AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0121490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121490 MtrunA17_Chr1g0180541 94.737 551 29 0 1 551 1 551 0.0 1048
Msa0121490 MtrunA17_Chr1g0180551 77.061 558 118 3 1 551 70 624 0.0 852
Msa0121490 MtrunA17_Chr4g0028411 57.169 537 223 6 13 548 12 542 0.0 614
Msa0121490 MtrunA17_Chr2g0327341 54.291 536 237 6 13 548 12 539 0.0 586
Msa0121490 MtrunA17_Chr1g0157401 42.491 546 298 7 3 541 17 553 1.14e-146 433
Msa0121490 MtrunA17_Chr1g0197391 41.682 559 304 12 3 551 24 570 1.03e-132 398
Msa0121490 MtrunA17_Chr5g0409771 39.560 546 305 9 4 540 18 547 1.79e-130 392
Msa0121490 MtrunA17_Chr8g0353341 42.383 512 273 9 13 511 24 526 8.90e-130 389
Msa0121490 MtrunA17_Chr4g0039791 40.665 541 304 7 6 540 24 553 5.10e-128 385
Msa0121490 MtrunA17_Chr1g0186071 44.106 526 258 13 27 542 51 550 1.03e-125 380
Msa0121490 MtrunA17_Chr5g0409791 39.744 546 298 8 13 540 28 560 8.01e-125 377
Msa0121490 MtrunA17_Chr5g0395431 40.037 537 286 11 21 540 62 579 2.12e-120 367
Msa0121490 MtrunA17_Chr4g0072561 40.643 529 297 10 20 542 25 542 4.61e-119 362
Msa0121490 MtrunA17_Chr3g0116271 40.762 525 270 13 32 541 53 551 6.21e-119 362
Msa0121490 MtrunA17_Chr3g0116251 39.847 522 276 13 32 541 54 549 8.98e-117 357
Msa0121490 MtrunA17_Chr4g0000461 40.541 518 287 11 32 540 29 534 2.01e-114 350
Msa0121490 MtrunA17_Chr3g0102411 33.769 536 340 9 6 538 8 531 1.01e-102 320
Msa0121490 MtrunA17_Chr2g0334131 48.000 275 140 3 268 540 3 276 8.03e-78 246
Msa0121490 MtrunA17_Chr1g0157431 34.648 355 219 6 3 351 17 364 1.68e-59 206
Msa0121490 MtrunA17_Chr6g0471921 29.675 492 319 13 56 538 32 505 4.85e-49 177
Msa0121490 MtrunA17_Chr3g0109731 28.154 547 345 18 28 540 14 546 1.30e-47 174
Msa0121490 MtrunA17_Chr5g0396331 27.820 532 338 18 28 534 14 524 4.16e-41 155
Msa0121490 MtrunA17_Chr4g0028451 62.617 107 31 1 406 512 10 107 1.03e-39 140
Msa0121490 MtrunA17_Chr2g0301671 26.538 569 369 17 19 551 11 566 3.17e-39 150
Msa0121490 MtrunA17_Chr5g0396311 27.221 529 347 14 28 534 14 526 3.02e-37 145
Msa0121490 MtrunA17_Chr5g0433231 26.750 557 335 18 28 540 14 541 6.87e-37 144
Msa0121490 MtrunA17_Chr8g0370701 27.106 546 334 17 28 537 56 573 2.62e-36 143
Msa0121490 MtrunA17_Chr5g0433241 26.259 556 352 16 16 537 6 537 7.21e-36 141
Msa0121490 MtrunA17_Chr2g0292471 25.758 528 342 16 57 541 29 549 3.70e-35 139
Msa0121490 MtrunA17_Chr4g0068151 25.954 524 341 17 51 540 41 551 9.33e-35 138
Msa0121490 MtrunA17_Chr5g0433221 25.714 560 337 18 28 540 14 541 1.93e-32 131
Msa0121490 MtrunA17_Chr5g0406681 24.624 532 365 15 28 537 41 558 1.44e-31 129
Msa0121490 MtrunA17_Chr6g0471311 25.045 551 354 16 28 540 14 543 2.10e-30 125
Msa0121490 MtrunA17_Chr1g0205711 27.557 479 252 22 56 465 116 568 7.95e-30 124
Msa0121490 MtrunA17_Chr8g0370731 26.582 395 242 14 166 537 115 484 4.78e-28 117
Msa0121490 MtrunA17_Chr8g0388081 25.691 362 202 15 158 466 132 479 2.37e-26 113
Msa0121490 MtrunA17_Chr7g0270221 29.248 359 197 14 191 502 182 530 3.91e-25 109
Msa0121490 MtrunA17_Chr5g0396691 23.819 487 286 18 57 475 80 549 5.03e-25 109
Msa0121490 MtrunA17_Chr2g0329161 27.361 413 237 16 176 537 659 1059 1.97e-24 108
Msa0121490 MtrunA17_Chr5g0396711 25.606 371 209 14 158 475 193 549 2.20e-24 107
Msa0121490 MtrunA17_Chr1g0194371 28.165 387 212 16 191 526 221 592 1.48e-23 105
Msa0121490 MtrunA17_Chr1g0162621 23.596 534 308 25 20 475 37 548 7.75e-23 102
Msa0121490 MtrunA17_Chr4g0004841 27.200 250 165 7 302 540 89 332 1.23e-22 99.4
Msa0121490 MtrunA17_Chr4g0004101 26.891 238 161 6 310 540 92 323 1.27e-22 99.0
Msa0121490 MtrunA17_Chr1g0160041 27.114 402 203 18 182 515 240 619 1.30e-22 102
Msa0121490 MtrunA17_Chr2g0334121 29.524 210 143 3 1 208 1 207 1.64e-21 92.8
Msa0121490 MtrunA17_Chr4g0034181 23.695 498 289 23 49 475 69 546 3.14e-21 97.8
Msa0121490 MtrunA17_Chr4g0033141 26.299 308 194 11 191 470 675 977 3.25e-20 95.5
Msa0121490 MtrunA17_Chr8g0377991 33.679 193 103 5 316 497 460 638 1.23e-18 89.7
Msa0121490 MtrunA17_Chr8g0377991 30.244 205 117 7 37 216 88 291 4.71e-11 65.5
Msa0121490 MtrunA17_Chr3g0121951 30.964 197 111 5 316 501 453 635 3.89e-16 81.6
Msa0121490 MtrunA17_Chr3g0121931 30.435 184 109 4 316 488 457 632 2.39e-15 79.3
Msa0121490 MtrunA17_Chr3g0121931 26.027 292 169 11 37 297 86 361 9.78e-14 74.3
Msa0121490 MtrunA17_Chr2g0307631 23.592 568 369 21 20 550 180 719 1.11e-13 73.9
Msa0121490 MtrunA17_Chr3g0124631 28.902 173 104 7 311 472 423 587 2.12e-12 70.1
Msa0121490 MtrunA17_Chr3g0120731 29.858 211 122 11 298 497 444 639 3.36e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121490 AT4G05160.1 55.596 545 230 7 1 541 1 537 0.0 596
Msa0121490 AT1G20510.1 43.964 555 292 9 2 551 6 546 8.31e-153 449
Msa0121490 AT1G20480.1 42.805 549 288 12 3 540 24 557 3.95e-144 427
Msa0121490 AT4G19010.1 41.621 543 296 11 6 540 25 554 1.66e-137 410
Msa0121490 AT1G20500.1 42.804 542 296 8 3 541 13 543 7.88e-136 405
Msa0121490 AT5G38120.1 41.379 551 294 12 3 543 14 545 2.08e-133 399
Msa0121490 AT1G65060.1 41.346 520 292 8 26 540 45 556 2.41e-125 379
Msa0121490 AT1G20510.2 42.204 481 260 8 2 477 6 473 1.04e-122 369
Msa0121490 AT5G63380.1 39.469 565 308 14 4 551 15 562 6.32e-122 370
Msa0121490 AT5G38120.3 40.385 520 281 12 3 512 14 514 1.56e-117 357
Msa0121490 AT3G21240.1 40.267 524 294 9 26 540 33 546 5.97e-116 355
Msa0121490 AT3G21230.1 40.076 529 296 10 26 540 39 560 7.63e-110 339
Msa0121490 AT1G20510.3 40.523 459 255 8 2 455 6 451 6.63e-109 333
Msa0121490 AT1G51680.1 39.006 523 307 9 26 540 35 553 2.34e-106 330
Msa0121490 AT5G38120.4 40.619 485 259 12 3 477 14 479 8.84e-106 326
Msa0121490 AT5G38120.2 40.619 485 259 12 3 477 14 479 8.84e-106 326
Msa0121490 AT1G62940.1 35.564 523 325 8 21 540 19 532 1.03e-100 315
Msa0121490 AT3G21230.3 38.922 501 285 10 26 512 39 532 6.36e-97 305
Msa0121490 AT1G51680.3 37.778 495 296 9 26 512 35 525 5.20e-94 297
Msa0121490 AT3G21240.2 38.261 460 265 9 26 476 33 482 3.25e-90 286
Msa0121490 AT3G21240.3 38.261 460 265 9 26 476 33 482 3.25e-90 286
Msa0121490 AT1G65060.2 37.529 437 260 8 26 457 45 473 6.68e-88 280
Msa0121490 AT3G21230.2 38.280 465 266 10 26 476 39 496 6.19e-85 273
Msa0121490 AT1G20490.2 39.070 430 240 11 3 424 13 428 6.13e-82 263
Msa0121490 AT1G20490.1 39.070 430 240 11 3 424 13 428 6.13e-82 263
Msa0121490 AT1G51680.2 37.037 459 277 9 26 476 35 489 9.23e-81 261
Msa0121490 AT3G48990.1 30.786 471 300 10 76 538 52 504 7.74e-51 182
Msa0121490 AT3G21230.4 34.761 397 234 11 26 406 39 426 3.87e-49 176
Msa0121490 AT1G65880.1 27.076 554 345 19 28 540 14 549 1.88e-45 169
Msa0121490 AT1G77240.1 28.022 546 347 19 22 537 5 534 3.87e-44 164
Msa0121490 AT1G65890.1 25.801 562 364 18 28 548 14 563 4.31e-44 165
Msa0121490 AT1G21530.2 27.469 557 340 20 22 537 5 538 9.11e-43 161
Msa0121490 AT1G21530.1 27.949 551 343 21 22 537 5 536 1.41e-42 160
Msa0121490 AT1G66120.1 26.248 541 358 17 28 540 14 541 4.07e-42 159
Msa0121490 AT1G21540.1 28.102 548 349 17 22 537 5 539 5.73e-42 159
Msa0121490 AT1G76290.1 27.788 529 355 15 28 541 14 530 6.41e-42 158
Msa0121490 AT1G20560.1 26.071 560 359 15 28 551 16 556 2.39e-41 157
Msa0121490 AT1G30520.2 25.981 535 344 16 46 540 23 545 3.20e-39 151
Msa0121490 AT1G30520.1 25.981 535 344 16 46 540 23 545 3.20e-39 151
Msa0121490 AT5G16370.1 26.802 541 349 18 26 537 12 534 1.85e-37 146
Msa0121490 AT5G16340.1 26.580 538 354 16 26 537 12 534 4.58e-37 145
Msa0121490 AT1G68270.1 25.714 560 337 18 28 548 14 533 7.47e-36 141
Msa0121490 AT3G16170.1 25.618 566 324 21 35 540 72 600 1.59e-33 135
Msa0121490 AT1G20560.2 26.977 430 269 13 150 551 66 478 1.79e-33 133
Msa0121490 AT1G75960.1 27.072 543 337 20 33 540 19 537 2.73e-33 134
Msa0121490 AT2G17650.1 26.607 560 346 21 17 535 53 588 3.19e-31 128
Msa0121490 AT1G30520.3 25.166 453 298 14 46 472 23 460 5.25e-31 126
Msa0121490 AT1G30520.4 25.166 453 298 14 46 472 23 460 5.25e-31 126
Msa0121490 AT3G16910.1 22.868 551 365 16 31 540 23 554 3.03e-30 125
Msa0121490 AT5G27600.1 25.239 523 310 21 9 463 60 569 1.24e-27 118
Msa0121490 AT5G36880.2 23.464 537 360 15 55 551 197 722 1.42e-27 118
Msa0121490 AT5G36880.6 23.464 537 360 15 55 551 147 672 1.52e-27 117
Msa0121490 AT5G36880.3 23.464 537 360 15 55 551 147 672 1.52e-27 117
Msa0121490 AT5G36880.5 23.464 537 360 15 55 551 147 672 1.52e-27 117
Msa0121490 AT5G36880.1 23.464 537 360 15 55 551 147 672 1.52e-27 117
Msa0121490 AT4G23850.1 24.421 475 274 18 57 463 81 538 7.16e-26 112
Msa0121490 AT4G11030.1 24.000 475 276 17 57 463 81 538 7.16e-26 112
Msa0121490 AT2G47240.1 29.882 338 173 13 191 475 221 547 8.21e-26 112
Msa0121490 AT2G47240.2 29.882 338 173 13 191 475 221 547 8.21e-26 112
Msa0121490 AT2G47240.3 29.882 338 173 13 191 475 221 547 8.21e-26 112
Msa0121490 AT3G05970.1 29.907 321 164 13 191 463 262 569 1.00e-25 112
Msa0121490 AT2G47240.4 29.882 338 173 13 191 475 162 488 1.01e-25 112
Msa0121490 AT1G64400.1 24.699 498 273 23 47 467 69 541 3.26e-24 107
Msa0121490 AT1G49430.1 26.790 377 192 15 189 496 222 583 5.43e-24 106
Msa0121490 AT5G36880.4 23.747 459 302 14 55 476 147 594 9.11e-23 102
Msa0121490 AT3G23790.1 30.876 217 130 5 282 486 423 631 4.49e-18 88.6
Msa0121490 AT4G14070.1 29.545 220 128 7 316 522 474 679 4.75e-15 79.0
Msa0121490 AT4G14070.1 31.841 201 115 7 37 216 106 305 2.18e-14 76.6
Msa0121490 AT1G77590.2 30.000 220 116 9 264 472 243 435 7.48e-14 74.7
Msa0121490 AT1G77590.1 30.000 220 116 9 264 472 389 581 9.76e-14 74.7
Msa0121490 AT2G04350.2 30.288 208 119 10 298 494 437 629 2.01e-11 67.4
Msa0121490 AT2G04350.1 30.288 208 119 10 298 494 437 629 2.01e-11 67.4

Find 179 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATCTCCTTTCAGTTTC+TGG 0.087977 1_3:+47328831 Msa0121490:CDS
CGAATCAATTAGGGGAAATT+TGG 0.173843 1_3:+47328925 Msa0121490:CDS
ATGGCCAGCTTTGTTGCTTC+TGG 0.208360 1_3:-47329124 None:intergenic
TTCTTTGGTTATGGAGCTAT+TGG 0.212877 1_3:-47329742 None:intergenic
TTGAATATCTTCTTTGGTTA+TGG 0.218799 1_3:-47329751 None:intergenic
CATCCAACCTTGATCATTAA+TGG 0.237817 1_3:-47329143 None:intergenic
CCCCTTCCACCGAATCAATT+AGG 0.246857 1_3:+47328915 Msa0121490:CDS
ACAAAATATATCAAAGTTAT+AGG 0.248698 1_3:+47333366 Msa0121490:CDS
CGTTCTTCCCCTCGCCGTTC+TGG 0.263674 1_3:-47326208 None:intergenic
AGAATCTCGTATAGTTAATT+TGG 0.285473 1_3:+47328881 Msa0121490:CDS
GGGATCAGTGGGAAGGTTGA+TGG 0.289930 1_3:-47325583 None:intergenic
GAAGGAGGTTGGGGAGAGGT+TGG 0.300719 1_3:-47325604 None:intergenic
CCCTTCCACCGAATCAATTA+GGG 0.305642 1_3:+47328916 Msa0121490:CDS
GTCGGTGGTGCTGCTCCGTT+GGG 0.310434 1_3:+47326470 Msa0121490:CDS
GAAAGGAGATTTCCTTCCTT+TGG 0.316300 1_3:-47328822 None:intergenic
CTTTCAGTTTCTGGTTCAAC+TGG 0.316511 1_3:+47328840 Msa0121490:CDS
GCGGCGATTCTTTACTCTTC+AGG 0.334954 1_3:+47326104 Msa0121490:CDS
GACGAACCTTCTAAGAAGTT+TGG 0.343303 1_3:+47325987 Msa0121490:CDS
TCCTAAAGTTGGCGAGGTTC+CGG 0.343675 1_3:+47329698 Msa0121490:CDS
TCCTCGTGTCAACGTCATTC+AGG 0.352296 1_3:+47326526 Msa0121490:CDS
TGGGGAGAGGTTGGGATCAG+TGG 0.354004 1_3:-47325595 None:intergenic
TCAAAAGTTTGTAGCAAAAC+AGG 0.356225 1_3:+47329770 Msa0121490:CDS
ATTGGAAGAGGAAGGAGGTT+GGG 0.364249 1_3:-47325614 None:intergenic
CAATAGTTCCGATGATATTC+CGG 0.364859 1_3:+47326052 Msa0121490:CDS
ATCTTTCCTGTGGCTAACTT+TGG 0.368563 1_3:-47333313 None:intergenic
CTAGGACCAAACTTCTTAGA+AGG 0.371426 1_3:-47325993 None:intergenic
GGTTCGTCAAGGAATATTAA+TGG 0.383824 1_3:-47325972 None:intergenic
TTGGAAGAGGAAGGAGGTTG+GGG 0.386791 1_3:-47325613 None:intergenic
GATTGGAAGAGGAAGGAGGT+TGG 0.390261 1_3:-47325615 None:intergenic
GGATCAGTGGGAAGGTTGAT+GGG 0.391325 1_3:-47325582 None:intergenic
ACCGGAACCTCGCCAACTTT+AGG 0.393255 1_3:-47329699 None:intergenic
AGTTATAACAAGCTTGGGCT+TGG 0.394365 1_3:-47325904 None:intergenic
GGTCGGTGGTGCTGCTCCGT+TGG 0.394416 1_3:+47326469 Msa0121490:CDS
GATGGGTGGTAGATTTGATT+TGG 0.396633 1_3:+47326319 Msa0121490:CDS
CAAATTTCCCCTAATTGATT+CGG 0.406286 1_3:-47328924 None:intergenic
GATACAGTTATAACAAGCTT+GGG 0.409402 1_3:-47325909 None:intergenic
AAGGAGGTTGGGGAGAGGTT+GGG 0.413927 1_3:-47325603 None:intergenic
AAAATTGAAGCATTGACCTT+AGG 0.414520 1_3:+47325945 Msa0121490:CDS
CTTCTAAGAAGTTTGGTCCT+AGG 0.415331 1_3:+47325994 Msa0121490:CDS
TTCTAAGAAGTTTGGTCCTA+GGG 0.419318 1_3:+47325995 Msa0121490:CDS
AGCTGAGCTCGAAGACTTGT+TGG 0.421895 1_3:+47329515 Msa0121490:CDS
ATCTTACCTTGCATTATAGT+AGG 0.424026 1_3:-47328957 None:intergenic
AGTTCGGAGAGGGTGTATAA+AGG 0.424090 1_3:-47325861 None:intergenic
ACCTCGCCAACTTTAGGATC+GGG 0.424551 1_3:-47329693 None:intergenic
AGAGGAAGGAGGTTGGGGAG+AGG 0.427569 1_3:-47325608 None:intergenic
CATCCTGAAATTTCTGATGC+CGG 0.429620 1_3:+47329543 Msa0121490:CDS
ATCCTGAAATTTCTGATGCC+GGG 0.430897 1_3:+47329544 Msa0121490:CDS
GGAAGGTTGATGGGTTGTCT+TGG 0.442697 1_3:-47325573 None:intergenic
AACAAGTCTTCGAGCTCAGC+TGG 0.442961 1_3:-47329513 None:intergenic
ACAGGGAAGCGAATAGAGTT+AGG 0.445164 1_3:-47325789 None:intergenic
TGGATGAGTACAGGAGATCT+TGG 0.447208 1_3:+47329160 Msa0121490:CDS
GGTGTCGGCGACGGAGGAAG+TGG 0.448068 1_3:-47325637 None:intergenic
ACTATAGCTAGAAAGCAAAC+AGG 0.452979 1_3:-47325807 None:intergenic
GTTGTCGTCGCTGAAGTATC+TGG 0.455606 1_3:+47326448 Msa0121490:CDS
GTGCCAATGCACCACGTGAT+GGG 0.455758 1_3:+47326245 Msa0121490:CDS
CCCTAATTGATTCGGTGGAA+GGG 0.455832 1_3:-47328916 None:intergenic
ATGTATTTGTCTAGAGAGTT+CGG 0.458312 1_3:-47325877 None:intergenic
ACCCCGGCATCAGAAATTTC+AGG 0.460523 1_3:-47329546 None:intergenic
TCTTTGGTTATGGAGCTATT+GGG 0.462727 1_3:-47329741 None:intergenic
CTTTACTCTTCAGGCACCAC+GGG 0.466001 1_3:+47326113 Msa0121490:CDS
AGATACAGTTATAACAAGCT+TGG 0.467152 1_3:-47325910 None:intergenic
AGGGAACACGGTGGTGTCGA+TGG 0.467282 1_3:+47326301 Msa0121490:CDS
CCCCTAATTGATTCGGTGGA+AGG 0.472230 1_3:-47328917 None:intergenic
GCACCACGTGATGGGGTTGG+TGG 0.479385 1_3:+47326253 Msa0121490:CDS
TTAATAGCTACGGCGGTAGC+AGG 0.481078 1_3:+47326170 Msa0121490:CDS
CCTAATTGATTCGGTGGAAG+GGG 0.482338 1_3:-47328915 None:intergenic
TCCTAGGGTTTCAAACTATG+AGG 0.486711 1_3:+47326010 Msa0121490:CDS
TCTAGGTTGCACCATACAAA+AGG 0.487148 1_3:+47333260 Msa0121490:intron
GGGGAGAGGTTGGGATCAGT+GGG 0.489626 1_3:-47325594 None:intergenic
GAGGGCGATGGTGTCGGCGA+CGG 0.489980 1_3:-47325646 None:intergenic
GTGTGCATCGGCGAGGGCGA+TGG 0.490776 1_3:-47325658 None:intergenic
CACAGGAAAGATCTTAAGAA+AGG 0.494399 1_3:+47333324 Msa0121490:CDS
GTATGTTGCTCCGCCGGTCA+TGG 0.494857 1_3:+47326385 Msa0121490:CDS
AACCCCATCACGTGGTGCAT+TGG 0.494883 1_3:-47326248 None:intergenic
TTATAGGTATATTAATGCAT+TGG 0.495428 1_3:+47333382 Msa0121490:exon
GGAAGTGGATTGGAAGAGGA+AGG 0.495586 1_3:-47325622 None:intergenic
GGCGAAGTAAAGAGTGGGAG+AGG 0.499376 1_3:-47325728 None:intergenic
TCCCACTCTTTACTTCGCCT+CGG 0.499620 1_3:+47325732 Msa0121490:CDS
GGCGATGGTGTCGGCGACGG+AGG 0.503668 1_3:-47325643 None:intergenic
ACTATACGAGATTCTACACT+TGG 0.511285 1_3:-47328873 None:intergenic
TTGATCAGCTCCACCATGAC+CGG 0.514935 1_3:-47326398 None:intergenic
AGGCACCACGGGGAGAAGCA+AGG 0.516589 1_3:+47326124 Msa0121490:CDS
CACCACGTGATGGGGTTGGT+GGG 0.516768 1_3:+47326254 Msa0121490:CDS
TTTCTAGCTATAGTTGCCAT+AGG 0.516953 1_3:+47325816 Msa0121490:CDS
TGATAATTGTGGCAGGGGTA+TGG 0.519509 1_3:+47328762 Msa0121490:intron
TGTGCCAATGCACCACGTGA+TGG 0.525181 1_3:+47326244 Msa0121490:CDS
CGGAGGAAGTGGATTGGAAG+AGG 0.525231 1_3:-47325626 None:intergenic
GGGAACACGGTGGTGTCGAT+GGG 0.526130 1_3:+47326302 Msa0121490:CDS
GGTAGTGGCAATAGCACCTA+TGG 0.527664 1_3:-47325832 None:intergenic
AAGCTGGCCATTAATGATCA+AGG 0.529120 1_3:+47329136 Msa0121490:CDS
AGTGGGAGAGGGCGGAGACA+TGG 0.531913 1_3:-47325716 None:intergenic
GAGCGAACAACAAAAGCCAC+CGG 0.532066 1_3:-47329717 None:intergenic
CACTCCCTTGCTTCTCCCCG+TGG 0.532440 1_3:-47326129 None:intergenic
AAGATTCCAAAGTTAGCCAC+AGG 0.534845 1_3:+47333307 Msa0121490:CDS
GATCAAGGTTGGATGAGTAC+AGG 0.538951 1_3:+47329151 Msa0121490:CDS
CTTTCTTAAGATCTTTCCTG+TGG 0.540080 1_3:-47333323 None:intergenic
ACCGGAGTGTGCATCGGCGA+GGG 0.540521 1_3:-47325664 None:intergenic
GGCACCACGGGGAGAAGCAA+GGG 0.541024 1_3:+47326125 Msa0121490:CDS
CTCACTAAAATTTAAATCGA+AGG 0.541360 1_3:-47333559 None:intergenic
CGTACACGCAGCTGCGGAGA+GGG 0.543322 1_3:+47326282 Msa0121490:CDS
TTTGAGCTGGCGGAAGGTAA+GGG 0.545357 1_3:-47325691 None:intergenic
TTGCACCATACAAAAGGTTA+CGG 0.545634 1_3:+47333266 Msa0121490:CDS
AGTGGATTGGAAGAGGAAGG+AGG 0.546009 1_3:-47325619 None:intergenic
CTGCTTCATCTCTATATATG+TGG 0.546443 1_3:-47333421 None:intergenic
GAGGGTGTATAAAGGACTAC+TGG 0.547287 1_3:-47325853 None:intergenic
TGCATCAAATCTTTCCCCAA+CGG 0.547929 1_3:-47326485 None:intergenic
ATCGGCGAGGGCGATGGTGT+CGG 0.551329 1_3:-47325652 None:intergenic
GATCAAGACCAGAACGGCGA+GGG 0.551357 1_3:+47326200 Msa0121490:CDS
CGGCGACGGAGGAAGTGGAT+TGG 0.551457 1_3:-47325632 None:intergenic
AACCTCGCCAACTTTAGGAT+CGG 0.552992 1_3:-47329694 None:intergenic
ACCACGTGATGGGGTTGGTG+GGG 0.553119 1_3:+47326255 Msa0121490:CDS
CAATCCAGAAGCAACAAAGC+TGG 0.553529 1_3:+47329120 Msa0121490:CDS
ATTTCCCCTAATTGATTCGG+TGG 0.554045 1_3:-47328921 None:intergenic
GCATTTGTATGTTGCTCCGC+CGG 0.556295 1_3:+47326379 Msa0121490:CDS
CCTCGCCTCGTTTGATTCCG+AGG 0.560366 1_3:-47325749 None:intergenic
AAGCGGCGTGACGTTGTTAG+CGG 0.562638 1_3:+47326419 Msa0121490:CDS
TCCATAGAAAATCCAAAGGA+AGG 0.564186 1_3:+47328810 Msa0121490:CDS
GAATATTAATGGTAAACCTA+AGG 0.564328 1_3:-47325961 None:intergenic
AGAGGTTGGGATCAGTGGGA+AGG 0.565746 1_3:-47325590 None:intergenic
GCGGAAGGTAAGGGATTCAC+CGG 0.567196 1_3:-47325682 None:intergenic
AAAGGGGCAACTATTTGTTG+TGG 0.569879 1_3:+47329195 Msa0121490:CDS
TCCTGAAATTTCTGATGCCG+GGG 0.576260 1_3:+47329545 Msa0121490:CDS
TGAGACACATCTCTGTTCAC+CGG 0.578410 1_3:-47326071 None:intergenic
CACCGGAGTGTGCATCGGCG+AGG 0.584029 1_3:-47325665 None:intergenic
AAGTAAAGAGTGGGAGAGGG+CGG 0.587725 1_3:-47325724 None:intergenic
GTATAAAGGACTACTGGTAG+TGG 0.589136 1_3:-47325847 None:intergenic
TTGTCTAGAGAGTTCGGAGA+GGG 0.593263 1_3:-47325871 None:intergenic
ATCAGCTCCACCATGACCGG+CGG 0.593576 1_3:-47326395 None:intergenic
GTTGATGGGTTGTCTTGGTG+AGG 0.596352 1_3:-47325568 None:intergenic
TCTTTACTCTTCAGGCACCA+CGG 0.599552 1_3:+47326112 Msa0121490:CDS
TCTGTTCACCGGAATATCAT+CGG 0.600597 1_3:-47326060 None:intergenic
GCCCTCGCCGATGCACACTC+CGG 0.604791 1_3:+47325663 Msa0121490:CDS
CTATAGCTAGAAAGCAAACA+GGG 0.605051 1_3:-47325806 None:intergenic
GGATTCACCGGAGTGTGCAT+CGG 0.607336 1_3:-47325670 None:intergenic
CAGTTGAACCAGAAACTGAA+AGG 0.607835 1_3:-47328839 None:intergenic
TAAAGTTGGCGAGGTTCCGG+TGG 0.609371 1_3:+47329701 Msa0121490:CDS
TGCCAATGCACCACGTGATG+GGG 0.610925 1_3:+47326246 Msa0121490:CDS
TGGCCATTAATGATCAAGGT+TGG 0.611232 1_3:+47329140 Msa0121490:CDS
AAAGAGCTCATCAAATGTAG+TGG 0.612772 1_3:+47329226 Msa0121490:CDS
AACACGGTGGTGTCGATGGG+TGG 0.612802 1_3:+47326305 Msa0121490:CDS
GCAGCTGCGGAGAGGGAACA+CGG 0.617058 1_3:+47326289 Msa0121490:CDS
CTCGCCAACTTTAGGATCGG+GGG 0.619961 1_3:-47329691 None:intergenic
AATGCACCACGTGATGGGGT+TGG 0.620818 1_3:+47326250 Msa0121490:CDS
TCCGAGGCGAAGTAAAGAGT+GGG 0.622000 1_3:-47325733 None:intergenic
CCTCGGAATCAAACGAGGCG+AGG 0.622728 1_3:+47325749 Msa0121490:CDS
CCCCGATCCTAAAGTTGGCG+AGG 0.624439 1_3:+47329692 Msa0121490:CDS
TCATGGTGGAGCTGATCAAG+CGG 0.626759 1_3:+47326402 Msa0121490:CDS
GCGAAGTAAAGAGTGGGAGA+GGG 0.628346 1_3:-47325727 None:intergenic
TCGTCGCTGAAGTATCTGGT+CGG 0.630836 1_3:+47326452 Msa0121490:CDS
CCTCGCCAACTTTAGGATCG+GGG 0.636923 1_3:-47329692 None:intergenic
TTTAGTGAGTTGATGCACGA+TGG 0.637062 1_3:+47333573 Msa0121490:three_prime_UTR
ACTTCTTAGAAGGTTCGTCA+AGG 0.637951 1_3:-47325983 None:intergenic
TTCCGAGGCGAAGTAAAGAG+TGG 0.638040 1_3:-47325734 None:intergenic
CTTCGCCTCGGAATCAAACG+AGG 0.638276 1_3:+47325744 Msa0121490:CDS
TGTTGCTCCGCCGGTCATGG+TGG 0.639710 1_3:+47326388 Msa0121490:CDS
TCCTCATAGTTTGAAACCCT+AGG 0.639843 1_3:-47326011 None:intergenic
CGGAATCAAACGAGGCGAGG+TGG 0.640367 1_3:+47325752 Msa0121490:CDS
TCGCTGAAGTATCTGGTCGG+TGG 0.648721 1_3:+47326455 Msa0121490:CDS
CGAGGACCTACTATAATGCA+AGG 0.648782 1_3:+47328951 Msa0121490:CDS
TCCCCACCAACCCCATCACG+TGG 0.649872 1_3:-47326256 None:intergenic
ATCAAGACCAGAACGGCGAG+GGG 0.656642 1_3:+47326201 Msa0121490:CDS
TACGGCGGTAGCAGGAGCAG+TGG 0.664834 1_3:+47326178 Msa0121490:CDS
TGTTTCCATAGAAAATCCAA+AGG 0.666777 1_3:+47328806 Msa0121490:CDS
ACCTGAATGACGTTGACACG+AGG 0.667955 1_3:-47326527 None:intergenic
TCGGTGGTGCTGCTCCGTTG+GGG 0.669002 1_3:+47326471 Msa0121490:CDS
GGATCAAGACCAGAACGGCG+AGG 0.669069 1_3:+47326199 Msa0121490:CDS
GGATAACGTACACGCAGCTG+CGG 0.675038 1_3:+47326276 Msa0121490:CDS
TGTGTCTCAATCCGACGTGG+CGG 0.685220 1_3:+47326085 Msa0121490:CDS
TTAGGGGAAATTTGGCTACG+AGG 0.686700 1_3:+47328933 Msa0121490:CDS
GTAAAGAATCGCCGCCACGT+CGG 0.689587 1_3:-47326096 None:intergenic
ACGTACACGCAGCTGCGGAG+AGG 0.692747 1_3:+47326281 Msa0121490:CDS
TATGACTTACGGAATCACCC+CGG 0.696487 1_3:-47329562 None:intergenic
TATGGCATGACTGAAGCATG+TGG 0.712585 1_3:+47328780 Msa0121490:CDS
TTTACTCTTCAGGCACCACG+GGG 0.716922 1_3:+47326114 Msa0121490:CDS
CCTTCCACCGAATCAATTAG+GGG 0.722238 1_3:+47328917 Msa0121490:CDS
AGATGTGTCTCAATCCGACG+TGG 0.741368 1_3:+47326082 Msa0121490:CDS
GCAGTGGATCAAGACCAGAA+CGG 0.745499 1_3:+47326194 Msa0121490:CDS
TTTGTCTAGAGAGTTCGGAG+AGG 0.776768 1_3:-47325872 None:intergenic
GCTGCGGAGAGGGAACACGG+TGG 0.815166 1_3:+47326292 Msa0121490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATATTATGCTTAATT+TGG - chr1_3:47326677-47326696 None:intergenic 10.0%
!!! TTCAACATTTATTTTTTAAT+TGG + chr1_3:47326736-47326755 Msa0121490:intron 10.0%
!!! ATATTTTTTTAATAGTAAAG+AGG + chr1_3:47326915-47326934 Msa0121490:intron 10.0%
!! AAATTTATTTAAATATAACG+AGG + chr1_3:47327843-47327862 Msa0121490:intron 10.0%
!! AAAAAAAAAAGAAAGATAAA+TGG + chr1_3:47327949-47327968 Msa0121490:intron 10.0%
!! TTGAATTAAATTGTAATAAA+AGG + chr1_3:47328342-47328361 Msa0121490:intron 10.0%
!! TGAATTAAATTGTAATAAAA+GGG + chr1_3:47328343-47328362 Msa0121490:intron 10.0%
!!! ATTTTATACATAAATAAATC+AGG + chr1_3:47329356-47329375 Msa0121490:intron 10.0%
!! AGAAAAAAAAAAGATAAAAT+AGG + chr1_3:47330287-47330306 Msa0121490:intron 10.0%
!! AAAATAAAATATAGTGTAAT+AGG - chr1_3:47330964-47330983 None:intergenic 10.0%
!!! ACTATATTTTATTTTTAACA+AGG + chr1_3:47330969-47330988 Msa0121490:intron 10.0%
!!! TAATTTAATTTTTATGTGTT+GGG - chr1_3:47331260-47331279 None:intergenic 10.0%
!!! TTAATTTAATTTTTATGTGT+TGG - chr1_3:47331261-47331280 None:intergenic 10.0%
!! ATAAAAAGTTAATTAAAAGA+GGG - chr1_3:47332392-47332411 None:intergenic 10.0%
!! TATAAAAAGTTAATTAAAAG+AGG - chr1_3:47332393-47332412 None:intergenic 10.0%
!!! AATTTAATTAACTTTTACTT+AGG + chr1_3:47332527-47332546 Msa0121490:intron 10.0%
!!! AATTCAACTATTTTTTTTTA+GGG - chr1_3:47332791-47332810 None:intergenic 10.0%
!!! AAATTCAACTATTTTTTTTT+AGG - chr1_3:47332792-47332811 None:intergenic 10.0%
!! ATTGTCAAAAAAAAAAAAAA+AGG + chr1_3:47333446-47333465 Msa0121490:three_prime_UTR 10.0%
!!! TTTTTAATTGGTTTAAATCA+TGG + chr1_3:47326748-47326767 Msa0121490:intron 15.0%
!!! AAAAAGGAGAAATTTTAATA+TGG + chr1_3:47326862-47326881 Msa0121490:intron 15.0%
!! AGTTTATTAATTGAAATAAG+AGG - chr1_3:47327070-47327089 None:intergenic 15.0%
!!! TGTTTTTTTCTTATAAAGTA+AGG - chr1_3:47327256-47327275 None:intergenic 15.0%
!! GATAAAAATTAAAGTTGTAT+TGG + chr1_3:47327343-47327362 Msa0121490:intron 15.0%
!! AGTATTTAAAGAATTACTTA+TGG + chr1_3:47327437-47327456 Msa0121490:intron 15.0%
!! TAAATGTAAAATGACATAAA+AGG + chr1_3:47327674-47327693 Msa0121490:intron 15.0%
!! AAATGTAAAATGACATAAAA+GGG + chr1_3:47327675-47327694 Msa0121490:intron 15.0%
!!! TATATATACTTTTTTGTCAA+CGG + chr1_3:47327866-47327885 Msa0121490:intron 15.0%
!! TATCATTACTCATATTTATT+AGG + chr1_3:47328281-47328300 Msa0121490:intron 15.0%
!! ATCATTACTCATATTTATTA+GGG + chr1_3:47328282-47328301 Msa0121490:intron 15.0%
!! GAATTTAGATAAAACAATAA+GGG + chr1_3:47328374-47328393 Msa0121490:intron 15.0%
!! ATTAATAATGAAATGTGTAT+TGG - chr1_3:47329484-47329503 None:intergenic 15.0%
!! TACACATTTCATTATTAATT+AGG + chr1_3:47329485-47329504 Msa0121490:intron 15.0%
!!! CATTATTTCTTTTAAAAACA+TGG - chr1_3:47329636-47329655 None:intergenic 15.0%
!!! TCAATTTAATGAATCATTTT+TGG + chr1_3:47329970-47329989 Msa0121490:intron 15.0%
!! TTAAAGCACATATTTATATT+TGG - chr1_3:47330798-47330817 None:intergenic 15.0%
!!! TTTTTCGTTTACTTATTTTA+GGG - chr1_3:47330877-47330896 None:intergenic 15.0%
!!! ATTTTTCGTTTACTTATTTT+AGG - chr1_3:47330878-47330897 None:intergenic 15.0%
!!! TTTTTTTTTCTTTCTCTTTT+TGG - chr1_3:47331069-47331088 None:intergenic 15.0%
!!! AAATACGTTAATTTAACTTT+TGG - chr1_3:47331136-47331155 None:intergenic 15.0%
!! ATTAACTAATATATCATATG+CGG + chr1_3:47331626-47331645 Msa0121490:intron 15.0%
!! ATAAAAATTAAAAATTGGTG+CGG - chr1_3:47331739-47331758 None:intergenic 15.0%
!! ATTATATTAGTAGTATGTAT+TGG + chr1_3:47331788-47331807 Msa0121490:intron 15.0%
!! TTATATTAGTAGTATGTATT+GGG + chr1_3:47331789-47331808 Msa0121490:intron 15.0%
!!! ATTGTTTTTATCTAAGTTTA+CGG + chr1_3:47331953-47331972 Msa0121490:intron 15.0%
!!! TAAATTTATCGGTTATTTAA+AGG + chr1_3:47332349-47332368 Msa0121490:intron 15.0%
!!! TAAGTACAGATTTTTTTTTA+GGG - chr1_3:47332875-47332894 None:intergenic 15.0%
!!! TTAAGTACAGATTTTTTTTT+AGG - chr1_3:47332876-47332895 None:intergenic 15.0%
!! AAAAAAAACAAATTCAAAGA+AGG - chr1_3:47332913-47332932 None:intergenic 15.0%
!! TTAAAATGTAATGATATACT+GGG + chr1_3:47333002-47333021 Msa0121490:intron 15.0%
!! CCTCAAAATAATTATTAATT+AGG - chr1_3:47333029-47333048 None:intergenic 15.0%
!!! CCTAATTAATAATTATTTTG+AGG + chr1_3:47333026-47333045 Msa0121490:intron 15.0%
!! ACAAAATATATCAAAGTTAT+AGG + chr1_3:47333366-47333385 Msa0121490:CDS 15.0%
!!! ATTTAATTTTCAACTTTGTT+TGG - chr1_3:47333534-47333553 None:intergenic 15.0%
!! TCATAAAAACTTAATAGCTA+CGG + chr1_3:47326160-47326179 Msa0121490:CDS 20.0%
!! TTTCTTTATGTGTGTTTATT+TGG - chr1_3:47326896-47326915 None:intergenic 20.0%
!! GTATTTATTGAAGGTAAAAT+TGG + chr1_3:47327318-47327337 Msa0121490:intron 20.0%
!!! TCATATAATGGAAATACTAA+TGG - chr1_3:47327466-47327485 None:intergenic 20.0%
!!! TATTTTTTGTCAACAACATA+AGG + chr1_3:47327898-47327917 Msa0121490:intron 20.0%
!! AAAAAAAGAAAGATAAATGG+AGG + chr1_3:47327952-47327971 Msa0121490:intron 20.0%
!! TTGTCAAAAAAAAAATAACG+AGG + chr1_3:47328071-47328090 Msa0121490:intron 20.0%
!! TGTCAAAAAAAAAATAACGA+GGG + chr1_3:47328072-47328091 Msa0121490:intron 20.0%
!! TTTATTAGGGAAAAAAAATC+AGG + chr1_3:47328295-47328314 Msa0121490:intron 20.0%
!! TTATTAGGGAAAAAAAATCA+GGG + chr1_3:47328296-47328315 Msa0121490:intron 20.0%
!! TTGTAATAAAAGGGTAAAAA+TGG + chr1_3:47328352-47328371 Msa0121490:intron 20.0%
!! GGAATTTAGATAAAACAATA+AGG + chr1_3:47328373-47328392 Msa0121490:intron 20.0%
!!! AAAAAGAAAGCATGTTTATT+AGG - chr1_3:47328653-47328672 None:intergenic 20.0%
!!! AATAAACATGCTTTCTTTTT+TGG + chr1_3:47328653-47328672 Msa0121490:intron 20.0%
!! AAACTATTTGCATATTAGTA+TGG + chr1_3:47328699-47328718 Msa0121490:intron 20.0%
!!! TATTTCTTTTAAAAACATGG+TGG - chr1_3:47329633-47329652 None:intergenic 20.0%
!!! AAACTTTTGAATATCTTCTT+TGG - chr1_3:47329760-47329779 None:intergenic 20.0%
!!! AGTTGAGATCTTTATATTTT+CGG + chr1_3:47328626-47328645 Msa0121490:intron 20.0%
!! ATTCATTAAATTGAAATGCA+GGG - chr1_3:47329964-47329983 None:intergenic 20.0%
!!! GGTAATTTTTTAATCTACAT+AGG + chr1_3:47330257-47330276 Msa0121490:intron 20.0%
!!! ACGAATCAACTATTTTTTTT+TGG - chr1_3:47330334-47330353 None:intergenic 20.0%
!! AAGAGAAAGAAAAAAAAAGA+AGG + chr1_3:47331071-47331090 Msa0121490:intron 20.0%
!!! ATAAAGTCAAGTTATTTTAC+CGG - chr1_3:47331171-47331190 None:intergenic 20.0%
!!! AGACTTTATTTATCATTTGT+TGG - chr1_3:47331194-47331213 None:intergenic 20.0%
!!! GATAAATAAAGTCTTTCTTT+TGG + chr1_3:47331200-47331219 Msa0121490:intron 20.0%
!! TAACATGTTAATCATTAGAT+TGG - chr1_3:47331378-47331397 None:intergenic 20.0%
!! TTAACTAATATATCATATGC+GGG + chr1_3:47331627-47331646 Msa0121490:intron 20.0%
!!! CAAAATAACTTCTTTTTTTG+TGG + chr1_3:47331891-47331910 Msa0121490:intron 20.0%
!! AACAATGTATAATATATACG+AGG - chr1_3:47331939-47331958 None:intergenic 20.0%
!!! CTTTTATCTTTTTTGAGTAA+TGG - chr1_3:47332068-47332087 None:intergenic 20.0%
!! CAAATTTATTAGTCATTAGA+GGG + chr1_3:47332424-47332443 Msa0121490:intron 20.0%
!! ATAGAATTAATTGTACATGT+GGG - chr1_3:47332687-47332706 None:intergenic 20.0%
!! AATAGAATTAATTGTACATG+TGG - chr1_3:47332688-47332707 None:intergenic 20.0%
!!! AAGTACAGATTTTTTTTTAG+GGG - chr1_3:47332874-47332893 None:intergenic 20.0%
!! GTTAAAATGTAATGATATAC+TGG + chr1_3:47333001-47333020 Msa0121490:intron 20.0%
!! TTATAGGTATATTAATGCAT+TGG + chr1_3:47333382-47333401 Msa0121490:exon 20.0%
! GAATATTAATGGTAAACCTA+AGG - chr1_3:47325964-47325983 None:intergenic 25.0%
!! TTAATTGGTTTAAATCATGG+TGG + chr1_3:47326751-47326770 Msa0121490:intron 25.0%
!! TAATTGGTTTAAATCATGGT+GGG + chr1_3:47326752-47326771 Msa0121490:intron 25.0%
! TTCAACAATCATTCTCTTAT+TGG - chr1_3:47326833-47326852 None:intergenic 25.0%
! TGTTGAAGAGAATGTTAAAA+AGG + chr1_3:47326846-47326865 Msa0121490:intron 25.0%
! TTGAAATAAGAGGAATGTTA+GGG - chr1_3:47327060-47327079 None:intergenic 25.0%
! ATTGAAATAAGAGGAATGTT+AGG - chr1_3:47327061-47327080 None:intergenic 25.0%
! AAATTGTGTGATAGAAAAGT+TGG + chr1_3:47327294-47327313 Msa0121490:intron 25.0%
!! AAAGTTGGAGTATTTATTGA+AGG + chr1_3:47327309-47327328 Msa0121490:intron 25.0%
! TATATATTGTGAGCAACATA+AGG + chr1_3:47327975-47327994 Msa0121490:intron 25.0%
! AACATAAGGCAAAAGATAAA+TGG + chr1_3:47327989-47328008 Msa0121490:intron 25.0%
! AAGTGAGATAAATAATAACG+AGG + chr1_3:47328041-47328060 Msa0121490:intron 25.0%
! AGTGAGATAAATAATAACGA+GGG + chr1_3:47328042-47328061 Msa0121490:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr1_3:47328211-47328230 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr1_3:47328224-47328243 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr1_3:47328223-47328242 Msa0121490:intron 25.0%
! AAAAATCAGGGATGTATATT+AGG + chr1_3:47328308-47328327 Msa0121490:intron 25.0%
! AAAATCAGGGATGTATATTA+GGG + chr1_3:47328309-47328328 Msa0121490:intron 25.0%
! TAAAACAATAAGGGTAAAAG+TGG + chr1_3:47328383-47328402 Msa0121490:intron 25.0%
! AGAATCTCGTATAGTTAATT+TGG + chr1_3:47328881-47328900 Msa0121490:CDS 25.0%
!!! TCTTGGATATTTTGATGAAA+AGG + chr1_3:47329177-47329196 Msa0121490:CDS 25.0%
!!! CTTGGATATTTTGATGAAAA+GGG + chr1_3:47329178-47329197 Msa0121490:CDS 25.0%
!!! TTGGATATTTTGATGAAAAG+GGG + chr1_3:47329179-47329198 Msa0121490:CDS 25.0%
! AATTGAATCCTCTACAATTA+TGG - chr1_3:47329314-47329333 None:intergenic 25.0%
! AGGATAACAAATTAACAATG+TGG + chr1_3:47329376-47329395 Msa0121490:intron 25.0%
! GAGCATTAAAATATGACTTA+CGG - chr1_3:47329576-47329595 None:intergenic 25.0%
! TAAAAGAAATAATGACTCAC+CGG + chr1_3:47329642-47329661 Msa0121490:intron 25.0%
! TTGAATATCTTCTTTGGTTA+TGG - chr1_3:47329754-47329773 None:intergenic 25.0%
! GATTCATTAAATTGAAATGC+AGG - chr1_3:47329965-47329984 None:intergenic 25.0%
!!! TGTTTTAGACTAAGTTACTT+AGG + chr1_3:47330388-47330407 Msa0121490:intron 25.0%
!! AATTTAAGATGGTAGGATAA+GGG + chr1_3:47330425-47330444 Msa0121490:intron 25.0%
!!! CTTCAGTTTGTAGTTTTATA+TGG - chr1_3:47330655-47330674 None:intergenic 25.0%
! GCACATATTTATATTTGGAA+GGG - chr1_3:47330793-47330812 None:intergenic 25.0%
! AGCACATATTTATATTTGGA+AGG - chr1_3:47330794-47330813 None:intergenic 25.0%
!! AAACACTGAAGTTTTACAAA+TGG + chr1_3:47331031-47331050 Msa0121490:intron 25.0%
!! TTTTTATGTGTTGGGTAATA+TGG - chr1_3:47331252-47331271 None:intergenic 25.0%
!! GTATAATGGAATTCCTTTAA+AGG - chr1_3:47331565-47331584 None:intergenic 25.0%
! TCAGATTTACTTTGGTATAA+TGG - chr1_3:47331579-47331598 None:intergenic 25.0%
!!! AATAACTTCTTTTTTTGTGG+TGG + chr1_3:47331894-47331913 Msa0121490:intron 25.0%
! TCTATCTACAAAATCTTCTT+CGG - chr1_3:47332208-47332227 None:intergenic 25.0%
! CCTCTAATGACTAATAAATT+TGG - chr1_3:47332426-47332445 None:intergenic 25.0%
! CCAAATTTATTAGTCATTAG+AGG + chr1_3:47332423-47332442 Msa0121490:intron 25.0%
! ATTTACAATGGTGCTTAATA+GGG - chr1_3:47332576-47332595 None:intergenic 25.0%
! TATTTACAATGGTGCTTAAT+AGG - chr1_3:47332577-47332596 None:intergenic 25.0%
! TAGAATTAATTGTACATGTG+GGG - chr1_3:47332686-47332705 None:intergenic 25.0%
! ATGTCAACTAAAATTTCCAA+CGG - chr1_3:47332834-47332853 None:intergenic 25.0%
!!! AGTACAGATTTTTTTTTAGG+GGG - chr1_3:47332873-47332892 None:intergenic 25.0%
!!! TAATAATTATTTTGAGGTGC+TGG + chr1_3:47333032-47333051 Msa0121490:intron 25.0%
!!! AATAATTATTTTGAGGTGCT+GGG + chr1_3:47333033-47333052 Msa0121490:intron 25.0%
! TATATATATATCCACTCATC+TGG - chr1_3:47333173-47333192 None:intergenic 25.0%
!!! TTGTTTTATTTCCTTTGTCT+AGG + chr1_3:47333243-47333262 Msa0121490:intron 25.0%
! CTCACTAAAATTTAAATCGA+AGG - chr1_3:47333562-47333581 None:intergenic 25.0%
ATGTATTTGTCTAGAGAGTT+CGG - chr1_3:47325880-47325899 None:intergenic 30.0%
GATACAGTTATAACAAGCTT+GGG - chr1_3:47325912-47325931 None:intergenic 30.0%
AGATACAGTTATAACAAGCT+TGG - chr1_3:47325913-47325932 None:intergenic 30.0%
!! AAAATTGAAGCATTGACCTT+AGG + chr1_3:47325945-47325964 Msa0121490:CDS 30.0%
TAAAAACTTAATAGCTACGG+CGG + chr1_3:47326163-47326182 Msa0121490:CDS 30.0%
!! TGATTTGGAGAAGATTTTTG+CGG + chr1_3:47326334-47326353 Msa0121490:CDS 30.0%
GTTGAAGTGAGTGTTAAAAA+GGG - chr1_3:47326722-47326741 None:intergenic 30.0%
TGTTGAAGTGAGTGTTAAAA+AGG - chr1_3:47326723-47326742 None:intergenic 30.0%
TGTATGACCATCACTTTAAA+TGG - chr1_3:47326800-47326819 None:intergenic 30.0%
GACACAAACACATAAAAAGA+TGG - chr1_3:47326976-47326995 None:intergenic 30.0%
! GTCCAAAAACAATGTTGATT+TGG + chr1_3:47326993-47327012 Msa0121490:intron 30.0%
! GACCAAATCAACATTGTTTT+TGG - chr1_3:47326998-47327017 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_3:47327164-47327183 None:intergenic 30.0%
!! TTCCTTAATTTGTGTGCAAT+TGG - chr1_3:47327190-47327209 None:intergenic 30.0%
!! TTCAAAATGAGTGTCACTTT+AGG - chr1_3:47327409-47327428 None:intergenic 30.0%
!! AAGTGACACTCATTTTGAAA+CGG + chr1_3:47327410-47327429 Msa0121490:intron 30.0%
! GAAGTGTTTGGTAAAATTAG+CGG + chr1_3:47327638-47327657 Msa0121490:intron 30.0%
!!! ATATACTTTTTTGTCAACGG+AGG + chr1_3:47327869-47327888 Msa0121490:intron 30.0%
ATAAGGCAAAAGATAAATGG+AGG + chr1_3:47327992-47328011 Msa0121490:intron 30.0%
GTCAAAAAGTTGTCAAAAAG+TGG - chr1_3:47328131-47328150 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr1_3:47328198-47328217 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr1_3:47328249-47328268 Msa0121490:intron 30.0%
GATGTATATTAGGGAATTGT+AGG + chr1_3:47328318-47328337 Msa0121490:intron 30.0%
TGAAATAAGCTATAAGCTCA+TGG + chr1_3:47328476-47328495 Msa0121490:intron 30.0%
! TTGACAAAAATAGCTCTGTT+TGG - chr1_3:47328515-47328534 None:intergenic 30.0%
!!! AAGAGCTAAAAGCTCTTTTT+TGG + chr1_3:47328557-47328576 Msa0121490:intron 30.0%
CATGTTGTGTATGATAATTG+TGG + chr1_3:47328751-47328770 Msa0121490:intron 30.0%
TGTTTCCATAGAAAATCCAA+AGG + chr1_3:47328806-47328825 Msa0121490:CDS 30.0%
CAAATTTCCCCTAATTGATT+CGG - chr1_3:47328927-47328946 None:intergenic 30.0%
ATCTTACCTTGCATTATAGT+AGG - chr1_3:47328960-47328979 None:intergenic 30.0%
!! TTCTTTTAAAAACATGGTGG+TGG - chr1_3:47329630-47329649 None:intergenic 30.0%
AAAAGAAATAATGACTCACC+GGG + chr1_3:47329643-47329662 Msa0121490:intron 30.0%
TCAAAAGTTTGTAGCAAAAC+AGG + chr1_3:47329770-47329789 Msa0121490:CDS 30.0%
ATTAAATTGAAATGCAGGGT+TGG - chr1_3:47329960-47329979 None:intergenic 30.0%
!! ATGCGATTTATTTTCTTGCT+CGG - chr1_3:47330125-47330144 None:intergenic 30.0%
TTGGATTAACATACGACTTT+CGG - chr1_3:47330315-47330334 None:intergenic 30.0%
GATTCGTCAACCTATATTTA+AGG + chr1_3:47330347-47330366 Msa0121490:intron 30.0%
AGTTACTTAGGTTTGTCAAA+TGG + chr1_3:47330400-47330419 Msa0121490:intron 30.0%
GTCAAATGGAGAATTTAAGA+TGG + chr1_3:47330414-47330433 Msa0121490:intron 30.0%
! AATGGAGAATTTAAGATGGT+AGG + chr1_3:47330418-47330437 Msa0121490:intron 30.0%
! GAATTTAAGATGGTAGGATA+AGG + chr1_3:47330424-47330443 Msa0121490:intron 30.0%
TTTGCATCACTTTCTTTGTA+CGG - chr1_3:47330584-47330603 None:intergenic 30.0%
ATATTGCACTCTTTCCTTTA+AGG + chr1_3:47330756-47330775 Msa0121490:intron 30.0%
! GCTTTAACTTTATGAGCAAT+TGG + chr1_3:47330811-47330830 Msa0121490:intron 30.0%
TAAACGAAAAATTATCCCGA+GGG + chr1_3:47330886-47330905 Msa0121490:intron 30.0%
! GTATTTCAGACCATTTTATC+CGG - chr1_3:47331332-47331351 None:intergenic 30.0%
TATAACTTCTTCAGCAACAT+TGG - chr1_3:47331401-47331420 None:intergenic 30.0%
!! ATCAGCTAATCACTTGTTTT+TGG - chr1_3:47331426-47331445 None:intergenic 30.0%
! CATTTTTGTGTGAATAAGTG+TGG - chr1_3:47331458-47331477 None:intergenic 30.0%
!! TAGAAATCGACTTTTTATCG+AGG - chr1_3:47331517-47331536 None:intergenic 30.0%
!! TAAAGGTGTTTGTGTTTACT+TGG - chr1_3:47331548-47331567 None:intergenic 30.0%
GTAAACACAAACACCTTTAA+AGG + chr1_3:47331549-47331568 Msa0121490:intron 30.0%
! CAACTGATTCAGATTTACTT+TGG - chr1_3:47331587-47331606 None:intergenic 30.0%
! GATCTAATTGCTATTGTCAA+TGG + chr1_3:47331649-47331668 Msa0121490:intron 30.0%
TTTACAATGGTGCTTAATAG+GGG - chr1_3:47332575-47332594 None:intergenic 30.0%
! TATTCATTGGTGACACAAAA+GGG - chr1_3:47332605-47332624 None:intergenic 30.0%
! ATATTCATTGGTGACACAAA+AGG - chr1_3:47332606-47332625 None:intergenic 30.0%
! TTTTGTGTCACCAATGAATA+TGG + chr1_3:47332605-47332624 Msa0121490:intron 30.0%
TTCATAAGCACCATATTCAT+TGG - chr1_3:47332618-47332637 None:intergenic 30.0%
AATGAATATGGTGCTTATGA+AGG + chr1_3:47332617-47332636 Msa0121490:intron 30.0%
!!! TCGTACGCTTACATTTTTTA+CGG - chr1_3:47333199-47333218 None:intergenic 30.0%
TAAAAAATGTAAGCGTACGA+AGG + chr1_3:47333199-47333218 Msa0121490:intron 30.0%
!! ATTTTCAACTTTGTTTGGTG+AGG - chr1_3:47333529-47333548 None:intergenic 30.0%
!! AGGAATACGTCATTGTTTTG+AGG - chr1_3:47325551-47325570 None:intergenic 35.0%
CTATAGCTAGAAAGCAAACA+GGG - chr1_3:47325809-47325828 None:intergenic 35.0%
ACTATAGCTAGAAAGCAAAC+AGG - chr1_3:47325810-47325829 None:intergenic 35.0%
!! TTTCTAGCTATAGTTGCCAT+AGG + chr1_3:47325816-47325835 Msa0121490:CDS 35.0%
GGTTCGTCAAGGAATATTAA+TGG - chr1_3:47325975-47325994 None:intergenic 35.0%
! TTCTAAGAAGTTTGGTCCTA+GGG + chr1_3:47325995-47326014 Msa0121490:CDS 35.0%
CAATAGTTCCGATGATATTC+CGG + chr1_3:47326052-47326071 Msa0121490:CDS 35.0%
! TGGGTTTCACACTTTGAAAA+TGG + chr1_3:47326771-47326790 Msa0121490:intron 35.0%
! GGGTTTCACACTTTGAAAAT+GGG + chr1_3:47326772-47326791 Msa0121490:intron 35.0%
! ATGGGTTCCATTTAAAGTGA+TGG + chr1_3:47326790-47326809 Msa0121490:intron 35.0%
!! ACAATGTTGATTTGGTCTTG+TGG + chr1_3:47327001-47327020 Msa0121490:intron 35.0%
! TTTAACGAGGTATTCTTCCA+TGG - chr1_3:47327027-47327046 None:intergenic 35.0%
AGCCAATTGCACACAAATTA+AGG + chr1_3:47327185-47327204 Msa0121490:intron 35.0%
!! GAGTCACATACACTTTTTGA+GGG - chr1_3:47327527-47327546 None:intergenic 35.0%
!! AGAGTCACATACACTTTTTG+AGG - chr1_3:47327528-47327547 None:intergenic 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + chr1_3:47327626-47327645 Msa0121490:intron 35.0%
CATAAGGCAAGAGAGATAAA+TGG + chr1_3:47327914-47327933 Msa0121490:intron 35.0%
TTGCATATTAGTATGGCATG+TGG + chr1_3:47328706-47328725 Msa0121490:intron 35.0%
TGCATATTAGTATGGCATGT+GGG + chr1_3:47328707-47328726 Msa0121490:intron 35.0%
TTGTGTATGATAATTGTGGC+AGG + chr1_3:47328755-47328774 Msa0121490:intron 35.0%
TGTGTATGATAATTGTGGCA+GGG + chr1_3:47328756-47328775 Msa0121490:intron 35.0%
TCCATAGAAAATCCAAAGGA+AGG + chr1_3:47328810-47328829 Msa0121490:CDS 35.0%
! TCCTTCCTTTGGATTTTCTA+TGG - chr1_3:47328814-47328833 None:intergenic 35.0%
ACTATACGAGATTCTACACT+TGG - chr1_3:47328876-47328895 None:intergenic 35.0%
CGAATCAATTAGGGGAAATT+TGG + chr1_3:47328925-47328944 Msa0121490:CDS 35.0%
CATCCAACCTTGATCATTAA+TGG - chr1_3:47329146-47329165 None:intergenic 35.0%
AAAGAGCTCATCAAATGTAG+TGG + chr1_3:47329226-47329245 Msa0121490:CDS 35.0%
AATTCCCACCATAATTGTAG+AGG + chr1_3:47329303-47329322 Msa0121490:intron 35.0%
GAATCCTCTACAATTATGGT+GGG - chr1_3:47329310-47329329 None:intergenic 35.0%
TGAATCCTCTACAATTATGG+TGG - chr1_3:47329311-47329330 None:intergenic 35.0%
TTAGAATTGTCACAAAGTCC+CGG - chr1_3:47329664-47329683 None:intergenic 35.0%
TCTTTGGTTATGGAGCTATT+GGG - chr1_3:47329744-47329763 None:intergenic 35.0%
TTCTTTGGTTATGGAGCTAT+TGG - chr1_3:47329745-47329764 None:intergenic 35.0%
GGATAAAAACGAATGTGGTT+TGG - chr1_3:47329882-47329901 None:intergenic 35.0%
! TTCCCAAAGCATCATTATAG+CGG + chr1_3:47330074-47330093 Msa0121490:intron 35.0%
!! TGCGATTTATTTTCTTGCTC+GGG - chr1_3:47330124-47330143 None:intergenic 35.0%
ATCGCATGAAACCTTGTAAA+AGG + chr1_3:47330138-47330157 Msa0121490:intron 35.0%
! TTATGAGGATGCCTTTTACA+AGG - chr1_3:47330152-47330171 None:intergenic 35.0%
TCCTCATAATTTCCCTAAAG+AGG + chr1_3:47330163-47330182 Msa0121490:intron 35.0%
CCTCATAATTTCCCTAAAGA+GGG + chr1_3:47330164-47330183 Msa0121490:intron 35.0%
ATTTCACCTTGAGGTCAAAA+TGG + chr1_3:47330189-47330208 Msa0121490:intron 35.0%
!! GTAAATCCATTTTGACCTCA+AGG - chr1_3:47330198-47330217 None:intergenic 35.0%
GCTACACTATAGATCATTCT+TGG - chr1_3:47330220-47330239 None:intergenic 35.0%
TCGTCAACCTATATTTAAGG+TGG + chr1_3:47330350-47330369 Msa0121490:intron 35.0%
! ACCTATATTTAAGGTGGAGT+TGG + chr1_3:47330356-47330375 Msa0121490:intron 35.0%
ACCAACTCCACCTTAAATAT+AGG - chr1_3:47330360-47330379 None:intergenic 35.0%
!! TATTTAAGGTGGAGTTGGTA+AGG + chr1_3:47330361-47330380 Msa0121490:intron 35.0%
AAGATCACATTGATCTTGAG+AGG + chr1_3:47330484-47330503 Msa0121490:intron 35.0%
TTGCATCACTTTCTTTGTAC+GGG - chr1_3:47330583-47330602 None:intergenic 35.0%
AAAGAAAGTGATGCAAACCT+TGG + chr1_3:47330587-47330606 Msa0121490:intron 35.0%
! TGTGATTGTTGTTAAGTCCA+AGG - chr1_3:47330607-47330626 None:intergenic 35.0%
TGGCAAAGATGAACTACATT+AGG + chr1_3:47330831-47330850 Msa0121490:intron 35.0%
! TTTAGGGTTCTTCTCTTTCA+AGG - chr1_3:47330861-47330880 None:intergenic 35.0%
GTAAACGAAAAATTATCCCG+AGG + chr1_3:47330885-47330904 Msa0121490:intron 35.0%
TTAGATACCCAAACAAGAGA+AGG + chr1_3:47331105-47331124 Msa0121490:intron 35.0%
TAGATACCCAAACAAGAGAA+GGG + chr1_3:47331106-47331125 Msa0121490:intron 35.0%
! CGTATTTTATCTTCAACCAC+CGG + chr1_3:47331149-47331168 Msa0121490:intron 35.0%
!! AAGTCAAGTTATTTTACCGG+TGG - chr1_3:47331168-47331187 None:intergenic 35.0%
TGCATGTTAAATAGCCAAAC+CGG + chr1_3:47331310-47331329 Msa0121490:intron 35.0%
AATAGCCAAACCGGATAAAA+TGG + chr1_3:47331319-47331338 Msa0121490:intron 35.0%
TCTACAAAATCTTCTTCGGT+GGG - chr1_3:47332204-47332223 None:intergenic 35.0%
ATCTACAAAATCTTCTTCGG+TGG - chr1_3:47332205-47332224 None:intergenic 35.0%
!! AGAGGGATATTTTAGAGACA+TGG - chr1_3:47332375-47332394 None:intergenic 35.0%
TAGTCATTAGAGGGTGATTT+AGG + chr1_3:47332433-47332452 Msa0121490:intron 35.0%
TTTACTTAGGCCATCTACAA+TGG + chr1_3:47332540-47332559 Msa0121490:intron 35.0%
TTACTTAGGCCATCTACAAT+GGG + chr1_3:47332541-47332560 Msa0121490:intron 35.0%
!! AAAGGGGTGCTTATTTACAA+TGG - chr1_3:47332588-47332607 None:intergenic 35.0%
! ATTCATTGGTGACACAAAAG+GGG - chr1_3:47332604-47332623 None:intergenic 35.0%
TAGAATTCATTCCAGATGAG+TGG + chr1_3:47333159-47333178 Msa0121490:intron 35.0%
TTGCACCATACAAAAGGTTA+CGG + chr1_3:47333266-47333285 Msa0121490:CDS 35.0%
CTTTCTTAAGATCTTTCCTG+TGG - chr1_3:47333326-47333345 None:intergenic 35.0%
CACAGGAAAGATCTTAAGAA+AGG + chr1_3:47333324-47333343 Msa0121490:CDS 35.0%
CTGCTTCATCTCTATATATG+TGG - chr1_3:47333424-47333443 None:intergenic 35.0%
!!! AAAAGGAGTGCTTTGTTTTC+TGG + chr1_3:47333463-47333482 Msa0121490:three_prime_UTR 35.0%
GTATAAAGGACTACTGGTAG+TGG - chr1_3:47325850-47325869 None:intergenic 40.0%
AGTTATAACAAGCTTGGGCT+TGG - chr1_3:47325907-47325926 None:intergenic 40.0%
ACTTCTTAGAAGGTTCGTCA+AGG - chr1_3:47325986-47326005 None:intergenic 40.0%
! GACGAACCTTCTAAGAAGTT+TGG + chr1_3:47325987-47326006 Msa0121490:CDS 40.0%
CTAGGACCAAACTTCTTAGA+AGG - chr1_3:47325996-47326015 None:intergenic 40.0%
! CTTCTAAGAAGTTTGGTCCT+AGG + chr1_3:47325994-47326013 Msa0121490:CDS 40.0%
TCCTAGGGTTTCAAACTATG+AGG + chr1_3:47326010-47326029 Msa0121490:CDS 40.0%
! TCCTCATAGTTTGAAACCCT+AGG - chr1_3:47326014-47326033 None:intergenic 40.0%
TCTGTTCACCGGAATATCAT+CGG - chr1_3:47326063-47326082 None:intergenic 40.0%
GATGGGTGGTAGATTTGATT+TGG + chr1_3:47326319-47326338 Msa0121490:CDS 40.0%
! TTTGGAGAAGATTTTTGCGG+CGG + chr1_3:47326337-47326356 Msa0121490:CDS 40.0%
TGCATCAAATCTTTCCCCAA+CGG - chr1_3:47326488-47326507 None:intergenic 40.0%
AATCAAGCTAATGCCTCGAA+AGG - chr1_3:47326598-47326617 None:intergenic 40.0%
ACCATGTGATAAACGTTGCA+AGG + chr1_3:47326650-47326669 Msa0121490:intron 40.0%
ACCTTGCAACGTTTATCACA+TGG - chr1_3:47326654-47326673 None:intergenic 40.0%
GACTCTTTGTGAAAGATGCT+CGG + chr1_3:47327542-47327561 Msa0121490:intron 40.0%
AAGGCAAGAGAGATAAATGG+AGG + chr1_3:47327917-47327936 Msa0121490:intron 40.0%
CTATAAGCTCAAACGCTACT+TGG + chr1_3:47328422-47328441 Msa0121490:intron 40.0%
TCATTCACTCTCTATGACCT+CGG - chr1_3:47328599-47328618 None:intergenic 40.0%
TATTAGTATGGCATGTGGGA+TGG + chr1_3:47328711-47328730 Msa0121490:intron 40.0%
GTGTATGATAATTGTGGCAG+GGG + chr1_3:47328757-47328776 Msa0121490:intron 40.0%
GAAAGGAGATTTCCTTCCTT+TGG - chr1_3:47328825-47328844 None:intergenic 40.0%
GGAAATCTCCTTTCAGTTTC+TGG + chr1_3:47328831-47328850 Msa0121490:CDS 40.0%
CAGTTGAACCAGAAACTGAA+AGG - chr1_3:47328842-47328861 None:intergenic 40.0%
!! CTTTCAGTTTCTGGTTCAAC+TGG + chr1_3:47328840-47328859 Msa0121490:CDS 40.0%
!! ATTTCCCCTAATTGATTCGG+TGG - chr1_3:47328924-47328943 None:intergenic 40.0%
AAGCTGGCCATTAATGATCA+AGG + chr1_3:47329136-47329155 Msa0121490:CDS 40.0%
TGGCCATTAATGATCAAGGT+TGG + chr1_3:47329140-47329159 Msa0121490:CDS 40.0%
! AAAGGGGCAACTATTTGTTG+TGG + chr1_3:47329195-47329214 Msa0121490:CDS 40.0%
CATCCTGAAATTTCTGATGC+CGG + chr1_3:47329543-47329562 Msa0121490:CDS 40.0%
ATCCTGAAATTTCTGATGCC+GGG + chr1_3:47329544-47329563 Msa0121490:CDS 40.0%
GTCACGGATAAAAACGAATG+TGG - chr1_3:47329887-47329906 None:intergenic 40.0%
!! TCGTTTTTATCCGTGACAAG+TGG + chr1_3:47329890-47329909 Msa0121490:intron 40.0%
! CGTTTTTATCCGTGACAAGT+GGG + chr1_3:47329891-47329910 Msa0121490:intron 40.0%
CTCCGCTATAATGATGCTTT+GGG - chr1_3:47330079-47330098 None:intergenic 40.0%
TCTCCGCTATAATGATGCTT+TGG - chr1_3:47330080-47330099 None:intergenic 40.0%
! CCCTCTTTAGGGAAATTATG+AGG - chr1_3:47330167-47330186 None:intergenic 40.0%
AGGTGAAATCTCCCTCTTTA+GGG - chr1_3:47330178-47330197 None:intergenic 40.0%
AAGGTGAAATCTCCCTCTTT+AGG - chr1_3:47330179-47330198 None:intergenic 40.0%
TAGCCACTTACTCTAGTAGT+CGG + chr1_3:47330236-47330255 Msa0121490:intron 40.0%
! TTACCGACTACTAGAGTAAG+TGG - chr1_3:47330242-47330261 None:intergenic 40.0%
TGCATCACTTTCTTTGTACG+GGG - chr1_3:47330582-47330601 None:intergenic 40.0%
! GGGCTCTCTTTTATCCTTAA+AGG - chr1_3:47330773-47330792 None:intergenic 40.0%
AAGCCAAAAAGATCAGACGT+GGG + chr1_3:47330909-47330928 Msa0121490:intron 40.0%
! GGTTATCCCTTCTCTTGTTT+GGG - chr1_3:47331115-47331134 None:intergenic 40.0%
TGGTTATCCCTTCTCTTGTT+TGG - chr1_3:47331116-47331135 None:intergenic 40.0%
! TCAGACCATTTTATCCGGTT+TGG - chr1_3:47331327-47331346 None:intergenic 40.0%
!!! TTCTTTTTTTGTGGTGGCTG+AGG + chr1_3:47331900-47331919 Msa0121490:intron 40.0%
CTACAAAATCTTCTTCGGTG+GGG - chr1_3:47332203-47332222 None:intergenic 40.0%
TACTTAGGCCATCTACAATG+GGG + chr1_3:47332542-47332561 Msa0121490:intron 40.0%
ATGAAGGTGAGTGCTTGTAT+AGG + chr1_3:47332633-47332652 Msa0121490:intron 40.0%
CTTGAGTAATAGGAGAGAGA+GGG - chr1_3:47332661-47332680 None:intergenic 40.0%
CTCTCTCTCCTATTACTCAA+GGG + chr1_3:47332660-47332679 Msa0121490:intron 40.0%
AAACGAATGACGTGTACAGT+CGG + chr1_3:47333092-47333111 Msa0121490:intron 40.0%
CCTCATTTGGGTGCTTAAAT+GGG - chr1_3:47333120-47333139 None:intergenic 40.0%
ACCTCATTTGGGTGCTTAAA+TGG - chr1_3:47333121-47333140 None:intergenic 40.0%
AAATGTAAGCGTACGAAGGT+TGG + chr1_3:47333203-47333222 Msa0121490:intron 40.0%
TCTAGGTTGCACCATACAAA+AGG + chr1_3:47333260-47333279 Msa0121490:intron 40.0%
AAGATTCCAAAGTTAGCCAC+AGG + chr1_3:47333307-47333326 Msa0121490:CDS 40.0%
ATCTTTCCTGTGGCTAACTT+TGG - chr1_3:47333316-47333335 None:intergenic 40.0%
!! TTTAGTGAGTTGATGCACGA+TGG + chr1_3:47333573-47333592 Msa0121490:three_prime_UTR 40.0%
ATTGGAAGAGGAAGGAGGTT+GGG - chr1_3:47325617-47325636 None:intergenic 45.0%
! AGACATGGATTTTGAGCTGG+CGG - chr1_3:47325704-47325723 None:intergenic 45.0%
ACAGGGAAGCGAATAGAGTT+AGG - chr1_3:47325792-47325811 None:intergenic 45.0%
! GAGGGTGTATAAAGGACTAC+TGG - chr1_3:47325856-47325875 None:intergenic 45.0%
! AGTTCGGAGAGGGTGTATAA+AGG - chr1_3:47325864-47325883 None:intergenic 45.0%
TTGTCTAGAGAGTTCGGAGA+GGG - chr1_3:47325874-47325893 None:intergenic 45.0%
TTTGTCTAGAGAGTTCGGAG+AGG - chr1_3:47325875-47325894 None:intergenic 45.0%
TGAGACACATCTCTGTTCAC+CGG - chr1_3:47326074-47326093 None:intergenic 45.0%
TCTTTACTCTTCAGGCACCA+CGG + chr1_3:47326112-47326131 Msa0121490:CDS 45.0%
AAACCATTTGCAGCCTTTCG+AGG + chr1_3:47326582-47326601 Msa0121490:intron 45.0%
!! TTGATTTGGTCTTGTGGCCA+TGG + chr1_3:47327007-47327026 Msa0121490:intron 45.0%
! GGGACACTCTCTTTTTAACG+AGG - chr1_3:47327040-47327059 None:intergenic 45.0%
CATTCACTCTCTATGACCTC+GGG - chr1_3:47328598-47328617 None:intergenic 45.0%
TGATAATTGTGGCAGGGGTA+TGG + chr1_3:47328762-47328781 Msa0121490:intron 45.0%
TATGGCATGACTGAAGCATG+TGG + chr1_3:47328780-47328799 Msa0121490:CDS 45.0%
!! CCTAATTGATTCGGTGGAAG+GGG - chr1_3:47328918-47328937 None:intergenic 45.0%
!! CCCTAATTGATTCGGTGGAA+GGG - chr1_3:47328919-47328938 None:intergenic 45.0%
CCCTTCCACCGAATCAATTA+GGG + chr1_3:47328916-47328935 Msa0121490:CDS 45.0%
CCTTCCACCGAATCAATTAG+GGG + chr1_3:47328917-47328936 Msa0121490:CDS 45.0%
TTAGGGGAAATTTGGCTACG+AGG + chr1_3:47328933-47328952 Msa0121490:CDS 45.0%
CGAGGACCTACTATAATGCA+AGG + chr1_3:47328951-47328970 Msa0121490:CDS 45.0%
CAATCCAGAAGCAACAAAGC+TGG + chr1_3:47329120-47329139 Msa0121490:CDS 45.0%
GATCAAGGTTGGATGAGTAC+AGG + chr1_3:47329151-47329170 Msa0121490:CDS 45.0%
TGGATGAGTACAGGAGATCT+TGG + chr1_3:47329160-47329179 Msa0121490:CDS 45.0%
TCCTGAAATTTCTGATGCCG+GGG + chr1_3:47329545-47329564 Msa0121490:CDS 45.0%
TATGACTTACGGAATCACCC+CGG - chr1_3:47329565-47329584 None:intergenic 45.0%
!! AACCTCGCCAACTTTAGGAT+CGG - chr1_3:47329697-47329716 None:intergenic 45.0%
GGAGTTCAGACCTAATCAGT+GGG + chr1_3:47329912-47329931 Msa0121490:intron 45.0%
! TCAGACCTAATCAGTGGGTT+CGG + chr1_3:47329917-47329936 Msa0121490:intron 45.0%
AAGAGGGAGATTTCACCTTG+AGG + chr1_3:47330180-47330199 Msa0121490:intron 45.0%
!!! TGATCTTTTTGGCTTCCCTC+GGG - chr1_3:47330904-47330923 None:intergenic 45.0%
!!! CTGATCTTTTTGGCTTCCCT+CGG - chr1_3:47330905-47330924 None:intergenic 45.0%
GAAGCCAAAAAGATCAGACG+TGG + chr1_3:47330908-47330927 Msa0121490:intron 45.0%
GTGTGCAATCGTAACGAACT+TGG - chr1_3:47330936-47330955 None:intergenic 45.0%
! GTGCAATGCTACTTGGTTGA+CGG - chr1_3:47331678-47331697 None:intergenic 45.0%
CAGTAGTGTGCAATGCTACT+TGG - chr1_3:47331685-47331704 None:intergenic 45.0%
CAATGGTGCTTAATAGGGGA+AGG - chr1_3:47332571-47332590 None:intergenic 45.0%
CCTTGAGTAATAGGAGAGAG+AGG - chr1_3:47332662-47332681 None:intergenic 45.0%
CCTCTCTCTCCTATTACTCA+AGG + chr1_3:47332659-47332678 Msa0121490:intron 45.0%
TTTGCTTGTAGCATAGCCGT+TGG + chr1_3:47332815-47332834 Msa0121490:intron 45.0%
AACGAATGACGTGTACAGTC+GGG + chr1_3:47333093-47333112 Msa0121490:intron 45.0%
CCCATTTAAGCACCCAAATG+AGG + chr1_3:47333117-47333136 Msa0121490:intron 45.0%
CACAATGCAGCACCTCATTT+GGG - chr1_3:47333132-47333151 None:intergenic 45.0%
TCACAATGCAGCACCTCATT+TGG - chr1_3:47333133-47333152 None:intergenic 45.0%
!! AATGAGGTGCTGCATTGTGA+TGG + chr1_3:47333133-47333152 Msa0121490:intron 45.0%
GTATGGTGCAACCTAGACAA+AGG - chr1_3:47333257-47333276 None:intergenic 45.0%
! ACACGCCGTAACCTTTTGTA+TGG - chr1_3:47333274-47333293 None:intergenic 45.0%
!!! TTTTATTATAATTCATATAA+TGG - chr1_3:47327478-47327497 None:intergenic 5.0%
!!! TTTATAATTGATATTTTTTT+AGG + chr1_3:47329088-47329107 Msa0121490:intron 5.0%
!! GTAATATAAAAATTAAAAAT+TGG - chr1_3:47331744-47331763 None:intergenic 5.0%
!!! ACAATTTTTAATAAATTTAT+CGG + chr1_3:47332338-47332357 Msa0121490:intron 5.0%
!! GTTGATGGGTTGTCTTGGTG+AGG - chr1_3:47325571-47325590 None:intergenic 50.0%
!! GGAAGGTTGATGGGTTGTCT+TGG - chr1_3:47325576-47325595 None:intergenic 50.0%
! GGATCAGTGGGAAGGTTGAT+GGG - chr1_3:47325585-47325604 None:intergenic 50.0%
TTGGAAGAGGAAGGAGGTTG+GGG - chr1_3:47325616-47325635 None:intergenic 50.0%
GATTGGAAGAGGAAGGAGGT+TGG - chr1_3:47325618-47325637 None:intergenic 50.0%
!! AGTGGATTGGAAGAGGAAGG+AGG - chr1_3:47325622-47325641 None:intergenic 50.0%
!! GGAAGTGGATTGGAAGAGGA+AGG - chr1_3:47325625-47325644 None:intergenic 50.0%
TTTGAGCTGGCGGAAGGTAA+GGG - chr1_3:47325694-47325713 None:intergenic 50.0%
! TTTTGAGCTGGCGGAAGGTA+AGG - chr1_3:47325695-47325714 None:intergenic 50.0%
! ATGGATTTTGAGCTGGCGGA+AGG - chr1_3:47325700-47325719 None:intergenic 50.0%
! CGGAGACATGGATTTTGAGC+TGG - chr1_3:47325707-47325726 None:intergenic 50.0%
AAGTAAAGAGTGGGAGAGGG+CGG - chr1_3:47325727-47325746 None:intergenic 50.0%
GCGAAGTAAAGAGTGGGAGA+GGG - chr1_3:47325730-47325749 None:intergenic 50.0%
TCCCACTCTTTACTTCGCCT+CGG + chr1_3:47325732-47325751 Msa0121490:CDS 50.0%
TCCGAGGCGAAGTAAAGAGT+GGG - chr1_3:47325736-47325755 None:intergenic 50.0%
TTCCGAGGCGAAGTAAAGAG+TGG - chr1_3:47325737-47325756 None:intergenic 50.0%
! GGTAGTGGCAATAGCACCTA+TGG - chr1_3:47325835-47325854 None:intergenic 50.0%
AGATGTGTCTCAATCCGACG+TGG + chr1_3:47326082-47326101 Msa0121490:CDS 50.0%
GCGGCGATTCTTTACTCTTC+AGG + chr1_3:47326104-47326123 Msa0121490:CDS 50.0%
CTTTACTCTTCAGGCACCAC+GGG + chr1_3:47326113-47326132 Msa0121490:CDS 50.0%
TTTACTCTTCAGGCACCACG+GGG + chr1_3:47326114-47326133 Msa0121490:CDS 50.0%
TTAATAGCTACGGCGGTAGC+AGG + chr1_3:47326170-47326189 Msa0121490:CDS 50.0%
GCAGTGGATCAAGACCAGAA+CGG + chr1_3:47326194-47326213 Msa0121490:CDS 50.0%
GCATTTGTATGTTGCTCCGC+CGG + chr1_3:47326379-47326398 Msa0121490:CDS 50.0%
TTGATCAGCTCCACCATGAC+CGG - chr1_3:47326401-47326420 None:intergenic 50.0%
! TCATGGTGGAGCTGATCAAG+CGG + chr1_3:47326402-47326421 Msa0121490:CDS 50.0%
! GTTGTCGTCGCTGAAGTATC+TGG + chr1_3:47326448-47326467 Msa0121490:CDS 50.0%
! TCGTCGCTGAAGTATCTGGT+CGG + chr1_3:47326452-47326471 Msa0121490:CDS 50.0%
TCCTCGTGTCAACGTCATTC+AGG + chr1_3:47326526-47326545 Msa0121490:CDS 50.0%
ACCTGAATGACGTTGACACG+AGG - chr1_3:47326530-47326549 None:intergenic 50.0%
ATGCCTCGAAAGGCTGCAAA+TGG - chr1_3:47326588-47326607 None:intergenic 50.0%
GAAAGATGCTCGGCTCTGTT+TGG + chr1_3:47327552-47327571 Msa0121490:intron 50.0%
GTGTTTACCAAACAGACCCG+AGG + chr1_3:47328579-47328598 Msa0121490:intron 50.0%
TCTATGACCTCGGGTCTGTT+TGG - chr1_3:47328589-47328608 None:intergenic 50.0%
CCCCTTCCACCGAATCAATT+AGG + chr1_3:47328915-47328934 Msa0121490:CDS 50.0%
!! CCCCTAATTGATTCGGTGGA+AGG - chr1_3:47328920-47328939 None:intergenic 50.0%
!! ATGGCCAGCTTTGTTGCTTC+TGG - chr1_3:47329127-47329146 None:intergenic 50.0%
AACAAGTCTTCGAGCTCAGC+TGG - chr1_3:47329516-47329535 None:intergenic 50.0%
AGCTGAGCTCGAAGACTTGT+TGG + chr1_3:47329515-47329534 Msa0121490:CDS 50.0%
ACCCCGGCATCAGAAATTTC+AGG - chr1_3:47329549-47329568 None:intergenic 50.0%
AGATCCCCCGATCCTAAAGT+TGG + chr1_3:47329687-47329706 Msa0121490:intron 50.0%
!! ACCTCGCCAACTTTAGGATC+GGG - chr1_3:47329696-47329715 None:intergenic 50.0%
TCCTAAAGTTGGCGAGGTTC+CGG + chr1_3:47329698-47329717 Msa0121490:CDS 50.0%
GAGCGAACAACAAAAGCCAC+CGG - chr1_3:47329720-47329739 None:intergenic 50.0%
GTCTGAACTCCCACTTGTCA+CGG - chr1_3:47329903-47329922 None:intergenic 50.0%
GGGAGTTCAGACCTAATCAG+TGG + chr1_3:47329911-47329930 Msa0121490:intron 50.0%
! CAGACCTAATCAGTGGGTTC+GGG + chr1_3:47329918-47329937 Msa0121490:intron 50.0%
! AGACCTAATCAGTGGGTTCG+GGG + chr1_3:47329919-47329938 Msa0121490:intron 50.0%
! GGACCCACGTCTGATCTTTT+TGG - chr1_3:47330915-47330934 None:intergenic 50.0%
CGGAATCGTGCAAATCTAGC+TGG - chr1_3:47331719-47331738 None:intergenic 50.0%
GAAGGACTCCCCATTGTAGA+TGG - chr1_3:47332553-47332572 None:intergenic 50.0%
ATGTGGGGCCCTTGAGTAAT+AGG - chr1_3:47332671-47332690 None:intergenic 50.0%
!! AGGTGCTGGGTTGAAGAGAT+TGG + chr1_3:47333046-47333065 Msa0121490:intron 50.0%
! GGTGCTGGGTTGAAGAGATT+GGG + chr1_3:47333047-47333066 Msa0121490:intron 50.0%
GGGATCAGTGGGAAGGTTGA+TGG - chr1_3:47325586-47325605 None:intergenic 55.0%
AGAGGTTGGGATCAGTGGGA+AGG - chr1_3:47325593-47325612 None:intergenic 55.0%
AAGGAGGTTGGGGAGAGGTT+GGG - chr1_3:47325606-47325625 None:intergenic 55.0%
!! CGGAGGAAGTGGATTGGAAG+AGG - chr1_3:47325629-47325648 None:intergenic 55.0%
GGATTCACCGGAGTGTGCAT+CGG - chr1_3:47325673-47325692 None:intergenic 55.0%
GCGGAAGGTAAGGGATTCAC+CGG - chr1_3:47325685-47325704 None:intergenic 55.0%
GGCGAAGTAAAGAGTGGGAG+AGG - chr1_3:47325731-47325750 None:intergenic 55.0%
CTTCGCCTCGGAATCAAACG+AGG + chr1_3:47325744-47325763 Msa0121490:CDS 55.0%
TGTGTCTCAATCCGACGTGG+CGG + chr1_3:47326085-47326104 Msa0121490:CDS 55.0%
GTAAAGAATCGCCGCCACGT+CGG - chr1_3:47326099-47326118 None:intergenic 55.0%
GATCAAGACCAGAACGGCGA+GGG + chr1_3:47326200-47326219 Msa0121490:CDS 55.0%
ATCAAGACCAGAACGGCGAG+GGG + chr1_3:47326201-47326220 Msa0121490:CDS 55.0%
TGTGCCAATGCACCACGTGA+TGG + chr1_3:47326244-47326263 Msa0121490:CDS 55.0%
GTGCCAATGCACCACGTGAT+GGG + chr1_3:47326245-47326264 Msa0121490:CDS 55.0%
TGCCAATGCACCACGTGATG+GGG + chr1_3:47326246-47326265 Msa0121490:CDS 55.0%
AACCCCATCACGTGGTGCAT+TGG - chr1_3:47326251-47326270 None:intergenic 55.0%
! AATGCACCACGTGATGGGGT+TGG + chr1_3:47326250-47326269 Msa0121490:CDS 55.0%
GGATAACGTACACGCAGCTG+CGG + chr1_3:47326276-47326295 Msa0121490:CDS 55.0%
! GGAGAAGATTTTTGCGGCGG+TGG + chr1_3:47326340-47326359 Msa0121490:CDS 55.0%
! AGATTTTTGCGGCGGTGGAG+AGG + chr1_3:47326345-47326364 Msa0121490:CDS 55.0%
AAGCGGCGTGACGTTGTTAG+CGG + chr1_3:47326419-47326438 Msa0121490:CDS 55.0%
! TCGCTGAAGTATCTGGTCGG+TGG + chr1_3:47326455-47326474 Msa0121490:CDS 55.0%
!! CTCGCCAACTTTAGGATCGG+GGG - chr1_3:47329694-47329713 None:intergenic 55.0%
!! CCTCGCCAACTTTAGGATCG+GGG - chr1_3:47329695-47329714 None:intergenic 55.0%
ACCGGAACCTCGCCAACTTT+AGG - chr1_3:47329702-47329721 None:intergenic 55.0%
TAAAGTTGGCGAGGTTCCGG+TGG + chr1_3:47329701-47329720 Msa0121490:CDS 55.0%
GGGGAGAGGTTGGGATCAGT+GGG - chr1_3:47325597-47325616 None:intergenic 60.0%
TGGGGAGAGGTTGGGATCAG+TGG - chr1_3:47325598-47325617 None:intergenic 60.0%
GAAGGAGGTTGGGGAGAGGT+TGG - chr1_3:47325607-47325626 None:intergenic 60.0%
AGAGGAAGGAGGTTGGGGAG+AGG - chr1_3:47325611-47325630 None:intergenic 60.0%
CCTCGCCTCGTTTGATTCCG+AGG - chr1_3:47325752-47325771 None:intergenic 60.0%
CCTCGGAATCAAACGAGGCG+AGG + chr1_3:47325749-47325768 Msa0121490:CDS 60.0%
CGGAATCAAACGAGGCGAGG+TGG + chr1_3:47325752-47325771 Msa0121490:CDS 60.0%
GGATCAAGACCAGAACGGCG+AGG + chr1_3:47326199-47326218 Msa0121490:CDS 60.0%
! CACCACGTGATGGGGTTGGT+GGG + chr1_3:47326254-47326273 Msa0121490:CDS 60.0%
!! ACCACGTGATGGGGTTGGTG+GGG + chr1_3:47326255-47326274 Msa0121490:CDS 60.0%
! AGGGAACACGGTGGTGTCGA+TGG + chr1_3:47326301-47326320 Msa0121490:CDS 60.0%
!! GGGAACACGGTGGTGTCGAT+GGG + chr1_3:47326302-47326321 Msa0121490:CDS 60.0%
!! AACACGGTGGTGTCGATGGG+TGG + chr1_3:47326305-47326324 Msa0121490:CDS 60.0%
GTATGTTGCTCCGCCGGTCA+TGG + chr1_3:47326385-47326404 Msa0121490:CDS 60.0%
ATCAGCTCCACCATGACCGG+CGG - chr1_3:47326398-47326417 None:intergenic 60.0%
CCCCGATCCTAAAGTTGGCG+AGG + chr1_3:47329692-47329711 Msa0121490:CDS 60.0%
! GCACCCCGAACCCACTGATT+AGG - chr1_3:47329925-47329944 None:intergenic 60.0%
! ATCAGTGGGTTCGGGGTGCT+TGG + chr1_3:47329926-47329945 Msa0121490:intron 60.0%
!! GAAATGCAGGGTTGGCCCTG+AGG - chr1_3:47329952-47329971 None:intergenic 60.0%
CGGCGACGGAGGAAGTGGAT+TGG - chr1_3:47325635-47325654 None:intergenic 65.0%
ATCGGCGAGGGCGATGGTGT+CGG - chr1_3:47325655-47325674 None:intergenic 65.0%
! ACCGGAGTGTGCATCGGCGA+GGG - chr1_3:47325667-47325686 None:intergenic 65.0%
AGTGGGAGAGGGCGGAGACA+TGG - chr1_3:47325719-47325738 None:intergenic 65.0%
AGGCACCACGGGGAGAAGCA+AGG + chr1_3:47326124-47326143 Msa0121490:CDS 65.0%
GGCACCACGGGGAGAAGCAA+GGG + chr1_3:47326125-47326144 Msa0121490:CDS 65.0%
CACTCCCTTGCTTCTCCCCG+TGG - chr1_3:47326132-47326151 None:intergenic 65.0%
TACGGCGGTAGCAGGAGCAG+TGG + chr1_3:47326178-47326197 Msa0121490:CDS 65.0%
CGTTCTTCCCCTCGCCGTTC+TGG - chr1_3:47326211-47326230 None:intergenic 65.0%
! GCACCACGTGATGGGGTTGG+TGG + chr1_3:47326253-47326272 Msa0121490:CDS 65.0%
TCCCCACCAACCCCATCACG+TGG - chr1_3:47326259-47326278 None:intergenic 65.0%
ACGTACACGCAGCTGCGGAG+AGG + chr1_3:47326281-47326300 Msa0121490:CDS 65.0%
CGTACACGCAGCTGCGGAGA+GGG + chr1_3:47326282-47326301 Msa0121490:CDS 65.0%
GCAGCTGCGGAGAGGGAACA+CGG + chr1_3:47326289-47326308 Msa0121490:CDS 65.0%
TGTTGCTCCGCCGGTCATGG+TGG + chr1_3:47326388-47326407 Msa0121490:CDS 65.0%
!! GTCGGTGGTGCTGCTCCGTT+GGG + chr1_3:47326470-47326489 Msa0121490:CDS 65.0%
!! TCGGTGGTGCTGCTCCGTTG+GGG + chr1_3:47326471-47326490 Msa0121490:CDS 65.0%
! GTTCGGGGTGCTTGGCCTCA+GGG + chr1_3:47329934-47329953 Msa0121490:intron 65.0%
!! GGTGTCGGCGACGGAGGAAG+TGG - chr1_3:47325640-47325659 None:intergenic 70.0%
!! GAGGGCGATGGTGTCGGCGA+CGG - chr1_3:47325649-47325668 None:intergenic 70.0%
! GTGTGCATCGGCGAGGGCGA+TGG - chr1_3:47325661-47325680 None:intergenic 70.0%
GCCCTCGCCGATGCACACTC+CGG + chr1_3:47325663-47325682 Msa0121490:CDS 70.0%
! CACCGGAGTGTGCATCGGCG+AGG - chr1_3:47325668-47325687 None:intergenic 70.0%
GCTGCGGAGAGGGAACACGG+TGG + chr1_3:47326292-47326311 Msa0121490:CDS 70.0%
!! GGTCGGTGGTGCTGCTCCGT+TGG + chr1_3:47326469-47326488 Msa0121490:CDS 70.0%
! GGTTCGGGGTGCTTGGCCTC+AGG + chr1_3:47329933-47329952 Msa0121490:intron 70.0%
!! GGCGATGGTGTCGGCGACGG+AGG - chr1_3:47325646-47325665 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 47325528 47333598 47325528 ID=Msa0121490;Name=Msa0121490
chr1_3 mRNA 47325528 47333598 47325528 ID=Msa0121490-mRNA-1;Parent=Msa0121490;Name=Msa0121490-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0.83|1|1|1|6|211|551
chr1_3 exon 47325528 47326547 47325528 ID=Msa0121490-mRNA-1:exon:14290;Parent=Msa0121490-mRNA-1
chr1_3 exon 47328777 47328972 47328777 ID=Msa0121490-mRNA-1:exon:14291;Parent=Msa0121490-mRNA-1
chr1_3 exon 47329110 47329255 47329110 ID=Msa0121490-mRNA-1:exon:14292;Parent=Msa0121490-mRNA-1
chr1_3 exon 47329507 47329574 47329507 ID=Msa0121490-mRNA-1:exon:14293;Parent=Msa0121490-mRNA-1
chr1_3 exon 47329689 47329791 47329689 ID=Msa0121490-mRNA-1:exon:14294;Parent=Msa0121490-mRNA-1
chr1_3 exon 47333265 47333598 47333265 ID=Msa0121490-mRNA-1:exon:14295;Parent=Msa0121490-mRNA-1
chr1_3 CDS 47325528 47326547 47325528 ID=Msa0121490-mRNA-1:cds;Parent=Msa0121490-mRNA-1
chr1_3 CDS 47328777 47328972 47328777 ID=Msa0121490-mRNA-1:cds;Parent=Msa0121490-mRNA-1
chr1_3 CDS 47329110 47329255 47329110 ID=Msa0121490-mRNA-1:cds;Parent=Msa0121490-mRNA-1
chr1_3 CDS 47329507 47329574 47329507 ID=Msa0121490-mRNA-1:cds;Parent=Msa0121490-mRNA-1
chr1_3 CDS 47329689 47329791 47329689 ID=Msa0121490-mRNA-1:cds;Parent=Msa0121490-mRNA-1
chr1_3 CDS 47333265 47333387 47333265 ID=Msa0121490-mRNA-1:cds;Parent=Msa0121490-mRNA-1
chr1_3 three_prime_UTR 47333388 47333598 47333388 ID=Msa0121490-mRNA-1:three_prime_utr;Parent=Msa0121490-mRNA-1
Gene Sequence

>Msa0121490

ATGGCGAAAAGTTGCTTCAACCTCAAAACAATGACGTATTCCTCACCAAGACAACCCATCAACCTTCCCACTGATCCCAACCTCTCCCCAACCTCCTTCCTCTTCCAATCCACTTCCTCCGTCGCCGACACCATCGCCCTCGCCGATGCACACTCCGGTGAATCCCTTACCTTCCGCCAGCTCAAAATCCATGTCTCCGCCCTCTCCCACTCTTTACTTCGCCTCGGAATCAAACGAGGCGAGGTGGTTTTGCTATTAGCACCTAACTCTATTCGCTTCCCTGTTTGCTTTCTAGCTATAGTTGCCATAGGTGCTATTGCCACTACCAGTAGTCCTTTATACACCCTCTCCGAACTCTCTAGACAAATACATGACTCCAAGCCCAAGCTTGTTATAACTGTATCTGAACTCTTCAAGAAAATTGAAGCATTGACCTTAGGTTTACCATTAATATTCCTTGACGAACCTTCTAAGAAGTTTGGTCCTAGGGTTTCAAACTATGAGGATCTGATCAGAGAGTCATACAATAGTTCCGATGATATTCCGGTGAACAGAGATGTGTCTCAATCCGACGTGGCGGCGATTCTTTACTCTTCAGGCACCACGGGGAGAAGCAAGGGAGTGATGCTAACTCATAAAAACTTAATAGCTACGGCGGTAGCAGGAGCAGTGGATCAAGACCAGAACGGCGAGGGGAAGAACGTGTTTGTATGTTTTGTGCCAATGCACCACGTGATGGGGTTGGTGGGGATAACGTACACGCAGCTGCGGAGAGGGAACACGGTGGTGTCGATGGGTGGTAGATTTGATTTGGAGAAGATTTTTGCGGCGGTGGAGAGGTTTAAAGTGACGCATTTGTATGTTGCTCCGCCGGTCATGGTGGAGCTGATCAAGCGGCGTGACGTTGTTAGCGGTTACGAGTTGTCGTCGCTGAAGTATCTGGTCGGTGGTGCTGCTCCGTTGGGGAAAGATTTGATGCAAGAATGTATTAAGATTCTTCCTCGTGTCAACGTCATTCAGGGGTATGGCATGACTGAAGCATGTGGACTTGTTTCCATAGAAAATCCAAAGGAAGGAAATCTCCTTTCAGTTTCTGGTTCAACTGGAACACTAATTCCAAGTGTAGAATCTCGTATAGTTAATTTGGCAACATTGAAGCCCCTTCCACCGAATCAATTAGGGGAAATTTGGCTACGAGGACCTACTATAATGCAAGGATACTTTAACAATCCAGAAGCAACAAAGCTGGCCATTAATGATCAAGGTTGGATGAGTACAGGAGATCTTGGATATTTTGATGAAAAGGGGCAACTATTTGTTGTGGATCGAATAAAAGAGCTCATCAAATGTAGTGGTTATCAAGTCGCGCCAGCTGAGCTCGAAGACTTGTTGGTTTCTCATCCTGAAATTTCTGATGCCGGGGTGATTCCATCCCCCGATCCTAAAGTTGGCGAGGTTCCGGTGGCTTTTGTTGTTCGCTCGCCCAATAGCTCCATAACCAAAGAAGATATTCAAAAGTTTGTAGCAAAACAGGTTGCACCATACAAAAGGTTACGGCGTGTGACTTTTTTAGAGAAGATTCCAAAGTTAGCCACAGGAAAGATCTTAAGAAAGGATCTCGTAAGTTTTGATCGACAAAATATATCAAAGTTATAG
Protein sequence

>Msa0121490

MAKSCFNLKTMTYSSPRQPINLPTDPNLSPTSFLFQSTSSVADTIALADAHSGESLTFRQLKIHVSALSHSLLRLGIKRGEVVLLLAPNSIRFPVCFLAIVAIGAIATTSSPLYTLSELSRQIHDSKPKLVITVSELFKKIEALTLGLPLIFLDEPSKKFGPRVSNYEDLIRESYNSSDDIPVNRDVSQSDVAAILYSSGTTGRSKGVMLTHKNLIATAVAGAVDQDQNGEGKNVFVCFVPMHHVMGLVGITYTQLRRGNTVVSMGGRFDLEKIFAAVERFKVTHLYVAPPVMVELIKRRDVVSGYELSSLKYLVGGAAPLGKDLMQECIKILPRVNVIQGYGMTEACGLVSIENPKEGNLLSVSGSTGTLIPSVESRIVNLATLKPLPPNQLGEIWLRGPTIMQGYFNNPEATKLAINDQGWMSTGDLGYFDEKGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDPKVGEVPVAFVVRSPNSSITKEDIQKFVAKQVAPYKRLRRVTFLEKIPKLATGKILRKDLVSFDRQNISKL*