msa0530940 | AT2G30690.2 | 41.000 | 100 | 59 | 0 | 272 | 371 | 610 | 709 | 6.43e-13 | 73.6 |
Find 184 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGTTCTTCTTCTTCTTTC+TGG | 0.126969 | 4_1:-5036831 | Msa0530940:five_prime_UTR |
| TATTGTTTGAGTTGCCTTTA+AGG | 0.172262 | 4_1:-5036212 | Msa0530940:CDS |
| TGTCTTCATTTCCAACAATT+TGG | 0.180729 | 4_1:+5030559 | None:intergenic |
| ATGGAACATATCTTCCTTAA+AGG | 0.186656 | 4_1:+5036198 | None:intergenic |
| AAAACATGTGTTAATAATAA+TGG | 0.212556 | 4_1:-5031530 | Msa0530940:CDS |
| TTGAGCTCTTTATAGGAAAA+TGG | 0.229794 | 4_1:-5036433 | Msa0530940:exon |
| AAAAGGTCAGTTGAAGCTTT+TGG | 0.244331 | 4_1:-5034150 | Msa0530940:CDS |
| CTCTTCATGTTCTGTAATAT+TGG | 0.248564 | 4_1:+5034487 | None:intergenic |
| TGACCAAACTTTCCATGATT+TGG | 0.259287 | 4_1:-5030700 | Msa0530940:CDS |
| CGTCCAAATCATGGAAAGTT+TGG | 0.264104 | 4_1:+5030697 | None:intergenic |
| AAGAGAGGTAGCTATGATTA+TGG | 0.275243 | 4_1:-5031374 | Msa0530940:CDS |
| GGTGAAGAAGGGTCATTCTT+TGG | 0.287313 | 4_1:-5031585 | Msa0530940:CDS |
| GGTTTCCGTTTGATCTTGTT+TGG | 0.289425 | 4_1:-5031607 | Msa0530940:CDS |
| GAAATTCATTCATGGAGTTT+AGG | 0.291053 | 4_1:-5036402 | Msa0530940:CDS |
| TACAGAAAATTAAACAATTA+AGG | 0.291171 | 4_1:-5034109 | Msa0530940:CDS |
| GGTTTCCGTTTGATTTAGTT+TGG | 0.294396 | 4_1:-5036155 | Msa0530940:CDS |
| ATCGGACTCGGTATCATAAA+AGG | 0.295101 | 4_1:+5030089 | None:intergenic |
| TAATAATGGGATTGTTGAAT+TGG | 0.299545 | 4_1:-5031516 | Msa0530940:CDS |
| TGGAGTTTAGGAGAAATTAT+TGG | 0.302605 | 4_1:-5036390 | Msa0530940:CDS |
| GACAATGAGATTGAAGTTCT+TGG | 0.303705 | 4_1:-5034242 | Msa0530940:CDS |
| GAGTTATGATTATGGCAAAA+TGG | 0.319168 | 4_1:-5035908 | Msa0530940:CDS |
| AAAATATGTGATGATAATAA+TGG | 0.322691 | 4_1:-5036072 | Msa0530940:CDS |
| AAAAGGAACTTGAAAGTTAT+AGG | 0.326732 | 4_1:-5030263 | Msa0530940:CDS |
| AAAAGGAACTTGAAAGTTAT+AGG | 0.326732 | 4_1:-5034661 | Msa0530940:CDS |
| ATCAGACTCAGTATCATAAA+AGG | 0.329427 | 4_1:+5034412 | None:intergenic |
| TCACCGGACTTGTCATGATT+TGG | 0.346763 | 4_1:-5035071 | Msa0530940:CDS |
| TAATAATGGGATTGTTGAAT+TGG | 0.347814 | 4_1:-5036058 | Msa0530940:CDS |
| CAAGAAAATGTTGAGATTGT+TGG | 0.350461 | 4_1:-5034968 | Msa0530940:CDS |
| CAAAAGGGTTGTTAATGTTA+AGG | 0.364940 | 4_1:-5036097 | Msa0530940:CDS |
| ACAATACATAAGCTATAAAA+AGG | 0.365579 | 4_1:+5036355 | None:intergenic |
| AAAGACAATGTCCAAATTGT+TGG | 0.370870 | 4_1:-5030570 | Msa0530940:CDS |
| CAGAGCATAAATCCTTCTTC+AGG | 0.372230 | 4_1:-5031242 | Msa0530940:CDS |
| AAACATGTGTTAATAATAAT+GGG | 0.372683 | 4_1:-5031529 | Msa0530940:CDS |
| CAGAGCATAAATCCTGCTTC+AGG | 0.377459 | 4_1:-5035787 | Msa0530940:CDS |
| TAACATGCTTTGAAGGGAAA+AGG | 0.382152 | 4_1:+5036788 | None:intergenic |
| ATCAACACTGTTGTCATATT+CGG | 0.387812 | 4_1:+5034343 | None:intergenic |
| GAAGATGAGAGTTCGTGTTC+AGG | 0.396843 | 4_1:-5036036 | Msa0530940:CDS |
| GAGAAAGGAGAAAATGAAAA+AGG | 0.398696 | 4_1:-5034167 | Msa0530940:CDS |
| GAAGATGAGAATTCGTGTTC+AGG | 0.401095 | 4_1:-5031494 | Msa0530940:CDS |
| TGAAACGTAGGTCTGGAATT+CGG | 0.403190 | 4_1:-5031403 | Msa0530940:CDS |
| TGCAAGAGATTCTTATAAGA+AGG | 0.403540 | 4_1:-5030308 | Msa0530940:CDS |
| CATCTATTCATTGTTGATTG+AGG | 0.404667 | 4_1:-5036565 | Msa0530940:five_prime_UTR |
| GGAGAAAGCGTCAATGGAAA+TGG | 0.405001 | 4_1:-5034795 | Msa0530940:CDS |
| CAGGAACTCGGCGGAGGAAG+AGG | 0.406814 | 4_1:-5035933 | Msa0530940:CDS |
| GTCTACTAACGAAAGCAAAC+GGG | 0.409752 | 4_1:+5036011 | None:intergenic |
| GAATATGACAACAGTGTTGA+TGG | 0.416403 | 4_1:-5034341 | Msa0530940:CDS |
| TAGATAGTACCAATGACAAA+AGG | 0.416441 | 4_1:-5036113 | Msa0530940:CDS |
| CTAACTTCTTTCCCTGAAGA+AGG | 0.420738 | 4_1:+5031230 | None:intergenic |
| CTTCGCCGCCATTACTTGAA+TGG | 0.421770 | 4_1:+5031631 | None:intergenic |
| CTTCGCCGCCATTACTTGAA+TGG | 0.421770 | 4_1:+5036179 | None:intergenic |
| TGATTATGGCAAAATGGATT+CGG | 0.425155 | 4_1:-5035902 | Msa0530940:CDS |
| AAATATGTGATGATAATAAT+GGG | 0.426757 | 4_1:-5036071 | Msa0530940:CDS |
| TTATAGGAAAATGGCTATAG+AGG | 0.430293 | 4_1:-5036424 | Msa0530940:exon |
| GTTTCCGTTTGATCTTGTTT+GGG | 0.431021 | 4_1:-5031606 | Msa0530940:CDS |
| ATTAAATTCATAACTGTGAC+AGG | 0.437254 | 4_1:+5035039 | None:intergenic |
| GATTCTTATAAGAAGGGAAA+AGG | 0.439083 | 4_1:-5030301 | Msa0530940:CDS |
| GTTTCCGTTTGATTTAGTTT+GGG | 0.442712 | 4_1:-5036154 | Msa0530940:CDS |
| TGATCTTGTTTGGGTGAAGA+AGG | 0.443291 | 4_1:-5031597 | Msa0530940:CDS |
| AACTTAGTAACATGCTTTGA+AGG | 0.448484 | 4_1:+5036781 | None:intergenic |
| AGTTCTTGCTTGCCTTGTGA+TGG | 0.451185 | 4_1:-5031296 | Msa0530940:CDS |
| GATTCTTATAAGAAGAGAAA+AGG | 0.451574 | 4_1:-5034699 | Msa0530940:CDS |
| AGTGTATTGAATAGAACAAA+AGG | 0.452894 | 4_1:+5036689 | None:intergenic |
| GTTTGCTTTCGTTAGTAGAC+AGG | 0.453265 | 4_1:-5036008 | Msa0530940:CDS |
| ATAGCTTATGTATTGTTATG+TGG | 0.454237 | 4_1:-5036348 | Msa0530940:CDS |
| TGCTGCTCTTTATCTAGAGC+TGG | 0.455714 | 4_1:-5034885 | Msa0530940:CDS |
| AGGAATATATTCACCCACTT+TGG | 0.457538 | 4_1:-5030619 | Msa0530940:CDS |
| AACATGCTTTGAAGGGAAAA+GGG | 0.466093 | 4_1:+5036789 | None:intergenic |
| CATGTTTAGTTCATAATGAA+AGG | 0.467246 | 4_1:-5034274 | Msa0530940:CDS |
| TTTCCTCCACCTCTTCTCCA+TGG | 0.467342 | 4_1:+5030154 | None:intergenic |
| TTCACCCAAACTAAATCAAA+CGG | 0.468000 | 4_1:+5036150 | None:intergenic |
| ATGAGTTTGAAACGTAGGTC+TGG | 0.472981 | 4_1:-5031410 | Msa0530940:CDS |
| AGTCCTTGCTTGCCTTGTGA+TGG | 0.476868 | 4_1:-5035841 | Msa0530940:CDS |
| CGGAGGTGCGGCTTAGTGAA+TGG | 0.477317 | 4_1:-5034595 | Msa0530940:CDS |
| TTGAGTTTGAAACGTAGATC+AGG | 0.479710 | 4_1:-5035952 | Msa0530940:CDS |
| AATTAAACAATTAAGGAATC+CGG | 0.481682 | 4_1:-5034102 | Msa0530940:CDS |
| CTAACTTCTTTCCCTGAAGC+AGG | 0.482888 | 4_1:+5035775 | None:intergenic |
| TATTCGGTCTTGCTTGCGCA+TGG | 0.488985 | 4_1:+5034359 | None:intergenic |
| CGTCCAAATCATGACAAGTC+CGG | 0.490565 | 4_1:+5035068 | None:intergenic |
| AGATTGAAGTTCTTGGAGAA+AGG | 0.491126 | 4_1:-5034235 | Msa0530940:CDS |
| TTCACCCAAACAAGATCAAA+CGG | 0.494139 | 4_1:+5031602 | None:intergenic |
| TGTCTACTAACGAAAGCAAA+CGG | 0.494222 | 4_1:+5036010 | None:intergenic |
| CTCGAATATATTCCTTGTCC+TGG | 0.496219 | 4_1:+5034998 | None:intergenic |
| TAGTTCATAATGAAAGGGTA+AGG | 0.498172 | 4_1:-5034268 | Msa0530940:CDS |
| GGCAACGATGCGCCACGTGC+CGG | 0.498829 | 4_1:+5034083 | None:intergenic |
| GCAAGAGGAGAAAGCGTCAA+TGG | 0.499562 | 4_1:-5030403 | Msa0530940:CDS |
| GCAAGAGGAGAAAGCGTCAA+TGG | 0.499562 | 4_1:-5034801 | Msa0530940:CDS |
| AGGAACTCGGCGGAGGAAGA+GGG | 0.508780 | 4_1:-5035932 | Msa0530940:CDS |
| GACTGAATGCAACATCAGAC+TGG | 0.508899 | 4_1:+5035860 | None:intergenic |
| CTATAGAGGAAATTCATTCA+TGG | 0.509121 | 4_1:-5036410 | Msa0530940:CDS |
| TTCTCCTTTCTCTGAAAACA+TGG | 0.510460 | 4_1:+5034178 | None:intergenic |
| ACAAAGATTTAGATCAAAGT+AGG | 0.510880 | 4_1:+5036718 | None:intergenic |
| AGAAGGATTTATGCTCTGAC+TGG | 0.513014 | 4_1:+5031247 | None:intergenic |
| GCAAGAGATTCTTATAAGAA+GGG | 0.513797 | 4_1:-5030307 | Msa0530940:CDS |
| GATTTATGAGTTTGAAACGT+AGG | 0.514519 | 4_1:-5031415 | Msa0530940:CDS |
| AGATAGTACCAATGACAAAA+GGG | 0.518688 | 4_1:-5036112 | Msa0530940:CDS |
| GTCAGAATGAAAAGTATCAC+AGG | 0.522115 | 4_1:+5031331 | None:intergenic |
| TCATATGTTTCAAATGAAAG+TGG | 0.523317 | 4_1:+5034560 | None:intergenic |
| GGTGAATATATTCCTTGTCC+TGG | 0.526396 | 4_1:+5030627 | None:intergenic |
| GATACAATGCTAAGGGGAAG+AGG | 0.528588 | 4_1:-5035978 | Msa0530940:CDS |
| CTTCCATCACAAGGCAAGCA+AGG | 0.530174 | 4_1:+5035838 | None:intergenic |
| TCGTTAGTAGACATTGAAAG+TGG | 0.534212 | 4_1:-5031458 | Msa0530940:CDS |
| GAATCACTTTCAGAATCAAA+AGG | 0.539796 | 4_1:+5034299 | None:intergenic |
| GTAGATCAGGAACTCGGCGG+AGG | 0.542572 | 4_1:-5035939 | Msa0530940:CDS |
| TACTGCCGCTGACGAAGCCA+TGG | 0.544720 | 4_1:-5034840 | Msa0530940:CDS |
| AGACATCGGCATCAAGATGT+TGG | 0.547946 | 4_1:-5030541 | Msa0530940:CDS |
| ATGTTTAGTTCATAATGAAA+GGG | 0.549055 | 4_1:-5034273 | Msa0530940:CDS |
| TCTTGGAGAAAGGCTGAAGA+TGG | 0.549792 | 4_1:-5034225 | Msa0530940:CDS |
| GAACTCGGCGGAGGAAGAGG+GGG | 0.552875 | 4_1:-5035930 | Msa0530940:CDS |
| TGATTATGGAAAGAACGATT+CGG | 0.557380 | 4_1:-5031360 | Msa0530940:CDS |
| TATTACAGAACATGAAGAGC+TGG | 0.559779 | 4_1:-5034483 | Msa0530940:CDS |
| ACTTAGTAACATGCTTTGAA+GGG | 0.560158 | 4_1:+5036782 | None:intergenic |
| GGAAGTTATACCTTAGTCCA+TGG | 0.560912 | 4_1:+5034056 | None:intergenic |
| GATCTTGTTTGGGTGAAGAA+GGG | 0.561141 | 4_1:-5031596 | Msa0530940:CDS |
| GCATCAACGGTTGATAGTCC+AGG | 0.561291 | 4_1:-5030645 | Msa0530940:CDS |
| GCATCAACGGTTGAAAGTCC+AGG | 0.561291 | 4_1:-5035016 | Msa0530940:CDS |
| TTATGAATTTAATGCATCAA+CGG | 0.561998 | 4_1:-5030658 | Msa0530940:CDS |
| TTATGAATTTAATGCATCAA+CGG | 0.561998 | 4_1:-5035029 | Msa0530940:CDS |
| CTCTTCTCCATGGTCTGCAT+CGG | 0.562622 | 4_1:+5030164 | None:intergenic |
| GGAACTCGGCGGAGGAAGAG+GGG | 0.563669 | 4_1:-5035931 | Msa0530940:CDS |
| AAAATCCCCTTGCAAGGACA+AGG | 0.565728 | 4_1:+5036270 | None:intergenic |
| TATGATATTGCGTCTGCAAG+AGG | 0.570890 | 4_1:-5030418 | Msa0530940:CDS |
| CTATTGTTGCTTCCATCACA+AGG | 0.571645 | 4_1:+5031284 | None:intergenic |
| GATATGTTCCATTCAAGTAA+TGG | 0.573825 | 4_1:-5036187 | Msa0530940:CDS |
| TACTGCTGCTGATGACGCCA+TGG | 0.575916 | 4_1:-5030442 | Msa0530940:CDS |
| AGAGCATAAATCCTGCTTCA+GGG | 0.576648 | 4_1:-5035786 | Msa0530940:CDS |
| GACATCAAGAACATCGGACT+CGG | 0.577107 | 4_1:+5030077 | None:intergenic |
| AGAGCATAAATCCTTCTTCA+GGG | 0.578663 | 4_1:-5031241 | Msa0530940:CDS |
| GTAGGTCTGGAATTCGGCGG+AGG | 0.578868 | 4_1:-5031397 | Msa0530940:CDS |
| TGCAGACCATGGAGAAGAGG+TGG | 0.579195 | 4_1:-5030160 | Msa0530940:CDS |
| TGAAAGTGGATGTGATGCTA+AGG | 0.581314 | 4_1:-5031444 | Msa0530940:CDS |
| GGACAGCGGATACAATGCTA+AGG | 0.583667 | 4_1:-5035986 | Msa0530940:CDS |
| CATAGCCATGGCTTCGTCAG+CGG | 0.583914 | 4_1:+5034835 | None:intergenic |
| ACAGTGCTTTCTGTCTGCGA+TGG | 0.584520 | 4_1:+5034533 | None:intergenic |
| TTGTTGGTGTTAGTCTTGTG+AGG | 0.585397 | 4_1:+5029690 | Msa0530930:three_prime_UTR |
| AGACCATGGAGAAGAGGTGG+AGG | 0.585573 | 4_1:-5030157 | Msa0530940:CDS |
| GGTATGTTCCATTCAAGTAA+TGG | 0.587305 | 4_1:-5031639 | Msa0530940:CDS |
| TTCAAGTAATGGCGGCGAAG+AGG | 0.592155 | 4_1:-5031628 | Msa0530940:CDS |
| TTCAAGTAATGGCGGCGAAG+AGG | 0.592155 | 4_1:-5036176 | Msa0530940:CDS |
| GATTGTGCCGATGCAGACCA+TGG | 0.593173 | 4_1:-5030171 | Msa0530940:CDS |
| CGATGCAGACCATGGAGAAG+AGG | 0.593958 | 4_1:-5030163 | Msa0530940:CDS |
| TATGATATCGCGTCTGCAAG+AGG | 0.594932 | 4_1:-5034816 | Msa0530940:CDS |
| CAATTAAGGAATCCGGCACG+TGG | 0.597614 | 4_1:-5034095 | Msa0530940:CDS |
| GGAATTCGGCGGAGGAAGAG+AGG | 0.598401 | 4_1:-5031389 | Msa0530940:CDS |
| TACCCTAAAATCCCCTTGCA+AGG | 0.599822 | 4_1:+5036264 | None:intergenic |
| GACAGCGGATACAATGCTAA+GGG | 0.601905 | 4_1:-5035985 | Msa0530940:CDS |
| TTTGCTTTCGTTAGTAGACA+GGG | 0.605452 | 4_1:-5036007 | Msa0530940:CDS |
| ATTCAAAGTCAGCGGAGGTG+CGG | 0.612724 | 4_1:-5034607 | Msa0530940:CDS |
| GTTATACCTTAGTCCATGGA+GGG | 0.613165 | 4_1:+5034060 | None:intergenic |
| ATGTCGTGTAATTCCAAAGT+GGG | 0.614139 | 4_1:+5030606 | None:intergenic |
| ATTTAGACGATGAAGATCAC+CGG | 0.618034 | 4_1:-5035087 | Msa0530940:intron |
| GATGTCCATGTTATTGATGA+CGG | 0.620528 | 4_1:-5034383 | Msa0530940:CDS |
| CAGACGCAATATCATAGCCA+TGG | 0.621906 | 4_1:+5030425 | None:intergenic |
| ATACTGCTGCTTCCATCACA+AGG | 0.622820 | 4_1:+5035829 | None:intergenic |
| CAGACGCGATATCATAGCCA+TGG | 0.625045 | 4_1:+5034823 | None:intergenic |
| TCTTTATCTAGAGTTAGAGA+AGG | 0.629205 | 4_1:-5030481 | Msa0530940:CDS |
| CATGTTTCAAATGAAAGTGA+CGG | 0.631336 | 4_1:+5030240 | None:intergenic |
| AACATGGACATCAAGAACAT+CGG | 0.631426 | 4_1:+5030071 | None:intergenic |
| TGAGTTGCATTCAAAGTCAG+CGG | 0.632124 | 4_1:-5034615 | Msa0530940:CDS |
| TATACCTTAGTCCATGGAGG+GGG | 0.636018 | 4_1:+5034062 | None:intergenic |
| TCTACTAACGAAAGCAAACG+CGG | 0.639127 | 4_1:+5031470 | None:intergenic |
| ATACAATGCTAAGGGGAAGA+GGG | 0.643616 | 4_1:-5035977 | Msa0530940:CDS |
| ATTGTTGGAAATGAAGACAT+CGG | 0.649945 | 4_1:-5030555 | Msa0530940:CDS |
| ACGGTTGAAAGTCCAGGACA+AGG | 0.655015 | 4_1:-5035010 | Msa0530940:CDS |
| TGGAAATGAGACAGTACGAG+AGG | 0.656144 | 4_1:-5034775 | Msa0530940:CDS |
| CATGTCGTGTAATTCCAAAG+TGG | 0.656768 | 4_1:+5030605 | None:intergenic |
| GAAAGTGGATGTGATGCTAA+GGG | 0.658705 | 4_1:-5031443 | Msa0530940:CDS |
| TTATACCTTAGTCCATGGAG+GGG | 0.660669 | 4_1:+5034061 | None:intergenic |
| AGTTATACCTTAGTCCATGG+AGG | 0.660730 | 4_1:+5034059 | None:intergenic |
| TCTTTATCTAGAGCTGGAGA+AGG | 0.665408 | 4_1:-5034879 | Msa0530940:CDS |
| TGAAACGTAGATCAGGAACT+CGG | 0.665696 | 4_1:-5035945 | Msa0530940:CDS |
| TCTACTAACGAAAGCAAACG+GGG | 0.669896 | 4_1:+5036012 | None:intergenic |
| ATGTTCCATTCAAGTAATGG+CGG | 0.669995 | 4_1:-5036184 | Msa0530940:CDS |
| GGCTTAGTGAATGGAAACGA+AGG | 0.670882 | 4_1:-5034586 | Msa0530940:CDS |
| GGAGGAAAATAGTCAACACA+AGG | 0.673038 | 4_1:-5030139 | Msa0530940:CDS |
| ATGGACCGTCATCAATAACA+TGG | 0.673173 | 4_1:+5034378 | None:intergenic |
| TAGAAATGAGACAATACGAG+AGG | 0.675395 | 4_1:-5030377 | Msa0530940:CDS |
| ATGTTCCATTCAAGTAATGG+CGG | 0.676719 | 4_1:-5031636 | Msa0530940:CDS |
| TCAGAATGAAAAGTATCACA+GGG | 0.691095 | 4_1:+5031332 | None:intergenic |
| TCGTTAGTAGACAGGGACAG+CGG | 0.699020 | 4_1:-5036000 | Msa0530940:CDS |
| ACGGTTGATAGTCCAGGACA+AGG | 0.703307 | 4_1:-5030639 | Msa0530940:CDS |
| GTTGCATTCAAAGTCAGCGG+AGG | 0.704335 | 4_1:-5034612 | Msa0530940:CDS |
| ACAGCGGATACAATGCTAAG+GGG | 0.717650 | 4_1:-5035984 | Msa0530940:CDS |
| AACGTAGGTCTGGAATTCGG+CGG | 0.724941 | 4_1:-5031400 | Msa0530940:CDS |
| AACGTAGATCAGGAACTCGG+CGG | 0.765032 | 4_1:-5035942 | Msa0530940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATTTCAATTTCTATT+TGG | - | chr4_1:5032866-5032885 | Msa0530940:intron | 10.0% |
| !! | AAAATATGTGATGATAATAA+TGG | - | chr4_1:5030540-5030559 | Msa0530940:CDS | 15.0% |
| !! | AAATATGTGATGATAATAAT+GGG | - | chr4_1:5030541-5030560 | Msa0530940:CDS | 15.0% |
| !!! | TTTTGTTATTTTATGAATAC+CGG | - | chr4_1:5031455-5031474 | Msa0530940:CDS | 15.0% |
| !! | TACAGAAAATTAAACAATTA+AGG | - | chr4_1:5032503-5032522 | Msa0530940:intron | 15.0% |
| !! | AATACAAAAAAAGTAATACA+AGG | - | chr4_1:5033716-5033735 | Msa0530940:intron | 15.0% |
| !! | TATAACTATACAACTATAAA+TGG | + | chr4_1:5033786-5033805 | None:intergenic | 15.0% |
| !!! | TTTTTATTAGAAATGTAAAC+AGG | + | chr4_1:5033891-5033910 | None:intergenic | 15.0% |
| !!! | AAATTTAATTTCTTTATACC+TGG | + | chr4_1:5034308-5034327 | None:intergenic | 15.0% |
| !!! | ACAAATAAAGATGTTTTATT+TGG | + | chr4_1:5034639-5034658 | None:intergenic | 15.0% |
| !! | AAAACATGTGTTAATAATAA+TGG | - | chr4_1:5035082-5035101 | Msa0530940:CDS | 15.0% |
| !! | AAACATGTGTTAATAATAAT+GGG | - | chr4_1:5035083-5035102 | Msa0530940:CDS | 15.0% |
| !! | ACTCAATAAATTAATGTATT+TGG | + | chr4_1:5036870-5036889 | None:intergenic | 15.0% |
| !!! | AAAGTTTAGTTTTTTCTTGT+TGG | - | chr4_1:5029999-5030018 | Msa0530940:intron | 20.0% |
| !!! | AAGTTTAGTTTTTTCTTGTT+GGG | - | chr4_1:5030000-5030019 | Msa0530940:intron | 20.0% |
| !! | ACAATACATAAGCTATAAAA+AGG | + | chr4_1:5030260-5030279 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTCAAATTGTTT+AGG | - | chr4_1:5030301-5030320 | Msa0530940:CDS | 20.0% |
| !!! | TTCAAATTGTTTAGGTTTTT+TGG | - | chr4_1:5030309-5030328 | Msa0530940:CDS | 20.0% |
| !! | AATAACCAAGTTAAAACTAA+AGG | + | chr4_1:5031491-5031510 | None:intergenic | 20.0% |
| !! | TTATGAATTTAATGCATCAA+CGG | - | chr4_1:5031583-5031602 | Msa0530940:CDS | 20.0% |
| !!! | ATGTTTAGTTCATAATGAAA+GGG | - | chr4_1:5032339-5032358 | Msa0530940:intron | 20.0% |
| !!! | ATTGTTTAATTTTCTGTAGA+CGG | + | chr4_1:5032501-5032520 | None:intergenic | 20.0% |
| !! | AATTAAACAATTAAGGAATC+CGG | - | chr4_1:5032510-5032529 | Msa0530940:intron | 20.0% |
| !! | ATAATAAGCTGTATACAATT+TGG | - | chr4_1:5033693-5033712 | Msa0530940:intron | 20.0% |
| !!! | TGATAATGTAGTCATATTTT+TGG | - | chr4_1:5033831-5033850 | Msa0530940:intron | 20.0% |
| !!! | GTTAAGTTTTATTGCTAAAT+AGG | + | chr4_1:5034204-5034223 | None:intergenic | 20.0% |
| !!! | TTTTGAAAAAGAAATATGTG+TGG | - | chr4_1:5034543-5034562 | Msa0530940:CDS | 20.0% |
| !!! | AAAATTCATTTTTGGAGTTT+AGG | - | chr4_1:5034758-5034777 | Msa0530940:CDS | 20.0% |
| !! | TTCATGAGATATTATTTGAA+TGG | - | chr4_1:5034939-5034958 | Msa0530940:CDS | 20.0% |
| !!! | ATTAACAATCATTTTGTCAT+TGG | + | chr4_1:5035059-5035078 | None:intergenic | 20.0% |
| !! | TTATGAATTTAATGCATCAA+CGG | - | chr4_1:5031583-5031602 | Msa0530940:CDS | 20.0% |
| !! | GTATAGTTTAAATATCTTTG+AGG | + | chr4_1:5036774-5036793 | None:intergenic | 20.0% |
| !!! | TAGTTAATAAGTTTGTTTGT+TGG | + | chr4_1:5036826-5036845 | None:intergenic | 20.0% |
| ! | ACAAAGATTTAGATCAAAGT+AGG | + | chr4_1:5029897-5029916 | None:intergenic | 25.0% |
| ! | AGTGTATTGAATAGAACAAA+AGG | + | chr4_1:5029926-5029945 | None:intergenic | 25.0% |
| ! | AGCTATAAAAAGGTCAATAT+AGG | + | chr4_1:5030250-5030269 | None:intergenic | 25.0% |
| ! | ATAGCTTATGTATTGTTATG+TGG | - | chr4_1:5030264-5030283 | Msa0530940:CDS | 25.0% |
| !! | TAATAATGGGATTGTTGAAT+TGG | - | chr4_1:5030554-5030573 | Msa0530940:CDS | 25.0% |
| ! | TGAAAGAATGATAACTAAGT+GGG | + | chr4_1:5030886-5030905 | None:intergenic | 25.0% |
| ! | TTGAAAGAATGATAACTAAG+TGG | + | chr4_1:5030887-5030906 | None:intergenic | 25.0% |
| ! | ATTGATACGATGAACAAAAA+AGG | + | chr4_1:5030925-5030944 | None:intergenic | 25.0% |
| ! | AAAATCTAGGAATCATTTAC+CGG | + | chr4_1:5031049-5031068 | None:intergenic | 25.0% |
| !! | AAATGATTCCTAGATTTTGA+AGG | - | chr4_1:5031051-5031070 | Msa0530940:intron | 25.0% |
| !! | AATGATTCCTAGATTTTGAA+GGG | - | chr4_1:5031052-5031071 | Msa0530940:intron | 25.0% |
| ! | ATACACTATTTAGTCCAAAA+TGG | - | chr4_1:5031160-5031179 | Msa0530940:intron | 25.0% |
| !! | TGTAATATTTGACACCATTT+TGG | + | chr4_1:5031177-5031196 | None:intergenic | 25.0% |
| !!! | ATAGCGGTTTGTTTAAATTT+TGG | + | chr4_1:5031220-5031239 | None:intergenic | 25.0% |
| ! | GAGAAGGAAAAAATTGAATT+TGG | - | chr4_1:5031277-5031296 | Msa0530940:CDS | 25.0% |
| !! | TCAATTTGCACTAAAGTTTT+AGG | + | chr4_1:5031395-5031414 | None:intergenic | 25.0% |
| ! | ATTAAATTCATAACTGTGAC+AGG | + | chr4_1:5031576-5031595 | None:intergenic | 25.0% |
| ! | GATTCTTATAAGAAGAGAAA+AGG | - | chr4_1:5031913-5031932 | Msa0530940:intron | 25.0% |
| ! | AAAAGGAACTTGAAAGTTAT+AGG | - | chr4_1:5031951-5031970 | Msa0530940:intron | 25.0% |
| ! | TCATATGTTTCAAATGAAAG+TGG | + | chr4_1:5032055-5032074 | None:intergenic | 25.0% |
| !! | CATGTTTAGTTCATAATGAA+AGG | - | chr4_1:5032338-5032357 | Msa0530940:intron | 25.0% |
| ! | GTTCGAGATGAAAATTTAAA+TGG | + | chr4_1:5032598-5032617 | None:intergenic | 25.0% |
| ! | CAAACTGAATTTGTATTTGT+GGG | + | chr4_1:5032771-5032790 | None:intergenic | 25.0% |
| ! | ACAAACTGAATTTGTATTTG+TGG | + | chr4_1:5032772-5032791 | None:intergenic | 25.0% |
| !! | GTGGATTGTAATTATAATTG+AGG | - | chr4_1:5032807-5032826 | Msa0530940:intron | 25.0% |
| ! | TAAAAACTTGTGAGATTGTT+TGG | - | chr4_1:5033031-5033050 | Msa0530940:intron | 25.0% |
| ! | ACTTATCAAGTAAGTGTTTA+TGG | + | chr4_1:5033110-5033129 | None:intergenic | 25.0% |
| !!! | GAGTTTTTTTAATTGTCATG+AGG | - | chr4_1:5033305-5033324 | Msa0530940:intron | 25.0% |
| ! | ATACAATATACTTGTGAGTT+AGG | + | chr4_1:5033556-5033575 | None:intergenic | 25.0% |
| ! | ACAGCTTATTATGAATGAAA+TGG | + | chr4_1:5033685-5033704 | None:intergenic | 25.0% |
| !! | ACAATAGAGAACTCTATTTT+TGG | - | chr4_1:5033946-5033965 | Msa0530940:intron | 25.0% |
| !!! | CAATAGAGAACTCTATTTTT+GGG | - | chr4_1:5033947-5033966 | Msa0530940:intron | 25.0% |
| !! | TGTAAATTTTTATGACGTGT+TGG | + | chr4_1:5034063-5034082 | None:intergenic | 25.0% |
| !! | GTGAGCTTTTTATTGAAAAA+TGG | - | chr4_1:5034727-5034746 | Msa0530940:CDS | 25.0% |
| !! | TTTTTATTGAAAAATGGCCT+TGG | - | chr4_1:5034733-5034752 | Msa0530940:CDS | 25.0% |
| !! | TAATAATGGGATTGTTGAAT+TGG | - | chr4_1:5030554-5030573 | Msa0530940:CDS | 25.0% |
| ! | ATCTTCATCGTCTAAATAAT+TGG | + | chr4_1:5031522-5031541 | None:intergenic | 25.0% |
| ! | AAAAGGAACTTGAAAGTTAT+AGG | - | chr4_1:5031951-5031970 | Msa0530940:intron | 25.0% |
| ! | ACTTAGTAACATGCTTTGAA+GGG | + | chr4_1:5029833-5029852 | Msa0530930:three_prime_UTR | 30.0% |
| AACTTAGTAACATGCTTTGA+AGG | + | chr4_1:5029834-5029853 | Msa0530930:three_prime_UTR | 30.0% | |
| ! | CATCTATTCATTGTTGATTG+AGG | - | chr4_1:5030047-5030066 | Msa0530940:intron | 30.0% |
| ! | AAAGTTCAGTTTTTGCTTGT+TGG | - | chr4_1:5030088-5030107 | Msa0530940:CDS | 30.0% |
| ! | AAGTTCAGTTTTTGCTTGTT+GGG | - | chr4_1:5030089-5030108 | Msa0530940:CDS | 30.0% |
| ! | TGAGATTTTGAGCTCTTTAT+AGG | - | chr4_1:5030172-5030191 | Msa0530940:CDS | 30.0% |
| TTGAGCTCTTTATAGGAAAA+TGG | - | chr4_1:5030179-5030198 | Msa0530940:CDS | 30.0% | |
| TTATAGGAAAATGGCTATAG+AGG | - | chr4_1:5030188-5030207 | Msa0530940:CDS | 30.0% | |
| CTATAGAGGAAATTCATTCA+TGG | - | chr4_1:5030202-5030221 | Msa0530940:CDS | 30.0% | |
| GAAATTCATTCATGGAGTTT+AGG | - | chr4_1:5030210-5030229 | Msa0530940:CDS | 30.0% | |
| TGGAGTTTAGGAGAAATTAT+TGG | - | chr4_1:5030222-5030241 | Msa0530940:CDS | 30.0% | |
| !! | TATTGTTTGAGTTGCCTTTA+AGG | - | chr4_1:5030400-5030419 | Msa0530940:CDS | 30.0% |
| ATGGAACATATCTTCCTTAA+AGG | + | chr4_1:5030417-5030436 | None:intergenic | 30.0% | |
| GATATGTTCCATTCAAGTAA+TGG | - | chr4_1:5030425-5030444 | Msa0530940:CDS | 30.0% | |
| ! | GTTTCCGTTTGATTTAGTTT+GGG | - | chr4_1:5030458-5030477 | Msa0530940:CDS | 30.0% |
| TTCACCCAAACTAAATCAAA+CGG | + | chr4_1:5030465-5030484 | None:intergenic | 30.0% | |
| TAGATAGTACCAATGACAAA+AGG | - | chr4_1:5030499-5030518 | Msa0530940:CDS | 30.0% | |
| AGATAGTACCAATGACAAAA+GGG | - | chr4_1:5030500-5030519 | Msa0530940:CDS | 30.0% | |
| ! | ATTAACAACCCTTTTGTCAT+TGG | + | chr4_1:5030511-5030530 | None:intergenic | 30.0% |
| CAAAAGGGTTGTTAATGTTA+AGG | - | chr4_1:5030515-5030534 | Msa0530940:CDS | 30.0% | |
| GAGTTATGATTATGGCAAAA+TGG | - | chr4_1:5030704-5030723 | Msa0530940:CDS | 30.0% | |
| ! | TGATTATGGCAAAATGGATT+CGG | - | chr4_1:5030710-5030729 | Msa0530940:CDS | 30.0% |
| TCAACAAGTTGTGATTATAC+CGG | - | chr4_1:5031027-5031046 | Msa0530940:intron | 30.0% | |
| !! | ATGATTCCTAGATTTTGAAG+GGG | - | chr4_1:5031053-5031072 | Msa0530940:intron | 30.0% |
| TCGCATTTCACATAAAATAG+CGG | + | chr4_1:5031236-5031255 | None:intergenic | 30.0% | |
| AACTAAAGGCAGATAATATC+CGG | + | chr4_1:5031477-5031496 | None:intergenic | 30.0% | |
| !!! | ATCTGCCTTTAGTTTTAACT+TGG | - | chr4_1:5031483-5031502 | Msa0530940:CDS | 30.0% |
| CAAGAAAATGTTGAGATTGT+TGG | - | chr4_1:5031644-5031663 | Msa0530940:CDS | 30.0% | |
| ! | AGAAAAGGAGAATCTCTTTT+TGG | - | chr4_1:5031928-5031947 | Msa0530940:intron | 30.0% |
| CTCTTCATGTTCTGTAATAT+TGG | + | chr4_1:5032128-5032147 | None:intergenic | 30.0% | |
| ATCAGACTCAGTATCATAAA+AGG | + | chr4_1:5032203-5032222 | None:intergenic | 30.0% | |
| ATCAACACTGTTGTCATATT+CGG | + | chr4_1:5032272-5032291 | None:intergenic | 30.0% | |
| GAATCACTTTCAGAATCAAA+AGG | + | chr4_1:5032316-5032335 | None:intergenic | 30.0% | |
| TAGTTCATAATGAAAGGGTA+AGG | - | chr4_1:5032344-5032363 | Msa0530940:intron | 30.0% | |
| GAGAAAGGAGAAAATGAAAA+AGG | - | chr4_1:5032445-5032464 | Msa0530940:intron | 30.0% | |
| AATGGAGATAGAAAACAAGT+TGG | + | chr4_1:5032580-5032599 | None:intergenic | 30.0% | |
| TCGAACATGTTTGTTTATAC+AGG | - | chr4_1:5032612-5032631 | Msa0530940:intron | 30.0% | |
| TGTTTATACAGGCATGTATA+TGG | - | chr4_1:5032623-5032642 | Msa0530940:intron | 30.0% | |
| TTGTGTACAAAATCAGATAG+TGG | - | chr4_1:5032788-5032807 | Msa0530940:intron | 30.0% | |
| CAGACAGAATTATAAGAAAG+AGG | + | chr4_1:5032939-5032958 | None:intergenic | 30.0% | |
| TATAAGCTGAAAACAGCTTA+TGG | + | chr4_1:5033086-5033105 | None:intergenic | 30.0% | |
| TTGAGATGTTTACCCAAATA+AGG | - | chr4_1:5033151-5033170 | Msa0530940:intron | 30.0% | |
| CAAGCAATATAGCAGAAATT+AGG | + | chr4_1:5033177-5033196 | None:intergenic | 30.0% | |
| TTGTTCTCAAACATACAACA+AGG | + | chr4_1:5033429-5033448 | None:intergenic | 30.0% | |
| ! | TTCCATGCTTTTCAACAAAA+AGG | + | chr4_1:5033511-5033530 | None:intergenic | 30.0% |
| !! | TTTTTGTTGAAAAGCATGGA+AGG | - | chr4_1:5033510-5033529 | Msa0530940:intron | 30.0% |
| AATATACTTGTGAGTTAGGT+GGG | + | chr4_1:5033552-5033571 | None:intergenic | 30.0% | |
| !!! | TCTATTTTTGGGTACTTAAG+TGG | - | chr4_1:5033958-5033977 | Msa0530940:intron | 30.0% |
| TACACACCTCTTCAAAAAAT+CGG | + | chr4_1:5034003-5034022 | None:intergenic | 30.0% | |
| ! | AATTTTTATGACGTGTTGGA+GGG | + | chr4_1:5034059-5034078 | None:intergenic | 30.0% |
| ! | AAATTTTTATGACGTGTTGG+AGG | + | chr4_1:5034060-5034079 | None:intergenic | 30.0% |
| AAATGATACTGATAGAGAAG+AGG | + | chr4_1:5034159-5034178 | None:intergenic | 30.0% | |
| ! | AGTTCAATTTACCCATGTTT+TGG | - | chr4_1:5034360-5034379 | Msa0530940:CDS | 30.0% |
| ! | CCAAAAATGAATTTTCTCCA+AGG | + | chr4_1:5034753-5034772 | None:intergenic | 30.0% |
| ! | CCTTGGAGAAAATTCATTTT+TGG | - | chr4_1:5034750-5034769 | Msa0530940:CDS | 30.0% |
| !!! | ATTCATTTTTGGAGTTTAGG+AGG | - | chr4_1:5034761-5034780 | Msa0530940:CDS | 30.0% |
| GCAATATATAAGCTAGGAAA+AGG | + | chr4_1:5034808-5034827 | None:intergenic | 30.0% | |
| ! | ATTTGAATGGCCTTTAAAGA+AGG | - | chr4_1:5034952-5034971 | Msa0530940:CDS | 30.0% |
| ATGGAACATACCTTCTTTAA+AGG | + | chr4_1:5034965-5034984 | None:intergenic | 30.0% | |
| ! | GATTTATGAGTTTGAAACGT+AGG | - | chr4_1:5035197-5035216 | Msa0530940:intron | 30.0% |
| TGATTATGGAAAGAACGATT+CGG | - | chr4_1:5035252-5035271 | Msa0530940:intron | 30.0% | |
| !! | TCAGAATGAAAAGTATCACA+GGG | + | chr4_1:5035283-5035302 | None:intergenic | 30.0% |
| AATGTAAATCGTTTGCAACA+CGG | + | chr4_1:5035566-5035585 | None:intergenic | 30.0% | |
| TCGAAACAAGTTGTAAAACA+TGG | + | chr4_1:5035648-5035667 | None:intergenic | 30.0% | |
| !! | TGTTTTACAACTTGTTTCGA+AGG | - | chr4_1:5035648-5035667 | Msa0530940:intron | 30.0% |
| TTACTCAACTACAGAACTAT+GGG | + | chr4_1:5035722-5035741 | None:intergenic | 30.0% | |
| ATTACTCAACTACAGAACTA+TGG | + | chr4_1:5035723-5035742 | None:intergenic | 30.0% | |
| TTTGTTACTGTTATGCATAC+TGG | - | chr4_1:5035828-5035847 | Msa0530940:CDS | 30.0% | |
| AAAGACAATGTCCAAATTGT+TGG | - | chr4_1:5036042-5036061 | Msa0530940:CDS | 30.0% | |
| TGTCTTCATTTCCAACAATT+TGG | + | chr4_1:5036056-5036075 | None:intergenic | 30.0% | |
| ATTGTTGGAAATGAAGACAT+CGG | - | chr4_1:5036057-5036076 | Msa0530940:CDS | 30.0% | |
| ! | TCTTTATCTAGAGTTAGAGA+AGG | - | chr4_1:5036131-5036150 | Msa0530940:CDS | 30.0% |
| TGCAAGAGATTCTTATAAGA+AGG | - | chr4_1:5031906-5031925 | Msa0530940:intron | 30.0% | |
| GCAAGAGATTCTTATAAGAA+GGG | - | chr4_1:5031907-5031926 | Msa0530940:intron | 30.0% | |
| GATTCTTATAAGAAGGGAAA+AGG | - | chr4_1:5036311-5036330 | Msa0530940:CDS | 30.0% | |
| CATGTTTCAAATGAAAGTGA+CGG | + | chr4_1:5036375-5036394 | None:intergenic | 30.0% | |
| CAATGTTGTCATCAATAACA+TGG | + | chr4_1:5036560-5036579 | None:intergenic | 30.0% | |
| TTCATAAGTATTTGTGAGAC+TGG | - | chr4_1:5036681-5036700 | Msa0530940:five_prime_UTR | 30.0% | |
| ATATGCGAAACTCTTGTATT+TGG | + | chr4_1:5036898-5036917 | None:intergenic | 30.0% | |
| ACTGTTCTTCTTCTTCTTTC+TGG | - | chr4_1:5029781-5029800 | Msa0530940:intron | 35.0% | |
| !! | AACATGCTTTGAAGGGAAAA+GGG | + | chr4_1:5029826-5029845 | Msa0530930:three_prime_UTR | 35.0% |
| !! | TAACATGCTTTGAAGGGAAA+AGG | + | chr4_1:5029827-5029846 | Msa0530930:three_prime_UTR | 35.0% |
| ATGTTCCATTCAAGTAATGG+CGG | - | chr4_1:5030428-5030447 | Msa0530940:CDS | 35.0% | |
| ! | GGTTTCCGTTTGATTTAGTT+TGG | - | chr4_1:5030457-5030476 | Msa0530940:CDS | 35.0% |
| TGTCTACTAACGAAAGCAAA+CGG | + | chr4_1:5030605-5030624 | None:intergenic | 35.0% | |
| TTTGCTTTCGTTAGTAGACA+GGG | - | chr4_1:5030605-5030624 | Msa0530940:CDS | 35.0% | |
| ! | TTGAGTTTGAAACGTAGATC+AGG | - | chr4_1:5030660-5030679 | Msa0530940:CDS | 35.0% |
| AGAGCAGCATTGTTAAATAG+TGG | - | chr4_1:5031099-5031118 | Msa0530940:intron | 35.0% | |
| GTTAAATAGTGGTGCAATAG+CGG | - | chr4_1:5031110-5031129 | Msa0530940:intron | 35.0% | |
| ! | TTTTCCTTCTCACTCTCTAT+CGG | + | chr4_1:5031268-5031287 | None:intergenic | 35.0% |
| ATTTAGACGATGAAGATCAC+CGG | - | chr4_1:5031525-5031544 | Msa0530940:CDS | 35.0% | |
| !! | GGAGAATCTCTTTTTGGAAA+AGG | - | chr4_1:5031934-5031953 | Msa0530940:intron | 35.0% |
| TATTACAGAACATGAAGAGC+TGG | - | chr4_1:5032129-5032148 | Msa0530940:intron | 35.0% | |
| GGACAAAAATGCTGAATACA+AGG | - | chr4_1:5032150-5032169 | Msa0530940:intron | 35.0% | |
| GATGTCCATGTTATTGATGA+CGG | - | chr4_1:5032229-5032248 | Msa0530940:intron | 35.0% | |
| ! | GAATATGACAACAGTGTTGA+TGG | - | chr4_1:5032271-5032290 | Msa0530940:intron | 35.0% |
| GACAATGAGATTGAAGTTCT+TGG | - | chr4_1:5032370-5032389 | Msa0530940:intron | 35.0% | |
| AGATTGAAGTTCTTGGAGAA+AGG | - | chr4_1:5032377-5032396 | Msa0530940:intron | 35.0% | |
| ! | ATGACCATGTTTTCAGAGAA+AGG | - | chr4_1:5032430-5032449 | Msa0530940:intron | 35.0% |
| ! | TTCTCCTTTCTCTGAAAACA+TGG | + | chr4_1:5032437-5032456 | None:intergenic | 35.0% |
| ! | AAAAGGTCAGTTGAAGCTTT+TGG | - | chr4_1:5032462-5032481 | Msa0530940:intron | 35.0% |
| TATCAGCGGTCTATTTGTAT+TGG | - | chr4_1:5032984-5033003 | Msa0530940:intron | 35.0% | |
| !! | GCAGAAATTAGGCCTTATTT+GGG | + | chr4_1:5033166-5033185 | None:intergenic | 35.0% |
| !! | AGCAGAAATTAGGCCTTATT+TGG | + | chr4_1:5033167-5033186 | None:intergenic | 35.0% |
| !!! | AAATGCCCAATTTTTTTCCC+AGG | - | chr4_1:5033215-5033234 | Msa0530940:intron | 35.0% |
| CCTTACCTGGGAAAAAAATT+GGG | + | chr4_1:5033223-5033242 | None:intergenic | 35.0% | |
| !!! | CCAATTTTTTTCCCAGGTAA+GGG | - | chr4_1:5033221-5033240 | Msa0530940:intron | 35.0% |
| TCAAACATACAACAAGGCTA+AGG | + | chr4_1:5033423-5033442 | None:intergenic | 35.0% | |
| ! | TGCCTTTTTGTTGAAAAGCA+TGG | - | chr4_1:5033506-5033525 | Msa0530940:intron | 35.0% |
| ! | TTGAAAAGCATGGAAGGAAT+GGG | - | chr4_1:5033516-5033535 | Msa0530940:intron | 35.0% |
| ATATACTTGTGAGTTAGGTG+GGG | + | chr4_1:5033551-5033570 | None:intergenic | 35.0% | |
| CAATATACTTGTGAGTTAGG+TGG | + | chr4_1:5033553-5033572 | None:intergenic | 35.0% | |
| ATAGATGCTCTAGCTAGTTA+AGG | - | chr4_1:5033749-5033768 | Msa0530940:intron | 35.0% | |
| AACATCTCTTGGTCTACAAT+GGG | + | chr4_1:5033917-5033936 | None:intergenic | 35.0% | |
| TAACATCTCTTGGTCTACAA+TGG | + | chr4_1:5033918-5033937 | None:intergenic | 35.0% | |
| GTTGATGCTTTAACATCTCT+TGG | + | chr4_1:5033928-5033947 | None:intergenic | 35.0% | |
| !!! | ACATCACCGATTTTTTGAAG+AGG | - | chr4_1:5033994-5034013 | Msa0530940:intron | 35.0% |
| ! | GCTTTATTAAACTCTCTTCG+CGG | + | chr4_1:5034135-5034154 | None:intergenic | 35.0% |
| CTAAATAGGTAACTTCGTTC+GGG | + | chr4_1:5034190-5034209 | None:intergenic | 35.0% | |
| GCTAAATAGGTAACTTCGTT+CGG | + | chr4_1:5034191-5034210 | None:intergenic | 35.0% | |
| AAACTCTAATGGAGACATCT+TGG | - | chr4_1:5034277-5034296 | Msa0530940:CDS | 35.0% | |
| ! | GACACTAGTGTACTATGTTT+TGG | + | chr4_1:5034396-5034415 | None:intergenic | 35.0% |
| ATAGTACACTAGTGTCTATC+TGG | - | chr4_1:5034400-5034419 | Msa0530940:CDS | 35.0% | |
| AGCTAGGAAAAGGTCAATAA+AGG | + | chr4_1:5034798-5034817 | None:intergenic | 35.0% | |
| CACACAGCAATATATAAGCT+AGG | + | chr4_1:5034814-5034833 | None:intergenic | 35.0% | |
| TCTTTGCTTCCAAACTGTTT+AGG | - | chr4_1:5034849-5034868 | Msa0530940:CDS | 35.0% | |
| CTTTGCTTCCAAACTGTTTA+GGG | - | chr4_1:5034850-5034869 | Msa0530940:CDS | 35.0% | |
| !! | TCCAAACTGTTTAGGGTTTT+TGG | - | chr4_1:5034857-5034876 | Msa0530940:CDS | 35.0% |
| TCCAAAAACCCTAAACAGTT+TGG | + | chr4_1:5034861-5034880 | None:intergenic | 35.0% | |
| TAACCAAAAATCCCTTTGCA+AGG | + | chr4_1:5034899-5034918 | None:intergenic | 35.0% | |
| GGTATGTTCCATTCAAGTAA+TGG | - | chr4_1:5034973-5034992 | Msa0530940:CDS | 35.0% | |
| ATGTTCCATTCAAGTAATGG+CGG | - | chr4_1:5030428-5030447 | Msa0530940:CDS | 35.0% | |
| ! | GTTTCCGTTTGATCTTGTTT+GGG | - | chr4_1:5035006-5035025 | Msa0530940:CDS | 35.0% |
| TTCACCCAAACAAGATCAAA+CGG | + | chr4_1:5035013-5035032 | None:intergenic | 35.0% | |
| TCGTTAGTAGACATTGAAAG+TGG | - | chr4_1:5035154-5035173 | Msa0530940:intron | 35.0% | |
| AAGAGAGGTAGCTATGATTA+TGG | - | chr4_1:5035238-5035257 | Msa0530940:intron | 35.0% | |
| !! | GTCAGAATGAAAAGTATCAC+AGG | + | chr4_1:5035284-5035303 | None:intergenic | 35.0% |
| ! | TGATACTTTTCATTCTGACG+TGG | - | chr4_1:5035285-5035304 | Msa0530940:intron | 35.0% |
| AGAGCATAAATCCTTCTTCA+GGG | - | chr4_1:5035371-5035390 | Msa0530940:intron | 35.0% | |
| CATGATGAACACTATGAACT+AGG | + | chr4_1:5035477-5035496 | None:intergenic | 35.0% | |
| ATGTAAATCGTTTGCAACAC+GGG | + | chr4_1:5035565-5035584 | None:intergenic | 35.0% | |
| TACTCAACTACAGAACTATG+GGG | + | chr4_1:5035721-5035740 | None:intergenic | 35.0% | |
| TGACCAAACTTTCCATGATT+TGG | - | chr4_1:5035912-5035931 | Msa0530940:CDS | 35.0% | |
| !!! | AGCTTTTTTCGTCCAAATCA+TGG | + | chr4_1:5035927-5035946 | None:intergenic | 35.0% |
| AGGAATATATTCACCCACTT+TGG | - | chr4_1:5035993-5036012 | Msa0530940:CDS | 35.0% | |
| ATGTCGTGTAATTCCAAAGT+GGG | + | chr4_1:5036009-5036028 | None:intergenic | 35.0% | |
| TAGAAATGAGACAATACGAG+AGG | - | chr4_1:5036235-5036254 | Msa0530940:CDS | 35.0% | |
| ! | GGAAAAGGAGATTCTCTTTT+TGG | - | chr4_1:5036326-5036345 | Msa0530940:CDS | 35.0% |
| !! | GGAGATTCTCTTTTTGGAAA+AGG | - | chr4_1:5036332-5036351 | Msa0530940:CDS | 35.0% |
| AACATGGACATCAAGAACAT+CGG | + | chr4_1:5032221-5032240 | None:intergenic | 35.0% | |
| CAAACACGAAGAATCACATT+CGG | + | chr4_1:5036635-5036654 | None:intergenic | 35.0% | |
| TCTACTAACGAAAGCAAACG+GGG | + | chr4_1:5030603-5030622 | None:intergenic | 40.0% | |
| GTCTACTAACGAAAGCAAAC+GGG | + | chr4_1:5030604-5030623 | None:intergenic | 40.0% | |
| GTTTGCTTTCGTTAGTAGAC+AGG | - | chr4_1:5030604-5030623 | Msa0530940:CDS | 40.0% | |
| ATACAATGCTAAGGGGAAGA+GGG | - | chr4_1:5030635-5030654 | Msa0530940:CDS | 40.0% | |
| TGAAACGTAGATCAGGAACT+CGG | - | chr4_1:5030667-5030686 | Msa0530940:CDS | 40.0% | |
| AAGAGGGGGAGTTATGATTA+TGG | - | chr4_1:5030696-5030715 | Msa0530940:CDS | 40.0% | |
| AGAGCATAAATCCTGCTTCA+GGG | - | chr4_1:5030826-5030845 | Msa0530940:intron | 40.0% | |
| TTGTGACCCCTTCAAAATCT+AGG | + | chr4_1:5031062-5031081 | None:intergenic | 40.0% | |
| CTCGAATATATTCCTTGTCC+TGG | + | chr4_1:5031617-5031636 | None:intergenic | 40.0% | |
| ! | TCTTTATCTAGAGCTGGAGA+AGG | - | chr4_1:5031733-5031752 | Msa0530940:intron | 40.0% |
| TGAGTTGCATTCAAAGTCAG+CGG | - | chr4_1:5031997-5032016 | Msa0530940:intron | 40.0% | |
| ATGGACCGTCATCAATAACA+TGG | + | chr4_1:5032237-5032256 | None:intergenic | 40.0% | |
| TTATACCTTAGTCCATGGAG+GGG | + | chr4_1:5032554-5032573 | None:intergenic | 40.0% | |
| GTTATACCTTAGTCCATGGA+GGG | + | chr4_1:5032555-5032574 | None:intergenic | 40.0% | |
| AGTTATACCTTAGTCCATGG+AGG | + | chr4_1:5032556-5032575 | None:intergenic | 40.0% | |
| GGAAGTTATACCTTAGTCCA+TGG | + | chr4_1:5032559-5032578 | None:intergenic | 40.0% | |
| AGTGAGCACAATACTATCAG+CGG | - | chr4_1:5032970-5032989 | Msa0530940:intron | 40.0% | |
| ! | TGGGCATTTAAGATTAGCGA+TGG | + | chr4_1:5033204-5033223 | None:intergenic | 40.0% |
| !!! | CCCAATTTTTTTCCCAGGTA+AGG | - | chr4_1:5033220-5033239 | Msa0530940:intron | 40.0% |
| CCCTTACCTGGGAAAAAAAT+TGG | + | chr4_1:5033224-5033243 | None:intergenic | 40.0% | |
| ATGCTTGGCTATGAAGACAA+AGG | + | chr4_1:5033337-5033356 | None:intergenic | 40.0% | |
| ATGGCATTTACAAGTTGCCA+AGG | + | chr4_1:5033360-5033379 | None:intergenic | 40.0% | |
| TTGGCAACTTGTAAATGCCA+TGG | - | chr4_1:5033359-5033378 | Msa0530940:intron | 40.0% | |
| ! | TGAATTCTAGAGGCTACAAG+AGG | + | chr4_1:5033391-5033410 | None:intergenic | 40.0% |
| GAAGGAGTGATGAATTCTAG+AGG | + | chr4_1:5033401-5033420 | None:intergenic | 40.0% | |
| ACATACAACAAGGCTAAGGA+AGG | + | chr4_1:5033419-5033438 | None:intergenic | 40.0% | |
| ! | GTTGAAAAGCATGGAAGGAA+TGG | - | chr4_1:5033515-5033534 | Msa0530940:intron | 40.0% |
| GAAATGTAAACAGGTAGACG+AGG | + | chr4_1:5033882-5033901 | None:intergenic | 40.0% | |
| TTATTAAACTCTCTTCGCGG+CGG | + | chr4_1:5034132-5034151 | None:intergenic | 40.0% | |
| ! | CTTTGGCTAAGAGCATATGT+TGG | + | chr4_1:5034230-5034249 | None:intergenic | 40.0% |
| GATGTCTCCATTAGAGTTTG+AGG | + | chr4_1:5034276-5034295 | None:intergenic | 40.0% | |
| GTCAGCATACTCCAAAACAT+GGG | + | chr4_1:5034374-5034393 | None:intergenic | 40.0% | |
| TAAAGATGCTGTGATGCACA+TGG | + | chr4_1:5034603-5034622 | None:intergenic | 40.0% | |
| TGGAGTTTAGGAGGAATTGT+TGG | - | chr4_1:5034770-5034789 | Msa0530940:CDS | 40.0% | |
| ATTTGCCTTGTCCTTGCAAA+GGG | - | chr4_1:5034885-5034904 | Msa0530940:CDS | 40.0% | |
| AAAATCCCTTTGCAAGGACA+AGG | + | chr4_1:5034893-5034912 | None:intergenic | 40.0% | |
| ! | TGTCCTTGCAAAGGGATTTT+TGG | - | chr4_1:5034893-5034912 | Msa0530940:CDS | 40.0% |
| !!! | GCAAAGGGATTTTTGGTTAC+AGG | - | chr4_1:5034900-5034919 | Msa0530940:CDS | 40.0% |
| GGTTTCCGTTTGATCTTGTT+TGG | - | chr4_1:5035005-5035024 | Msa0530940:CDS | 40.0% | |
| ! | TGATCTTGTTTGGGTGAAGA+AGG | - | chr4_1:5035015-5035034 | Msa0530940:CDS | 40.0% |
| ! | GATCTTGTTTGGGTGAAGAA+GGG | - | chr4_1:5035016-5035035 | Msa0530940:CDS | 40.0% |
| GAAGATGAGAATTCGTGTTC+AGG | - | chr4_1:5035118-5035137 | Msa0530940:intron | 40.0% | |
| TCTACTAACGAAAGCAAACG+CGG | + | chr4_1:5030603-5030622 | None:intergenic | 40.0% | |
| TGAAAGTGGATGTGATGCTA+AGG | - | chr4_1:5035168-5035187 | Msa0530940:intron | 40.0% | |
| GAAAGTGGATGTGATGCTAA+GGG | - | chr4_1:5035169-5035188 | Msa0530940:intron | 40.0% | |
| ! | ATGAGTTTGAAACGTAGGTC+TGG | - | chr4_1:5035202-5035221 | Msa0530940:intron | 40.0% |
| ! | TGAAACGTAGGTCTGGAATT+CGG | - | chr4_1:5035209-5035228 | Msa0530940:intron | 40.0% |
| ! | CTATTGTTGCTTCCATCACA+AGG | + | chr4_1:5035331-5035350 | None:intergenic | 40.0% |
| AGAAGGATTTATGCTCTGAC+TGG | + | chr4_1:5035368-5035387 | None:intergenic | 40.0% | |
| CAGAGCATAAATCCTTCTTC+AGG | - | chr4_1:5035370-5035389 | Msa0530940:intron | 40.0% | |
| CTAACTTCTTTCCCTGAAGA+AGG | + | chr4_1:5035385-5035404 | None:intergenic | 40.0% | |
| ACTCAACTACAGAACTATGG+GGG | + | chr4_1:5035720-5035739 | None:intergenic | 40.0% | |
| CGTCCAAATCATGGAAAGTT+TGG | + | chr4_1:5035918-5035937 | None:intergenic | 40.0% | |
| GGTGAATATATTCCTTGTCC+TGG | + | chr4_1:5035988-5036007 | None:intergenic | 40.0% | |
| CATGTCGTGTAATTCCAAAG+TGG | + | chr4_1:5036010-5036029 | None:intergenic | 40.0% | |
| TATGATATTGCGTCTGCAAG+AGG | - | chr4_1:5036194-5036213 | Msa0530940:CDS | 40.0% | |
| GGAGGAAAATAGTCAACACA+AGG | - | chr4_1:5036473-5036492 | Msa0530940:five_prime_UTR | 40.0% | |
| ! | ATCGGACTCGGTATCATAAA+AGG | + | chr4_1:5036526-5036545 | None:intergenic | 40.0% |
| !!! | TTGCATTTTGAGTTTGCACC+TGG | + | chr4_1:5036597-5036616 | None:intergenic | 40.0% |
| ! | TGTTTTGCCTTGTCCTTGCA+AGG | - | chr4_1:5030335-5030354 | Msa0530940:CDS | 45.0% |
| ! | GTTTTGCCTTGTCCTTGCAA+GGG | - | chr4_1:5030336-5030355 | Msa0530940:CDS | 45.0% |
| ! | TTTTGCCTTGTCCTTGCAAG+GGG | - | chr4_1:5030337-5030356 | Msa0530940:CDS | 45.0% |
| AAAATCCCCTTGCAAGGACA+AGG | + | chr4_1:5030345-5030364 | None:intergenic | 45.0% | |
| ! | TGTCCTTGCAAGGGGATTTT+AGG | - | chr4_1:5030345-5030364 | Msa0530940:CDS | 45.0% |
| ! | GTCCTTGCAAGGGGATTTTA+GGG | - | chr4_1:5030346-5030365 | Msa0530940:CDS | 45.0% |
| TACCCTAAAATCCCCTTGCA+AGG | + | chr4_1:5030351-5030370 | None:intergenic | 45.0% | |
| !!! | GCAAGGGGATTTTAGGGTAT+AGG | - | chr4_1:5030352-5030371 | Msa0530940:CDS | 45.0% |
| GAAGATGAGAGTTCGTGTTC+AGG | - | chr4_1:5030576-5030595 | Msa0530940:CDS | 45.0% | |
| GACAGCGGATACAATGCTAA+GGG | - | chr4_1:5030627-5030646 | Msa0530940:CDS | 45.0% | |
| ACAGCGGATACAATGCTAAG+GGG | - | chr4_1:5030628-5030647 | Msa0530940:CDS | 45.0% | |
| GATACAATGCTAAGGGGAAG+AGG | - | chr4_1:5030634-5030653 | Msa0530940:CDS | 45.0% | |
| GACTGAATGCAACATCAGAC+TGG | + | chr4_1:5030755-5030774 | None:intergenic | 45.0% | |
| ! | ATACTGCTGCTTCCATCACA+AGG | + | chr4_1:5030786-5030805 | None:intergenic | 45.0% |
| CAGAGCATAAATCCTGCTTC+AGG | - | chr4_1:5030825-5030844 | Msa0530940:intron | 45.0% | |
| CTAACTTCTTTCCCTGAAGC+AGG | + | chr4_1:5030840-5030859 | None:intergenic | 45.0% | |
| AACACCGATAGAGAGTGAGA+AGG | - | chr4_1:5031261-5031280 | Msa0530940:CDS | 45.0% | |
| TCACCGGACTTGTCATGATT+TGG | - | chr4_1:5031541-5031560 | Msa0530940:CDS | 45.0% | |
| CGTCCAAATCATGACAAGTC+CGG | + | chr4_1:5031547-5031566 | None:intergenic | 45.0% | |
| ! | TGCTGCTCTTTATCTAGAGC+TGG | - | chr4_1:5031727-5031746 | Msa0530940:intron | 45.0% |
| TATGATATCGCGTCTGCAAG+AGG | - | chr4_1:5031796-5031815 | Msa0530940:intron | 45.0% | |
| !! | GGAGAAAGCGTCAATGGAAA+TGG | - | chr4_1:5031817-5031836 | Msa0530940:intron | 45.0% |
| TGGAAATGAGACAGTACGAG+AGG | - | chr4_1:5031837-5031856 | Msa0530940:intron | 45.0% | |
| GGCTTAGTGAATGGAAACGA+AGG | - | chr4_1:5032026-5032045 | Msa0530940:intron | 45.0% | |
| TCTTGGAGAAAGGCTGAAGA+TGG | - | chr4_1:5032387-5032406 | Msa0530940:intron | 45.0% | |
| TATACCTTAGTCCATGGAGG+GGG | + | chr4_1:5032553-5032572 | None:intergenic | 45.0% | |
| GAAAGCTCTACTGTCAAGAC+AGG | + | chr4_1:5032838-5032857 | None:intergenic | 45.0% | |
| !!! | TTTTTTCCCAGGTAAGGGAG+AGG | - | chr4_1:5033226-5033245 | Msa0530940:intron | 45.0% |
| ! | TCTTTTCCTCTCCCTTACCT+GGG | + | chr4_1:5033235-5033254 | None:intergenic | 45.0% |
| TTGTCTCCCAAGACACACTT+TGG | + | chr4_1:5033263-5033282 | None:intergenic | 45.0% | |
| TCTTCATAGCCAAGCATCCT+TGG | - | chr4_1:5033340-5033359 | Msa0530940:intron | 45.0% | |
| TACAAGTTGCCAAGGATGCT+TGG | + | chr4_1:5033352-5033371 | None:intergenic | 45.0% | |
| !! | GCTACAAGAGGTATTTGCCA+TGG | + | chr4_1:5033379-5033398 | None:intergenic | 45.0% |
| CTCCAAGCCTCAAACTCTAA+TGG | - | chr4_1:5034266-5034285 | Msa0530940:CDS | 45.0% | |
| ! | CTCCATTAGAGTTTGAGGCT+TGG | + | chr4_1:5034271-5034290 | None:intergenic | 45.0% |
| GGTCAGCATACTCCAAAACA+TGG | + | chr4_1:5034375-5034394 | None:intergenic | 45.0% | |
| ACTAGTGTCTATCTGGTCAG+AGG | - | chr4_1:5034407-5034426 | Msa0530940:CDS | 45.0% | |
| CTAGTGTCTATCTGGTCAGA+GGG | - | chr4_1:5034408-5034427 | Msa0530940:CDS | 45.0% | |
| CATTTGCCTTGTCCTTGCAA+AGG | - | chr4_1:5034884-5034903 | Msa0530940:CDS | 45.0% | |
| GGTGAAGAAGGGTCATTCTT+TGG | - | chr4_1:5035027-5035046 | Msa0530940:CDS | 45.0% | |
| AGTTCTTGCTTGCCTTGTGA+TGG | - | chr4_1:5035316-5035335 | Msa0530940:intron | 45.0% | |
| CTCAACTACAGAACTATGGG+GGG | + | chr4_1:5035719-5035738 | None:intergenic | 45.0% | |
| AGACATCGGCATCAAGATGT+TGG | - | chr4_1:5036071-5036090 | Msa0530940:CDS | 45.0% | |
| CAGACGCAATATCATAGCCA+TGG | + | chr4_1:5036190-5036209 | None:intergenic | 45.0% | |
| GACATCAAGAACATCGGACT+CGG | + | chr4_1:5036538-5036557 | None:intergenic | 45.0% | |
| ATTGAACTCGCAAGTTGTCC+AGG | - | chr4_1:5036576-5036595 | Msa0530940:five_prime_UTR | 45.0% | |
| CTTCGCCGCCATTACTTGAA+TGG | + | chr4_1:5030436-5030455 | None:intergenic | 50.0% | |
| TTCAAGTAATGGCGGCGAAG+AGG | - | chr4_1:5030436-5030455 | Msa0530940:CDS | 50.0% | |
| TCGTTAGTAGACAGGGACAG+CGG | - | chr4_1:5030612-5030631 | Msa0530940:CDS | 50.0% | |
| GGACAGCGGATACAATGCTA+AGG | - | chr4_1:5030626-5030645 | Msa0530940:CDS | 50.0% | |
| AACGTAGATCAGGAACTCGG+CGG | - | chr4_1:5030670-5030689 | Msa0530940:CDS | 50.0% | |
| AGTCCTTGCTTGCCTTGTGA+TGG | - | chr4_1:5030771-5030790 | Msa0530940:intron | 50.0% | |
| CTTCCATCACAAGGCAAGCA+AGG | + | chr4_1:5030777-5030796 | None:intergenic | 50.0% | |
| GCATCAACGGTTGAAAGTCC+AGG | - | chr4_1:5031596-5031615 | Msa0530940:CDS | 50.0% | |
| ACGGTTGAAAGTCCAGGACA+AGG | - | chr4_1:5031602-5031621 | Msa0530940:CDS | 50.0% | |
| CAGACGCGATATCATAGCCA+TGG | + | chr4_1:5031792-5031811 | None:intergenic | 50.0% | |
| !! | GCAAGAGGAGAAAGCGTCAA+TGG | - | chr4_1:5031811-5031830 | Msa0530940:intron | 50.0% |
| GTTGCATTCAAAGTCAGCGG+AGG | - | chr4_1:5032000-5032019 | Msa0530940:intron | 50.0% | |
| ATTCAAAGTCAGCGGAGGTG+CGG | - | chr4_1:5032005-5032024 | Msa0530940:intron | 50.0% | |
| ACAGTGCTTTCTGTCTGCGA+TGG | + | chr4_1:5032082-5032101 | None:intergenic | 50.0% | |
| TATTCGGTCTTGCTTGCGCA+TGG | + | chr4_1:5032256-5032275 | None:intergenic | 50.0% | |
| CAATTAAGGAATCCGGCACG+TGG | - | chr4_1:5032517-5032536 | Msa0530940:intron | 50.0% | |
| ! | CTCTTTTCCTCTCCCTTACC+TGG | + | chr4_1:5033236-5033255 | None:intergenic | 50.0% |
| CAGGTAAGGGAGAGGAAAAG+AGG | - | chr4_1:5033234-5033253 | Msa0530940:intron | 50.0% | |
| AGGCTGCCAAAGTGTGTCTT+GGG | - | chr4_1:5033254-5033273 | Msa0530940:intron | 50.0% | |
| GCCAAAGCATAGCTCCAAAG+AGG | - | chr4_1:5034243-5034262 | Msa0530940:CDS | 50.0% | |
| !! | GCCTCTTTGGAGCTATGCTT+TGG | + | chr4_1:5034247-5034266 | None:intergenic | 50.0% |
| ! | TTTGAGGCTTGGAGCCTCTT+TGG | + | chr4_1:5034260-5034279 | None:intergenic | 50.0% |
| CTTCGCCGCCATTACTTGAA+TGG | + | chr4_1:5030436-5030455 | None:intergenic | 50.0% | |
| TTCAAGTAATGGCGGCGAAG+AGG | - | chr4_1:5030436-5030455 | Msa0530940:CDS | 50.0% | |
| ! | AACGTAGGTCTGGAATTCGG+CGG | - | chr4_1:5035212-5035231 | Msa0530940:intron | 50.0% |
| !! | GCATCAACGGTTGATAGTCC+AGG | - | chr4_1:5035967-5035986 | Msa0530940:CDS | 50.0% |
| !! | ACGGTTGATAGTCCAGGACA+AGG | - | chr4_1:5035973-5035992 | Msa0530940:CDS | 50.0% |
| !! | GCAAGAGGAGAAAGCGTCAA+TGG | - | chr4_1:5031811-5031830 | Msa0530940:intron | 50.0% |
| CTCTTCTCCATGGTCTGCAT+CGG | + | chr4_1:5036451-5036470 | None:intergenic | 50.0% | |
| TTTCCTCCACCTCTTCTCCA+TGG | + | chr4_1:5036461-5036480 | None:intergenic | 50.0% | |
| CATAGCCATGGCTTCGTCAG+CGG | + | chr4_1:5031780-5031799 | None:intergenic | 55.0% | |
| GAGGCTGCCAAAGTGTGTCT+TGG | - | chr4_1:5033253-5033272 | Msa0530940:intron | 55.0% | |
| GGAGACATCTTGGACTGACC+AGG | - | chr4_1:5034287-5034306 | Msa0530940:CDS | 55.0% | |
| GTGTCTATCTGGTCAGAGGG+AGG | - | chr4_1:5034411-5034430 | Msa0530940:CDS | 55.0% | |
| ! | TACTGCTGCTGATGACGCCA+TGG | - | chr4_1:5036170-5036189 | Msa0530940:CDS | 55.0% |
| ! | GATTGTGCCGATGCAGACCA+TGG | - | chr4_1:5036441-5036460 | Msa0530940:five_prime_UTR | 55.0% |
| CGATGCAGACCATGGAGAAG+AGG | - | chr4_1:5036449-5036468 | Msa0530940:five_prime_UTR | 55.0% | |
| TGCAGACCATGGAGAAGAGG+TGG | - | chr4_1:5036452-5036471 | Msa0530940:five_prime_UTR | 55.0% | |
| AGACCATGGAGAAGAGGTGG+AGG | - | chr4_1:5036455-5036474 | Msa0530940:five_prime_UTR | 55.0% | |
| GTAGATCAGGAACTCGGCGG+AGG | - | chr4_1:5030673-5030692 | Msa0530940:CDS | 60.0% | |
| AGGAACTCGGCGGAGGAAGA+GGG | - | chr4_1:5030680-5030699 | Msa0530940:CDS | 60.0% | |
| TACTGCCGCTGACGAAGCCA+TGG | - | chr4_1:5031772-5031791 | Msa0530940:intron | 60.0% | |
| ! | CGGAGGTGCGGCTTAGTGAA+TGG | - | chr4_1:5032017-5032036 | Msa0530940:intron | 60.0% |
| ! | GTTGCCCCCTCCATGGACTA+AGG | - | chr4_1:5032546-5032565 | Msa0530940:intron | 60.0% |
| ! | GTAGGTCTGGAATTCGGCGG+AGG | - | chr4_1:5035215-5035234 | Msa0530940:intron | 60.0% |
| GGAATTCGGCGGAGGAAGAG+AGG | - | chr4_1:5035223-5035242 | Msa0530940:intron | 60.0% | |
| CAGGAACTCGGCGGAGGAAG+AGG | - | chr4_1:5030679-5030698 | Msa0530940:CDS | 65.0% | |
| GGAACTCGGCGGAGGAAGAG+GGG | - | chr4_1:5030681-5030700 | Msa0530940:CDS | 65.0% | |
| GAACTCGGCGGAGGAAGAGG+GGG | - | chr4_1:5030682-5030701 | Msa0530940:CDS | 65.0% | |
| GGCAACGATGCGCCACGTGC+CGG | + | chr4_1:5032532-5032551 | None:intergenic | 70.0% | |
| GCGCATCGTTGCCCCCTCCA+TGG | - | chr4_1:5032539-5032558 | Msa0530940:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 5029699 | 5036935 | 5029699 | ID=Msa0530940;Name=Msa0530940 |
| chr4_1 | mRNA | 5029699 | 5036935 | 5029699 | ID=Msa0530940-mRNA-1;Parent=Msa0530940;Name=Msa0530940-mRNA-1;_AED=0.10;_eAED=0.10;_QI=499|0.25|0.4|0.8|1|1|5|0|945 |
| chr4_1 | exon | 5029699 | 5029728 | 5029699 | ID=Msa0530940-mRNA-1:exon:1544;Parent=Msa0530940-mRNA-1 |
| chr4_1 | exon | 5030074 | 5030732 | 5030074 | ID=Msa0530940-mRNA-1:exon:1543;Parent=Msa0530940-mRNA-1 |
| chr4_1 | exon | 5031222 | 5031663 | 5031222 | ID=Msa0530940-mRNA-1:exon:1542;Parent=Msa0530940-mRNA-1 |
| chr4_1 | exon | 5034067 | 5035103 | 5034067 | ID=Msa0530940-mRNA-1:exon:1541;Parent=Msa0530940-mRNA-1 |
| chr4_1 | exon | 5035767 | 5036935 | 5035767 | ID=Msa0530940-mRNA-1:exon:1540;Parent=Msa0530940-mRNA-1 |
| chr4_1 | five_prime_UTR | 5036437 | 5036935 | 5036437 | ID=Msa0530940-mRNA-1:five_prime_utr;Parent=Msa0530940-mRNA-1 |
| chr4_1 | CDS | 5035767 | 5036436 | 5035767 | ID=Msa0530940-mRNA-1:cds;Parent=Msa0530940-mRNA-1 |
| chr4_1 | CDS | 5034067 | 5035103 | 5034067 | ID=Msa0530940-mRNA-1:cds;Parent=Msa0530940-mRNA-1 |
| chr4_1 | CDS | 5031222 | 5031663 | 5031222 | ID=Msa0530940-mRNA-1:cds;Parent=Msa0530940-mRNA-1 |
| chr4_1 | CDS | 5030074 | 5030732 | 5030074 | ID=Msa0530940-mRNA-1:cds;Parent=Msa0530940-mRNA-1 |
| chr4_1 | CDS | 5029699 | 5029728 | 5029699 | ID=Msa0530940-mRNA-1:cds;Parent=Msa0530940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
