AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0121470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121470 MtrunA17_Chr1g0180541 94.737 551 29 0 1 551 1 551 0.0 1048
Msa0121470 MtrunA17_Chr1g0180551 77.061 558 118 3 1 551 70 624 0.0 852
Msa0121470 MtrunA17_Chr4g0028411 57.169 537 223 6 13 548 12 542 0.0 614
Msa0121470 MtrunA17_Chr2g0327341 54.291 536 237 6 13 548 12 539 0.0 586
Msa0121470 MtrunA17_Chr1g0157401 42.491 546 298 7 3 541 17 553 1.14e-146 433
Msa0121470 MtrunA17_Chr1g0197391 41.682 559 304 12 3 551 24 570 1.03e-132 398
Msa0121470 MtrunA17_Chr5g0409771 39.560 546 305 9 4 540 18 547 1.79e-130 392
Msa0121470 MtrunA17_Chr8g0353341 42.383 512 273 9 13 511 24 526 8.90e-130 389
Msa0121470 MtrunA17_Chr4g0039791 40.665 541 304 7 6 540 24 553 5.10e-128 385
Msa0121470 MtrunA17_Chr1g0186071 44.106 526 258 13 27 542 51 550 1.03e-125 380
Msa0121470 MtrunA17_Chr5g0409791 39.744 546 298 8 13 540 28 560 8.01e-125 377
Msa0121470 MtrunA17_Chr5g0395431 40.037 537 286 11 21 540 62 579 2.12e-120 367
Msa0121470 MtrunA17_Chr4g0072561 40.643 529 297 10 20 542 25 542 4.61e-119 362
Msa0121470 MtrunA17_Chr3g0116271 40.762 525 270 13 32 541 53 551 6.21e-119 362
Msa0121470 MtrunA17_Chr3g0116251 39.847 522 276 13 32 541 54 549 8.98e-117 357
Msa0121470 MtrunA17_Chr4g0000461 40.541 518 287 11 32 540 29 534 2.01e-114 350
Msa0121470 MtrunA17_Chr3g0102411 33.769 536 340 9 6 538 8 531 1.01e-102 320
Msa0121470 MtrunA17_Chr2g0334131 48.000 275 140 3 268 540 3 276 8.03e-78 246
Msa0121470 MtrunA17_Chr1g0157431 34.648 355 219 6 3 351 17 364 1.68e-59 206
Msa0121470 MtrunA17_Chr6g0471921 29.675 492 319 13 56 538 32 505 4.85e-49 177
Msa0121470 MtrunA17_Chr3g0109731 28.154 547 345 18 28 540 14 546 1.30e-47 174
Msa0121470 MtrunA17_Chr5g0396331 27.820 532 338 18 28 534 14 524 4.16e-41 155
Msa0121470 MtrunA17_Chr4g0028451 62.617 107 31 1 406 512 10 107 1.03e-39 140
Msa0121470 MtrunA17_Chr2g0301671 26.538 569 369 17 19 551 11 566 3.17e-39 150
Msa0121470 MtrunA17_Chr5g0396311 27.221 529 347 14 28 534 14 526 3.02e-37 145
Msa0121470 MtrunA17_Chr5g0433231 26.750 557 335 18 28 540 14 541 6.87e-37 144
Msa0121470 MtrunA17_Chr8g0370701 27.106 546 334 17 28 537 56 573 2.62e-36 143
Msa0121470 MtrunA17_Chr5g0433241 26.259 556 352 16 16 537 6 537 7.21e-36 141
Msa0121470 MtrunA17_Chr2g0292471 25.758 528 342 16 57 541 29 549 3.70e-35 139
Msa0121470 MtrunA17_Chr4g0068151 25.954 524 341 17 51 540 41 551 9.33e-35 138
Msa0121470 MtrunA17_Chr5g0433221 25.714 560 337 18 28 540 14 541 1.93e-32 131
Msa0121470 MtrunA17_Chr5g0406681 24.624 532 365 15 28 537 41 558 1.44e-31 129
Msa0121470 MtrunA17_Chr6g0471311 25.045 551 354 16 28 540 14 543 2.10e-30 125
Msa0121470 MtrunA17_Chr1g0205711 27.557 479 252 22 56 465 116 568 7.95e-30 124
Msa0121470 MtrunA17_Chr8g0370731 26.582 395 242 14 166 537 115 484 4.78e-28 117
Msa0121470 MtrunA17_Chr8g0388081 25.691 362 202 15 158 466 132 479 2.37e-26 113
Msa0121470 MtrunA17_Chr7g0270221 29.248 359 197 14 191 502 182 530 3.91e-25 109
Msa0121470 MtrunA17_Chr5g0396691 23.819 487 286 18 57 475 80 549 5.03e-25 109
Msa0121470 MtrunA17_Chr2g0329161 27.361 413 237 16 176 537 659 1059 1.97e-24 108
Msa0121470 MtrunA17_Chr5g0396711 25.606 371 209 14 158 475 193 549 2.20e-24 107
Msa0121470 MtrunA17_Chr1g0194371 28.165 387 212 16 191 526 221 592 1.48e-23 105
Msa0121470 MtrunA17_Chr1g0162621 23.596 534 308 25 20 475 37 548 7.75e-23 102
Msa0121470 MtrunA17_Chr4g0004841 27.200 250 165 7 302 540 89 332 1.23e-22 99.4
Msa0121470 MtrunA17_Chr4g0004101 26.891 238 161 6 310 540 92 323 1.27e-22 99.0
Msa0121470 MtrunA17_Chr1g0160041 27.114 402 203 18 182 515 240 619 1.30e-22 102
Msa0121470 MtrunA17_Chr2g0334121 29.524 210 143 3 1 208 1 207 1.64e-21 92.8
Msa0121470 MtrunA17_Chr4g0034181 23.695 498 289 23 49 475 69 546 3.14e-21 97.8
Msa0121470 MtrunA17_Chr4g0033141 26.299 308 194 11 191 470 675 977 3.25e-20 95.5
Msa0121470 MtrunA17_Chr8g0377991 33.679 193 103 5 316 497 460 638 1.23e-18 89.7
Msa0121470 MtrunA17_Chr8g0377991 30.244 205 117 7 37 216 88 291 4.71e-11 65.5
Msa0121470 MtrunA17_Chr3g0121951 30.964 197 111 5 316 501 453 635 3.89e-16 81.6
Msa0121470 MtrunA17_Chr3g0121931 30.435 184 109 4 316 488 457 632 2.39e-15 79.3
Msa0121470 MtrunA17_Chr3g0121931 26.027 292 169 11 37 297 86 361 9.78e-14 74.3
Msa0121470 MtrunA17_Chr2g0307631 23.592 568 369 21 20 550 180 719 1.11e-13 73.9
Msa0121470 MtrunA17_Chr3g0124631 28.902 173 104 7 311 472 423 587 2.12e-12 70.1
Msa0121470 MtrunA17_Chr3g0120731 29.858 211 122 11 298 497 444 639 3.36e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121470 AT4G05160.1 55.596 545 230 7 1 541 1 537 0.0 596
Msa0121470 AT1G20510.1 43.964 555 292 9 2 551 6 546 8.31e-153 449
Msa0121470 AT1G20480.1 42.805 549 288 12 3 540 24 557 3.95e-144 427
Msa0121470 AT4G19010.1 41.621 543 296 11 6 540 25 554 1.66e-137 410
Msa0121470 AT1G20500.1 42.804 542 296 8 3 541 13 543 7.88e-136 405
Msa0121470 AT5G38120.1 41.379 551 294 12 3 543 14 545 2.08e-133 399
Msa0121470 AT1G65060.1 41.346 520 292 8 26 540 45 556 2.41e-125 379
Msa0121470 AT1G20510.2 42.204 481 260 8 2 477 6 473 1.04e-122 369
Msa0121470 AT5G63380.1 39.469 565 308 14 4 551 15 562 6.32e-122 370
Msa0121470 AT5G38120.3 40.385 520 281 12 3 512 14 514 1.56e-117 357
Msa0121470 AT3G21240.1 40.267 524 294 9 26 540 33 546 5.97e-116 355
Msa0121470 AT3G21230.1 40.076 529 296 10 26 540 39 560 7.63e-110 339
Msa0121470 AT1G20510.3 40.523 459 255 8 2 455 6 451 6.63e-109 333
Msa0121470 AT1G51680.1 39.006 523 307 9 26 540 35 553 2.34e-106 330
Msa0121470 AT5G38120.4 40.619 485 259 12 3 477 14 479 8.84e-106 326
Msa0121470 AT5G38120.2 40.619 485 259 12 3 477 14 479 8.84e-106 326
Msa0121470 AT1G62940.1 35.564 523 325 8 21 540 19 532 1.03e-100 315
Msa0121470 AT3G21230.3 38.922 501 285 10 26 512 39 532 6.36e-97 305
Msa0121470 AT1G51680.3 37.778 495 296 9 26 512 35 525 5.20e-94 297
Msa0121470 AT3G21240.2 38.261 460 265 9 26 476 33 482 3.25e-90 286
Msa0121470 AT3G21240.3 38.261 460 265 9 26 476 33 482 3.25e-90 286
Msa0121470 AT1G65060.2 37.529 437 260 8 26 457 45 473 6.68e-88 280
Msa0121470 AT3G21230.2 38.280 465 266 10 26 476 39 496 6.19e-85 273
Msa0121470 AT1G20490.2 39.070 430 240 11 3 424 13 428 6.13e-82 263
Msa0121470 AT1G20490.1 39.070 430 240 11 3 424 13 428 6.13e-82 263
Msa0121470 AT1G51680.2 37.037 459 277 9 26 476 35 489 9.23e-81 261
Msa0121470 AT3G48990.1 30.786 471 300 10 76 538 52 504 7.74e-51 182
Msa0121470 AT3G21230.4 34.761 397 234 11 26 406 39 426 3.87e-49 176
Msa0121470 AT1G65880.1 27.076 554 345 19 28 540 14 549 1.88e-45 169
Msa0121470 AT1G77240.1 28.022 546 347 19 22 537 5 534 3.87e-44 164
Msa0121470 AT1G65890.1 25.801 562 364 18 28 548 14 563 4.31e-44 165
Msa0121470 AT1G21530.2 27.469 557 340 20 22 537 5 538 9.11e-43 161
Msa0121470 AT1G21530.1 27.949 551 343 21 22 537 5 536 1.41e-42 160
Msa0121470 AT1G66120.1 26.248 541 358 17 28 540 14 541 4.07e-42 159
Msa0121470 AT1G21540.1 28.102 548 349 17 22 537 5 539 5.73e-42 159
Msa0121470 AT1G76290.1 27.788 529 355 15 28 541 14 530 6.41e-42 158
Msa0121470 AT1G20560.1 26.071 560 359 15 28 551 16 556 2.39e-41 157
Msa0121470 AT1G30520.2 25.981 535 344 16 46 540 23 545 3.20e-39 151
Msa0121470 AT1G30520.1 25.981 535 344 16 46 540 23 545 3.20e-39 151
Msa0121470 AT5G16370.1 26.802 541 349 18 26 537 12 534 1.85e-37 146
Msa0121470 AT5G16340.1 26.580 538 354 16 26 537 12 534 4.58e-37 145
Msa0121470 AT1G68270.1 25.714 560 337 18 28 548 14 533 7.47e-36 141
Msa0121470 AT3G16170.1 25.618 566 324 21 35 540 72 600 1.59e-33 135
Msa0121470 AT1G20560.2 26.977 430 269 13 150 551 66 478 1.79e-33 133
Msa0121470 AT1G75960.1 27.072 543 337 20 33 540 19 537 2.73e-33 134
Msa0121470 AT2G17650.1 26.607 560 346 21 17 535 53 588 3.19e-31 128
Msa0121470 AT1G30520.3 25.166 453 298 14 46 472 23 460 5.25e-31 126
Msa0121470 AT1G30520.4 25.166 453 298 14 46 472 23 460 5.25e-31 126
Msa0121470 AT3G16910.1 22.868 551 365 16 31 540 23 554 3.03e-30 125
Msa0121470 AT5G27600.1 25.239 523 310 21 9 463 60 569 1.24e-27 118
Msa0121470 AT5G36880.2 23.464 537 360 15 55 551 197 722 1.42e-27 118
Msa0121470 AT5G36880.6 23.464 537 360 15 55 551 147 672 1.52e-27 117
Msa0121470 AT5G36880.3 23.464 537 360 15 55 551 147 672 1.52e-27 117
Msa0121470 AT5G36880.5 23.464 537 360 15 55 551 147 672 1.52e-27 117
Msa0121470 AT5G36880.1 23.464 537 360 15 55 551 147 672 1.52e-27 117
Msa0121470 AT4G23850.1 24.421 475 274 18 57 463 81 538 7.16e-26 112
Msa0121470 AT4G11030.1 24.000 475 276 17 57 463 81 538 7.16e-26 112
Msa0121470 AT2G47240.1 29.882 338 173 13 191 475 221 547 8.21e-26 112
Msa0121470 AT2G47240.2 29.882 338 173 13 191 475 221 547 8.21e-26 112
Msa0121470 AT2G47240.3 29.882 338 173 13 191 475 221 547 8.21e-26 112
Msa0121470 AT3G05970.1 29.907 321 164 13 191 463 262 569 1.00e-25 112
Msa0121470 AT2G47240.4 29.882 338 173 13 191 475 162 488 1.01e-25 112
Msa0121470 AT1G64400.1 24.699 498 273 23 47 467 69 541 3.26e-24 107
Msa0121470 AT1G49430.1 26.790 377 192 15 189 496 222 583 5.43e-24 106
Msa0121470 AT5G36880.4 23.747 459 302 14 55 476 147 594 9.11e-23 102
Msa0121470 AT3G23790.1 30.876 217 130 5 282 486 423 631 4.49e-18 88.6
Msa0121470 AT4G14070.1 29.545 220 128 7 316 522 474 679 4.75e-15 79.0
Msa0121470 AT4G14070.1 31.841 201 115 7 37 216 106 305 2.18e-14 76.6
Msa0121470 AT1G77590.2 30.000 220 116 9 264 472 243 435 7.48e-14 74.7
Msa0121470 AT1G77590.1 30.000 220 116 9 264 472 389 581 9.76e-14 74.7
Msa0121470 AT2G04350.2 30.288 208 119 10 298 494 437 629 2.01e-11 67.4
Msa0121470 AT2G04350.1 30.288 208 119 10 298 494 437 629 2.01e-11 67.4

Find 179 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATCTCCTTTCAGTTTC+TGG 0.087977 1_3:+47288351 Msa0121470:CDS
CGAATCAATTAGGGGAAATT+TGG 0.173843 1_3:+47288445 Msa0121470:CDS
ATGGCCAGCTTTGTTGCTTC+TGG 0.208360 1_3:-47288644 None:intergenic
TTCTTTGGTTATGGAGCTAT+TGG 0.212877 1_3:-47289262 None:intergenic
TTGAATATCTTCTTTGGTTA+TGG 0.218799 1_3:-47289271 None:intergenic
CATCCAACCTTGATCATTAA+TGG 0.237817 1_3:-47288663 None:intergenic
CCCCTTCCACCGAATCAATT+AGG 0.246857 1_3:+47288435 Msa0121470:CDS
ACAAAATATATCAAAGTTAT+AGG 0.248698 1_3:+47292886 Msa0121470:CDS
CGTTCTTCCCCTCGCCGTTC+TGG 0.263674 1_3:-47285728 None:intergenic
AGAATCTCGTATAGTTAATT+TGG 0.285473 1_3:+47288401 Msa0121470:CDS
GGGATCAGTGGGAAGGTTGA+TGG 0.289930 1_3:-47285103 None:intergenic
GAAGGAGGTTGGGGAGAGGT+TGG 0.300719 1_3:-47285124 None:intergenic
CCCTTCCACCGAATCAATTA+GGG 0.305642 1_3:+47288436 Msa0121470:CDS
GTCGGTGGTGCTGCTCCGTT+GGG 0.310434 1_3:+47285990 Msa0121470:CDS
GAAAGGAGATTTCCTTCCTT+TGG 0.316300 1_3:-47288342 None:intergenic
CTTTCAGTTTCTGGTTCAAC+TGG 0.316511 1_3:+47288360 Msa0121470:CDS
GCGGCGATTCTTTACTCTTC+AGG 0.334954 1_3:+47285624 Msa0121470:CDS
GACGAACCTTCTAAGAAGTT+TGG 0.343303 1_3:+47285507 Msa0121470:CDS
TCCTAAAGTTGGCGAGGTTC+CGG 0.343675 1_3:+47289218 Msa0121470:CDS
TCCTCGTGTCAACGTCATTC+AGG 0.352296 1_3:+47286046 Msa0121470:CDS
TGGGGAGAGGTTGGGATCAG+TGG 0.354004 1_3:-47285115 None:intergenic
TCAAAAGTTTGTAGCAAAAC+AGG 0.356225 1_3:+47289290 Msa0121470:CDS
ATTGGAAGAGGAAGGAGGTT+GGG 0.364249 1_3:-47285134 None:intergenic
CAATAGTTCCGATGATATTC+CGG 0.364859 1_3:+47285572 Msa0121470:CDS
ATCTTTCCTGTGGCTAACTT+TGG 0.368563 1_3:-47292833 None:intergenic
CTAGGACCAAACTTCTTAGA+AGG 0.371426 1_3:-47285513 None:intergenic
GGTTCGTCAAGGAATATTAA+TGG 0.383824 1_3:-47285492 None:intergenic
TTGGAAGAGGAAGGAGGTTG+GGG 0.386791 1_3:-47285133 None:intergenic
GATTGGAAGAGGAAGGAGGT+TGG 0.390261 1_3:-47285135 None:intergenic
GGATCAGTGGGAAGGTTGAT+GGG 0.391325 1_3:-47285102 None:intergenic
ACCGGAACCTCGCCAACTTT+AGG 0.393255 1_3:-47289219 None:intergenic
AGTTATAACAAGCTTGGGCT+TGG 0.394365 1_3:-47285424 None:intergenic
GGTCGGTGGTGCTGCTCCGT+TGG 0.394416 1_3:+47285989 Msa0121470:CDS
GATGGGTGGTAGATTTGATT+TGG 0.396633 1_3:+47285839 Msa0121470:CDS
CAAATTTCCCCTAATTGATT+CGG 0.406286 1_3:-47288444 None:intergenic
GATACAGTTATAACAAGCTT+GGG 0.409402 1_3:-47285429 None:intergenic
AAGGAGGTTGGGGAGAGGTT+GGG 0.413927 1_3:-47285123 None:intergenic
AAAATTGAAGCATTGACCTT+AGG 0.414520 1_3:+47285465 Msa0121470:CDS
CTTCTAAGAAGTTTGGTCCT+AGG 0.415331 1_3:+47285514 Msa0121470:CDS
TTCTAAGAAGTTTGGTCCTA+GGG 0.419318 1_3:+47285515 Msa0121470:CDS
AGCTGAGCTCGAAGACTTGT+TGG 0.421895 1_3:+47289035 Msa0121470:CDS
ATCTTACCTTGCATTATAGT+AGG 0.424026 1_3:-47288477 None:intergenic
AGTTCGGAGAGGGTGTATAA+AGG 0.424090 1_3:-47285381 None:intergenic
ACCTCGCCAACTTTAGGATC+GGG 0.424551 1_3:-47289213 None:intergenic
AGAGGAAGGAGGTTGGGGAG+AGG 0.427569 1_3:-47285128 None:intergenic
CATCCTGAAATTTCTGATGC+CGG 0.429620 1_3:+47289063 Msa0121470:CDS
ATCCTGAAATTTCTGATGCC+GGG 0.430897 1_3:+47289064 Msa0121470:CDS
GGAAGGTTGATGGGTTGTCT+TGG 0.442697 1_3:-47285093 None:intergenic
AACAAGTCTTCGAGCTCAGC+TGG 0.442961 1_3:-47289033 None:intergenic
ACAGGGAAGCGAATAGAGTT+AGG 0.445164 1_3:-47285309 None:intergenic
TGGATGAGTACAGGAGATCT+TGG 0.447208 1_3:+47288680 Msa0121470:CDS
GGTGTCGGCGACGGAGGAAG+TGG 0.448068 1_3:-47285157 None:intergenic
ACTATAGCTAGAAAGCAAAC+AGG 0.452979 1_3:-47285327 None:intergenic
GTTGTCGTCGCTGAAGTATC+TGG 0.455606 1_3:+47285968 Msa0121470:CDS
GTGCCAATGCACCACGTGAT+GGG 0.455758 1_3:+47285765 Msa0121470:CDS
CCCTAATTGATTCGGTGGAA+GGG 0.455832 1_3:-47288436 None:intergenic
ATGTATTTGTCTAGAGAGTT+CGG 0.458312 1_3:-47285397 None:intergenic
ACCCCGGCATCAGAAATTTC+AGG 0.460523 1_3:-47289066 None:intergenic
TCTTTGGTTATGGAGCTATT+GGG 0.462727 1_3:-47289261 None:intergenic
CTTTACTCTTCAGGCACCAC+GGG 0.466001 1_3:+47285633 Msa0121470:CDS
AGATACAGTTATAACAAGCT+TGG 0.467152 1_3:-47285430 None:intergenic
AGGGAACACGGTGGTGTCGA+TGG 0.467282 1_3:+47285821 Msa0121470:CDS
CCCCTAATTGATTCGGTGGA+AGG 0.472230 1_3:-47288437 None:intergenic
GCACCACGTGATGGGGTTGG+TGG 0.479385 1_3:+47285773 Msa0121470:CDS
TTAATAGCTACGGCGGTAGC+AGG 0.481078 1_3:+47285690 Msa0121470:CDS
CCTAATTGATTCGGTGGAAG+GGG 0.482338 1_3:-47288435 None:intergenic
TCCTAGGGTTTCAAACTATG+AGG 0.486711 1_3:+47285530 Msa0121470:CDS
TCTAGGTTGCACCATACAAA+AGG 0.487148 1_3:+47292780 Msa0121470:intron
GGGGAGAGGTTGGGATCAGT+GGG 0.489626 1_3:-47285114 None:intergenic
GAGGGCGATGGTGTCGGCGA+CGG 0.489980 1_3:-47285166 None:intergenic
GTGTGCATCGGCGAGGGCGA+TGG 0.490776 1_3:-47285178 None:intergenic
CACAGGAAAGATCTTAAGAA+AGG 0.494399 1_3:+47292844 Msa0121470:CDS
GTATGTTGCTCCGCCGGTCA+TGG 0.494857 1_3:+47285905 Msa0121470:CDS
AACCCCATCACGTGGTGCAT+TGG 0.494883 1_3:-47285768 None:intergenic
TTATAGGTATATTAATGCAT+TGG 0.495428 1_3:+47292902 Msa0121470:exon
GGAAGTGGATTGGAAGAGGA+AGG 0.495586 1_3:-47285142 None:intergenic
GGCGAAGTAAAGAGTGGGAG+AGG 0.499376 1_3:-47285248 None:intergenic
TCCCACTCTTTACTTCGCCT+CGG 0.499620 1_3:+47285252 Msa0121470:CDS
GGCGATGGTGTCGGCGACGG+AGG 0.503668 1_3:-47285163 None:intergenic
ACTATACGAGATTCTACACT+TGG 0.511285 1_3:-47288393 None:intergenic
TTGATCAGCTCCACCATGAC+CGG 0.514935 1_3:-47285918 None:intergenic
AGGCACCACGGGGAGAAGCA+AGG 0.516589 1_3:+47285644 Msa0121470:CDS
CACCACGTGATGGGGTTGGT+GGG 0.516768 1_3:+47285774 Msa0121470:CDS
TTTCTAGCTATAGTTGCCAT+AGG 0.516953 1_3:+47285336 Msa0121470:CDS
TGATAATTGTGGCAGGGGTA+TGG 0.519509 1_3:+47288282 Msa0121470:intron
TGTGCCAATGCACCACGTGA+TGG 0.525181 1_3:+47285764 Msa0121470:CDS
CGGAGGAAGTGGATTGGAAG+AGG 0.525231 1_3:-47285146 None:intergenic
GGGAACACGGTGGTGTCGAT+GGG 0.526130 1_3:+47285822 Msa0121470:CDS
GGTAGTGGCAATAGCACCTA+TGG 0.527664 1_3:-47285352 None:intergenic
AAGCTGGCCATTAATGATCA+AGG 0.529120 1_3:+47288656 Msa0121470:CDS
AGTGGGAGAGGGCGGAGACA+TGG 0.531913 1_3:-47285236 None:intergenic
GAGCGAACAACAAAAGCCAC+CGG 0.532066 1_3:-47289237 None:intergenic
CACTCCCTTGCTTCTCCCCG+TGG 0.532440 1_3:-47285649 None:intergenic
AAGATTCCAAAGTTAGCCAC+AGG 0.534845 1_3:+47292827 Msa0121470:CDS
GATCAAGGTTGGATGAGTAC+AGG 0.538951 1_3:+47288671 Msa0121470:CDS
CTTTCTTAAGATCTTTCCTG+TGG 0.540080 1_3:-47292843 None:intergenic
ACCGGAGTGTGCATCGGCGA+GGG 0.540521 1_3:-47285184 None:intergenic
GGCACCACGGGGAGAAGCAA+GGG 0.541024 1_3:+47285645 Msa0121470:CDS
CTCACTAAAATTTAAATCGA+AGG 0.541360 1_3:-47293079 None:intergenic
CGTACACGCAGCTGCGGAGA+GGG 0.543322 1_3:+47285802 Msa0121470:CDS
TTTGAGCTGGCGGAAGGTAA+GGG 0.545357 1_3:-47285211 None:intergenic
TTGCACCATACAAAAGGTTA+CGG 0.545634 1_3:+47292786 Msa0121470:CDS
AGTGGATTGGAAGAGGAAGG+AGG 0.546009 1_3:-47285139 None:intergenic
CTGCTTCATCTCTATATATG+TGG 0.546443 1_3:-47292941 None:intergenic
GAGGGTGTATAAAGGACTAC+TGG 0.547287 1_3:-47285373 None:intergenic
TGCATCAAATCTTTCCCCAA+CGG 0.547929 1_3:-47286005 None:intergenic
ATCGGCGAGGGCGATGGTGT+CGG 0.551329 1_3:-47285172 None:intergenic
GATCAAGACCAGAACGGCGA+GGG 0.551357 1_3:+47285720 Msa0121470:CDS
CGGCGACGGAGGAAGTGGAT+TGG 0.551457 1_3:-47285152 None:intergenic
AACCTCGCCAACTTTAGGAT+CGG 0.552992 1_3:-47289214 None:intergenic
ACCACGTGATGGGGTTGGTG+GGG 0.553119 1_3:+47285775 Msa0121470:CDS
CAATCCAGAAGCAACAAAGC+TGG 0.553529 1_3:+47288640 Msa0121470:CDS
ATTTCCCCTAATTGATTCGG+TGG 0.554045 1_3:-47288441 None:intergenic
GCATTTGTATGTTGCTCCGC+CGG 0.556295 1_3:+47285899 Msa0121470:CDS
CCTCGCCTCGTTTGATTCCG+AGG 0.560366 1_3:-47285269 None:intergenic
AAGCGGCGTGACGTTGTTAG+CGG 0.562638 1_3:+47285939 Msa0121470:CDS
TCCATAGAAAATCCAAAGGA+AGG 0.564186 1_3:+47288330 Msa0121470:CDS
GAATATTAATGGTAAACCTA+AGG 0.564328 1_3:-47285481 None:intergenic
AGAGGTTGGGATCAGTGGGA+AGG 0.565746 1_3:-47285110 None:intergenic
GCGGAAGGTAAGGGATTCAC+CGG 0.567196 1_3:-47285202 None:intergenic
AAAGGGGCAACTATTTGTTG+TGG 0.569879 1_3:+47288715 Msa0121470:CDS
TCCTGAAATTTCTGATGCCG+GGG 0.576260 1_3:+47289065 Msa0121470:CDS
TGAGACACATCTCTGTTCAC+CGG 0.578410 1_3:-47285591 None:intergenic
CACCGGAGTGTGCATCGGCG+AGG 0.584029 1_3:-47285185 None:intergenic
AAGTAAAGAGTGGGAGAGGG+CGG 0.587725 1_3:-47285244 None:intergenic
GTATAAAGGACTACTGGTAG+TGG 0.589136 1_3:-47285367 None:intergenic
TTGTCTAGAGAGTTCGGAGA+GGG 0.593263 1_3:-47285391 None:intergenic
ATCAGCTCCACCATGACCGG+CGG 0.593576 1_3:-47285915 None:intergenic
GTTGATGGGTTGTCTTGGTG+AGG 0.596352 1_3:-47285088 None:intergenic
TCTTTACTCTTCAGGCACCA+CGG 0.599552 1_3:+47285632 Msa0121470:CDS
TCTGTTCACCGGAATATCAT+CGG 0.600597 1_3:-47285580 None:intergenic
GCCCTCGCCGATGCACACTC+CGG 0.604791 1_3:+47285183 Msa0121470:CDS
CTATAGCTAGAAAGCAAACA+GGG 0.605051 1_3:-47285326 None:intergenic
GGATTCACCGGAGTGTGCAT+CGG 0.607336 1_3:-47285190 None:intergenic
CAGTTGAACCAGAAACTGAA+AGG 0.607835 1_3:-47288359 None:intergenic
TAAAGTTGGCGAGGTTCCGG+TGG 0.609371 1_3:+47289221 Msa0121470:CDS
TGCCAATGCACCACGTGATG+GGG 0.610925 1_3:+47285766 Msa0121470:CDS
TGGCCATTAATGATCAAGGT+TGG 0.611232 1_3:+47288660 Msa0121470:CDS
AAAGAGCTCATCAAATGTAG+TGG 0.612772 1_3:+47288746 Msa0121470:CDS
AACACGGTGGTGTCGATGGG+TGG 0.612802 1_3:+47285825 Msa0121470:CDS
GCAGCTGCGGAGAGGGAACA+CGG 0.617058 1_3:+47285809 Msa0121470:CDS
CTCGCCAACTTTAGGATCGG+GGG 0.619961 1_3:-47289211 None:intergenic
AATGCACCACGTGATGGGGT+TGG 0.620818 1_3:+47285770 Msa0121470:CDS
TCCGAGGCGAAGTAAAGAGT+GGG 0.622000 1_3:-47285253 None:intergenic
CCTCGGAATCAAACGAGGCG+AGG 0.622728 1_3:+47285269 Msa0121470:CDS
CCCCGATCCTAAAGTTGGCG+AGG 0.624439 1_3:+47289212 Msa0121470:CDS
TCATGGTGGAGCTGATCAAG+CGG 0.626759 1_3:+47285922 Msa0121470:CDS
GCGAAGTAAAGAGTGGGAGA+GGG 0.628346 1_3:-47285247 None:intergenic
TCGTCGCTGAAGTATCTGGT+CGG 0.630836 1_3:+47285972 Msa0121470:CDS
CCTCGCCAACTTTAGGATCG+GGG 0.636923 1_3:-47289212 None:intergenic
TTTAGTGAGTTGATGCACGA+TGG 0.637062 1_3:+47293093 Msa0121470:three_prime_UTR
ACTTCTTAGAAGGTTCGTCA+AGG 0.637951 1_3:-47285503 None:intergenic
TTCCGAGGCGAAGTAAAGAG+TGG 0.638040 1_3:-47285254 None:intergenic
CTTCGCCTCGGAATCAAACG+AGG 0.638276 1_3:+47285264 Msa0121470:CDS
TGTTGCTCCGCCGGTCATGG+TGG 0.639710 1_3:+47285908 Msa0121470:CDS
TCCTCATAGTTTGAAACCCT+AGG 0.639843 1_3:-47285531 None:intergenic
CGGAATCAAACGAGGCGAGG+TGG 0.640367 1_3:+47285272 Msa0121470:CDS
TCGCTGAAGTATCTGGTCGG+TGG 0.648721 1_3:+47285975 Msa0121470:CDS
CGAGGACCTACTATAATGCA+AGG 0.648782 1_3:+47288471 Msa0121470:CDS
TCCCCACCAACCCCATCACG+TGG 0.649872 1_3:-47285776 None:intergenic
ATCAAGACCAGAACGGCGAG+GGG 0.656642 1_3:+47285721 Msa0121470:CDS
TACGGCGGTAGCAGGAGCAG+TGG 0.664834 1_3:+47285698 Msa0121470:CDS
TGTTTCCATAGAAAATCCAA+AGG 0.666777 1_3:+47288326 Msa0121470:CDS
ACCTGAATGACGTTGACACG+AGG 0.667955 1_3:-47286047 None:intergenic
TCGGTGGTGCTGCTCCGTTG+GGG 0.669002 1_3:+47285991 Msa0121470:CDS
GGATCAAGACCAGAACGGCG+AGG 0.669069 1_3:+47285719 Msa0121470:CDS
GGATAACGTACACGCAGCTG+CGG 0.675038 1_3:+47285796 Msa0121470:CDS
TGTGTCTCAATCCGACGTGG+CGG 0.685220 1_3:+47285605 Msa0121470:CDS
TTAGGGGAAATTTGGCTACG+AGG 0.686700 1_3:+47288453 Msa0121470:CDS
GTAAAGAATCGCCGCCACGT+CGG 0.689587 1_3:-47285616 None:intergenic
ACGTACACGCAGCTGCGGAG+AGG 0.692747 1_3:+47285801 Msa0121470:CDS
TATGACTTACGGAATCACCC+CGG 0.696487 1_3:-47289082 None:intergenic
TATGGCATGACTGAAGCATG+TGG 0.712585 1_3:+47288300 Msa0121470:CDS
TTTACTCTTCAGGCACCACG+GGG 0.716922 1_3:+47285634 Msa0121470:CDS
CCTTCCACCGAATCAATTAG+GGG 0.722238 1_3:+47288437 Msa0121470:CDS
AGATGTGTCTCAATCCGACG+TGG 0.741368 1_3:+47285602 Msa0121470:CDS
GCAGTGGATCAAGACCAGAA+CGG 0.745499 1_3:+47285714 Msa0121470:CDS
TTTGTCTAGAGAGTTCGGAG+AGG 0.776768 1_3:-47285392 None:intergenic
GCTGCGGAGAGGGAACACGG+TGG 0.815166 1_3:+47285812 Msa0121470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATATTATGCTTAATT+TGG - chr1_3:47286197-47286216 None:intergenic 10.0%
!!! TTCAACATTTATTTTTTAAT+TGG + chr1_3:47286256-47286275 Msa0121470:intron 10.0%
!!! ATATTTTTTTAATAGTAAAG+AGG + chr1_3:47286435-47286454 Msa0121470:intron 10.0%
!! AAATTTATTTAAATATAACG+AGG + chr1_3:47287363-47287382 Msa0121470:intron 10.0%
!! AAAAAAAAAAGAAAGATAAA+TGG + chr1_3:47287470-47287489 Msa0121470:intron 10.0%
!! TTGAATTAAATTGTAATAAA+AGG + chr1_3:47287863-47287882 Msa0121470:intron 10.0%
!! TGAATTAAATTGTAATAAAA+GGG + chr1_3:47287864-47287883 Msa0121470:intron 10.0%
!!! ATTTTATACATAAATAAATC+AGG + chr1_3:47288876-47288895 Msa0121470:intron 10.0%
!! AGAAAAAAAAAAGATAAAAT+AGG + chr1_3:47289807-47289826 Msa0121470:intron 10.0%
!! AAAATAAAATATAGTGTAAT+AGG - chr1_3:47290484-47290503 None:intergenic 10.0%
!!! ACTATATTTTATTTTTAACA+AGG + chr1_3:47290489-47290508 Msa0121470:intron 10.0%
!!! TAATTTAATTTTTATGTGTT+GGG - chr1_3:47290780-47290799 None:intergenic 10.0%
!!! TTAATTTAATTTTTATGTGT+TGG - chr1_3:47290781-47290800 None:intergenic 10.0%
!! ATAAAAAGTTAATTAAAAGA+GGG - chr1_3:47291912-47291931 None:intergenic 10.0%
!! TATAAAAAGTTAATTAAAAG+AGG - chr1_3:47291913-47291932 None:intergenic 10.0%
!!! AATTTAATTAACTTTTACTT+AGG + chr1_3:47292047-47292066 Msa0121470:intron 10.0%
!!! AATTCAACTATTTTTTTTTA+GGG - chr1_3:47292311-47292330 None:intergenic 10.0%
!!! AAATTCAACTATTTTTTTTT+AGG - chr1_3:47292312-47292331 None:intergenic 10.0%
!! ATTGTCAAAAAAAAAAAAAA+AGG + chr1_3:47292966-47292985 Msa0121470:three_prime_UTR 10.0%
!!! TTTTTAATTGGTTTAAATCA+TGG + chr1_3:47286268-47286287 Msa0121470:intron 15.0%
!!! AAAAAGGAGAAATTTTAATA+TGG + chr1_3:47286382-47286401 Msa0121470:intron 15.0%
!! AGTTTATTAATTGAAATAAG+AGG - chr1_3:47286590-47286609 None:intergenic 15.0%
!!! TGTTTTTTTCTTATAAAGTA+AGG - chr1_3:47286776-47286795 None:intergenic 15.0%
!! GATAAAAATTAAAGTTGTAT+TGG + chr1_3:47286863-47286882 Msa0121470:intron 15.0%
!! AGTATTTAAAGAATTACTTA+TGG + chr1_3:47286957-47286976 Msa0121470:intron 15.0%
!! TAAATGTAAAATGACATAAA+AGG + chr1_3:47287194-47287213 Msa0121470:intron 15.0%
!! AAATGTAAAATGACATAAAA+GGG + chr1_3:47287195-47287214 Msa0121470:intron 15.0%
!!! TATATATACTTTTTTGTCAA+CGG + chr1_3:47287386-47287405 Msa0121470:intron 15.0%
!! TATCATTACTCATATTTATT+AGG + chr1_3:47287802-47287821 Msa0121470:intron 15.0%
!! ATCATTACTCATATTTATTA+GGG + chr1_3:47287803-47287822 Msa0121470:intron 15.0%
!! GAATTTAGATAAAACAATAA+GGG + chr1_3:47287895-47287914 Msa0121470:intron 15.0%
!! ATTAATAATGAAATGTGTAT+TGG - chr1_3:47289004-47289023 None:intergenic 15.0%
!! TACACATTTCATTATTAATT+AGG + chr1_3:47289005-47289024 Msa0121470:intron 15.0%
!!! CATTATTTCTTTTAAAAACA+TGG - chr1_3:47289156-47289175 None:intergenic 15.0%
!!! TCAATTTAATGAATCATTTT+TGG + chr1_3:47289490-47289509 Msa0121470:intron 15.0%
!! TTAAAGCACATATTTATATT+TGG - chr1_3:47290318-47290337 None:intergenic 15.0%
!!! TTTTTCGTTTACTTATTTTA+GGG - chr1_3:47290397-47290416 None:intergenic 15.0%
!!! ATTTTTCGTTTACTTATTTT+AGG - chr1_3:47290398-47290417 None:intergenic 15.0%
!!! TTTTTTTTTCTTTCTCTTTT+TGG - chr1_3:47290589-47290608 None:intergenic 15.0%
!!! AAATACGTTAATTTAACTTT+TGG - chr1_3:47290656-47290675 None:intergenic 15.0%
!! ATTAACTAATATATCATATG+CGG + chr1_3:47291146-47291165 Msa0121470:intron 15.0%
!! ATAAAAATTAAAAATTGGTG+CGG - chr1_3:47291259-47291278 None:intergenic 15.0%
!! ATTATATTAGTAGTATGTAT+TGG + chr1_3:47291308-47291327 Msa0121470:intron 15.0%
!! TTATATTAGTAGTATGTATT+GGG + chr1_3:47291309-47291328 Msa0121470:intron 15.0%
!!! ATTGTTTTTATCTAAGTTTA+CGG + chr1_3:47291473-47291492 Msa0121470:intron 15.0%
!!! TAAATTTATCGGTTATTTAA+AGG + chr1_3:47291869-47291888 Msa0121470:intron 15.0%
!!! TAAGTACAGATTTTTTTTTA+GGG - chr1_3:47292395-47292414 None:intergenic 15.0%
!!! TTAAGTACAGATTTTTTTTT+AGG - chr1_3:47292396-47292415 None:intergenic 15.0%
!! AAAAAAAACAAATTCAAAGA+AGG - chr1_3:47292433-47292452 None:intergenic 15.0%
!! TTAAAATGTAATGATATACT+GGG + chr1_3:47292522-47292541 Msa0121470:intron 15.0%
!! CCTCAAAATAATTATTAATT+AGG - chr1_3:47292549-47292568 None:intergenic 15.0%
!!! CCTAATTAATAATTATTTTG+AGG + chr1_3:47292546-47292565 Msa0121470:intron 15.0%
!! ACAAAATATATCAAAGTTAT+AGG + chr1_3:47292886-47292905 Msa0121470:CDS 15.0%
!!! ATTTAATTTTCAACTTTGTT+TGG - chr1_3:47293054-47293073 None:intergenic 15.0%
!! TCATAAAAACTTAATAGCTA+CGG + chr1_3:47285680-47285699 Msa0121470:CDS 20.0%
!! TTTCTTTATGTGTGTTTATT+TGG - chr1_3:47286416-47286435 None:intergenic 20.0%
!! GTATTTATTGAAGGTAAAAT+TGG + chr1_3:47286838-47286857 Msa0121470:intron 20.0%
!!! TCATATAATGGAAATACTAA+TGG - chr1_3:47286986-47287005 None:intergenic 20.0%
!!! TATTTTTTGTCAACAACATA+AGG + chr1_3:47287418-47287437 Msa0121470:intron 20.0%
!! AAAAAAAGAAAGATAAATGG+AGG + chr1_3:47287473-47287492 Msa0121470:intron 20.0%
!! TTGTCAAAAAAAAAATAACG+AGG + chr1_3:47287592-47287611 Msa0121470:intron 20.0%
!! TGTCAAAAAAAAAATAACGA+GGG + chr1_3:47287593-47287612 Msa0121470:intron 20.0%
!! TTTATTAGGGAAAAAAAATC+AGG + chr1_3:47287816-47287835 Msa0121470:intron 20.0%
!! TTATTAGGGAAAAAAAATCA+GGG + chr1_3:47287817-47287836 Msa0121470:intron 20.0%
!! TTGTAATAAAAGGGTAAAAA+TGG + chr1_3:47287873-47287892 Msa0121470:intron 20.0%
!! GGAATTTAGATAAAACAATA+AGG + chr1_3:47287894-47287913 Msa0121470:intron 20.0%
!!! AAAAAGAAAGCATGTTTATT+AGG - chr1_3:47288174-47288193 None:intergenic 20.0%
!!! AATAAACATGCTTTCTTTTT+TGG + chr1_3:47288174-47288193 Msa0121470:intron 20.0%
!! AAACTATTTGCATATTAGTA+TGG + chr1_3:47288219-47288238 Msa0121470:intron 20.0%
!!! TATTTCTTTTAAAAACATGG+TGG - chr1_3:47289153-47289172 None:intergenic 20.0%
!!! AAACTTTTGAATATCTTCTT+TGG - chr1_3:47289280-47289299 None:intergenic 20.0%
!!! AGTTGAGATCTTTATATTTT+CGG + chr1_3:47288147-47288166 Msa0121470:intron 20.0%
!! ATTCATTAAATTGAAATGCA+GGG - chr1_3:47289484-47289503 None:intergenic 20.0%
!!! GGTAATTTTTTAATCTACAT+AGG + chr1_3:47289777-47289796 Msa0121470:intron 20.0%
!!! ACGAATCAACTATTTTTTTT+TGG - chr1_3:47289854-47289873 None:intergenic 20.0%
!! AAGAGAAAGAAAAAAAAAGA+AGG + chr1_3:47290591-47290610 Msa0121470:intron 20.0%
!!! ATAAAGTCAAGTTATTTTAC+CGG - chr1_3:47290691-47290710 None:intergenic 20.0%
!!! AGACTTTATTTATCATTTGT+TGG - chr1_3:47290714-47290733 None:intergenic 20.0%
!!! GATAAATAAAGTCTTTCTTT+TGG + chr1_3:47290720-47290739 Msa0121470:intron 20.0%
!! TAACATGTTAATCATTAGAT+TGG - chr1_3:47290898-47290917 None:intergenic 20.0%
!! TTAACTAATATATCATATGC+GGG + chr1_3:47291147-47291166 Msa0121470:intron 20.0%
!!! CAAAATAACTTCTTTTTTTG+TGG + chr1_3:47291411-47291430 Msa0121470:intron 20.0%
!! AACAATGTATAATATATACG+AGG - chr1_3:47291459-47291478 None:intergenic 20.0%
!!! CTTTTATCTTTTTTGAGTAA+TGG - chr1_3:47291588-47291607 None:intergenic 20.0%
!! CAAATTTATTAGTCATTAGA+GGG + chr1_3:47291944-47291963 Msa0121470:intron 20.0%
!! ATAGAATTAATTGTACATGT+GGG - chr1_3:47292207-47292226 None:intergenic 20.0%
!! AATAGAATTAATTGTACATG+TGG - chr1_3:47292208-47292227 None:intergenic 20.0%
!!! AAGTACAGATTTTTTTTTAG+GGG - chr1_3:47292394-47292413 None:intergenic 20.0%
!! GTTAAAATGTAATGATATAC+TGG + chr1_3:47292521-47292540 Msa0121470:intron 20.0%
!! TTATAGGTATATTAATGCAT+TGG + chr1_3:47292902-47292921 Msa0121470:exon 20.0%
! GAATATTAATGGTAAACCTA+AGG - chr1_3:47285484-47285503 None:intergenic 25.0%
!! TTAATTGGTTTAAATCATGG+TGG + chr1_3:47286271-47286290 Msa0121470:intron 25.0%
!! TAATTGGTTTAAATCATGGT+GGG + chr1_3:47286272-47286291 Msa0121470:intron 25.0%
! TTCAACAATCATTCTCTTAT+TGG - chr1_3:47286353-47286372 None:intergenic 25.0%
! TGTTGAAGAGAATGTTAAAA+AGG + chr1_3:47286366-47286385 Msa0121470:intron 25.0%
! TTGAAATAAGAGGAATGTTA+GGG - chr1_3:47286580-47286599 None:intergenic 25.0%
! ATTGAAATAAGAGGAATGTT+AGG - chr1_3:47286581-47286600 None:intergenic 25.0%
! AAATTGTGTGATAGAAAAGT+TGG + chr1_3:47286814-47286833 Msa0121470:intron 25.0%
!! AAAGTTGGAGTATTTATTGA+AGG + chr1_3:47286829-47286848 Msa0121470:intron 25.0%
! TATATATTGTGAGCAACATA+AGG + chr1_3:47287496-47287515 Msa0121470:intron 25.0%
! AACATAAGGCAAAAGATAAA+TGG + chr1_3:47287510-47287529 Msa0121470:intron 25.0%
! AAGTGAGATAAATAATAACG+AGG + chr1_3:47287562-47287581 Msa0121470:intron 25.0%
! AGTGAGATAAATAATAACGA+GGG + chr1_3:47287563-47287582 Msa0121470:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr1_3:47287732-47287751 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr1_3:47287745-47287764 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr1_3:47287744-47287763 Msa0121470:intron 25.0%
! AAAAATCAGGGATGTATATT+AGG + chr1_3:47287829-47287848 Msa0121470:intron 25.0%
! AAAATCAGGGATGTATATTA+GGG + chr1_3:47287830-47287849 Msa0121470:intron 25.0%
! TAAAACAATAAGGGTAAAAG+TGG + chr1_3:47287904-47287923 Msa0121470:intron 25.0%
! AGAATCTCGTATAGTTAATT+TGG + chr1_3:47288401-47288420 Msa0121470:CDS 25.0%
!!! TCTTGGATATTTTGATGAAA+AGG + chr1_3:47288697-47288716 Msa0121470:CDS 25.0%
!!! CTTGGATATTTTGATGAAAA+GGG + chr1_3:47288698-47288717 Msa0121470:CDS 25.0%
!!! TTGGATATTTTGATGAAAAG+GGG + chr1_3:47288699-47288718 Msa0121470:CDS 25.0%
! AATTGAATCCTCTACAATTA+TGG - chr1_3:47288834-47288853 None:intergenic 25.0%
! AGGATAACAAATTAACAATG+TGG + chr1_3:47288896-47288915 Msa0121470:intron 25.0%
! GAGCATTAAAATATGACTTA+CGG - chr1_3:47289096-47289115 None:intergenic 25.0%
! TAAAAGAAATAATGACTCAC+CGG + chr1_3:47289162-47289181 Msa0121470:intron 25.0%
! TTGAATATCTTCTTTGGTTA+TGG - chr1_3:47289274-47289293 None:intergenic 25.0%
! GATTCATTAAATTGAAATGC+AGG - chr1_3:47289485-47289504 None:intergenic 25.0%
!!! TGTTTTAGACTAAGTTACTT+AGG + chr1_3:47289908-47289927 Msa0121470:intron 25.0%
!! AATTTAAGATGGTAGGATAA+GGG + chr1_3:47289945-47289964 Msa0121470:intron 25.0%
!!! CTTCAGTTTGTAGTTTTATA+TGG - chr1_3:47290175-47290194 None:intergenic 25.0%
! GCACATATTTATATTTGGAA+GGG - chr1_3:47290313-47290332 None:intergenic 25.0%
! AGCACATATTTATATTTGGA+AGG - chr1_3:47290314-47290333 None:intergenic 25.0%
!! AAACACTGAAGTTTTACAAA+TGG + chr1_3:47290551-47290570 Msa0121470:intron 25.0%
!! TTTTTATGTGTTGGGTAATA+TGG - chr1_3:47290772-47290791 None:intergenic 25.0%
!! GTATAATGGAATTCCTTTAA+AGG - chr1_3:47291085-47291104 None:intergenic 25.0%
! TCAGATTTACTTTGGTATAA+TGG - chr1_3:47291099-47291118 None:intergenic 25.0%
!!! AATAACTTCTTTTTTTGTGG+TGG + chr1_3:47291414-47291433 Msa0121470:intron 25.0%
! TCTATCTACAAAATCTTCTT+CGG - chr1_3:47291728-47291747 None:intergenic 25.0%
! CCTCTAATGACTAATAAATT+TGG - chr1_3:47291946-47291965 None:intergenic 25.0%
! CCAAATTTATTAGTCATTAG+AGG + chr1_3:47291943-47291962 Msa0121470:intron 25.0%
! ATTTACAATGGTGCTTAATA+GGG - chr1_3:47292096-47292115 None:intergenic 25.0%
! TATTTACAATGGTGCTTAAT+AGG - chr1_3:47292097-47292116 None:intergenic 25.0%
! TAGAATTAATTGTACATGTG+GGG - chr1_3:47292206-47292225 None:intergenic 25.0%
! ATGTCAACTAAAATTTCCAA+CGG - chr1_3:47292354-47292373 None:intergenic 25.0%
!!! AGTACAGATTTTTTTTTAGG+GGG - chr1_3:47292393-47292412 None:intergenic 25.0%
!!! TAATAATTATTTTGAGGTGC+TGG + chr1_3:47292552-47292571 Msa0121470:intron 25.0%
!!! AATAATTATTTTGAGGTGCT+GGG + chr1_3:47292553-47292572 Msa0121470:intron 25.0%
! TATATATATATCCACTCATC+TGG - chr1_3:47292693-47292712 None:intergenic 25.0%
!!! TTGTTTTATTTCCTTTGTCT+AGG + chr1_3:47292763-47292782 Msa0121470:intron 25.0%
! CTCACTAAAATTTAAATCGA+AGG - chr1_3:47293082-47293101 None:intergenic 25.0%
ATGTATTTGTCTAGAGAGTT+CGG - chr1_3:47285400-47285419 None:intergenic 30.0%
GATACAGTTATAACAAGCTT+GGG - chr1_3:47285432-47285451 None:intergenic 30.0%
AGATACAGTTATAACAAGCT+TGG - chr1_3:47285433-47285452 None:intergenic 30.0%
!! AAAATTGAAGCATTGACCTT+AGG + chr1_3:47285465-47285484 Msa0121470:CDS 30.0%
TAAAAACTTAATAGCTACGG+CGG + chr1_3:47285683-47285702 Msa0121470:CDS 30.0%
!! TGATTTGGAGAAGATTTTTG+CGG + chr1_3:47285854-47285873 Msa0121470:CDS 30.0%
GTTGAAGTGAGTGTTAAAAA+GGG - chr1_3:47286242-47286261 None:intergenic 30.0%
TGTTGAAGTGAGTGTTAAAA+AGG - chr1_3:47286243-47286262 None:intergenic 30.0%
TGTATGACCATCACTTTAAA+TGG - chr1_3:47286320-47286339 None:intergenic 30.0%
GACACAAACACATAAAAAGA+TGG - chr1_3:47286496-47286515 None:intergenic 30.0%
! GTCCAAAAACAATGTTGATT+TGG + chr1_3:47286513-47286532 Msa0121470:intron 30.0%
! GACCAAATCAACATTGTTTT+TGG - chr1_3:47286518-47286537 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_3:47286684-47286703 None:intergenic 30.0%
!! TTCCTTAATTTGTGTGCAAT+TGG - chr1_3:47286710-47286729 None:intergenic 30.0%
!! TTCAAAATGAGTGTCACTTT+AGG - chr1_3:47286929-47286948 None:intergenic 30.0%
!! AAGTGACACTCATTTTGAAA+CGG + chr1_3:47286930-47286949 Msa0121470:intron 30.0%
! GAAGTGTTTGGTAAAATTAG+CGG + chr1_3:47287158-47287177 Msa0121470:intron 30.0%
!!! ATATACTTTTTTGTCAACGG+AGG + chr1_3:47287389-47287408 Msa0121470:intron 30.0%
ATAAGGCAAAAGATAAATGG+AGG + chr1_3:47287513-47287532 Msa0121470:intron 30.0%
GTCAAAAAGTTGTCAAAAAG+TGG - chr1_3:47287652-47287671 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr1_3:47287719-47287738 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr1_3:47287770-47287789 Msa0121470:intron 30.0%
GATGTATATTAGGGAATTGT+AGG + chr1_3:47287839-47287858 Msa0121470:intron 30.0%
TGAAATAAGCTATAAGCTCA+TGG + chr1_3:47287997-47288016 Msa0121470:intron 30.0%
! TTGACAAAAATAGCTCTGTT+TGG - chr1_3:47288036-47288055 None:intergenic 30.0%
!!! AAGAGCTAAAAGCTCTTTTT+TGG + chr1_3:47288078-47288097 Msa0121470:intron 30.0%
CATGTTGTGTATGATAATTG+TGG + chr1_3:47288271-47288290 Msa0121470:intron 30.0%
TGTTTCCATAGAAAATCCAA+AGG + chr1_3:47288326-47288345 Msa0121470:CDS 30.0%
CAAATTTCCCCTAATTGATT+CGG - chr1_3:47288447-47288466 None:intergenic 30.0%
ATCTTACCTTGCATTATAGT+AGG - chr1_3:47288480-47288499 None:intergenic 30.0%
!! TTCTTTTAAAAACATGGTGG+TGG - chr1_3:47289150-47289169 None:intergenic 30.0%
AAAAGAAATAATGACTCACC+GGG + chr1_3:47289163-47289182 Msa0121470:intron 30.0%
TCAAAAGTTTGTAGCAAAAC+AGG + chr1_3:47289290-47289309 Msa0121470:CDS 30.0%
ATTAAATTGAAATGCAGGGT+TGG - chr1_3:47289480-47289499 None:intergenic 30.0%
!! ATGCGATTTATTTTCTTGCT+CGG - chr1_3:47289645-47289664 None:intergenic 30.0%
TTGGATTAACATACGACTTT+CGG - chr1_3:47289835-47289854 None:intergenic 30.0%
GATTCGTCAACCTATATTTA+AGG + chr1_3:47289867-47289886 Msa0121470:intron 30.0%
AGTTACTTAGGTTTGTCAAA+TGG + chr1_3:47289920-47289939 Msa0121470:intron 30.0%
GTCAAATGGAGAATTTAAGA+TGG + chr1_3:47289934-47289953 Msa0121470:intron 30.0%
! AATGGAGAATTTAAGATGGT+AGG + chr1_3:47289938-47289957 Msa0121470:intron 30.0%
! GAATTTAAGATGGTAGGATA+AGG + chr1_3:47289944-47289963 Msa0121470:intron 30.0%
TTTGCATCACTTTCTTTGTA+CGG - chr1_3:47290104-47290123 None:intergenic 30.0%
ATATTGCACTCTTTCCTTTA+AGG + chr1_3:47290276-47290295 Msa0121470:intron 30.0%
! GCTTTAACTTTATGAGCAAT+TGG + chr1_3:47290331-47290350 Msa0121470:intron 30.0%
TAAACGAAAAATTATCCCGA+GGG + chr1_3:47290406-47290425 Msa0121470:intron 30.0%
! GTATTTCAGACCATTTTATC+CGG - chr1_3:47290852-47290871 None:intergenic 30.0%
TATAACTTCTTCAGCAACAT+TGG - chr1_3:47290921-47290940 None:intergenic 30.0%
!! ATCAGCTAATCACTTGTTTT+TGG - chr1_3:47290946-47290965 None:intergenic 30.0%
! CATTTTTGTGTGAATAAGTG+TGG - chr1_3:47290978-47290997 None:intergenic 30.0%
!! TAGAAATCGACTTTTTATCG+AGG - chr1_3:47291037-47291056 None:intergenic 30.0%
!! TAAAGGTGTTTGTGTTTACT+TGG - chr1_3:47291068-47291087 None:intergenic 30.0%
GTAAACACAAACACCTTTAA+AGG + chr1_3:47291069-47291088 Msa0121470:intron 30.0%
! CAACTGATTCAGATTTACTT+TGG - chr1_3:47291107-47291126 None:intergenic 30.0%
! GATCTAATTGCTATTGTCAA+TGG + chr1_3:47291169-47291188 Msa0121470:intron 30.0%
TTTACAATGGTGCTTAATAG+GGG - chr1_3:47292095-47292114 None:intergenic 30.0%
! TATTCATTGGTGACACAAAA+GGG - chr1_3:47292125-47292144 None:intergenic 30.0%
! ATATTCATTGGTGACACAAA+AGG - chr1_3:47292126-47292145 None:intergenic 30.0%
! TTTTGTGTCACCAATGAATA+TGG + chr1_3:47292125-47292144 Msa0121470:intron 30.0%
TTCATAAGCACCATATTCAT+TGG - chr1_3:47292138-47292157 None:intergenic 30.0%
AATGAATATGGTGCTTATGA+AGG + chr1_3:47292137-47292156 Msa0121470:intron 30.0%
!!! TCGTACGCTTACATTTTTTA+CGG - chr1_3:47292719-47292738 None:intergenic 30.0%
TAAAAAATGTAAGCGTACGA+AGG + chr1_3:47292719-47292738 Msa0121470:intron 30.0%
!! ATTTTCAACTTTGTTTGGTG+AGG - chr1_3:47293049-47293068 None:intergenic 30.0%
!! AGGAATACGTCATTGTTTTG+AGG - chr1_3:47285071-47285090 None:intergenic 35.0%
CTATAGCTAGAAAGCAAACA+GGG - chr1_3:47285329-47285348 None:intergenic 35.0%
ACTATAGCTAGAAAGCAAAC+AGG - chr1_3:47285330-47285349 None:intergenic 35.0%
!! TTTCTAGCTATAGTTGCCAT+AGG + chr1_3:47285336-47285355 Msa0121470:CDS 35.0%
GGTTCGTCAAGGAATATTAA+TGG - chr1_3:47285495-47285514 None:intergenic 35.0%
! TTCTAAGAAGTTTGGTCCTA+GGG + chr1_3:47285515-47285534 Msa0121470:CDS 35.0%
CAATAGTTCCGATGATATTC+CGG + chr1_3:47285572-47285591 Msa0121470:CDS 35.0%
! TGGGTTTCACACTTTGAAAA+TGG + chr1_3:47286291-47286310 Msa0121470:intron 35.0%
! GGGTTTCACACTTTGAAAAT+GGG + chr1_3:47286292-47286311 Msa0121470:intron 35.0%
! ATGGGTTCCATTTAAAGTGA+TGG + chr1_3:47286310-47286329 Msa0121470:intron 35.0%
!! ACAATGTTGATTTGGTCTTG+TGG + chr1_3:47286521-47286540 Msa0121470:intron 35.0%
! TTTAACGAGGTATTCTTCCA+TGG - chr1_3:47286547-47286566 None:intergenic 35.0%
AGCCAATTGCACACAAATTA+AGG + chr1_3:47286705-47286724 Msa0121470:intron 35.0%
!! GAGTCACATACACTTTTTGA+GGG - chr1_3:47287047-47287066 None:intergenic 35.0%
!! AGAGTCACATACACTTTTTG+AGG - chr1_3:47287048-47287067 None:intergenic 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + chr1_3:47287146-47287165 Msa0121470:intron 35.0%
CATAAGGCAAGAGAGATAAA+TGG + chr1_3:47287434-47287453 Msa0121470:intron 35.0%
TTGCATATTAGTATGGCATG+TGG + chr1_3:47288226-47288245 Msa0121470:intron 35.0%
TGCATATTAGTATGGCATGT+GGG + chr1_3:47288227-47288246 Msa0121470:intron 35.0%
TTGTGTATGATAATTGTGGC+AGG + chr1_3:47288275-47288294 Msa0121470:intron 35.0%
TGTGTATGATAATTGTGGCA+GGG + chr1_3:47288276-47288295 Msa0121470:intron 35.0%
TCCATAGAAAATCCAAAGGA+AGG + chr1_3:47288330-47288349 Msa0121470:CDS 35.0%
! TCCTTCCTTTGGATTTTCTA+TGG - chr1_3:47288334-47288353 None:intergenic 35.0%
ACTATACGAGATTCTACACT+TGG - chr1_3:47288396-47288415 None:intergenic 35.0%
CGAATCAATTAGGGGAAATT+TGG + chr1_3:47288445-47288464 Msa0121470:CDS 35.0%
CATCCAACCTTGATCATTAA+TGG - chr1_3:47288666-47288685 None:intergenic 35.0%
AAAGAGCTCATCAAATGTAG+TGG + chr1_3:47288746-47288765 Msa0121470:CDS 35.0%
AATTCCCACCATAATTGTAG+AGG + chr1_3:47288823-47288842 Msa0121470:intron 35.0%
GAATCCTCTACAATTATGGT+GGG - chr1_3:47288830-47288849 None:intergenic 35.0%
TGAATCCTCTACAATTATGG+TGG - chr1_3:47288831-47288850 None:intergenic 35.0%
TTAGAATTGTCACAAAGTCC+CGG - chr1_3:47289184-47289203 None:intergenic 35.0%
TCTTTGGTTATGGAGCTATT+GGG - chr1_3:47289264-47289283 None:intergenic 35.0%
TTCTTTGGTTATGGAGCTAT+TGG - chr1_3:47289265-47289284 None:intergenic 35.0%
GGATAAAAACGAATGTGGTT+TGG - chr1_3:47289402-47289421 None:intergenic 35.0%
! TTCCCAAAGCATCATTATAG+CGG + chr1_3:47289594-47289613 Msa0121470:intron 35.0%
!! TGCGATTTATTTTCTTGCTC+GGG - chr1_3:47289644-47289663 None:intergenic 35.0%
ATCGCATGAAACCTTGTAAA+AGG + chr1_3:47289658-47289677 Msa0121470:intron 35.0%
! TTATGAGGATGCCTTTTACA+AGG - chr1_3:47289672-47289691 None:intergenic 35.0%
TCCTCATAATTTCCCTAAAG+AGG + chr1_3:47289683-47289702 Msa0121470:intron 35.0%
CCTCATAATTTCCCTAAAGA+GGG + chr1_3:47289684-47289703 Msa0121470:intron 35.0%
ATTTCACCTTGAGGTCAAAA+TGG + chr1_3:47289709-47289728 Msa0121470:intron 35.0%
!! GTAAATCCATTTTGACCTCA+AGG - chr1_3:47289718-47289737 None:intergenic 35.0%
GCTACACTATAGATCATTCT+TGG - chr1_3:47289740-47289759 None:intergenic 35.0%
TCGTCAACCTATATTTAAGG+TGG + chr1_3:47289870-47289889 Msa0121470:intron 35.0%
! ACCTATATTTAAGGTGGAGT+TGG + chr1_3:47289876-47289895 Msa0121470:intron 35.0%
ACCAACTCCACCTTAAATAT+AGG - chr1_3:47289880-47289899 None:intergenic 35.0%
!! TATTTAAGGTGGAGTTGGTA+AGG + chr1_3:47289881-47289900 Msa0121470:intron 35.0%
AAGATCACATTGATCTTGAG+AGG + chr1_3:47290004-47290023 Msa0121470:intron 35.0%
TTGCATCACTTTCTTTGTAC+GGG - chr1_3:47290103-47290122 None:intergenic 35.0%
AAAGAAAGTGATGCAAACCT+TGG + chr1_3:47290107-47290126 Msa0121470:intron 35.0%
! TGTGATTGTTGTTAAGTCCA+AGG - chr1_3:47290127-47290146 None:intergenic 35.0%
TGGCAAAGATGAACTACATT+AGG + chr1_3:47290351-47290370 Msa0121470:intron 35.0%
! TTTAGGGTTCTTCTCTTTCA+AGG - chr1_3:47290381-47290400 None:intergenic 35.0%
GTAAACGAAAAATTATCCCG+AGG + chr1_3:47290405-47290424 Msa0121470:intron 35.0%
TTAGATACCCAAACAAGAGA+AGG + chr1_3:47290625-47290644 Msa0121470:intron 35.0%
TAGATACCCAAACAAGAGAA+GGG + chr1_3:47290626-47290645 Msa0121470:intron 35.0%
! CGTATTTTATCTTCAACCAC+CGG + chr1_3:47290669-47290688 Msa0121470:intron 35.0%
!! AAGTCAAGTTATTTTACCGG+TGG - chr1_3:47290688-47290707 None:intergenic 35.0%
TGCATGTTAAATAGCCAAAC+CGG + chr1_3:47290830-47290849 Msa0121470:intron 35.0%
AATAGCCAAACCGGATAAAA+TGG + chr1_3:47290839-47290858 Msa0121470:intron 35.0%
TCTACAAAATCTTCTTCGGT+GGG - chr1_3:47291724-47291743 None:intergenic 35.0%
ATCTACAAAATCTTCTTCGG+TGG - chr1_3:47291725-47291744 None:intergenic 35.0%
!! AGAGGGATATTTTAGAGACA+TGG - chr1_3:47291895-47291914 None:intergenic 35.0%
TAGTCATTAGAGGGTGATTT+AGG + chr1_3:47291953-47291972 Msa0121470:intron 35.0%
TTTACTTAGGCCATCTACAA+TGG + chr1_3:47292060-47292079 Msa0121470:intron 35.0%
TTACTTAGGCCATCTACAAT+GGG + chr1_3:47292061-47292080 Msa0121470:intron 35.0%
!! AAAGGGGTGCTTATTTACAA+TGG - chr1_3:47292108-47292127 None:intergenic 35.0%
! ATTCATTGGTGACACAAAAG+GGG - chr1_3:47292124-47292143 None:intergenic 35.0%
TAGAATTCATTCCAGATGAG+TGG + chr1_3:47292679-47292698 Msa0121470:intron 35.0%
TTGCACCATACAAAAGGTTA+CGG + chr1_3:47292786-47292805 Msa0121470:CDS 35.0%
CTTTCTTAAGATCTTTCCTG+TGG - chr1_3:47292846-47292865 None:intergenic 35.0%
CACAGGAAAGATCTTAAGAA+AGG + chr1_3:47292844-47292863 Msa0121470:CDS 35.0%
CTGCTTCATCTCTATATATG+TGG - chr1_3:47292944-47292963 None:intergenic 35.0%
!!! AAAAGGAGTGCTTTGTTTTC+TGG + chr1_3:47292983-47293002 Msa0121470:three_prime_UTR 35.0%
GTATAAAGGACTACTGGTAG+TGG - chr1_3:47285370-47285389 None:intergenic 40.0%
AGTTATAACAAGCTTGGGCT+TGG - chr1_3:47285427-47285446 None:intergenic 40.0%
ACTTCTTAGAAGGTTCGTCA+AGG - chr1_3:47285506-47285525 None:intergenic 40.0%
! GACGAACCTTCTAAGAAGTT+TGG + chr1_3:47285507-47285526 Msa0121470:CDS 40.0%
CTAGGACCAAACTTCTTAGA+AGG - chr1_3:47285516-47285535 None:intergenic 40.0%
! CTTCTAAGAAGTTTGGTCCT+AGG + chr1_3:47285514-47285533 Msa0121470:CDS 40.0%
TCCTAGGGTTTCAAACTATG+AGG + chr1_3:47285530-47285549 Msa0121470:CDS 40.0%
! TCCTCATAGTTTGAAACCCT+AGG - chr1_3:47285534-47285553 None:intergenic 40.0%
TCTGTTCACCGGAATATCAT+CGG - chr1_3:47285583-47285602 None:intergenic 40.0%
GATGGGTGGTAGATTTGATT+TGG + chr1_3:47285839-47285858 Msa0121470:CDS 40.0%
! TTTGGAGAAGATTTTTGCGG+CGG + chr1_3:47285857-47285876 Msa0121470:CDS 40.0%
TGCATCAAATCTTTCCCCAA+CGG - chr1_3:47286008-47286027 None:intergenic 40.0%
AATCAAGCTAATGCCTCGAA+AGG - chr1_3:47286118-47286137 None:intergenic 40.0%
ACCATGTGATAAACGTTGCA+AGG + chr1_3:47286170-47286189 Msa0121470:intron 40.0%
ACCTTGCAACGTTTATCACA+TGG - chr1_3:47286174-47286193 None:intergenic 40.0%
GACTCTTTGTGAAAGATGCT+CGG + chr1_3:47287062-47287081 Msa0121470:intron 40.0%
AAGGCAAGAGAGATAAATGG+AGG + chr1_3:47287437-47287456 Msa0121470:intron 40.0%
CTATAAGCTCAAACGCTACT+TGG + chr1_3:47287943-47287962 Msa0121470:intron 40.0%
TCATTCACTCTCTATGACCT+CGG - chr1_3:47288120-47288139 None:intergenic 40.0%
TATTAGTATGGCATGTGGGA+TGG + chr1_3:47288231-47288250 Msa0121470:intron 40.0%
GTGTATGATAATTGTGGCAG+GGG + chr1_3:47288277-47288296 Msa0121470:intron 40.0%
GAAAGGAGATTTCCTTCCTT+TGG - chr1_3:47288345-47288364 None:intergenic 40.0%
GGAAATCTCCTTTCAGTTTC+TGG + chr1_3:47288351-47288370 Msa0121470:CDS 40.0%
CAGTTGAACCAGAAACTGAA+AGG - chr1_3:47288362-47288381 None:intergenic 40.0%
!! CTTTCAGTTTCTGGTTCAAC+TGG + chr1_3:47288360-47288379 Msa0121470:CDS 40.0%
!! ATTTCCCCTAATTGATTCGG+TGG - chr1_3:47288444-47288463 None:intergenic 40.0%
AAGCTGGCCATTAATGATCA+AGG + chr1_3:47288656-47288675 Msa0121470:CDS 40.0%
TGGCCATTAATGATCAAGGT+TGG + chr1_3:47288660-47288679 Msa0121470:CDS 40.0%
! AAAGGGGCAACTATTTGTTG+TGG + chr1_3:47288715-47288734 Msa0121470:CDS 40.0%
CATCCTGAAATTTCTGATGC+CGG + chr1_3:47289063-47289082 Msa0121470:CDS 40.0%
ATCCTGAAATTTCTGATGCC+GGG + chr1_3:47289064-47289083 Msa0121470:CDS 40.0%
GTCACGGATAAAAACGAATG+TGG - chr1_3:47289407-47289426 None:intergenic 40.0%
!! TCGTTTTTATCCGTGACAAG+TGG + chr1_3:47289410-47289429 Msa0121470:intron 40.0%
! CGTTTTTATCCGTGACAAGT+GGG + chr1_3:47289411-47289430 Msa0121470:intron 40.0%
CTCCGCTATAATGATGCTTT+GGG - chr1_3:47289599-47289618 None:intergenic 40.0%
TCTCCGCTATAATGATGCTT+TGG - chr1_3:47289600-47289619 None:intergenic 40.0%
! CCCTCTTTAGGGAAATTATG+AGG - chr1_3:47289687-47289706 None:intergenic 40.0%
AGGTGAAATCTCCCTCTTTA+GGG - chr1_3:47289698-47289717 None:intergenic 40.0%
AAGGTGAAATCTCCCTCTTT+AGG - chr1_3:47289699-47289718 None:intergenic 40.0%
TAGCCACTTACTCTAGTAGT+CGG + chr1_3:47289756-47289775 Msa0121470:intron 40.0%
! TTACCGACTACTAGAGTAAG+TGG - chr1_3:47289762-47289781 None:intergenic 40.0%
TGCATCACTTTCTTTGTACG+GGG - chr1_3:47290102-47290121 None:intergenic 40.0%
! GGGCTCTCTTTTATCCTTAA+AGG - chr1_3:47290293-47290312 None:intergenic 40.0%
AAGCCAAAAAGATCAGACGT+GGG + chr1_3:47290429-47290448 Msa0121470:intron 40.0%
! GGTTATCCCTTCTCTTGTTT+GGG - chr1_3:47290635-47290654 None:intergenic 40.0%
TGGTTATCCCTTCTCTTGTT+TGG - chr1_3:47290636-47290655 None:intergenic 40.0%
! TCAGACCATTTTATCCGGTT+TGG - chr1_3:47290847-47290866 None:intergenic 40.0%
!!! TTCTTTTTTTGTGGTGGCTG+AGG + chr1_3:47291420-47291439 Msa0121470:intron 40.0%
CTACAAAATCTTCTTCGGTG+GGG - chr1_3:47291723-47291742 None:intergenic 40.0%
TACTTAGGCCATCTACAATG+GGG + chr1_3:47292062-47292081 Msa0121470:intron 40.0%
ATGAAGGTGAGTGCTTGTAT+AGG + chr1_3:47292153-47292172 Msa0121470:intron 40.0%
CTTGAGTAATAGGAGAGAGA+GGG - chr1_3:47292181-47292200 None:intergenic 40.0%
CTCTCTCTCCTATTACTCAA+GGG + chr1_3:47292180-47292199 Msa0121470:intron 40.0%
AAACGAATGACGTGTACAGT+CGG + chr1_3:47292612-47292631 Msa0121470:intron 40.0%
CCTCATTTGGGTGCTTAAAT+GGG - chr1_3:47292640-47292659 None:intergenic 40.0%
ACCTCATTTGGGTGCTTAAA+TGG - chr1_3:47292641-47292660 None:intergenic 40.0%
AAATGTAAGCGTACGAAGGT+TGG + chr1_3:47292723-47292742 Msa0121470:intron 40.0%
TCTAGGTTGCACCATACAAA+AGG + chr1_3:47292780-47292799 Msa0121470:intron 40.0%
AAGATTCCAAAGTTAGCCAC+AGG + chr1_3:47292827-47292846 Msa0121470:CDS 40.0%
ATCTTTCCTGTGGCTAACTT+TGG - chr1_3:47292836-47292855 None:intergenic 40.0%
!! TTTAGTGAGTTGATGCACGA+TGG + chr1_3:47293093-47293112 Msa0121470:three_prime_UTR 40.0%
ATTGGAAGAGGAAGGAGGTT+GGG - chr1_3:47285137-47285156 None:intergenic 45.0%
! AGACATGGATTTTGAGCTGG+CGG - chr1_3:47285224-47285243 None:intergenic 45.0%
ACAGGGAAGCGAATAGAGTT+AGG - chr1_3:47285312-47285331 None:intergenic 45.0%
! GAGGGTGTATAAAGGACTAC+TGG - chr1_3:47285376-47285395 None:intergenic 45.0%
! AGTTCGGAGAGGGTGTATAA+AGG - chr1_3:47285384-47285403 None:intergenic 45.0%
TTGTCTAGAGAGTTCGGAGA+GGG - chr1_3:47285394-47285413 None:intergenic 45.0%
TTTGTCTAGAGAGTTCGGAG+AGG - chr1_3:47285395-47285414 None:intergenic 45.0%
TGAGACACATCTCTGTTCAC+CGG - chr1_3:47285594-47285613 None:intergenic 45.0%
TCTTTACTCTTCAGGCACCA+CGG + chr1_3:47285632-47285651 Msa0121470:CDS 45.0%
AAACCATTTGCAGCCTTTCG+AGG + chr1_3:47286102-47286121 Msa0121470:intron 45.0%
!! TTGATTTGGTCTTGTGGCCA+TGG + chr1_3:47286527-47286546 Msa0121470:intron 45.0%
! GGGACACTCTCTTTTTAACG+AGG - chr1_3:47286560-47286579 None:intergenic 45.0%
CATTCACTCTCTATGACCTC+GGG - chr1_3:47288119-47288138 None:intergenic 45.0%
TGATAATTGTGGCAGGGGTA+TGG + chr1_3:47288282-47288301 Msa0121470:intron 45.0%
TATGGCATGACTGAAGCATG+TGG + chr1_3:47288300-47288319 Msa0121470:CDS 45.0%
!! CCTAATTGATTCGGTGGAAG+GGG - chr1_3:47288438-47288457 None:intergenic 45.0%
!! CCCTAATTGATTCGGTGGAA+GGG - chr1_3:47288439-47288458 None:intergenic 45.0%
CCCTTCCACCGAATCAATTA+GGG + chr1_3:47288436-47288455 Msa0121470:CDS 45.0%
CCTTCCACCGAATCAATTAG+GGG + chr1_3:47288437-47288456 Msa0121470:CDS 45.0%
TTAGGGGAAATTTGGCTACG+AGG + chr1_3:47288453-47288472 Msa0121470:CDS 45.0%
CGAGGACCTACTATAATGCA+AGG + chr1_3:47288471-47288490 Msa0121470:CDS 45.0%
CAATCCAGAAGCAACAAAGC+TGG + chr1_3:47288640-47288659 Msa0121470:CDS 45.0%
GATCAAGGTTGGATGAGTAC+AGG + chr1_3:47288671-47288690 Msa0121470:CDS 45.0%
TGGATGAGTACAGGAGATCT+TGG + chr1_3:47288680-47288699 Msa0121470:CDS 45.0%
TCCTGAAATTTCTGATGCCG+GGG + chr1_3:47289065-47289084 Msa0121470:CDS 45.0%
TATGACTTACGGAATCACCC+CGG - chr1_3:47289085-47289104 None:intergenic 45.0%
!! AACCTCGCCAACTTTAGGAT+CGG - chr1_3:47289217-47289236 None:intergenic 45.0%
GGAGTTCAGACCTAATCAGT+GGG + chr1_3:47289432-47289451 Msa0121470:intron 45.0%
! TCAGACCTAATCAGTGGGTT+CGG + chr1_3:47289437-47289456 Msa0121470:intron 45.0%
AAGAGGGAGATTTCACCTTG+AGG + chr1_3:47289700-47289719 Msa0121470:intron 45.0%
!!! TGATCTTTTTGGCTTCCCTC+GGG - chr1_3:47290424-47290443 None:intergenic 45.0%
!!! CTGATCTTTTTGGCTTCCCT+CGG - chr1_3:47290425-47290444 None:intergenic 45.0%
GAAGCCAAAAAGATCAGACG+TGG + chr1_3:47290428-47290447 Msa0121470:intron 45.0%
GTGTGCAATCGTAACGAACT+TGG - chr1_3:47290456-47290475 None:intergenic 45.0%
! GTGCAATGCTACTTGGTTGA+CGG - chr1_3:47291198-47291217 None:intergenic 45.0%
CAGTAGTGTGCAATGCTACT+TGG - chr1_3:47291205-47291224 None:intergenic 45.0%
CAATGGTGCTTAATAGGGGA+AGG - chr1_3:47292091-47292110 None:intergenic 45.0%
CCTTGAGTAATAGGAGAGAG+AGG - chr1_3:47292182-47292201 None:intergenic 45.0%
CCTCTCTCTCCTATTACTCA+AGG + chr1_3:47292179-47292198 Msa0121470:intron 45.0%
TTTGCTTGTAGCATAGCCGT+TGG + chr1_3:47292335-47292354 Msa0121470:intron 45.0%
AACGAATGACGTGTACAGTC+GGG + chr1_3:47292613-47292632 Msa0121470:intron 45.0%
CCCATTTAAGCACCCAAATG+AGG + chr1_3:47292637-47292656 Msa0121470:intron 45.0%
CACAATGCAGCACCTCATTT+GGG - chr1_3:47292652-47292671 None:intergenic 45.0%
TCACAATGCAGCACCTCATT+TGG - chr1_3:47292653-47292672 None:intergenic 45.0%
!! AATGAGGTGCTGCATTGTGA+TGG + chr1_3:47292653-47292672 Msa0121470:intron 45.0%
GTATGGTGCAACCTAGACAA+AGG - chr1_3:47292777-47292796 None:intergenic 45.0%
! ACACGCCGTAACCTTTTGTA+TGG - chr1_3:47292794-47292813 None:intergenic 45.0%
!!! TTTTATTATAATTCATATAA+TGG - chr1_3:47286998-47287017 None:intergenic 5.0%
!!! TTTATAATTGATATTTTTTT+AGG + chr1_3:47288608-47288627 Msa0121470:intron 5.0%
!! GTAATATAAAAATTAAAAAT+TGG - chr1_3:47291264-47291283 None:intergenic 5.0%
!!! ACAATTTTTAATAAATTTAT+CGG + chr1_3:47291858-47291877 Msa0121470:intron 5.0%
!! GTTGATGGGTTGTCTTGGTG+AGG - chr1_3:47285091-47285110 None:intergenic 50.0%
!! GGAAGGTTGATGGGTTGTCT+TGG - chr1_3:47285096-47285115 None:intergenic 50.0%
! GGATCAGTGGGAAGGTTGAT+GGG - chr1_3:47285105-47285124 None:intergenic 50.0%
TTGGAAGAGGAAGGAGGTTG+GGG - chr1_3:47285136-47285155 None:intergenic 50.0%
GATTGGAAGAGGAAGGAGGT+TGG - chr1_3:47285138-47285157 None:intergenic 50.0%
!! AGTGGATTGGAAGAGGAAGG+AGG - chr1_3:47285142-47285161 None:intergenic 50.0%
!! GGAAGTGGATTGGAAGAGGA+AGG - chr1_3:47285145-47285164 None:intergenic 50.0%
TTTGAGCTGGCGGAAGGTAA+GGG - chr1_3:47285214-47285233 None:intergenic 50.0%
! TTTTGAGCTGGCGGAAGGTA+AGG - chr1_3:47285215-47285234 None:intergenic 50.0%
! ATGGATTTTGAGCTGGCGGA+AGG - chr1_3:47285220-47285239 None:intergenic 50.0%
! CGGAGACATGGATTTTGAGC+TGG - chr1_3:47285227-47285246 None:intergenic 50.0%
AAGTAAAGAGTGGGAGAGGG+CGG - chr1_3:47285247-47285266 None:intergenic 50.0%
GCGAAGTAAAGAGTGGGAGA+GGG - chr1_3:47285250-47285269 None:intergenic 50.0%
TCCCACTCTTTACTTCGCCT+CGG + chr1_3:47285252-47285271 Msa0121470:CDS 50.0%
TCCGAGGCGAAGTAAAGAGT+GGG - chr1_3:47285256-47285275 None:intergenic 50.0%
TTCCGAGGCGAAGTAAAGAG+TGG - chr1_3:47285257-47285276 None:intergenic 50.0%
! GGTAGTGGCAATAGCACCTA+TGG - chr1_3:47285355-47285374 None:intergenic 50.0%
AGATGTGTCTCAATCCGACG+TGG + chr1_3:47285602-47285621 Msa0121470:CDS 50.0%
GCGGCGATTCTTTACTCTTC+AGG + chr1_3:47285624-47285643 Msa0121470:CDS 50.0%
CTTTACTCTTCAGGCACCAC+GGG + chr1_3:47285633-47285652 Msa0121470:CDS 50.0%
TTTACTCTTCAGGCACCACG+GGG + chr1_3:47285634-47285653 Msa0121470:CDS 50.0%
TTAATAGCTACGGCGGTAGC+AGG + chr1_3:47285690-47285709 Msa0121470:CDS 50.0%
GCAGTGGATCAAGACCAGAA+CGG + chr1_3:47285714-47285733 Msa0121470:CDS 50.0%
GCATTTGTATGTTGCTCCGC+CGG + chr1_3:47285899-47285918 Msa0121470:CDS 50.0%
TTGATCAGCTCCACCATGAC+CGG - chr1_3:47285921-47285940 None:intergenic 50.0%
! TCATGGTGGAGCTGATCAAG+CGG + chr1_3:47285922-47285941 Msa0121470:CDS 50.0%
! GTTGTCGTCGCTGAAGTATC+TGG + chr1_3:47285968-47285987 Msa0121470:CDS 50.0%
! TCGTCGCTGAAGTATCTGGT+CGG + chr1_3:47285972-47285991 Msa0121470:CDS 50.0%
TCCTCGTGTCAACGTCATTC+AGG + chr1_3:47286046-47286065 Msa0121470:CDS 50.0%
ACCTGAATGACGTTGACACG+AGG - chr1_3:47286050-47286069 None:intergenic 50.0%
ATGCCTCGAAAGGCTGCAAA+TGG - chr1_3:47286108-47286127 None:intergenic 50.0%
GAAAGATGCTCGGCTCTGTT+TGG + chr1_3:47287072-47287091 Msa0121470:intron 50.0%
GTGTTTACCAAACAGACCCG+AGG + chr1_3:47288100-47288119 Msa0121470:intron 50.0%
TCTATGACCTCGGGTCTGTT+TGG - chr1_3:47288110-47288129 None:intergenic 50.0%
CCCCTTCCACCGAATCAATT+AGG + chr1_3:47288435-47288454 Msa0121470:CDS 50.0%
!! CCCCTAATTGATTCGGTGGA+AGG - chr1_3:47288440-47288459 None:intergenic 50.0%
!! ATGGCCAGCTTTGTTGCTTC+TGG - chr1_3:47288647-47288666 None:intergenic 50.0%
AACAAGTCTTCGAGCTCAGC+TGG - chr1_3:47289036-47289055 None:intergenic 50.0%
AGCTGAGCTCGAAGACTTGT+TGG + chr1_3:47289035-47289054 Msa0121470:CDS 50.0%
ACCCCGGCATCAGAAATTTC+AGG - chr1_3:47289069-47289088 None:intergenic 50.0%
AGATCCCCCGATCCTAAAGT+TGG + chr1_3:47289207-47289226 Msa0121470:intron 50.0%
!! ACCTCGCCAACTTTAGGATC+GGG - chr1_3:47289216-47289235 None:intergenic 50.0%
TCCTAAAGTTGGCGAGGTTC+CGG + chr1_3:47289218-47289237 Msa0121470:CDS 50.0%
GAGCGAACAACAAAAGCCAC+CGG - chr1_3:47289240-47289259 None:intergenic 50.0%
GTCTGAACTCCCACTTGTCA+CGG - chr1_3:47289423-47289442 None:intergenic 50.0%
GGGAGTTCAGACCTAATCAG+TGG + chr1_3:47289431-47289450 Msa0121470:intron 50.0%
! CAGACCTAATCAGTGGGTTC+GGG + chr1_3:47289438-47289457 Msa0121470:intron 50.0%
! AGACCTAATCAGTGGGTTCG+GGG + chr1_3:47289439-47289458 Msa0121470:intron 50.0%
! GGACCCACGTCTGATCTTTT+TGG - chr1_3:47290435-47290454 None:intergenic 50.0%
CGGAATCGTGCAAATCTAGC+TGG - chr1_3:47291239-47291258 None:intergenic 50.0%
GAAGGACTCCCCATTGTAGA+TGG - chr1_3:47292073-47292092 None:intergenic 50.0%
ATGTGGGGCCCTTGAGTAAT+AGG - chr1_3:47292191-47292210 None:intergenic 50.0%
!! AGGTGCTGGGTTGAAGAGAT+TGG + chr1_3:47292566-47292585 Msa0121470:intron 50.0%
! GGTGCTGGGTTGAAGAGATT+GGG + chr1_3:47292567-47292586 Msa0121470:intron 50.0%
GGGATCAGTGGGAAGGTTGA+TGG - chr1_3:47285106-47285125 None:intergenic 55.0%
AGAGGTTGGGATCAGTGGGA+AGG - chr1_3:47285113-47285132 None:intergenic 55.0%
AAGGAGGTTGGGGAGAGGTT+GGG - chr1_3:47285126-47285145 None:intergenic 55.0%
!! CGGAGGAAGTGGATTGGAAG+AGG - chr1_3:47285149-47285168 None:intergenic 55.0%
GGATTCACCGGAGTGTGCAT+CGG - chr1_3:47285193-47285212 None:intergenic 55.0%
GCGGAAGGTAAGGGATTCAC+CGG - chr1_3:47285205-47285224 None:intergenic 55.0%
GGCGAAGTAAAGAGTGGGAG+AGG - chr1_3:47285251-47285270 None:intergenic 55.0%
CTTCGCCTCGGAATCAAACG+AGG + chr1_3:47285264-47285283 Msa0121470:CDS 55.0%
TGTGTCTCAATCCGACGTGG+CGG + chr1_3:47285605-47285624 Msa0121470:CDS 55.0%
GTAAAGAATCGCCGCCACGT+CGG - chr1_3:47285619-47285638 None:intergenic 55.0%
GATCAAGACCAGAACGGCGA+GGG + chr1_3:47285720-47285739 Msa0121470:CDS 55.0%
ATCAAGACCAGAACGGCGAG+GGG + chr1_3:47285721-47285740 Msa0121470:CDS 55.0%
TGTGCCAATGCACCACGTGA+TGG + chr1_3:47285764-47285783 Msa0121470:CDS 55.0%
GTGCCAATGCACCACGTGAT+GGG + chr1_3:47285765-47285784 Msa0121470:CDS 55.0%
TGCCAATGCACCACGTGATG+GGG + chr1_3:47285766-47285785 Msa0121470:CDS 55.0%
AACCCCATCACGTGGTGCAT+TGG - chr1_3:47285771-47285790 None:intergenic 55.0%
! AATGCACCACGTGATGGGGT+TGG + chr1_3:47285770-47285789 Msa0121470:CDS 55.0%
GGATAACGTACACGCAGCTG+CGG + chr1_3:47285796-47285815 Msa0121470:CDS 55.0%
! GGAGAAGATTTTTGCGGCGG+TGG + chr1_3:47285860-47285879 Msa0121470:CDS 55.0%
! AGATTTTTGCGGCGGTGGAG+AGG + chr1_3:47285865-47285884 Msa0121470:CDS 55.0%
AAGCGGCGTGACGTTGTTAG+CGG + chr1_3:47285939-47285958 Msa0121470:CDS 55.0%
! TCGCTGAAGTATCTGGTCGG+TGG + chr1_3:47285975-47285994 Msa0121470:CDS 55.0%
!! CTCGCCAACTTTAGGATCGG+GGG - chr1_3:47289214-47289233 None:intergenic 55.0%
!! CCTCGCCAACTTTAGGATCG+GGG - chr1_3:47289215-47289234 None:intergenic 55.0%
ACCGGAACCTCGCCAACTTT+AGG - chr1_3:47289222-47289241 None:intergenic 55.0%
TAAAGTTGGCGAGGTTCCGG+TGG + chr1_3:47289221-47289240 Msa0121470:CDS 55.0%
GGGGAGAGGTTGGGATCAGT+GGG - chr1_3:47285117-47285136 None:intergenic 60.0%
TGGGGAGAGGTTGGGATCAG+TGG - chr1_3:47285118-47285137 None:intergenic 60.0%
GAAGGAGGTTGGGGAGAGGT+TGG - chr1_3:47285127-47285146 None:intergenic 60.0%
AGAGGAAGGAGGTTGGGGAG+AGG - chr1_3:47285131-47285150 None:intergenic 60.0%
CCTCGCCTCGTTTGATTCCG+AGG - chr1_3:47285272-47285291 None:intergenic 60.0%
CCTCGGAATCAAACGAGGCG+AGG + chr1_3:47285269-47285288 Msa0121470:CDS 60.0%
CGGAATCAAACGAGGCGAGG+TGG + chr1_3:47285272-47285291 Msa0121470:CDS 60.0%
GGATCAAGACCAGAACGGCG+AGG + chr1_3:47285719-47285738 Msa0121470:CDS 60.0%
! CACCACGTGATGGGGTTGGT+GGG + chr1_3:47285774-47285793 Msa0121470:CDS 60.0%
!! ACCACGTGATGGGGTTGGTG+GGG + chr1_3:47285775-47285794 Msa0121470:CDS 60.0%
! AGGGAACACGGTGGTGTCGA+TGG + chr1_3:47285821-47285840 Msa0121470:CDS 60.0%
!! GGGAACACGGTGGTGTCGAT+GGG + chr1_3:47285822-47285841 Msa0121470:CDS 60.0%
!! AACACGGTGGTGTCGATGGG+TGG + chr1_3:47285825-47285844 Msa0121470:CDS 60.0%
GTATGTTGCTCCGCCGGTCA+TGG + chr1_3:47285905-47285924 Msa0121470:CDS 60.0%
ATCAGCTCCACCATGACCGG+CGG - chr1_3:47285918-47285937 None:intergenic 60.0%
CCCCGATCCTAAAGTTGGCG+AGG + chr1_3:47289212-47289231 Msa0121470:CDS 60.0%
! GCACCCCGAACCCACTGATT+AGG - chr1_3:47289445-47289464 None:intergenic 60.0%
! ATCAGTGGGTTCGGGGTGCT+TGG + chr1_3:47289446-47289465 Msa0121470:intron 60.0%
!! GAAATGCAGGGTTGGCCCTG+AGG - chr1_3:47289472-47289491 None:intergenic 60.0%
CGGCGACGGAGGAAGTGGAT+TGG - chr1_3:47285155-47285174 None:intergenic 65.0%
ATCGGCGAGGGCGATGGTGT+CGG - chr1_3:47285175-47285194 None:intergenic 65.0%
! ACCGGAGTGTGCATCGGCGA+GGG - chr1_3:47285187-47285206 None:intergenic 65.0%
AGTGGGAGAGGGCGGAGACA+TGG - chr1_3:47285239-47285258 None:intergenic 65.0%
AGGCACCACGGGGAGAAGCA+AGG + chr1_3:47285644-47285663 Msa0121470:CDS 65.0%
GGCACCACGGGGAGAAGCAA+GGG + chr1_3:47285645-47285664 Msa0121470:CDS 65.0%
CACTCCCTTGCTTCTCCCCG+TGG - chr1_3:47285652-47285671 None:intergenic 65.0%
TACGGCGGTAGCAGGAGCAG+TGG + chr1_3:47285698-47285717 Msa0121470:CDS 65.0%
CGTTCTTCCCCTCGCCGTTC+TGG - chr1_3:47285731-47285750 None:intergenic 65.0%
! GCACCACGTGATGGGGTTGG+TGG + chr1_3:47285773-47285792 Msa0121470:CDS 65.0%
TCCCCACCAACCCCATCACG+TGG - chr1_3:47285779-47285798 None:intergenic 65.0%
ACGTACACGCAGCTGCGGAG+AGG + chr1_3:47285801-47285820 Msa0121470:CDS 65.0%
CGTACACGCAGCTGCGGAGA+GGG + chr1_3:47285802-47285821 Msa0121470:CDS 65.0%
GCAGCTGCGGAGAGGGAACA+CGG + chr1_3:47285809-47285828 Msa0121470:CDS 65.0%
TGTTGCTCCGCCGGTCATGG+TGG + chr1_3:47285908-47285927 Msa0121470:CDS 65.0%
!! GTCGGTGGTGCTGCTCCGTT+GGG + chr1_3:47285990-47286009 Msa0121470:CDS 65.0%
!! TCGGTGGTGCTGCTCCGTTG+GGG + chr1_3:47285991-47286010 Msa0121470:CDS 65.0%
! GTTCGGGGTGCTTGGCCTCA+GGG + chr1_3:47289454-47289473 Msa0121470:intron 65.0%
!! GGTGTCGGCGACGGAGGAAG+TGG - chr1_3:47285160-47285179 None:intergenic 70.0%
!! GAGGGCGATGGTGTCGGCGA+CGG - chr1_3:47285169-47285188 None:intergenic 70.0%
! GTGTGCATCGGCGAGGGCGA+TGG - chr1_3:47285181-47285200 None:intergenic 70.0%
GCCCTCGCCGATGCACACTC+CGG + chr1_3:47285183-47285202 Msa0121470:CDS 70.0%
! CACCGGAGTGTGCATCGGCG+AGG - chr1_3:47285188-47285207 None:intergenic 70.0%
GCTGCGGAGAGGGAACACGG+TGG + chr1_3:47285812-47285831 Msa0121470:CDS 70.0%
!! GGTCGGTGGTGCTGCTCCGT+TGG + chr1_3:47285989-47286008 Msa0121470:CDS 70.0%
! GGTTCGGGGTGCTTGGCCTC+AGG + chr1_3:47289453-47289472 Msa0121470:intron 70.0%
!! GGCGATGGTGTCGGCGACGG+AGG - chr1_3:47285166-47285185 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 47285048 47293118 47285048 ID=Msa0121470;Name=Msa0121470
chr1_3 mRNA 47285048 47293118 47285048 ID=Msa0121470-mRNA-1;Parent=Msa0121470;Name=Msa0121470-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0.83|1|1|1|6|211|551
chr1_3 exon 47285048 47286067 47285048 ID=Msa0121470-mRNA-1:exon:14284;Parent=Msa0121470-mRNA-1
chr1_3 exon 47288297 47288492 47288297 ID=Msa0121470-mRNA-1:exon:14285;Parent=Msa0121470-mRNA-1
chr1_3 exon 47288630 47288775 47288630 ID=Msa0121470-mRNA-1:exon:14286;Parent=Msa0121470-mRNA-1
chr1_3 exon 47289027 47289094 47289027 ID=Msa0121470-mRNA-1:exon:14287;Parent=Msa0121470-mRNA-1
chr1_3 exon 47289209 47289311 47289209 ID=Msa0121470-mRNA-1:exon:14288;Parent=Msa0121470-mRNA-1
chr1_3 exon 47292785 47293118 47292785 ID=Msa0121470-mRNA-1:exon:14289;Parent=Msa0121470-mRNA-1
chr1_3 CDS 47285048 47286067 47285048 ID=Msa0121470-mRNA-1:cds;Parent=Msa0121470-mRNA-1
chr1_3 CDS 47288297 47288492 47288297 ID=Msa0121470-mRNA-1:cds;Parent=Msa0121470-mRNA-1
chr1_3 CDS 47288630 47288775 47288630 ID=Msa0121470-mRNA-1:cds;Parent=Msa0121470-mRNA-1
chr1_3 CDS 47289027 47289094 47289027 ID=Msa0121470-mRNA-1:cds;Parent=Msa0121470-mRNA-1
chr1_3 CDS 47289209 47289311 47289209 ID=Msa0121470-mRNA-1:cds;Parent=Msa0121470-mRNA-1
chr1_3 CDS 47292785 47292907 47292785 ID=Msa0121470-mRNA-1:cds;Parent=Msa0121470-mRNA-1
chr1_3 three_prime_UTR 47292908 47293118 47292908 ID=Msa0121470-mRNA-1:three_prime_utr;Parent=Msa0121470-mRNA-1
Gene Sequence

>Msa0121470

ATGGCGAAAAGTTGCTTCAACCTCAAAACAATGACGTATTCCTCACCAAGACAACCCATCAACCTTCCCACTGATCCCAACCTCTCCCCAACCTCCTTCCTCTTCCAATCCACTTCCTCCGTCGCCGACACCATCGCCCTCGCCGATGCACACTCCGGTGAATCCCTTACCTTCCGCCAGCTCAAAATCCATGTCTCCGCCCTCTCCCACTCTTTACTTCGCCTCGGAATCAAACGAGGCGAGGTGGTTTTGCTATTAGCACCTAACTCTATTCGCTTCCCTGTTTGCTTTCTAGCTATAGTTGCCATAGGTGCTATTGCCACTACCAGTAGTCCTTTATACACCCTCTCCGAACTCTCTAGACAAATACATGACTCCAAGCCCAAGCTTGTTATAACTGTATCTGAACTCTTCAAGAAAATTGAAGCATTGACCTTAGGTTTACCATTAATATTCCTTGACGAACCTTCTAAGAAGTTTGGTCCTAGGGTTTCAAACTATGAGGATCTGATCAGAGAGTCATACAATAGTTCCGATGATATTCCGGTGAACAGAGATGTGTCTCAATCCGACGTGGCGGCGATTCTTTACTCTTCAGGCACCACGGGGAGAAGCAAGGGAGTGATGCTAACTCATAAAAACTTAATAGCTACGGCGGTAGCAGGAGCAGTGGATCAAGACCAGAACGGCGAGGGGAAGAACGTGTTTGTATGTTTTGTGCCAATGCACCACGTGATGGGGTTGGTGGGGATAACGTACACGCAGCTGCGGAGAGGGAACACGGTGGTGTCGATGGGTGGTAGATTTGATTTGGAGAAGATTTTTGCGGCGGTGGAGAGGTTTAAAGTGACGCATTTGTATGTTGCTCCGCCGGTCATGGTGGAGCTGATCAAGCGGCGTGACGTTGTTAGCGGTTACGAGTTGTCGTCGCTGAAGTATCTGGTCGGTGGTGCTGCTCCGTTGGGGAAAGATTTGATGCAAGAATGTATTAAGATTCTTCCTCGTGTCAACGTCATTCAGGGGTATGGCATGACTGAAGCATGTGGACTTGTTTCCATAGAAAATCCAAAGGAAGGAAATCTCCTTTCAGTTTCTGGTTCAACTGGAACACTAATTCCAAGTGTAGAATCTCGTATAGTTAATTTGGCAACATTGAAGCCCCTTCCACCGAATCAATTAGGGGAAATTTGGCTACGAGGACCTACTATAATGCAAGGATACTTTAACAATCCAGAAGCAACAAAGCTGGCCATTAATGATCAAGGTTGGATGAGTACAGGAGATCTTGGATATTTTGATGAAAAGGGGCAACTATTTGTTGTGGATCGAATAAAAGAGCTCATCAAATGTAGTGGTTATCAAGTCGCGCCAGCTGAGCTCGAAGACTTGTTGGTTTCTCATCCTGAAATTTCTGATGCCGGGGTGATTCCATCCCCCGATCCTAAAGTTGGCGAGGTTCCGGTGGCTTTTGTTGTTCGCTCGCCCAATAGCTCCATAACCAAAGAAGATATTCAAAAGTTTGTAGCAAAACAGGTTGCACCATACAAAAGGTTACGGCGTGTGACTTTTTTAGAGAAGATTCCAAAGTTAGCCACAGGAAAGATCTTAAGAAAGGATCTCGTAAGTTTTGATCGACAAAATATATCAAAGTTATAG
Protein sequence

>Msa0121470

MAKSCFNLKTMTYSSPRQPINLPTDPNLSPTSFLFQSTSSVADTIALADAHSGESLTFRQLKIHVSALSHSLLRLGIKRGEVVLLLAPNSIRFPVCFLAIVAIGAIATTSSPLYTLSELSRQIHDSKPKLVITVSELFKKIEALTLGLPLIFLDEPSKKFGPRVSNYEDLIRESYNSSDDIPVNRDVSQSDVAAILYSSGTTGRSKGVMLTHKNLIATAVAGAVDQDQNGEGKNVFVCFVPMHHVMGLVGITYTQLRRGNTVVSMGGRFDLEKIFAAVERFKVTHLYVAPPVMVELIKRRDVVSGYELSSLKYLVGGAAPLGKDLMQECIKILPRVNVIQGYGMTEACGLVSIENPKEGNLLSVSGSTGTLIPSVESRIVNLATLKPLPPNQLGEIWLRGPTIMQGYFNNPEATKLAINDQGWMSTGDLGYFDEKGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDPKVGEVPVAFVVRSPNSSITKEDIQKFVAKQVAPYKRLRRVTFLEKIPKLATGKILRKDLVSFDRQNISKL*