Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0555910 | XP_003607708.1 | 96.437 | 449 | 3 | 3 | 1 | 448 | 1 | 437 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0555910 | G7JF39 | 96.437 | 449 | 3 | 3 | 1 | 448 | 1 | 437 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0555910 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0555910 | 0.813182 | 2.913800e-51 | -8.615850e-47 |
| Msa0004360 | Msa0555910 | 0.806624 | 7.516805e-50 | -8.615850e-47 |
| Msa0005050 | Msa0555910 | 0.826039 | 3.374829e-54 | -8.615850e-47 |
| Msa0009760 | Msa0555910 | 0.801709 | 7.923243e-49 | -8.615850e-47 |
| Msa0016670 | Msa0555910 | 0.881768 | 1.823659e-70 | -8.615850e-47 |
| Msa0017510 | Msa0555910 | 0.800916 | 1.151465e-48 | -8.615850e-47 |
| Msa0032370 | Msa0555910 | 0.807408 | 5.128932e-50 | -8.615850e-47 |
| Msa0032840 | Msa0555910 | -0.849920 | 2.371661e-60 | -8.615850e-47 |
| Msa0036430 | Msa0555910 | 0.831896 | 1.287413e-55 | -8.615850e-47 |
| Msa0043670 | Msa0555910 | -0.808854 | 2.523811e-50 | -8.615850e-47 |
| Msa0044020 | Msa0555910 | 0.840547 | 8.144654e-58 | -8.615850e-47 |
| Msa0052610 | Msa0555910 | 0.808022 | 3.799324e-50 | -8.615850e-47 |
| Msa0053110 | Msa0555910 | 0.838119 | 3.474333e-57 | -8.615850e-47 |
| Msa0072810 | Msa0555910 | 0.830356 | 3.075157e-55 | -8.615850e-47 |
| Msa0073670 | Msa0555910 | 0.839900 | 1.201737e-57 | -8.615850e-47 |
| Msa0074320 | Msa0555910 | 0.821962 | 3.054083e-53 | -8.615850e-47 |
| Msa0081360 | Msa0555910 | 0.816685 | 4.868760e-52 | -8.615850e-47 |
| Msa0081480 | Msa0555910 | 0.806841 | 6.761189e-50 | -8.615850e-47 |
| Msa0082280 | Msa0555910 | 0.804738 | 1.870585e-49 | -8.615850e-47 |
| Msa0083920 | Msa0555910 | 0.801543 | 8.570214e-49 | -8.615850e-47 |
| Msa0089200 | Msa0555910 | 0.802830 | 4.656403e-49 | -8.615850e-47 |
| Msa0090590 | Msa0555910 | 0.827778 | 1.296435e-54 | -8.615850e-47 |
| Msa0092690 | Msa0555910 | -0.802740 | 4.859483e-49 | -8.615850e-47 |
| Msa0092740 | Msa0555910 | -0.821166 | 4.663962e-53 | -8.615850e-47 |
| Msa0094120 | Msa0555910 | 0.804048 | 2.604682e-49 | -8.615850e-47 |
| Msa0097850 | Msa0555910 | 0.801088 | 1.061788e-48 | -8.615850e-47 |
| Msa0098440 | Msa0555910 | 0.820654 | 6.119182e-53 | -8.615850e-47 |
| Msa0103000 | Msa0555910 | 0.833346 | 5.621113e-56 | -8.615850e-47 |
| Msa0110360 | Msa0555910 | 0.831526 | 1.587963e-55 | -8.615850e-47 |
| Msa0110970 | Msa0555910 | 0.845198 | 4.716272e-59 | -8.615850e-47 |
| Msa0114540 | Msa0555910 | -0.835878 | 1.298578e-56 | -8.615850e-47 |
| Msa0115160 | Msa0555910 | 0.858959 | 5.757998e-63 | -8.615850e-47 |
| Msa0118570 | Msa0555910 | 0.819456 | 1.150590e-52 | -8.615850e-47 |
| Msa0120330 | Msa0555910 | 0.816984 | 4.171110e-52 | -8.615850e-47 |
| Msa0124340 | Msa0555910 | 0.841594 | 4.322286e-58 | -8.615850e-47 |
| Msa0127820 | Msa0555910 | 0.807022 | 6.190421e-50 | -8.615850e-47 |
| Msa0128860 | Msa0555910 | 0.813874 | 2.052092e-51 | -8.615850e-47 |
| Msa0130570 | Msa0555910 | 0.815169 | 1.061159e-51 | -8.615850e-47 |
| Msa0134180 | Msa0555910 | 0.846201 | 2.520526e-59 | -8.615850e-47 |
| Msa0137610 | Msa0555910 | -0.825505 | 4.520197e-54 | -8.615850e-47 |
| Msa0140570 | Msa0555910 | 0.801412 | 9.116558e-49 | -8.615850e-47 |
| Msa0140960 | Msa0555910 | 0.802533 | 5.362100e-49 | -8.615850e-47 |
| Msa0147560 | Msa0555910 | 0.821337 | 4.260874e-53 | -8.615850e-47 |
| Msa0157290 | Msa0555910 | 0.801245 | 9.860986e-49 | -8.615850e-47 |
| Msa0167480 | Msa0555910 | 0.825509 | 4.509341e-54 | -8.615850e-47 |
| Msa0172350 | Msa0555910 | 0.818160 | 2.266196e-52 | -8.615850e-47 |
| Msa0172960 | Msa0555910 | -0.810119 | 1.350244e-50 | -8.615850e-47 |
| Msa0174730 | Msa0555910 | 0.812944 | 3.285143e-51 | -8.615850e-47 |
| Msa0174770 | Msa0555910 | 0.802540 | 5.346092e-49 | -8.615850e-47 |
| Msa0181610 | Msa0555910 | 0.807191 | 5.701730e-50 | -8.615850e-47 |
| Msa0183830 | Msa0555910 | 0.839469 | 1.555783e-57 | -8.615850e-47 |
| Msa0186890 | Msa0555910 | 0.838145 | 3.421973e-57 | -8.615850e-47 |
| Msa0187690 | Msa0555910 | 0.823112 | 1.650311e-53 | -8.615850e-47 |
| Msa0187930 | Msa0555910 | 0.829430 | 5.169372e-55 | -8.615850e-47 |
| Msa0188890 | Msa0555910 | 0.811183 | 7.951585e-51 | -8.615850e-47 |
| Msa0193120 | Msa0555910 | 0.800454 | 1.430515e-48 | -8.615850e-47 |
| Msa0194540 | Msa0555910 | 0.835424 | 1.692041e-56 | -8.615850e-47 |
| Msa0199690 | Msa0555910 | 0.805518 | 1.284156e-49 | -8.615850e-47 |
| Msa0199880 | Msa0555910 | 0.807325 | 5.342072e-50 | -8.615850e-47 |
| Msa0219190 | Msa0555910 | 0.809444 | 1.886533e-50 | -8.615850e-47 |
| Msa0222920 | Msa0555910 | 0.804183 | 2.441457e-49 | -8.615850e-47 |
| Msa0223250 | Msa0555910 | 0.806185 | 9.302250e-50 | -8.615850e-47 |
| Msa0225180 | Msa0555910 | 0.805900 | 1.067567e-49 | -8.615850e-47 |
| Msa0225740 | Msa0555910 | 0.807984 | 3.869593e-50 | -8.615850e-47 |
| Msa0230550 | Msa0555910 | -0.846930 | 1.593922e-59 | -8.615850e-47 |
| Msa0231380 | Msa0555910 | 0.804918 | 1.715326e-49 | -8.615850e-47 |
| Msa0238070 | Msa0555910 | -0.815193 | 1.047847e-51 | -8.615850e-47 |
| Msa0369050 | Msa0555910 | 0.800023 | 1.750162e-48 | -8.615850e-47 |
| Msa0375750 | Msa0555910 | 0.820702 | 5.964200e-53 | -8.615850e-47 |
| Msa0392940 | Msa0555910 | 0.818455 | 1.942744e-52 | -8.615850e-47 |
| Msa0394400 | Msa0555910 | 0.803386 | 3.573174e-49 | -8.615850e-47 |
| Msa0402330 | Msa0555910 | 0.815228 | 1.029441e-51 | -8.615850e-47 |
| Msa0410500 | Msa0555910 | 0.815497 | 8.967181e-52 | -8.615850e-47 |
| Msa0413450 | Msa0555910 | 0.807835 | 4.163277e-50 | -8.615850e-47 |
| Msa0417880 | Msa0555910 | 0.802170 | 6.370570e-49 | -8.615850e-47 |
| Msa0419820 | Msa0555910 | 0.808049 | 3.748305e-50 | -8.615850e-47 |
| Msa0423900 | Msa0555910 | 0.821857 | 3.229887e-53 | -8.615850e-47 |
| Msa0424920 | Msa0555910 | 0.810849 | 9.395211e-51 | -8.615850e-47 |
| Msa0425940 | Msa0555910 | 0.801047 | 1.082611e-48 | -8.615850e-47 |
| Msa0436280 | Msa0555910 | -0.801811 | 7.547994e-49 | -8.615850e-47 |
| Msa0441130 | Msa0555910 | 0.819638 | 1.045629e-52 | -8.615850e-47 |
| Msa0462990 | Msa0555910 | 0.803155 | 3.988922e-49 | -8.615850e-47 |
| Msa0475790 | Msa0555910 | 0.809544 | 1.795420e-50 | -8.615850e-47 |
| Msa0241780 | Msa0555910 | 0.822974 | 1.777420e-53 | -8.615850e-47 |
| Msa0241800 | Msa0555910 | 0.839950 | 1.165686e-57 | -8.615850e-47 |
| Msa0242680 | Msa0555910 | 0.809866 | 1.530844e-50 | -8.615850e-47 |
| Msa0244780 | Msa0555910 | 0.828725 | 7.665549e-55 | -8.615850e-47 |
| Msa0264350 | Msa0555910 | 0.806435 | 8.237854e-50 | -8.615850e-47 |
| Msa0264570 | Msa0555910 | 0.839691 | 1.361612e-57 | -8.615850e-47 |
| Msa0267760 | Msa0555910 | 0.819023 | 1.444061e-52 | -8.615850e-47 |
| Msa0268130 | Msa0555910 | 0.834302 | 3.243212e-56 | -8.615850e-47 |
| Msa0270660 | Msa0555910 | 0.804435 | 2.162945e-49 | -8.615850e-47 |
| Msa0277630 | Msa0555910 | 0.810257 | 1.260998e-50 | -8.615850e-47 |
| Msa0280430 | Msa0555910 | 0.812734 | 3.651648e-51 | -8.615850e-47 |
| Msa0280900 | Msa0555910 | 0.826593 | 2.491540e-54 | -8.615850e-47 |
| Msa0292400 | Msa0555910 | 0.826818 | 2.201895e-54 | -8.615850e-47 |
| Msa0294390 | Msa0555910 | 0.848168 | 7.279101e-60 | -8.615850e-47 |
| Msa0298990 | Msa0555910 | 0.827317 | 1.672702e-54 | -8.615850e-47 |
| Msa0302380 | Msa0555910 | 0.824034 | 1.004091e-53 | -8.615850e-47 |
| Msa0302450 | Msa0555910 | 0.804525 | 2.072046e-49 | -8.615850e-47 |
| Msa0316850 | Msa0555910 | 0.817521 | 3.159007e-52 | -8.615850e-47 |
| Msa0322890 | Msa0555910 | 0.800381 | 1.480569e-48 | -8.615850e-47 |
| Msa0332920 | Msa0555910 | 0.806459 | 8.143854e-50 | -8.615850e-47 |
| Msa0339640 | Msa0555910 | 0.813898 | 2.027057e-51 | -8.615850e-47 |
| Msa0355270 | Msa0555910 | 0.817605 | 3.023171e-52 | -8.615850e-47 |
| Msa0362780 | Msa0555910 | 0.814615 | 1.407451e-51 | -8.615850e-47 |
| Msa0485990 | Msa0555910 | 0.821047 | 4.968236e-53 | -8.615850e-47 |
| Msa0508590 | Msa0555910 | 0.823031 | 1.723566e-53 | -8.615850e-47 |
| Msa0508630 | Msa0555910 | 0.829183 | 5.936838e-55 | -8.615850e-47 |
| Msa0514860 | Msa0555910 | 0.803432 | 3.495837e-49 | -8.615850e-47 |
| Msa0521880 | Msa0555910 | 0.817822 | 2.701527e-52 | -8.615850e-47 |
| Msa0526540 | Msa0555910 | 0.836159 | 1.102013e-56 | -8.615850e-47 |
| Msa0526710 | Msa0555910 | 0.814097 | 1.832669e-51 | -8.615850e-47 |
| Msa0541860 | Msa0555910 | 0.837084 | 6.403080e-57 | -8.615850e-47 |
| Msa0552810 | Msa0555910 | 0.807467 | 4.983778e-50 | -8.615850e-47 |
| Msa0555910 | Msa0571920 | 0.807204 | 5.666138e-50 | -8.615850e-47 |
| Msa0555910 | Msa0574890 | 0.803710 | 3.061311e-49 | -8.615850e-47 |
| Msa0555910 | Msa0576690 | 0.818546 | 1.852307e-52 | -8.615850e-47 |
| Msa0555910 | Msa0576940 | 0.839343 | 1.677117e-57 | -8.615850e-47 |
| Msa0555910 | Msa0581070 | 0.809944 | 1.473233e-50 | -8.615850e-47 |
| Msa0555910 | Msa0609450 | 0.952813 | 1.076194e-110 | -8.615850e-47 |
| Msa0555910 | Msa0618040 | 0.823831 | 1.120916e-53 | -8.615850e-47 |
| Msa0555910 | Msa0620990 | 0.843752 | 1.154912e-58 | -8.615850e-47 |
| Msa0555910 | Msa0624510 | 0.804276 | 2.334660e-49 | -8.615850e-47 |
| Msa0555910 | Msa0625530 | -0.803543 | 3.315785e-49 | -8.615850e-47 |
| Msa0555910 | Msa0646090 | 0.801497 | 8.755861e-49 | -8.615850e-47 |
| Msa0555910 | Msa0647380 | 0.813925 | 1.999537e-51 | -8.615850e-47 |
| Msa0555910 | Msa0650090 | 0.920258 | 1.606845e-87 | -8.615850e-47 |
| Msa0555910 | Msa0677290 | 0.841908 | 3.572546e-58 | -8.615850e-47 |
| Msa0555910 | Msa0687630 | 0.817190 | 3.749004e-52 | -8.615850e-47 |
| Msa0555910 | Msa0692080 | 0.952374 | 2.778101e-110 | -8.615850e-47 |
| Msa0555910 | Msa0701280 | 0.832301 | 1.022296e-55 | -8.615850e-47 |
| Msa0555910 | Msa0702340 | 0.837488 | 5.046139e-57 | -8.615850e-47 |
| Msa0555910 | Msa0702590 | 0.838619 | 2.581853e-57 | -8.615850e-47 |
| Msa0555910 | Msa0702660 | 0.838561 | 2.673355e-57 | -8.615850e-47 |
| Msa0555910 | Msa0703230 | 0.838748 | 2.391094e-57 | -8.615850e-47 |
| Msa0555910 | Msa0738040 | 0.808165 | 3.541009e-50 | -8.615850e-47 |
| Msa0555910 | Msa0743800 | 0.803105 | 4.086313e-49 | -8.615850e-47 |
| Msa0555910 | Msa0747700 | 0.802257 | 6.111473e-49 | -8.615850e-47 |
| Msa0555910 | Msa0747780 | 0.833868 | 4.165580e-56 | -8.615850e-47 |
| Msa0555910 | Msa0754720 | -0.801671 | 8.065963e-49 | -8.615850e-47 |
| Msa0555910 | Msa0755340 | 0.811043 | 8.527270e-51 | -8.615850e-47 |
| Msa0555910 | Msa0760380 | 0.813461 | 2.530304e-51 | -8.615850e-47 |
| Msa0555910 | Msa0761580 | 0.811223 | 7.793260e-51 | -8.615850e-47 |
| Msa0555910 | Msa0778320 | 0.814531 | 1.469209e-51 | -8.615850e-47 |
| Msa0555910 | Msa0785210 | 0.810687 | 1.018302e-50 | -8.615850e-47 |
| Msa0555910 | Msa0787750 | 0.804842 | 1.778945e-49 | -8.615850e-47 |
| Msa0555910 | Msa0788770 | 0.817287 | 3.566127e-52 | -8.615850e-47 |
| Msa0555910 | Msa0790610 | 0.806829 | 6.801092e-50 | -8.615850e-47 |
| Msa0555910 | Msa0813720 | 0.802251 | 6.130463e-49 | -8.615850e-47 |
| Msa0555910 | Msa0813740 | 0.801082 | 1.064799e-48 | -8.615850e-47 |
| Msa0555910 | Msa0822990 | 0.808104 | 3.648333e-50 | -8.615850e-47 |
| Msa0555910 | Msa0824640 | 0.833300 | 5.774297e-56 | -8.615850e-47 |
| Msa0555910 | Msa0825310 | 0.824019 | 1.012699e-53 | -8.615850e-47 |
| Msa0555910 | Msa0850960 | 0.808593 | 2.869638e-50 | -8.615850e-47 |
| Msa0555910 | Msa0856050 | 0.811389 | 7.175153e-51 | -8.615850e-47 |
| Msa0555910 | Msa0862100 | 0.800845 | 1.190533e-48 | -8.615850e-47 |
| Msa0555910 | Msa0863240 | 0.807175 | 5.747974e-50 | -8.615850e-47 |
| Msa0555910 | Msa0864010 | 0.843097 | 1.727841e-58 | -8.615850e-47 |
| Msa0555910 | Msa0872310 | 0.824359 | 8.424796e-54 | -8.615850e-47 |
| Msa0555910 | Msa0880140 | 0.803428 | 3.503200e-49 | -8.615850e-47 |
| Msa0555910 | Msa0880440 | 0.807663 | 4.528830e-50 | -8.615850e-47 |
| Msa0555910 | Msa0896970 | 0.812761 | 3.603901e-51 | -8.615850e-47 |
| Msa0555910 | Msa0903330 | 0.810545 | 1.092738e-50 | -8.615850e-47 |
| Msa0555910 | Msa0905550 | 0.825830 | 3.785147e-54 | -8.615850e-47 |
| Msa0555910 | Msa0930780 | 0.839768 | 1.300830e-57 | -8.615850e-47 |
| Msa0555910 | Msa0936340 | 0.822659 | 2.104747e-53 | -8.615850e-47 |
| Msa0555910 | Msa0937550 | 0.832592 | 8.656022e-56 | -8.615850e-47 |
| Msa0555910 | Msa1012440 | 0.806081 | 9.783043e-50 | -8.615850e-47 |
| Msa0555910 | Msa1012700 | 0.841360 | 4.983003e-58 | -8.615850e-47 |
| Msa0555910 | Msa1012810 | 0.856567 | 2.948293e-62 | -8.615850e-47 |
| Msa0555910 | Msa1018790 | 0.822425 | 2.385036e-53 | -8.615850e-47 |
| Msa0555910 | Msa1019240 | 0.810577 | 1.075496e-50 | -8.615850e-47 |
| Msa0555910 | Msa1019260 | 0.816838 | 4.499283e-52 | -8.615850e-47 |
| Msa0555910 | Msa1037920 | 0.804444 | 2.153711e-49 | -8.615850e-47 |
| Msa0555910 | Msa1040830 | 0.800070 | 1.712399e-48 | -8.615850e-47 |
| Msa0555910 | Msa1041530 | 0.830097 | 3.557012e-55 | -8.615850e-47 |
| Msa0555910 | Msa1054240 | 0.833779 | 4.383525e-56 | -8.615850e-47 |
| Msa0555910 | Msa1063950 | 0.803115 | 4.065895e-49 | -8.615850e-47 |
| Msa0555910 | Msa1066490 | 0.826773 | 2.257347e-54 | -8.615850e-47 |
| Msa0555910 | Msa1081570 | 0.811457 | 6.933356e-51 | -8.615850e-47 |
| Msa0555910 | Msa1082700 | 0.840531 | 8.219075e-58 | -8.615850e-47 |
| Msa0555910 | Msa1094420 | 0.870311 | 1.606553e-66 | -8.615850e-47 |
| Msa0555910 | Msa1097640 | 0.832646 | 8.396185e-56 | -8.615850e-47 |
| Msa0555910 | Msa1104140 | 0.806689 | 7.282015e-50 | -8.615850e-47 |
| Msa0555910 | Msa1104210 | 0.810339 | 1.211018e-50 | -8.615850e-47 |
| Msa0555910 | Msa1115770 | 0.812478 | 4.154101e-51 | -8.615850e-47 |
| Msa0555910 | Msa1126510 | 0.843146 | 1.676454e-58 | -8.615850e-47 |
| Msa0555910 | Msa1126770 | 0.821109 | 4.808115e-53 | -8.615850e-47 |
| Msa0555910 | Msa1127140 | 0.819013 | 1.451117e-52 | -8.615850e-47 |
| Msa0555910 | Msa1127890 | 0.839172 | 1.857846e-57 | -8.615850e-47 |
| Msa0555910 | Msa1134110 | 0.844976 | 5.414204e-59 | -8.615850e-47 |
| Msa0555910 | Msa1139810 | 0.837049 | 6.538400e-57 | -8.615850e-47 |
| Msa0555910 | Msa1165870 | 0.808746 | 2.661174e-50 | -8.615850e-47 |
| Msa0555910 | Msa1166010 | 0.806024 | 1.005624e-49 | -8.615850e-47 |
| Msa0555910 | Msa1166400 | 0.821241 | 4.482544e-53 | -8.615850e-47 |
| Msa0555910 | Msa1166860 | 0.834406 | 3.053221e-56 | -8.615850e-47 |
| Msa0555910 | Msa1173330 | 0.822143 | 2.772865e-53 | -8.615850e-47 |
| Msa0555910 | Msa1174530 | 0.800677 | 1.288153e-48 | -8.615850e-47 |
| Msa0555910 | Msa1183660 | 0.805681 | 1.186971e-49 | -8.615850e-47 |
| Msa0555910 | Msa1184370 | 0.804819 | 1.799234e-49 | -8.615850e-47 |
| Msa0555910 | Msa1200020 | 0.805358 | 1.387293e-49 | -8.615850e-47 |
| Msa0555910 | Msa1201650 | 0.804824 | 1.794332e-49 | -8.615850e-47 |
| Msa0555910 | Msa1208890 | -0.808095 | 3.664536e-50 | -8.615850e-47 |
| Msa0555910 | Msa1224840 | 0.842785 | 2.091600e-58 | -8.615850e-47 |
| Msa0555910 | Msa1226620 | 0.820658 | 6.104515e-53 | -8.615850e-47 |
| Msa0555910 | Msa1227690 | 0.812481 | 4.148246e-51 | -8.615850e-47 |
| Msa0555910 | Msa1228890 | 0.816898 | 4.360875e-52 | -8.615850e-47 |
| Msa0555910 | Msa1232710 | 0.825968 | 3.510302e-54 | -8.615850e-47 |
| Msa0555910 | Msa1234680 | 0.807602 | 4.665770e-50 | -8.615850e-47 |
| Msa0555910 | Msa1236100 | 0.820346 | 7.201292e-53 | -8.615850e-47 |
| Msa0555910 | Msa1249870 | 0.825846 | 3.750758e-54 | -8.615850e-47 |
| Msa0555910 | Msa1252190 | 0.830161 | 3.431100e-55 | -8.615850e-47 |
| Msa0555910 | Msa1269580 | -0.800127 | 1.667555e-48 | -8.615850e-47 |
| Msa0555910 | Msa1274060 | 0.803127 | 4.043999e-49 | -8.615850e-47 |
| Msa0555910 | Msa1274280 | 0.811601 | 6.451342e-51 | -8.615850e-47 |
| Msa0555910 | Msa1283170 | 0.820303 | 7.365467e-53 | -8.615850e-47 |
| Msa0555910 | Msa1292830 | 0.826955 | 2.042195e-54 | -8.615850e-47 |
| Msa0555910 | Msa1307570 | 0.805020 | 1.633105e-49 | -8.615850e-47 |
| Msa0555910 | Msa1307950 | 0.830813 | 2.377433e-55 | -8.615850e-47 |
| Msa0555910 | Msa1313300 | 0.833028 | 6.746385e-56 | -8.615850e-47 |
| Msa0555910 | Msa1316830 | 0.807075 | 6.033146e-50 | -8.615850e-47 |
| Msa0555910 | Msa1340510 | 0.811273 | 7.601814e-51 | -8.615850e-47 |
| Msa0555910 | Msa1351760 | 0.810595 | 1.065966e-50 | -8.615850e-47 |
| Msa0555910 | Msa1363330 | 0.834336 | 3.179296e-56 | -8.615850e-47 |
| Msa0555910 | Msa1364470 | -0.811409 | 7.104352e-51 | -8.615850e-47 |
| Msa0555910 | Msa1365150 | 0.834225 | 3.389430e-56 | -8.615850e-47 |
| Msa0555910 | Msa1365200 | 0.807336 | 5.311813e-50 | -8.615850e-47 |
| Msa0555910 | Msa1367880 | 0.820663 | 6.090728e-53 | -8.615850e-47 |
| Msa0555910 | Msa1370860 | 0.807227 | 5.603818e-50 | -8.615850e-47 |
| Msa0555910 | Msa1373330 | 0.864732 | 9.837059e-65 | -8.615850e-47 |
| Msa0555910 | Msa1379760 | 0.820208 | 7.742472e-53 | -8.615850e-47 |
| Msa0555910 | Msa1379990 | 0.803833 | 2.886343e-49 | -8.615850e-47 |
| Msa0555910 | Msa1385070 | 0.805457 | 1.323006e-49 | -8.615850e-47 |
| Msa0555910 | Msa1386600 | 0.834005 | 3.849139e-56 | -8.615850e-47 |
| Msa0555910 | Msa1390310 | 0.826526 | 2.584571e-54 | -8.615850e-47 |
| Msa0555910 | Msa1391590 | 0.800303 | 1.535283e-48 | -8.615850e-47 |
| Msa0555910 | Msa1397050 | 0.800687 | 1.282297e-48 | -8.615850e-47 |
| Msa0555910 | Msa1397810 | 0.802891 | 4.523831e-49 | -8.615850e-47 |
| Msa0555910 | Msa1404190 | 0.807230 | 5.595217e-50 | -8.615850e-47 |
| Msa0555910 | Msa1406040 | 0.839436 | 1.585961e-57 | -8.615850e-47 |
| Msa0555910 | Msa1420060 | 0.819789 | 9.656742e-53 | -8.615850e-47 |
| Msa0555910 | Msa1438640 | 0.808205 | 3.472833e-50 | -8.615850e-47 |
| Msa0555910 | Msa1438740 | 0.803186 | 3.931344e-49 | -8.615850e-47 |
| Msa0555910 | Msa1440260 | -0.819367 | 1.205458e-52 | -8.615850e-47 |
| Msa0555910 | Msa1442850 | 0.835294 | 1.824098e-56 | -8.615850e-47 |
| Msa0555910 | Msa1447240 | 0.800742 | 1.249511e-48 | -8.615850e-47 |
| Msa0555910 | Msa1448690 | 0.825903 | 3.635665e-54 | -8.615850e-47 |
| Msa0555910 | Msa1450280 | 0.813238 | 2.832482e-51 | -8.615850e-47 |
| Msa0555910 | Msa1459380 | 0.809640 | 1.712346e-50 | -8.615850e-47 |
| Msa0555910 | Msa1461490 | 0.807435 | 5.062855e-50 | -8.615850e-47 |
| Msa0555910 | Msa1466990 | 0.869585 | 2.773627e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0555910 | MtrunA17_Chr4g0042091 | 96.437 | 449 | 3 | 3 | 1 | 448 | 1 | 437 | 0.0 | 868 |
| Msa0555910 | MtrunA17_Chr2g0280501 | 43.155 | 431 | 186 | 10 | 21 | 447 | 1 | 376 | 1.44e-98 | 300 |
| Msa0555910 | MtrunA17_Chr1g0156521 | 38.837 | 430 | 191 | 13 | 22 | 445 | 35 | 398 | 7.87e-73 | 234 |
| Msa0555910 | MtrunA17_Chr3g0114991 | 51.653 | 242 | 103 | 7 | 211 | 445 | 214 | 448 | 2.79e-70 | 229 |
| Msa0555910 | MtrunA17_Chr3g0104431 | 44.583 | 240 | 116 | 8 | 216 | 445 | 154 | 386 | 4.74e-55 | 187 |
| Msa0555910 | MtrunA17_Chr8g0376191 | 56.805 | 169 | 69 | 3 | 279 | 447 | 1 | 165 | 2.65e-53 | 176 |
| Msa0555910 | MtrunA17_Chr2g0280521 | 58.824 | 119 | 49 | 0 | 243 | 361 | 8 | 126 | 6.20e-39 | 137 |
| Msa0555910 | MtrunA17_Chr5g0399041 | 34.375 | 224 | 94 | 7 | 238 | 447 | 105 | 289 | 6.52e-30 | 117 |
| Msa0555910 | MtrunA17_Chr4g0056461 | 35.238 | 210 | 100 | 6 | 241 | 447 | 98 | 274 | 1.82e-27 | 110 |
| Msa0555910 | MtrunA17_Chr5g0445321 | 30.412 | 194 | 121 | 5 | 254 | 445 | 1 | 182 | 1.44e-20 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0555910 | AT5G54630.1 | 69.481 | 462 | 96 | 11 | 21 | 447 | 20 | 471 | 0.0 | 589 |
| Msa0555910 | AT4G27240.1 | 64.450 | 436 | 117 | 6 | 18 | 447 | 27 | 430 | 0.0 | 531 |
| Msa0555910 | AT4G27240.2 | 62.990 | 408 | 113 | 6 | 18 | 419 | 27 | 402 | 2.22e-167 | 478 |
| Msa0555910 | AT1G11490.2 | 39.819 | 442 | 173 | 16 | 21 | 447 | 1 | 364 | 2.40e-78 | 248 |
| Msa0555910 | AT1G11490.1 | 39.819 | 442 | 173 | 16 | 21 | 447 | 1 | 364 | 2.40e-78 | 248 |
| Msa0555910 | AT1G75710.1 | 46.875 | 256 | 109 | 5 | 216 | 447 | 206 | 458 | 1.75e-61 | 207 |
| Msa0555910 | AT2G29660.1 | 41.634 | 257 | 125 | 7 | 208 | 445 | 120 | 370 | 1.79e-48 | 170 |
| Msa0555910 | AT4G22560.1 | 38.605 | 215 | 86 | 9 | 235 | 445 | 89 | 261 | 8.42e-29 | 114 |
| Msa0555910 | AT1G62520.1 | 38.863 | 211 | 96 | 7 | 239 | 447 | 100 | 279 | 4.00e-28 | 113 |
| Msa0555910 | AT4G12450.1 | 33.180 | 217 | 96 | 7 | 239 | 445 | 97 | 274 | 5.23e-23 | 98.6 |
Find 108 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATAACTTCATGAGTTAT+TGG | 0.157846 | 4_1:-53920411 | None:intergenic |
| AAAAGAAGAAGAAGCATTAA+AGG | 0.207612 | 4_1:+53920134 | Msa0555910:CDS |
| AAAATGATGGTACAAATTTA+TGG | 0.233151 | 4_1:+53922278 | Msa0555910:three_prime_UTR |
| TCAAACTGGATTTGATTCTT+TGG | 0.236240 | 4_1:+53921737 | Msa0555910:CDS |
| CTTGGCAGTTACTGAACTTT+TGG | 0.259869 | 4_1:+53921215 | Msa0555910:intron |
| GTTTGGATTCACGGTGAATT+TGG | 0.266400 | 4_1:+53921885 | Msa0555910:three_prime_UTR |
| AAAATTACAAATGTATGAAT+AGG | 0.295551 | 4_1:-53922167 | None:intergenic |
| AAATTACAAATGTATGAATA+GGG | 0.307168 | 4_1:-53922166 | None:intergenic |
| GACACCTAGGATGTTTCTTC+TGG | 0.309460 | 4_1:-53921407 | None:intergenic |
| AAGTCACTTGTGCTTGTTCA+TGG | 0.370609 | 4_1:+53922122 | Msa0555910:three_prime_UTR |
| GTCACAACTAGAAATAAATA+TGG | 0.370687 | 4_1:+53922246 | Msa0555910:three_prime_UTR |
| GAACAAGCAAATGAGACAAA+AGG | 0.375170 | 4_1:-53919913 | None:intergenic |
| GGGTTAAAGTAATGCATTGT+AGG | 0.377644 | 4_1:-53920582 | None:intergenic |
| ACCACAGTAGCTTGTTCTCT+TGG | 0.380190 | 4_1:+53921465 | Msa0555910:CDS |
| TCTCTTGAAACAGATTCTAA+TGG | 0.386384 | 4_1:+53920708 | Msa0555910:CDS |
| AATCTAAAAGATGTTATTCA+TGG | 0.389198 | 4_1:+53920318 | Msa0555910:CDS |
| GGTAAGTTCGACAAAATTAC+AGG | 0.400154 | 4_1:-53921969 | None:intergenic |
| GCTTGTTCTCTTGGTCTCAA+TGG | 0.401559 | 4_1:+53921474 | Msa0555910:CDS |
| AGAAGAGCACAGAATGAGTT+AGG | 0.403969 | 4_1:-53919942 | None:intergenic |
| AAAATATTTACCAGCATGCT+TGG | 0.405089 | 4_1:-53920805 | None:intergenic |
| AAGGAGTTGAAAGGTGGAAT+AGG | 0.409316 | 4_1:+53921567 | Msa0555910:CDS |
| GTTGTGTTTGTAGAATCATT+AGG | 0.411461 | 4_1:+53921526 | Msa0555910:CDS |
| TAATTGCTGGTAGGGTTCAT+AGG | 0.416479 | 4_1:+53921685 | Msa0555910:CDS |
| ATCAACGTGTTGACACGGTT+TGG | 0.417052 | 4_1:+53921868 | Msa0555910:three_prime_UTR |
| AAAGAAGAAGAAGCATTAAA+GGG | 0.417589 | 4_1:+53920135 | Msa0555910:CDS |
| ACTGGATTTGATTCTTTGGC+TGG | 0.418812 | 4_1:+53921741 | Msa0555910:CDS |
| GTTGACACGGTTTGGATTCA+CGG | 0.421092 | 4_1:+53921876 | Msa0555910:three_prime_UTR |
| CAAGAAATGGCATCTCAAAC+TGG | 0.425597 | 4_1:+53921723 | Msa0555910:CDS |
| GTGGTGTTCATTCAAGTAAT+AGG | 0.426313 | 4_1:+53920682 | Msa0555910:CDS |
| AAAAGAAAAGGTGATTTCCT+TGG | 0.433309 | 4_1:-53920630 | None:intergenic |
| GTATAAGAAGAAAACCAAAA+AGG | 0.435847 | 4_1:+53920104 | Msa0555910:CDS |
| ACTTGAAAACATTCAAGAAA+TGG | 0.445655 | 4_1:+53921710 | Msa0555910:CDS |
| GTGGTGAACAGTTTAACAAA+TGG | 0.446542 | 4_1:+53920757 | Msa0555910:CDS |
| TAATGAACCTTCACTTAGAA+AGG | 0.446634 | 4_1:+53921644 | Msa0555910:CDS |
| GGATTCACGGTGAATTTGGC+AGG | 0.452886 | 4_1:+53921889 | Msa0555910:three_prime_UTR |
| CCTCCAGGACCAGGTGTACC+AGG | 0.455632 | 4_1:-53920555 | None:intergenic |
| TCACTGCTTCCTATAGATCT+TGG | 0.456992 | 4_1:-53920378 | None:intergenic |
| GATTCTTTGGCTGGTAAAGT+AGG | 0.457682 | 4_1:+53921750 | Msa0555910:CDS |
| GTTGAAGAAGTCCTAAAAGA+AGG | 0.458747 | 4_1:-53920603 | None:intergenic |
| AGTTGCAGTCCAAGATCTAT+AGG | 0.459011 | 4_1:+53920369 | Msa0555910:CDS |
| TTCCTTCAACCATGCATGAA+AGG | 0.460121 | 4_1:-53919975 | None:intergenic |
| ACCCTTTCATGCATGGTTGA+AGG | 0.463554 | 4_1:+53919973 | Msa0555910:five_prime_UTR |
| ATGCAGAGTAATTGCTGGTA+GGG | 0.484307 | 4_1:+53921677 | Msa0555910:CDS |
| TCCTTCAACCATGCATGAAA+GGG | 0.490073 | 4_1:-53919974 | None:intergenic |
| TACCAGCATGCTTGGAGAGA+TGG | 0.491155 | 4_1:-53920797 | None:intergenic |
| GGTGGTTCTTCAACTTATGT+TGG | 0.492368 | 4_1:+53920522 | Msa0555910:CDS |
| TAGGGTAGTGGTAGTGGTAG+TGG | 0.496081 | 4_1:-53922034 | None:intergenic |
| ATGGAAGACTTGTAAAATGA+TGG | 0.496180 | 4_1:+53922265 | Msa0555910:three_prime_UTR |
| ATAGTATGCAGAGTAATTGC+TGG | 0.496317 | 4_1:+53921672 | Msa0555910:CDS |
| TGAGATAACCCTTTCATGCA+TGG | 0.497101 | 4_1:+53919966 | Msa0555910:five_prime_UTR |
| TGGTGAACAGTTTAACAAAT+GGG | 0.498621 | 4_1:+53920758 | Msa0555910:CDS |
| GAGGAAGATCAGGTTGTTCA+AGG | 0.499461 | 4_1:+53920286 | Msa0555910:CDS |
| GACCCTTCTGACAAAAGAAA+AGG | 0.499545 | 4_1:-53920642 | None:intergenic |
| ATCAATGCCTTTCTAAGTGA+AGG | 0.505745 | 4_1:-53921651 | None:intergenic |
| AACAAGCAAATGAGACAAAA+GGG | 0.510696 | 4_1:-53919912 | None:intergenic |
| AATTACAAATGTATGAATAG+GGG | 0.510948 | 4_1:-53922165 | None:intergenic |
| GATCTTGGACTGCAACTTGG+TGG | 0.516239 | 4_1:-53920363 | None:intergenic |
| TTTGGATCATGTACATCTGA+TGG | 0.518690 | 4_1:-53920213 | None:intergenic |
| TGCATTGTAGGGTGTCCTCC+AGG | 0.520201 | 4_1:-53920570 | None:intergenic |
| CATCCTAGGTGTCTAGCTGA+TGG | 0.521265 | 4_1:+53921417 | Msa0555910:CDS |
| CAAAATCCTTCAAAAGATGT+AGG | 0.522430 | 4_1:-53922086 | None:intergenic |
| CACCATCTCTCCAAGCATGC+TGG | 0.523843 | 4_1:+53920795 | Msa0555910:CDS |
| AAACAAGGAAGAAGAGCTCT+AGG | 0.526190 | 4_1:-53921810 | None:intergenic |
| TTCAAAGAAAACCACACTGT+TGG | 0.527957 | 4_1:-53920165 | None:intergenic |
| AAATTATATGCAGGACAAGC+TGG | 0.530091 | 4_1:+53921265 | Msa0555910:CDS |
| AGGTCTTTATTCAAACATTG+AGG | 0.530157 | 4_1:+53921770 | Msa0555910:CDS |
| AGATTCATCAAGGAAAATAG+TGG | 0.534245 | 4_1:+53921242 | Msa0555910:CDS |
| GTAGGGTGTCCTCCAGGACC+AGG | 0.534778 | 4_1:-53920564 | None:intergenic |
| AGAAAAGGTGATTTCCTTGG+AGG | 0.540659 | 4_1:-53920627 | None:intergenic |
| AGACCTGGTACACCTGGTCC+TGG | 0.541493 | 4_1:+53920552 | Msa0555910:CDS |
| ATAGATCTTGGACTGCAACT+TGG | 0.545029 | 4_1:-53920366 | None:intergenic |
| CACAACATCTACAAGTGGAA+GGG | 0.551250 | 4_1:+53921596 | Msa0555910:CDS |
| AACTAGACTTCCAACTTCCA+AGG | 0.557622 | 4_1:-53920078 | None:intergenic |
| GGTTAAAGTAATGCATTGTA+GGG | 0.557734 | 4_1:-53920581 | None:intergenic |
| GGACTTCTTCAACTCCTCCA+AGG | 0.558541 | 4_1:+53920613 | Msa0555910:CDS |
| TATGCAGAGTAATTGCTGGT+AGG | 0.562940 | 4_1:+53921676 | Msa0555910:CDS |
| ACTTTAAGACCTGGTACACC+TGG | 0.565382 | 4_1:+53920546 | Msa0555910:CDS |
| TCACAACATCTACAAGTGGA+AGG | 0.571126 | 4_1:+53921595 | Msa0555910:CDS |
| AACTCCAGAAGAAACATCCT+AGG | 0.571187 | 4_1:+53921403 | Msa0555910:CDS |
| AAATAGTGGAAATTATATGC+AGG | 0.573880 | 4_1:+53921256 | Msa0555910:CDS |
| TTGAAGAAGTCCTAAAAGAA+GGG | 0.580726 | 4_1:-53920602 | None:intergenic |
| TATGTTGGTACTTTAAGACC+TGG | 0.582691 | 4_1:+53920537 | Msa0555910:CDS |
| ATTACAAATGTATGAATAGG+GGG | 0.584110 | 4_1:-53922164 | None:intergenic |
| TCTGCTAAGAAGGAGTTGAA+AGG | 0.586835 | 4_1:+53921558 | Msa0555910:CDS |
| CAAGAAGGGATTAACAGTGG+TGG | 0.589162 | 4_1:+53920471 | Msa0555910:CDS |
| ATTTGAAGAGTACAGAGAGA+TGG | 0.595060 | 4_1:+53921362 | Msa0555910:CDS |
| GTTTGTAGAATCATTAGGAG+TGG | 0.602627 | 4_1:+53921531 | Msa0555910:CDS |
| ACAGGATCAACGTGTTGACA+CGG | 0.607146 | 4_1:+53921863 | Msa0555910:three_prime_UTR |
| TTGCAAATTACCACAAAACA+AGG | 0.607767 | 4_1:-53921825 | None:intergenic |
| TTTCCATCAGCTAGACACCT+AGG | 0.608502 | 4_1:-53921420 | None:intergenic |
| GCTAAGAAGGAGTTGAAAGG+TGG | 0.609494 | 4_1:+53921561 | Msa0555910:CDS |
| AGCAAATGAGACAAAAGGGA+GGG | 0.610198 | 4_1:-53919908 | None:intergenic |
| TTAGAGTTTCAACAAAATCA+CGG | 0.615481 | 4_1:+53921942 | Msa0555910:three_prime_UTR |
| CTCTCTCTATTCTGCCACAG+TGG | 0.632803 | 4_1:-53921302 | None:intergenic |
| GCTAGTGGTGGTAGTAGTAG+TGG | 0.635609 | 4_1:+53920501 | Msa0555910:CDS |
| TTTCAAGAAGGGATTAACAG+TGG | 0.654520 | 4_1:+53920468 | Msa0555910:CDS |
| AGCAAAGAGAAAGAGAAACA+TGG | 0.658530 | 4_1:+53920040 | Msa0555910:five_prime_UTR |
| AGTGGTGGTAGTAGTAGTGG+TGG | 0.661261 | 4_1:+53920504 | Msa0555910:CDS |
| CCTGGTACACCTGGTCCTGG+AGG | 0.665004 | 4_1:+53920555 | Msa0555910:CDS |
| TAAGTGCATGTATTGAATGA+CGG | 0.667252 | 4_1:-53921990 | None:intergenic |
| ACCAAGAGAACAAGCTACTG+TGG | 0.672385 | 4_1:-53921466 | None:intergenic |
| ACTGTTACTTGTCACAAATG+TGG | 0.687396 | 4_1:+53920738 | Msa0555910:CDS |
| AAGCAAATGAGACAAAAGGG+AGG | 0.691742 | 4_1:-53919909 | None:intergenic |
| AGGGTAATATGCCAACAGTG+TGG | 0.706544 | 4_1:+53920154 | Msa0555910:CDS |
| GTAAGTTCGACAAAATTACA+GGG | 0.709409 | 4_1:-53921968 | None:intergenic |
| GGTGGTAACAATGCTAGTGG+TGG | 0.732313 | 4_1:+53920489 | Msa0555910:CDS |
| AGTGGTGGTAACAATGCTAG+TGG | 0.733810 | 4_1:+53920486 | Msa0555910:CDS |
| TTAAAGTCAGAAAACCACTG+TGG | 0.819817 | 4_1:+53921288 | Msa0555910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTAAAAATTCTTCT+TGG | + | chr4_1:53920826-53920845 | Msa0555910:intron | 10.0% |
| !!! | TATGCTATAGAATTTTTTTA+TGG | + | chr4_1:53920908-53920927 | Msa0555910:intron | 15.0% |
| !! | CAAACAATTCTAAATTAAAA+AGG | - | chr4_1:53921008-53921027 | None:intergenic | 15.0% |
| !! | AAATTACAAATGTATGAATA+GGG | - | chr4_1:53922169-53922188 | None:intergenic | 15.0% |
| !! | AAAATTACAAATGTATGAAT+AGG | - | chr4_1:53922170-53922189 | None:intergenic | 15.0% |
| !! | AATCTAAAAGATGTTATTCA+TGG | + | chr4_1:53920318-53920337 | Msa0555910:CDS | 20.0% |
| !! | AAAATAACTTCATGAGTTAT+TGG | - | chr4_1:53920414-53920433 | None:intergenic | 20.0% |
| !! | AATTCTAAATTAAAAAGGCA+TGG | - | chr4_1:53921003-53921022 | None:intergenic | 20.0% |
| !!! | TATCCTAGATATTTTGAAAA+TGG | - | chr4_1:53921037-53921056 | None:intergenic | 20.0% |
| !! | AATTACAAATGTATGAATAG+GGG | - | chr4_1:53922168-53922187 | None:intergenic | 20.0% |
| !! | AAAATGATGGTACAAATTTA+TGG | + | chr4_1:53922278-53922297 | Msa0555910:three_prime_UTR | 20.0% |
| ! | AGATGTATAGTAAAAAACAC+GGG | - | chr4_1:53919888-53919907 | None:intergenic | 25.0% |
| ! | GAGATGTATAGTAAAAAACA+CGG | - | chr4_1:53919889-53919908 | None:intergenic | 25.0% |
| ! | GTATAAGAAGAAAACCAAAA+AGG | + | chr4_1:53920104-53920123 | Msa0555910:CDS | 25.0% |
| !! | TTCTTTTCTTTCTACCTTTT+TGG | - | chr4_1:53920121-53920140 | None:intergenic | 25.0% |
| !!! | AAAAGAAGAAGAAGCATTAA+AGG | + | chr4_1:53920134-53920153 | Msa0555910:CDS | 25.0% |
| !!! | AAAGAAGAAGAAGCATTAAA+GGG | + | chr4_1:53920135-53920154 | Msa0555910:CDS | 25.0% |
| ! | AGCACAATCTTAACAAAAAA+AGG | + | chr4_1:53920252-53920271 | Msa0555910:CDS | 25.0% |
| ! | ACAATCTTAACAAAAAAAGG+AGG | + | chr4_1:53920255-53920274 | Msa0555910:CDS | 25.0% |
| !!! | AAGTTATTTTGAGTAACTCA+AGG | + | chr4_1:53920424-53920443 | Msa0555910:CDS | 25.0% |
| !! | ATTACTTTAACCCTTCTTTT+AGG | + | chr4_1:53920592-53920611 | Msa0555910:CDS | 25.0% |
| !! | TAAAAATTCTTCTTGGCTTT+AGG | + | chr4_1:53920833-53920852 | Msa0555910:intron | 25.0% |
| ! | TTTGTGGTCAGAAAAATATT+TGG | - | chr4_1:53920863-53920882 | None:intergenic | 25.0% |
| !!! | GCTATAGAATTTTTTTATGG+TGG | + | chr4_1:53920911-53920930 | Msa0555910:intron | 25.0% |
| !!! | AAATCCACACTTTTTGAATT+TGG | + | chr4_1:53920952-53920971 | Msa0555910:intron | 25.0% |
| !!! | AATCCACACTTTTTGAATTT+GGG | + | chr4_1:53920953-53920972 | Msa0555910:intron | 25.0% |
| !! | TCTCCATTTTCAAAATATCT+AGG | + | chr4_1:53921031-53921050 | Msa0555910:intron | 25.0% |
| ! | AATACTAGGATAAAGTAGAT+TGG | - | chr4_1:53921083-53921102 | None:intergenic | 25.0% |
| ! | TGTTCAATGTTCAAAATACT+AGG | - | chr4_1:53921097-53921116 | None:intergenic | 25.0% |
| !!! | AGAAAAATTTGTTTTTCCCT+TGG | + | chr4_1:53921197-53921216 | Msa0555910:intron | 25.0% |
| !! | AAATAGTGGAAATTATATGC+AGG | + | chr4_1:53921256-53921275 | Msa0555910:CDS | 25.0% |
| !!! | CTAAAGTTTTTTGCATATTG+TGG | - | chr4_1:53921338-53921357 | None:intergenic | 25.0% |
| !!! | ATTTCTTGAATGTTTTCAAG+TGG | - | chr4_1:53921711-53921730 | None:intergenic | 25.0% |
| ! | ACTTGAAAACATTCAAGAAA+TGG | + | chr4_1:53921710-53921729 | Msa0555910:CDS | 25.0% |
| ! | TTAGAGTTTCAACAAAATCA+CGG | + | chr4_1:53921942-53921961 | Msa0555910:three_prime_UTR | 25.0% |
| ! | CCATATAAAAGCCAAAAATA+GGG | - | chr4_1:53922055-53922074 | None:intergenic | 25.0% |
| ! | TCCATATAAAAGCCAAAAAT+AGG | - | chr4_1:53922056-53922075 | None:intergenic | 25.0% |
| !!! | TATTTTTGGCTTTTATATGG+AGG | + | chr4_1:53922055-53922074 | Msa0555910:three_prime_UTR | 25.0% |
| ! | ATTACAAATGTATGAATAGG+GGG | - | chr4_1:53922167-53922186 | None:intergenic | 25.0% |
| !! | TTGTGACAATTCAAATTTTC+TGG | - | chr4_1:53922233-53922252 | None:intergenic | 25.0% |
| ! | GTCACAACTAGAAATAAATA+TGG | + | chr4_1:53922246-53922265 | Msa0555910:three_prime_UTR | 25.0% |
| AACAAGCAAATGAGACAAAA+GGG | - | chr4_1:53919915-53919934 | None:intergenic | 30.0% | |
| ATGTACATGATCCAAAAACA+AGG | + | chr4_1:53920220-53920239 | Msa0555910:CDS | 30.0% | |
| !!! | CTTAAATGCTTCCTTGTTTT+TGG | - | chr4_1:53920234-53920253 | None:intergenic | 30.0% |
| ATCTTAACAAAAAAAGGAGG+AGG | + | chr4_1:53920258-53920277 | Msa0555910:CDS | 30.0% | |
| !!! | AAAATCACTGGTTTTCAAGA+AGG | + | chr4_1:53920456-53920475 | Msa0555910:CDS | 30.0% |
| !!! | AAATCACTGGTTTTCAAGAA+GGG | + | chr4_1:53920457-53920476 | Msa0555910:CDS | 30.0% |
| GGTTAAAGTAATGCATTGTA+GGG | - | chr4_1:53920584-53920603 | None:intergenic | 30.0% | |
| TTGAAGAAGTCCTAAAAGAA+GGG | - | chr4_1:53920605-53920624 | None:intergenic | 30.0% | |
| AAAAGAAAAGGTGATTTCCT+TGG | - | chr4_1:53920633-53920652 | None:intergenic | 30.0% | |
| TCTCTTGAAACAGATTCTAA+TGG | + | chr4_1:53920708-53920727 | Msa0555910:CDS | 30.0% | |
| TGGTGAACAGTTTAACAAAT+GGG | + | chr4_1:53920758-53920777 | Msa0555910:CDS | 30.0% | |
| AAAATATTTACCAGCATGCT+TGG | - | chr4_1:53920808-53920827 | None:intergenic | 30.0% | |
| ! | TTTTCTGACCACAAACTTTT+TGG | + | chr4_1:53920868-53920887 | Msa0555910:intron | 30.0% |
| AGCATATCAGATAAAGACTA+TGG | - | chr4_1:53920894-53920913 | None:intergenic | 30.0% | |
| GGATAAAGTAGATTGGAAAA+GGG | - | chr4_1:53921076-53921095 | None:intergenic | 30.0% | |
| AGGATAAAGTAGATTGGAAA+AGG | - | chr4_1:53921077-53921096 | None:intergenic | 30.0% | |
| AGATTCATCAAGGAAAATAG+TGG | + | chr4_1:53921242-53921261 | Msa0555910:CDS | 30.0% | |
| !! | CAGAATAGAGAGAGTTTTAA+AGG | + | chr4_1:53921311-53921330 | Msa0555910:CDS | 30.0% |
| ! | CTGATGGAAATGAACTTTTA+CGG | + | chr4_1:53921433-53921452 | Msa0555910:CDS | 30.0% |
| ! | AATGAACTTTTACGGTTCTA+TGG | + | chr4_1:53921441-53921460 | Msa0555910:CDS | 30.0% |
| GTTGTGTTTGTAGAATCATT+AGG | + | chr4_1:53921526-53921545 | Msa0555910:CDS | 30.0% | |
| TAATGAACCTTCACTTAGAA+AGG | + | chr4_1:53921644-53921663 | Msa0555910:CDS | 30.0% | |
| TCAAACTGGATTTGATTCTT+TGG | + | chr4_1:53921737-53921756 | Msa0555910:CDS | 30.0% | |
| AGGTCTTTATTCAAACATTG+AGG | + | chr4_1:53921770-53921789 | Msa0555910:CDS | 30.0% | |
| TTGCAAATTACCACAAAACA+AGG | - | chr4_1:53921828-53921847 | None:intergenic | 30.0% | |
| GTAAGTTCGACAAAATTACA+GGG | - | chr4_1:53921971-53921990 | None:intergenic | 30.0% | |
| TAAGTGCATGTATTGAATGA+CGG | - | chr4_1:53921993-53922012 | None:intergenic | 30.0% | |
| !!! | CCCTATTTTTGGCTTTTATA+TGG | + | chr4_1:53922052-53922071 | Msa0555910:three_prime_UTR | 30.0% |
| CAAAATCCTTCAAAAGATGT+AGG | - | chr4_1:53922089-53922108 | None:intergenic | 30.0% | |
| ATGGAAGACTTGTAAAATGA+TGG | + | chr4_1:53922265-53922284 | Msa0555910:three_prime_UTR | 30.0% | |
| GAACAAGCAAATGAGACAAA+AGG | - | chr4_1:53919916-53919935 | None:intergenic | 35.0% | |
| AGCAAAGAGAAAGAGAAACA+TGG | + | chr4_1:53920040-53920059 | Msa0555910:five_prime_UTR | 35.0% | |
| !!! | CTTCCAAGGCTTTTTCAAAA+GGG | - | chr4_1:53920067-53920086 | None:intergenic | 35.0% |
| !!! | ACTTCCAAGGCTTTTTCAAA+AGG | - | chr4_1:53920068-53920087 | None:intergenic | 35.0% |
| TTTGAAAAAGCCTTGGAAGT+TGG | + | chr4_1:53920068-53920087 | Msa0555910:five_prime_UTR | 35.0% | |
| TTCAAAGAAAACCACACTGT+TGG | - | chr4_1:53920168-53920187 | None:intergenic | 35.0% | |
| TTTGGATCATGTACATCTGA+TGG | - | chr4_1:53920216-53920235 | None:intergenic | 35.0% | |
| TTAACAAAAAAAGGAGGAGG+AGG | + | chr4_1:53920261-53920280 | Msa0555910:CDS | 35.0% | |
| AGGTGTGAGTTAAAAATCAC+TGG | + | chr4_1:53920444-53920463 | Msa0555910:CDS | 35.0% | |
| TTTCAAGAAGGGATTAACAG+TGG | + | chr4_1:53920468-53920487 | Msa0555910:CDS | 35.0% | |
| !! | TATGTTGGTACTTTAAGACC+TGG | + | chr4_1:53920537-53920556 | Msa0555910:CDS | 35.0% |
| GGGTTAAAGTAATGCATTGT+AGG | - | chr4_1:53920585-53920604 | None:intergenic | 35.0% | |
| GTTGAAGAAGTCCTAAAAGA+AGG | - | chr4_1:53920606-53920625 | None:intergenic | 35.0% | |
| ! | TCACCTTTTCTTTTGTCAGA+AGG | + | chr4_1:53920639-53920658 | Msa0555910:CDS | 35.0% |
| ! | CACCTTTTCTTTTGTCAGAA+GGG | + | chr4_1:53920640-53920659 | Msa0555910:CDS | 35.0% |
| GTGGTGTTCATTCAAGTAAT+AGG | + | chr4_1:53920682-53920701 | Msa0555910:CDS | 35.0% | |
| ! | ACTGTTACTTGTCACAAATG+TGG | + | chr4_1:53920738-53920757 | Msa0555910:CDS | 35.0% |
| GTGGTGAACAGTTTAACAAA+TGG | + | chr4_1:53920757-53920776 | Msa0555910:CDS | 35.0% | |
| AGTCCCAAATTCAAAAAGTG+TGG | - | chr4_1:53920959-53920978 | None:intergenic | 35.0% | |
| AAAAGTTCAGTAACTGCCAA+GGG | - | chr4_1:53921216-53921235 | None:intergenic | 35.0% | |
| !! | TTTTGGAAGGAGATTCATCA+AGG | + | chr4_1:53921232-53921251 | Msa0555910:CDS | 35.0% |
| AAATTATATGCAGGACAAGC+TGG | + | chr4_1:53921265-53921284 | Msa0555910:CDS | 35.0% | |
| TTAAAGTCAGAAAACCACTG+TGG | + | chr4_1:53921288-53921307 | Msa0555910:CDS | 35.0% | |
| ! | ATTTGAAGAGTACAGAGAGA+TGG | + | chr4_1:53921362-53921381 | Msa0555910:CDS | 35.0% |
| GTTTGTAGAATCATTAGGAG+TGG | + | chr4_1:53921531-53921550 | Msa0555910:CDS | 35.0% | |
| ! | GTTTTCACAACATCTACAAG+TGG | + | chr4_1:53921591-53921610 | Msa0555910:CDS | 35.0% |
| ATCAATGCCTTTCTAAGTGA+AGG | - | chr4_1:53921654-53921673 | None:intergenic | 35.0% | |
| ATAGTATGCAGAGTAATTGC+TGG | + | chr4_1:53921672-53921691 | Msa0555910:CDS | 35.0% | |
| CAAATCATGAACCCAAAAAC+AGG | + | chr4_1:53921845-53921864 | Msa0555910:exon | 35.0% | |
| !! | AACACGTTGATCCTGTTTTT+GGG | - | chr4_1:53921859-53921878 | None:intergenic | 35.0% |
| GGTAAGTTCGACAAAATTAC+AGG | - | chr4_1:53921972-53921991 | None:intergenic | 35.0% | |
| AAAAGCCAAAAATAGGGTAG+TGG | - | chr4_1:53922049-53922068 | None:intergenic | 35.0% | |
| !!! | GCTTTTATATGGAGGTACTA+TGG | + | chr4_1:53922063-53922082 | Msa0555910:three_prime_UTR | 35.0% |
| AGCAAATGAGACAAAAGGGA+GGG | - | chr4_1:53919911-53919930 | None:intergenic | 40.0% | |
| AAGCAAATGAGACAAAAGGG+AGG | - | chr4_1:53919912-53919931 | None:intergenic | 40.0% | |
| ! | AGAAGAGCACAGAATGAGTT+AGG | - | chr4_1:53919945-53919964 | None:intergenic | 40.0% |
| TGAGATAACCCTTTCATGCA+TGG | + | chr4_1:53919966-53919985 | Msa0555910:five_prime_UTR | 40.0% | |
| TCCTTCAACCATGCATGAAA+GGG | - | chr4_1:53919977-53919996 | None:intergenic | 40.0% | |
| TTCCTTCAACCATGCATGAA+AGG | - | chr4_1:53919978-53919997 | None:intergenic | 40.0% | |
| AACTAGACTTCCAACTTCCA+AGG | - | chr4_1:53920081-53920100 | None:intergenic | 40.0% | |
| ATAGATCTTGGACTGCAACT+TGG | - | chr4_1:53920369-53920388 | None:intergenic | 40.0% | |
| AGTTGCAGTCCAAGATCTAT+AGG | + | chr4_1:53920369-53920388 | Msa0555910:CDS | 40.0% | |
| TCACTGCTTCCTATAGATCT+TGG | - | chr4_1:53920381-53920400 | None:intergenic | 40.0% | |
| GGTGGTTCTTCAACTTATGT+TGG | + | chr4_1:53920522-53920541 | Msa0555910:CDS | 40.0% | |
| AGAAAAGGTGATTTCCTTGG+AGG | - | chr4_1:53920630-53920649 | None:intergenic | 40.0% | |
| GACCCTTCTGACAAAAGAAA+AGG | - | chr4_1:53920645-53920664 | None:intergenic | 40.0% | |
| ! | CTTTTGTCAGAAGGGTCTAA+TGG | + | chr4_1:53920648-53920667 | Msa0555910:CDS | 40.0% |
| ! | GAAGGGTCTAATGGTTTTCA+TGG | + | chr4_1:53920657-53920676 | Msa0555910:CDS | 40.0% |
| ! | TCTAATGGTTTTCATGGTGG+TGG | + | chr4_1:53920663-53920682 | Msa0555910:CDS | 40.0% |
| GACTATGGCCAAAAAGTTTG+TGG | - | chr4_1:53920879-53920898 | None:intergenic | 40.0% | |
| CAAAAGTTCAGTAACTGCCA+AGG | - | chr4_1:53921217-53921236 | None:intergenic | 40.0% | |
| ! | CTTGGCAGTTACTGAACTTT+TGG | + | chr4_1:53921215-53921234 | Msa0555910:intron | 40.0% |
| ! | GCAGTTACTGAACTTTTGGA+AGG | + | chr4_1:53921219-53921238 | Msa0555910:intron | 40.0% |
| AACTCCAGAAGAAACATCCT+AGG | + | chr4_1:53921403-53921422 | Msa0555910:CDS | 40.0% | |
| ! | GAGTGGTTTTTCTGCTAAGA+AGG | + | chr4_1:53921548-53921567 | Msa0555910:CDS | 40.0% |
| TCTGCTAAGAAGGAGTTGAA+AGG | + | chr4_1:53921558-53921577 | Msa0555910:CDS | 40.0% | |
| AAGGAGTTGAAAGGTGGAAT+AGG | + | chr4_1:53921567-53921586 | Msa0555910:CDS | 40.0% | |
| TCACAACATCTACAAGTGGA+AGG | + | chr4_1:53921595-53921614 | Msa0555910:CDS | 40.0% | |
| CACAACATCTACAAGTGGAA+GGG | + | chr4_1:53921596-53921615 | Msa0555910:CDS | 40.0% | |
| TATGCAGAGTAATTGCTGGT+AGG | + | chr4_1:53921676-53921695 | Msa0555910:CDS | 40.0% | |
| ATGCAGAGTAATTGCTGGTA+GGG | + | chr4_1:53921677-53921696 | Msa0555910:CDS | 40.0% | |
| TAATTGCTGGTAGGGTTCAT+AGG | + | chr4_1:53921685-53921704 | Msa0555910:CDS | 40.0% | |
| CAAGAAATGGCATCTCAAAC+TGG | + | chr4_1:53921723-53921742 | Msa0555910:CDS | 40.0% | |
| ACTGGATTTGATTCTTTGGC+TGG | + | chr4_1:53921741-53921760 | Msa0555910:CDS | 40.0% | |
| GATTCTTTGGCTGGTAAAGT+AGG | + | chr4_1:53921750-53921769 | Msa0555910:CDS | 40.0% | |
| AAACAAGGAAGAAGAGCTCT+AGG | - | chr4_1:53921813-53921832 | None:intergenic | 40.0% | |
| !!! | AGCTCTTCTTCCTTGTTTTG+TGG | + | chr4_1:53921815-53921834 | Msa0555910:CDS | 40.0% |
| ! | CAACACGTTGATCCTGTTTT+TGG | - | chr4_1:53921860-53921879 | None:intergenic | 40.0% |
| GTTTGGATTCACGGTGAATT+TGG | + | chr4_1:53921885-53921904 | Msa0555910:three_prime_UTR | 40.0% | |
| ! | CAAAAATAGGGTAGTGGTAG+TGG | - | chr4_1:53922043-53922062 | None:intergenic | 40.0% |
| ! | CACTACCACTACCCTATTTT+TGG | + | chr4_1:53922041-53922060 | Msa0555910:three_prime_UTR | 40.0% |
| ! | CTATGGCCTACATCTTTTGA+AGG | + | chr4_1:53922080-53922099 | Msa0555910:three_prime_UTR | 40.0% |
| AAGTCACTTGTGCTTGTTCA+TGG | + | chr4_1:53922122-53922141 | Msa0555910:three_prime_UTR | 40.0% | |
| ACCCTTTCATGCATGGTTGA+AGG | + | chr4_1:53919973-53919992 | Msa0555910:five_prime_UTR | 45.0% | |
| !! | GGACCCTTTTGAAAAAGCCT+TGG | + | chr4_1:53920061-53920080 | Msa0555910:five_prime_UTR | 45.0% |
| AGGGTAATATGCCAACAGTG+TGG | + | chr4_1:53920154-53920173 | Msa0555910:CDS | 45.0% | |
| ACAAAAAAAGGAGGAGGAGG+AGG | + | chr4_1:53920264-53920283 | Msa0555910:CDS | 45.0% | |
| ! | GAGGAAGATCAGGTTGTTCA+AGG | + | chr4_1:53920286-53920305 | Msa0555910:CDS | 45.0% |
| CAAGAAGGGATTAACAGTGG+TGG | + | chr4_1:53920471-53920490 | Msa0555910:CDS | 45.0% | |
| AGTGGTGGTAACAATGCTAG+TGG | + | chr4_1:53920486-53920505 | Msa0555910:CDS | 45.0% | |
| !! | ACTTTAAGACCTGGTACACC+TGG | + | chr4_1:53920546-53920565 | Msa0555910:CDS | 45.0% |
| ! | GGGTCTAATGGTTTTCATGG+TGG | + | chr4_1:53920660-53920679 | Msa0555910:CDS | 45.0% |
| GACACCTAGGATGTTTCTTC+TGG | - | chr4_1:53921410-53921429 | None:intergenic | 45.0% | |
| TTTCCATCAGCTAGACACCT+AGG | - | chr4_1:53921423-53921442 | None:intergenic | 45.0% | |
| !! | ACCACAGTAGCTTGTTCTCT+TGG | + | chr4_1:53921465-53921484 | Msa0555910:CDS | 45.0% |
| ACCAAGAGAACAAGCTACTG+TGG | - | chr4_1:53921469-53921488 | None:intergenic | 45.0% | |
| GCTTGTTCTCTTGGTCTCAA+TGG | + | chr4_1:53921474-53921493 | Msa0555910:CDS | 45.0% | |
| GCTAAGAAGGAGTTGAAAGG+TGG | + | chr4_1:53921561-53921580 | Msa0555910:CDS | 45.0% | |
| ! | ACAGGATCAACGTGTTGACA+CGG | + | chr4_1:53921863-53921882 | Msa0555910:three_prime_UTR | 45.0% |
| ! | ATCAACGTGTTGACACGGTT+TGG | + | chr4_1:53921868-53921887 | Msa0555910:three_prime_UTR | 45.0% |
| ! | GTTGACACGGTTTGGATTCA+CGG | + | chr4_1:53921876-53921895 | Msa0555910:three_prime_UTR | 45.0% |
| AAAAAAGGAGGAGGAGGAGG+AGG | + | chr4_1:53920267-53920286 | Msa0555910:CDS | 50.0% | |
| GATCTTGGACTGCAACTTGG+TGG | - | chr4_1:53920366-53920385 | None:intergenic | 50.0% | |
| GGTGGTAACAATGCTAGTGG+TGG | + | chr4_1:53920489-53920508 | Msa0555910:CDS | 50.0% | |
| GCTAGTGGTGGTAGTAGTAG+TGG | + | chr4_1:53920501-53920520 | Msa0555910:CDS | 50.0% | |
| AGTGGTGGTAGTAGTAGTGG+TGG | + | chr4_1:53920504-53920523 | Msa0555910:CDS | 50.0% | |
| GGACTTCTTCAACTCCTCCA+AGG | + | chr4_1:53920613-53920632 | Msa0555910:CDS | 50.0% | |
| TACCAGCATGCTTGGAGAGA+TGG | - | chr4_1:53920800-53920819 | None:intergenic | 50.0% | |
| CTCTCTCTATTCTGCCACAG+TGG | - | chr4_1:53921305-53921324 | None:intergenic | 50.0% | |
| CATCCTAGGTGTCTAGCTGA+TGG | + | chr4_1:53921417-53921436 | Msa0555910:CDS | 50.0% | |
| GGATTCACGGTGAATTTGGC+AGG | + | chr4_1:53921889-53921908 | Msa0555910:three_prime_UTR | 50.0% | |
| !! | TAGGGTAGTGGTAGTGGTAG+TGG | - | chr4_1:53922037-53922056 | None:intergenic | 50.0% |
| ! | TGCATTGTAGGGTGTCCTCC+AGG | - | chr4_1:53920573-53920592 | None:intergenic | 55.0% |
| CACCATCTCTCCAAGCATGC+TGG | + | chr4_1:53920795-53920814 | Msa0555910:CDS | 55.0% | |
| GGAGGAGGAGGAGGAAGATC+AGG | + | chr4_1:53920276-53920295 | Msa0555910:CDS | 60.0% | |
| AGACCTGGTACACCTGGTCC+TGG | + | chr4_1:53920552-53920571 | Msa0555910:CDS | 60.0% | |
| CCTCCAGGACCAGGTGTACC+AGG | - | chr4_1:53920558-53920577 | None:intergenic | 65.0% | |
| CCTGGTACACCTGGTCCTGG+AGG | + | chr4_1:53920555-53920574 | Msa0555910:CDS | 65.0% | |
| ! | GTAGGGTGTCCTCCAGGACC+AGG | - | chr4_1:53920567-53920586 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 53919852 | 53922312 | 53919852 | ID=Msa0555910;Name=Msa0555910 |
| chr4_1 | mRNA | 53919852 | 53922312 | 53919852 | ID=Msa0555910-mRNA-1;Parent=Msa0555910;Name=Msa0555910-mRNA-1;_AED=0.00;_eAED=0.00;_QI=250|1|1|1|1|1|2|458|448 |
| chr4_1 | exon | 53919852 | 53920816 | 53919852 | ID=Msa0555910-mRNA-1:exon:15764;Parent=Msa0555910-mRNA-1 |
| chr4_1 | exon | 53921223 | 53922312 | 53921223 | ID=Msa0555910-mRNA-1:exon:15765;Parent=Msa0555910-mRNA-1 |
| chr4_1 | five_prime_UTR | 53919852 | 53920101 | 53919852 | ID=Msa0555910-mRNA-1:five_prime_utr;Parent=Msa0555910-mRNA-1 |
| chr4_1 | CDS | 53920102 | 53920816 | 53920102 | ID=Msa0555910-mRNA-1:cds;Parent=Msa0555910-mRNA-1 |
| chr4_1 | CDS | 53921223 | 53921854 | 53921223 | ID=Msa0555910-mRNA-1:cds;Parent=Msa0555910-mRNA-1 |
| chr4_1 | three_prime_UTR | 53921855 | 53922312 | 53921855 | ID=Msa0555910-mRNA-1:three_prime_utr;Parent=Msa0555910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
