Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35822.t1 | XP_003596979.1 | 99 | 402 | 4 | 0 | 1 | 402 | 1 | 402 | 1.30E-217 | 765.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35822.t1 | A8MRC7 | 72.7 | 407 | 106 | 2 | 1 | 402 | 1 | 407 | 1.8e-178 | 626.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35822.t1 | G7ITY6 | 99.0 | 402 | 4 | 0 | 1 | 402 | 1 | 402 | 9.6e-218 | 765.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene35822 | 0.815911 | 7.25E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene35822 | 0.844742 | 6.26E-59 | -1.69E-46 |
| MS.gene049230 | MS.gene35822 | 0.807942 | 3.95E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene35822 | 0.849345 | 3.43E-60 | -1.69E-46 |
| MS.gene049404 | MS.gene35822 | 0.818702 | 1.71E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene35822 | 0.851284 | 9.81E-61 | -1.69E-46 |
| MS.gene049584 | MS.gene35822 | 0.803864 | 2.84E-49 | -1.69E-46 |
| MS.gene049647 | MS.gene35822 | 0.826213 | 3.07E-54 | -1.69E-46 |
| MS.gene049669 | MS.gene35822 | 0.828784 | 7.42E-55 | -1.69E-46 |
| MS.gene049801 | MS.gene35822 | 0.803879 | 2.82E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene35822 | 0.807283 | 5.45E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene35822 | 0.810519 | 1.11E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene35822 | 0.835571 | 1.55E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene35822 | 0.819085 | 1.40E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene35822 | 0.822344 | 2.49E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene35822 | 0.87291 | 2.21E-67 | -1.69E-46 |
| MS.gene050605 | MS.gene35822 | 0.81259 | 3.93E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene35822 | -0.804144 | 2.49E-49 | -1.69E-46 |
| MS.gene050629 | MS.gene35822 | -0.814375 | 1.59E-51 | -1.69E-46 |
| MS.gene050680 | MS.gene35822 | 0.841249 | 5.33E-58 | -1.69E-46 |
| MS.gene050724 | MS.gene35822 | 0.802185 | 6.33E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene35822 | 0.828061 | 1.11E-54 | -1.69E-46 |
| MS.gene050759 | MS.gene35822 | 0.810354 | 1.20E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene35822 | 0.844745 | 6.25E-59 | -1.69E-46 |
| MS.gene050763 | MS.gene35822 | 0.844312 | 8.17E-59 | -1.69E-46 |
| MS.gene050787 | MS.gene35822 | 0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene35822 | 0.818698 | 1.71E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene35822 | 0.853404 | 2.44E-61 | -1.69E-46 |
| MS.gene050844 | MS.gene35822 | 0.829692 | 4.47E-55 | -1.69E-46 |
| MS.gene050953 | MS.gene35822 | 0.832425 | 9.52E-56 | -1.69E-46 |
| MS.gene050962 | MS.gene35822 | 0.80138 | 9.25E-49 | -1.69E-46 |
| MS.gene051066 | MS.gene35822 | 0.818043 | 2.41E-52 | -1.69E-46 |
| MS.gene051147 | MS.gene35822 | 0.846293 | 2.38E-59 | -1.69E-46 |
| MS.gene051180 | MS.gene35822 | 0.808024 | 3.80E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene35822 | 0.8392 | 1.83E-57 | -1.69E-46 |
| MS.gene051210 | MS.gene35822 | 0.844345 | 8.01E-59 | -1.69E-46 |
| MS.gene051247 | MS.gene35822 | 0.813105 | 3.03E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene35822 | 0.812446 | 4.22E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene35822 | 0.828246 | 1.00E-54 | -1.69E-46 |
| MS.gene051490 | MS.gene35822 | 0.814186 | 1.75E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene35822 | 0.843931 | 1.03E-58 | -1.69E-46 |
| MS.gene051935 | MS.gene35822 | 0.817752 | 2.80E-52 | -1.69E-46 |
| MS.gene052042 | MS.gene35822 | 0.822973 | 1.78E-53 | -1.69E-46 |
| MS.gene052056 | MS.gene35822 | -0.80853 | 2.96E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene35822 | 0.801341 | 9.42E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene35822 | 0.853769 | 1.92E-61 | -1.69E-46 |
| MS.gene052389 | MS.gene35822 | 0.82534 | 4.94E-54 | -1.69E-46 |
| MS.gene052426 | MS.gene35822 | 0.830313 | 3.15E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene35822 | 0.810769 | 9.78E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene35822 | 0.827649 | 1.39E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene35822 | 0.816552 | 5.21E-52 | -1.69E-46 |
| MS.gene052674 | MS.gene35822 | 0.846495 | 2.10E-59 | -1.69E-46 |
| MS.gene052675 | MS.gene35822 | 0.845687 | 3.48E-59 | -1.69E-46 |
| MS.gene052677 | MS.gene35822 | 0.855324 | 6.81E-62 | -1.69E-46 |
| MS.gene052773 | MS.gene35822 | 0.806072 | 9.82E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene35822 | 0.817568 | 3.08E-52 | -1.69E-46 |
| MS.gene05288 | MS.gene35822 | 0.815011 | 1.15E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene35822 | 0.820276 | 7.47E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene35822 | 0.824148 | 9.44E-54 | -1.69E-46 |
| MS.gene053147 | MS.gene35822 | 0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene35822 | 0.850323 | 1.83E-60 | -1.69E-46 |
| MS.gene053184 | MS.gene35822 | 0.804165 | 2.46E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene35822 | 0.807531 | 4.83E-50 | -1.69E-46 |
| MS.gene053584 | MS.gene35822 | 0.807652 | 4.55E-50 | -1.69E-46 |
| MS.gene053621 | MS.gene35822 | 0.801426 | 9.06E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene35822 | 0.808431 | 3.11E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene35822 | 0.822599 | 2.17E-53 | -1.69E-46 |
| MS.gene054236 | MS.gene35822 | 0.850541 | 1.59E-60 | -1.69E-46 |
| MS.gene054291 | MS.gene35822 | -0.83089 | 2.28E-55 | -1.69E-46 |
| MS.gene054379 | MS.gene35822 | 0.859979 | 2.84E-63 | -1.69E-46 |
| MS.gene054405 | MS.gene35822 | 0.825696 | 4.07E-54 | -1.69E-46 |
| MS.gene054467 | MS.gene35822 | 0.86925 | 3.56E-66 | -1.69E-46 |
| MS.gene054468 | MS.gene35822 | 0.879191 | 1.52E-69 | -1.69E-46 |
| MS.gene054472 | MS.gene35822 | 0.835957 | 1.24E-56 | -1.69E-46 |
| MS.gene054479 | MS.gene35822 | 0.84341 | 1.43E-58 | -1.69E-46 |
| MS.gene054559 | MS.gene35822 | 0.824895 | 6.30E-54 | -1.69E-46 |
| MS.gene054581 | MS.gene35822 | 0.807353 | 5.27E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene35822 | 0.800377 | 1.48E-48 | -1.69E-46 |
| MS.gene05468 | MS.gene35822 | 0.821734 | 3.45E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene35822 | 0.821775 | 3.38E-53 | -1.69E-46 |
| MS.gene054826 | MS.gene35822 | 0.809063 | 2.28E-50 | -1.69E-46 |
| MS.gene054875 | MS.gene35822 | 0.814251 | 1.69E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene35822 | 0.828274 | 9.85E-55 | -1.69E-46 |
| MS.gene05510 | MS.gene35822 | 0.839215 | 1.81E-57 | -1.69E-46 |
| MS.gene055227 | MS.gene35822 | 0.839953 | 1.16E-57 | -1.69E-46 |
| MS.gene055228 | MS.gene35822 | 0.80863 | 2.82E-50 | -1.69E-46 |
| MS.gene055230 | MS.gene35822 | 0.807885 | 4.06E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene35822 | 0.858732 | 6.73E-63 | -1.69E-46 |
| MS.gene055357 | MS.gene35822 | 0.810194 | 1.30E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene35822 | 0.844145 | 9.06E-59 | -1.69E-46 |
| MS.gene055608 | MS.gene35822 | 0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene055623 | MS.gene35822 | 0.818574 | 1.83E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene35822 | 0.882035 | 1.46E-70 | -1.69E-46 |
| MS.gene055818 | MS.gene35822 | 0.835572 | 1.55E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene35822 | 0.873258 | 1.69E-67 | -1.69E-46 |
| MS.gene05595 | MS.gene35822 | 0.809623 | 1.73E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene35822 | 0.857446 | 1.62E-62 | -1.69E-46 |
| MS.gene056162 | MS.gene35822 | 0.803657 | 3.14E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene35822 | 0.838966 | 2.10E-57 | -1.69E-46 |
| MS.gene056174 | MS.gene35822 | 0.827065 | 1.92E-54 | -1.69E-46 |
| MS.gene056480 | MS.gene35822 | 0.838448 | 2.86E-57 | -1.69E-46 |
| MS.gene056506 | MS.gene35822 | 0.833779 | 4.38E-56 | -1.69E-46 |
| MS.gene056873 | MS.gene35822 | 0.826626 | 2.45E-54 | -1.69E-46 |
| MS.gene057012 | MS.gene35822 | 0.809323 | 2.00E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene35822 | 0.829916 | 3.94E-55 | -1.69E-46 |
| MS.gene057156 | MS.gene35822 | -0.833804 | 4.32E-56 | -1.69E-46 |
| MS.gene057194 | MS.gene35822 | 0.837429 | 5.22E-57 | -1.69E-46 |
| MS.gene057394 | MS.gene35822 | 0.800749 | 1.25E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene35822 | 0.803878 | 2.83E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene35822 | 0.842195 | 3.00E-58 | -1.69E-46 |
| MS.gene057665 | MS.gene35822 | 0.809782 | 1.60E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene35822 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene057750 | MS.gene35822 | 0.807566 | 4.75E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene35822 | 0.833639 | 4.75E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene35822 | 0.82366 | 1.23E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene35822 | 0.811538 | 6.66E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene35822 | 0.821845 | 3.25E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene35822 | 0.849241 | 3.67E-60 | -1.69E-46 |
| MS.gene058223 | MS.gene35822 | -0.807025 | 6.18E-50 | -1.69E-46 |
| MS.gene058435 | MS.gene35822 | 0.801142 | 1.04E-48 | -1.69E-46 |
| MS.gene058548 | MS.gene35822 | 0.802564 | 5.28E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene35822 | 0.822867 | 1.88E-53 | -1.69E-46 |
| MS.gene058636 | MS.gene35822 | 0.815875 | 7.39E-52 | -1.69E-46 |
| MS.gene058647 | MS.gene35822 | 0.80529 | 1.43E-49 | -1.69E-46 |
| MS.gene05872 | MS.gene35822 | 0.823616 | 1.26E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene35822 | 0.819043 | 1.43E-52 | -1.69E-46 |
| MS.gene05897 | MS.gene35822 | 0.825149 | 5.49E-54 | -1.69E-46 |
| MS.gene059128 | MS.gene35822 | 0.847252 | 1.30E-59 | -1.69E-46 |
| MS.gene059161 | MS.gene35822 | 0.845447 | 4.04E-59 | -1.69E-46 |
| MS.gene059272 | MS.gene35822 | 0.811351 | 7.31E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene35822 | 0.81898 | 1.48E-52 | -1.69E-46 |
| MS.gene059438 | MS.gene35822 | 0.836364 | 9.77E-57 | -1.69E-46 |
| MS.gene059439 | MS.gene35822 | 0.848435 | 6.14E-60 | -1.69E-46 |
| MS.gene059440 | MS.gene35822 | 0.836156 | 1.10E-56 | -1.69E-46 |
| MS.gene059561 | MS.gene35822 | 0.801068 | 1.07E-48 | -1.69E-46 |
| MS.gene059607 | MS.gene35822 | 0.803757 | 2.99E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene35822 | 0.828692 | 7.81E-55 | -1.69E-46 |
| MS.gene059725 | MS.gene35822 | 0.847689 | 9.87E-60 | -1.69E-46 |
| MS.gene05973 | MS.gene35822 | 0.80166 | 8.11E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene35822 | 0.832992 | 6.89E-56 | -1.69E-46 |
| MS.gene059952 | MS.gene35822 | 0.839068 | 1.98E-57 | -1.69E-46 |
| MS.gene060011 | MS.gene35822 | 0.854709 | 1.03E-61 | -1.69E-46 |
| MS.gene060137 | MS.gene35822 | -0.813874 | 2.05E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene35822 | 0.831806 | 1.35E-55 | -1.69E-46 |
| MS.gene060296 | MS.gene35822 | 0.802584 | 5.23E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene35822 | 0.80847 | 3.05E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene35822 | 0.885294 | 9.20E-72 | -1.69E-46 |
| MS.gene06052 | MS.gene35822 | 0.87346 | 1.45E-67 | -1.69E-46 |
| MS.gene060637 | MS.gene35822 | 0.815491 | 9.00E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene35822 | 0.868767 | 5.11E-66 | -1.69E-46 |
| MS.gene060685 | MS.gene35822 | 0.868975 | 4.38E-66 | -1.69E-46 |
| MS.gene060802 | MS.gene35822 | 0.873512 | 1.39E-67 | -1.69E-46 |
| MS.gene060803 | MS.gene35822 | 0.863853 | 1.85E-64 | -1.69E-46 |
| MS.gene060851 | MS.gene35822 | 0.801257 | 9.81E-49 | -1.69E-46 |
| MS.gene060852 | MS.gene35822 | 0.800329 | 1.52E-48 | -1.69E-46 |
| MS.gene060879 | MS.gene35822 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene060932 | MS.gene35822 | 0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene35822 | 0.873805 | 1.11E-67 | -1.69E-46 |
| MS.gene061114 | MS.gene35822 | -0.800443 | 1.44E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35822.t1 | MTR_2g088270 | 98.756 | 402 | 5 | 0 | 1 | 402 | 1 | 402 | 0.0 | 831 |
| MS.gene35822.t1 | MTR_4g048320 | 79.115 | 407 | 80 | 2 | 1 | 402 | 1 | 407 | 0.0 | 699 |
| MS.gene35822.t1 | MTR_4g048320 | 80.882 | 340 | 60 | 2 | 68 | 402 | 10 | 349 | 0.0 | 595 |
| MS.gene35822.t1 | MTR_3g073370 | 61.282 | 390 | 146 | 3 | 15 | 402 | 9 | 395 | 0.0 | 519 |
| MS.gene35822.t1 | MTR_3g073370 | 61.125 | 391 | 146 | 4 | 15 | 402 | 9 | 396 | 0.0 | 515 |
| MS.gene35822.t1 | MTR_4g013305 | 60.101 | 396 | 129 | 4 | 8 | 402 | 11 | 378 | 2.14e-179 | 504 |
| MS.gene35822.t1 | MTR_4g035490 | 54.663 | 386 | 161 | 4 | 16 | 399 | 7 | 380 | 1.12e-160 | 457 |
| MS.gene35822.t1 | MTR_5g009700 | 47.368 | 266 | 132 | 3 | 88 | 352 | 74 | 332 | 2.03e-82 | 256 |
| MS.gene35822.t1 | MTR_5g009700 | 47.826 | 253 | 124 | 3 | 101 | 352 | 1 | 246 | 1.74e-80 | 248 |
| MS.gene35822.t1 | MTR_3g090600 | 48.846 | 260 | 125 | 4 | 94 | 352 | 80 | 332 | 1.77e-80 | 251 |
| MS.gene35822.t1 | MTR_3g090600 | 48.846 | 260 | 123 | 5 | 94 | 352 | 80 | 330 | 7.02e-79 | 247 |
| MS.gene35822.t1 | MTR_1g012800 | 44.318 | 264 | 136 | 5 | 90 | 352 | 83 | 336 | 1.30e-69 | 223 |
| MS.gene35822.t1 | MTR_3g090600 | 48.085 | 235 | 111 | 5 | 94 | 324 | 80 | 307 | 2.22e-64 | 208 |
| MS.gene35822.t1 | MTR_3g090600 | 48.085 | 235 | 109 | 6 | 94 | 324 | 80 | 305 | 7.02e-63 | 204 |
| MS.gene35822.t1 | MTR_8g463930 | 34.340 | 265 | 158 | 7 | 128 | 389 | 77 | 328 | 4.11e-48 | 167 |
| MS.gene35822.t1 | MTR_2g078030 | 33.333 | 267 | 162 | 6 | 125 | 388 | 68 | 321 | 8.73e-47 | 163 |
| MS.gene35822.t1 | MTR_2g078030 | 35.242 | 227 | 140 | 4 | 125 | 349 | 68 | 289 | 5.49e-43 | 153 |
| MS.gene35822.t1 | MTR_5g041210 | 25.769 | 260 | 169 | 6 | 100 | 346 | 343 | 591 | 3.73e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35822.t1 | AT1G05170 | 76.413 | 407 | 91 | 2 | 1 | 402 | 1 | 407 | 0.0 | 676 |
| MS.gene35822.t1 | AT2G32430 | 73.839 | 409 | 100 | 4 | 1 | 402 | 1 | 409 | 0.0 | 620 |
| MS.gene35822.t1 | AT4G26940 | 72.405 | 395 | 102 | 2 | 12 | 402 | 16 | 407 | 0.0 | 603 |
| MS.gene35822.t1 | AT1G05170 | 75.281 | 356 | 84 | 1 | 1 | 352 | 1 | 356 | 0.0 | 585 |
| MS.gene35822.t1 | AT1G11730 | 61.576 | 406 | 128 | 6 | 1 | 401 | 1 | 383 | 0.0 | 520 |
| MS.gene35822.t1 | AT1G32930 | 60.204 | 392 | 150 | 3 | 13 | 402 | 12 | 399 | 1.87e-179 | 505 |
| MS.gene35822.t1 | AT1G77810 | 60.152 | 394 | 136 | 6 | 10 | 399 | 5 | 381 | 1.57e-175 | 494 |
| MS.gene35822.t1 | AT1G77810 | 59.698 | 397 | 136 | 7 | 10 | 399 | 5 | 384 | 2.03e-173 | 489 |
| MS.gene35822.t1 | AT1G33430 | 57.506 | 393 | 155 | 8 | 16 | 402 | 7 | 393 | 1.05e-156 | 447 |
| MS.gene35822.t1 | AT1G22015 | 54.198 | 393 | 167 | 5 | 15 | 402 | 11 | 395 | 1.89e-153 | 439 |
| MS.gene35822.t1 | AT1G33430 | 56.359 | 401 | 155 | 9 | 16 | 402 | 7 | 401 | 2.34e-153 | 439 |
| MS.gene35822.t1 | AT4G26940 | 67.658 | 269 | 80 | 2 | 12 | 276 | 16 | 281 | 1.89e-125 | 365 |
| MS.gene35822.t1 | AT1G33430 | 56.169 | 308 | 124 | 7 | 16 | 318 | 7 | 308 | 2.04e-109 | 324 |
| MS.gene35822.t1 | AT5G53340 | 46.667 | 270 | 130 | 6 | 94 | 361 | 76 | 333 | 1.30e-81 | 254 |
| MS.gene35822.t1 | AT5G53340 | 47.876 | 259 | 125 | 5 | 94 | 350 | 76 | 326 | 1.47e-81 | 254 |
| MS.gene35822.t1 | AT4G32120 | 44.030 | 268 | 138 | 5 | 90 | 356 | 83 | 339 | 5.00e-70 | 224 |
| MS.gene35822.t1 | AT2G25300 | 43.985 | 266 | 133 | 5 | 90 | 352 | 6 | 258 | 8.37e-70 | 221 |
| MS.gene35822.t1 | AT2G25300 | 43.985 | 266 | 133 | 5 | 90 | 352 | 84 | 336 | 8.46e-69 | 221 |
| MS.gene35822.t1 | AT2G26100 | 37.023 | 262 | 147 | 8 | 131 | 388 | 107 | 354 | 5.40e-50 | 173 |
| MS.gene35822.t1 | AT1G53290 | 33.955 | 268 | 161 | 6 | 125 | 389 | 77 | 331 | 1.50e-47 | 166 |
| MS.gene35822.t1 | AT3G14960 | 33.846 | 260 | 156 | 6 | 131 | 387 | 81 | 327 | 2.81e-47 | 165 |
| MS.gene35822.t1 | AT2G26100 | 37.104 | 221 | 132 | 4 | 131 | 349 | 107 | 322 | 8.84e-45 | 159 |
Find 73 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTAGGAGCTTGGTTTAT+TGG | 0.181423 | 2.1:-13235694 | MS.gene35822:CDS |
| AGACAAGACTATTTCAAATT+TGG | 0.187361 | 2.1:-13237395 | MS.gene35822:CDS |
| ATTATCATCCGCTTTGTAAT+TGG | 0.210456 | 2.1:-13236864 | MS.gene35822:CDS |
| GAACCAGAATACTGGAAATT+TGG | 0.236437 | 2.1:-13235917 | MS.gene35822:CDS |
| TCACCAAATTTCCAGTATTC+TGG | 0.244223 | 2.1:+13235914 | None:intergenic |
| CATGTGTTGCTTCATTTGAT+TGG | 0.320410 | 2.1:-13235164 | MS.gene35822:CDS |
| TTTGTGGAGTGCTTCTTTCT+AGG | 0.339012 | 2.1:-13235067 | None:intergenic |
| ATTTCCAGTATTCTGGTTCA+TGG | 0.346108 | 2.1:+13235921 | None:intergenic |
| GTTGTCCTCGCAAGTCCTTT+AGG | 0.352932 | 2.1:+13237708 | None:intergenic |
| TGCTACTGCTGTTAACTTGT+GGG | 0.357057 | 2.1:-13236404 | MS.gene35822:CDS |
| GACTATTTCAAATTTGGAAA+TGG | 0.359715 | 2.1:-13237389 | MS.gene35822:CDS |
| GCAAATGAGGATGTTTCATT+AGG | 0.363722 | 2.1:-13235709 | MS.gene35822:CDS |
| CTCGCAAGTCCTTTAGGTTC+AGG | 0.363890 | 2.1:+13237714 | None:intergenic |
| AGAAGGTACCTAATGGTTAT+AGG | 0.369031 | 2.1:-13237277 | MS.gene35822:CDS |
| TTGTCTTTGCTGATAATTCA+AGG | 0.373953 | 2.1:+13236437 | None:intergenic |
| ATCTTCATATCTTCTGATAC+AGG | 0.403107 | 2.1:+13237319 | None:intergenic |
| ACATGGAGATTTCCTGAGAT+TGG | 0.407780 | 2.1:-13236580 | MS.gene35822:intron |
| GAGATTCCGTTCGCGCCACT+TGG | 0.410674 | 2.1:-13237222 | MS.gene35822:CDS |
| TGAGAAAAGAAAGAAGTTAG+AGG | 0.413201 | 2.1:-13236898 | MS.gene35822:CDS |
| TGTTAATTCCTATAACCATT+AGG | 0.414080 | 2.1:+13237269 | None:intergenic |
| TACTGGAAATTTGGTGAGAC+AGG | 0.417346 | 2.1:-13235908 | MS.gene35822:CDS |
| TACATCGGATGCATGAAATC+TGG | 0.429775 | 2.1:-13236078 | MS.gene35822:CDS |
| GGACATGCAGTGGAATTTGT+AGG | 0.432142 | 2.1:-13235143 | MS.gene35822:CDS |
| GTTAACAGCAGTAGCAAAGT+AGG | 0.436177 | 2.1:+13236411 | None:intergenic |
| CTGCCTCAATAGCTCGATCT+AGG | 0.448168 | 2.1:+13236613 | None:intergenic |
| AAAGAAGTTAGAGGAAGAGA+AGG | 0.449533 | 2.1:-13236889 | MS.gene35822:CDS |
| GATGATGTTCATGTAAATAT+AGG | 0.452270 | 2.1:-13236355 | MS.gene35822:intron |
| GGTACCATGAACCAGAATAC+TGG | 0.454852 | 2.1:-13235925 | MS.gene35822:CDS |
| AGGATGTTTCATTAGGAGCT+TGG | 0.461834 | 2.1:-13235702 | MS.gene35822:CDS |
| ATCCGCTTTGTAATTGGTCA+TGG | 0.467305 | 2.1:-13236858 | MS.gene35822:CDS |
| AGATAAGTGAATCAACTGTT+AGG | 0.471693 | 2.1:-13237300 | MS.gene35822:CDS |
| AGACTATGCTGTGGTACAAC+AGG | 0.477338 | 2.1:-13235643 | MS.gene35822:intron |
| AAGTGATCATTACCAATCTC+AGG | 0.483099 | 2.1:+13236568 | None:intergenic |
| TTGCTACTGCTGTTAACTTG+TGG | 0.487451 | 2.1:-13236405 | MS.gene35822:CDS |
| TGTATTGGAAGCTTCTGTGC+TGG | 0.490184 | 2.1:-13238928 | MS.gene35822:CDS |
| AAAATTCTTGCAGAGGAGTA+AGG | 0.491081 | 2.1:-13235946 | MS.gene35822:intron |
| TGGCATCCAAGTGGCGCGAA+CGG | 0.528936 | 2.1:+13237216 | None:intergenic |
| TGTTAGGAGAAGGTACCTAA+TGG | 0.531626 | 2.1:-13237284 | MS.gene35822:CDS |
| GAGAAGGTGAGAAAGCTTTG+TGG | 0.536239 | 2.1:-13235083 | MS.gene35822:CDS |
| CGCGCCACTTGGATGCCACA+AGG | 0.537211 | 2.1:-13237211 | MS.gene35822:intron |
| AAGTACTTTCGTCATGCGAC+AGG | 0.539105 | 2.1:-13235881 | MS.gene35822:CDS |
| TTCTCTAGTGCCACGACAGG+TGG | 0.546041 | 2.1:-13236639 | MS.gene35822:intron |
| TCCATCATGCAGATTGTGAA+TGG | 0.546325 | 2.1:-13235206 | MS.gene35822:intron |
| TGGACTATTCCTGAACCTAA+AGG | 0.548621 | 2.1:-13237723 | MS.gene35822:CDS |
| TCCGCTTTGTAATTGGTCAT+GGG | 0.549475 | 2.1:-13236857 | MS.gene35822:intron |
| AAGAAGTTAGAGGAAGAGAA+GGG | 0.551717 | 2.1:-13236888 | MS.gene35822:CDS |
| ATTGTGCAGGATCATGTTGA+AGG | 0.557008 | 2.1:-13236463 | MS.gene35822:intron |
| TTGGTTTATTGGTCTTGATG+TGG | 0.560157 | 2.1:-13235683 | MS.gene35822:CDS |
| CCTTTCTCTAGTGCCACGAC+AGG | 0.562439 | 2.1:-13236642 | MS.gene35822:intron |
| TCTTCACAAGTATGCAAATG+AGG | 0.564981 | 2.1:-13235722 | MS.gene35822:CDS |
| TATCCTAGATCGAGCTATTG+AGG | 0.566969 | 2.1:-13236616 | MS.gene35822:CDS |
| CAATTAAATTTAGTTACAGA+GGG | 0.567403 | 2.1:-13237669 | MS.gene35822:CDS |
| AAGCAAATAAAGCTATGACT+TGG | 0.572489 | 2.1:-13239011 | None:intergenic |
| CGGATGCATGAAATCTGGAC+CGG | 0.576274 | 2.1:-13236073 | MS.gene35822:CDS |
| TCATGCAGATTGTGAATGGA+AGG | 0.579298 | 2.1:-13235202 | MS.gene35822:intron |
| TCATTTGATTGGACATGCAG+TGG | 0.579796 | 2.1:-13235153 | MS.gene35822:CDS |
| TGTGAATGGAAGGCTCAAGC+GGG | 0.589727 | 2.1:-13235192 | MS.gene35822:CDS |
| TCTTCTTTAGTTGCAAGAGA+AGG | 0.590624 | 2.1:-13237558 | MS.gene35822:intron |
| GTGAATCAACTGTTAGGAGA+AGG | 0.596720 | 2.1:-13237294 | MS.gene35822:CDS |
| ACAATTAAATTTAGTTACAG+AGG | 0.607776 | 2.1:-13237670 | MS.gene35822:CDS |
| TTGTGAATGGAAGGCTCAAG+CGG | 0.615812 | 2.1:-13235193 | MS.gene35822:CDS |
| ATGCATCCGATGTATACTCG+TGG | 0.617141 | 2.1:+13236087 | None:intergenic |
| ACTTGCGAGGACAACAGCAA+TGG | 0.618474 | 2.1:-13237700 | MS.gene35822:CDS |
| GCTATGACTTGGAAAAGTAG+AGG | 0.624639 | 2.1:-13239000 | MS.gene35822:CDS |
| GACTTGGAAAAGTAGAGGAG+AGG | 0.626837 | 2.1:-13238995 | MS.gene35822:CDS |
| ATCTAGGATACCACCTGTCG+TGG | 0.640845 | 2.1:+13236629 | None:intergenic |
| GAGGCAGAAGATAGTAAACA+TGG | 0.646324 | 2.1:-13236597 | MS.gene35822:CDS |
| GAAGTGAAGCGCGATACGAA+AGG | 0.667111 | 2.1:-13237536 | MS.gene35822:CDS |
| ACCCATGACCAATTACAAAG+CGG | 0.684488 | 2.1:+13236856 | None:intergenic |
| GATGATCGTAGACTATGCTG+TGG | 0.703632 | 2.1:-13235652 | MS.gene35822:CDS |
| TGAACCTTGTGGCATCCAAG+TGG | 0.703947 | 2.1:+13237207 | None:intergenic |
| GCAAAACCACGAGTATACAT+CGG | 0.705929 | 2.1:-13236093 | MS.gene35822:CDS |
| CTGAACCTAAAGGACTTGCG+AGG | 0.714939 | 2.1:-13237713 | MS.gene35822:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAAATAAAAATTATATC+TGG | - | chr2.1:13238485-13238504 | MS.gene35822:intron | 10.0% |
| !! | TAAAACAAATAAAGATTTAT+AGG | + | chr2.1:13238804-13238823 | None:intergenic | 10.0% |
| !! | TTATTAAACTCAAAAATATA+AGG | + | chr2.1:13236901-13236920 | None:intergenic | 10.0% |
| !!! | ATAATTTTAAATTCTTGAAT+TGG | - | chr2.1:13238836-13238855 | MS.gene35822:intron | 10.0% |
| !!! | ATCACTATTTTATAATAATT+AGG | + | chr2.1:13236065-13236084 | None:intergenic | 10.0% |
| !!! | ATTTTTTATATAAGCTATAT+AGG | - | chr2.1:13237760-13237779 | MS.gene35822:intron | 10.0% |
| !! | AATCAATCATCTATTAATAT+AGG | + | chr2.1:13238460-13238479 | None:intergenic | 15.0% |
| !! | TATAATTGAAGTGAAATTAA+TGG | - | chr2.1:13238294-13238313 | MS.gene35822:intron | 15.0% |
| !! | TGAGATTATATATATGATAA+TGG | + | chr2.1:13235903-13235922 | None:intergenic | 15.0% |
| !! | TTAAATAAAAAGATGGATAA+AGG | + | chr2.1:13238045-13238064 | None:intergenic | 15.0% |
| !! | TTTAAACCAAAAATTGTTAA+TGG | + | chr2.1:13235673-13235692 | None:intergenic | 15.0% |
| !!! | TAGAAAAATCAAGTTTTTAT+TGG | + | chr2.1:13235502-13235521 | None:intergenic | 15.0% |
| !!! | TCTTTTGTTAAATAAAAAGA+TGG | + | chr2.1:13238052-13238071 | None:intergenic | 15.0% |
| !!! | TTTGATGTTTTATTTAACAT+AGG | - | chr2.1:13236111-13236130 | MS.gene35822:CDS | 15.0% |
| !! | AAAAGACCTAAAAAATAAGT+TGG | + | chr2.1:13236091-13236110 | None:intergenic | 20.0% |
| !! | AATAGTATGATATGATAAGA+TGG | + | chr2.1:13236968-13236987 | None:intergenic | 20.0% |
| !! | ACAATTAAATTTAGTTACAG+AGG | - | chr2.1:13236395-13236414 | MS.gene35822:CDS | 20.0% |
| !! | ATAAGATGGTAATATATGAA+TGG | + | chr2.1:13236954-13236973 | None:intergenic | 20.0% |
| !! | CAATCATCAATAAAAAAAAC+AGG | + | chr2.1:13235220-13235239 | None:intergenic | 20.0% |
| !! | CAATTAAATTTAGTTACAGA+GGG | - | chr2.1:13236396-13236415 | MS.gene35822:CDS | 20.0% |
| !! | GAGTACAATAATAGAATTTA+GGG | + | chr2.1:13238765-13238784 | None:intergenic | 20.0% |
| !! | GGAACTAAATTCATAAAAAT+TGG | + | chr2.1:13235412-13235431 | None:intergenic | 20.0% |
| !! | TCAATGAAAAACAAAGTTTA+AGG | + | chr2.1:13235385-13235404 | None:intergenic | 20.0% |
| !! | TGAGTACAATAATAGAATTT+AGG | + | chr2.1:13238766-13238785 | None:intergenic | 20.0% |
| !!! | AAAAATCAAGTTTTTATTGG+TGG | + | chr2.1:13235499-13235518 | None:intergenic | 20.0% |
| !!! | ATAGATGGATCTTTTATTTT+TGG | - | chr2.1:13236033-13236052 | MS.gene35822:intron | 20.0% |
| !!! | ATGTTTTATTTAACATAGGA+TGG | - | chr2.1:13236115-13236134 | MS.gene35822:CDS | 20.0% |
| !!! | TAGATGGATCTTTTATTTTT+GGG | - | chr2.1:13236034-13236053 | MS.gene35822:intron | 20.0% |
| !!! | TGTAATATAAGATTTTCATG+TGG | + | chr2.1:13236141-13236160 | None:intergenic | 20.0% |
| !!! | TTTAAGCCATTAACAATTTT+TGG | - | chr2.1:13235664-13235683 | MS.gene35822:CDS | 20.0% |
| !!! | TTTATAAACTATTGATTCTC+TGG | - | chr2.1:13237125-13237144 | MS.gene35822:intron | 20.0% |
| !!! | TTTTTTACTTCATAAGTAAG+AGG | + | chr2.1:13238274-13238293 | None:intergenic | 20.0% |
| ! | AAGAAATTTATATGTGTGAC+AGG | - | chr2.1:13236316-13236335 | MS.gene35822:intron | 25.0% |
| ! | AATTGAGAGATATTAAGATG+AGG | + | chr2.1:13235767-13235786 | None:intergenic | 25.0% |
| ! | ACGTATGTGTAAAATGTTAT+CGG | + | chr2.1:13236931-13236950 | None:intergenic | 25.0% |
| ! | AGACAAGACTATTTCAAATT+TGG | - | chr2.1:13236670-13236689 | MS.gene35822:intron | 25.0% |
| ! | GACTATTTCAAATTTGGAAA+TGG | - | chr2.1:13236676-13236695 | MS.gene35822:intron | 25.0% |
| ! | GATGATGTTCATGTAAATAT+AGG | - | chr2.1:13237710-13237729 | MS.gene35822:CDS | 25.0% |
| ! | TATATAATCTCACTCATCAA+TGG | - | chr2.1:13235911-13235930 | MS.gene35822:CDS | 25.0% |
| ! | TGTTAATTCCTATAACCATT+AGG | + | chr2.1:13236799-13236818 | None:intergenic | 25.0% |
| ! | TTCTGATGGAACATAAAATA+GGG | + | chr2.1:13235602-13235621 | None:intergenic | 25.0% |
| ! | TTGCTGAAAATAGATTGAAT+TGG | + | chr2.1:13237923-13237942 | None:intergenic | 25.0% |
| ! | TTTCGAAGAGATTATAGAAA+CGG | + | chr2.1:13237845-13237864 | None:intergenic | 25.0% |
| !! | TTGAAATGTTGATAGATAGA+TGG | - | chr2.1:13236018-13236037 | MS.gene35822:intron | 25.0% |
| !! | TTTTGTGAACATTTAATCAC+TGG | - | chr2.1:13235785-13235804 | MS.gene35822:intron | 25.0% |
| !!! | GATAGTCCAACTTATTTTTT+AGG | - | chr2.1:13236082-13236101 | MS.gene35822:CDS | 25.0% |
| !!! | TTTTTAAGCTTAGAAAACCA+TGG | + | chr2.1:13235259-13235278 | None:intergenic | 25.0% |
| AAAAACACCACAATAACTCA+AGG | + | chr2.1:13236291-13236310 | None:intergenic | 30.0% | |
| AAAGAAGTCCACAAAAAATG+TGG | - | chr2.1:13238960-13238979 | MS.gene35822:CDS | 30.0% | |
| AAGAAAATTCATGTACCTGT+TGG | + | chr2.1:13235174-13235193 | None:intergenic | 30.0% | |
| AATTCATTATTAGGTGTCAG+AGG | + | chr2.1:13235946-13235965 | None:intergenic | 30.0% | |
| ACTAAACTCGAGATAGTTAT+AGG | + | chr2.1:13237272-13237291 | None:intergenic | 30.0% | |
| AGATAAGTGAATCAACTGTT+AGG | - | chr2.1:13236765-13236784 | MS.gene35822:intron | 30.0% | |
| AGATGTGCCAATTCATTATT+AGG | + | chr2.1:13235955-13235974 | None:intergenic | 30.0% | |
| ATCCATTTCATTTCTTCTGA+TGG | + | chr2.1:13235616-13235635 | None:intergenic | 30.0% | |
| ATCTTCATATCTTCTGATAC+AGG | + | chr2.1:13236749-13236768 | None:intergenic | 30.0% | |
| ATTATCATCCGCTTTGTAAT+TGG | - | chr2.1:13237201-13237220 | MS.gene35822:intron | 30.0% | |
| CATATTTCCATAAATTCTCG+TGG | + | chr2.1:13237793-13237812 | None:intergenic | 30.0% | |
| CTTCTGATGGAACATAAAAT+AGG | + | chr2.1:13235603-13235622 | None:intergenic | 30.0% | |
| GGAACTAAGCTCATAAAAAT+TGG | + | chr2.1:13235532-13235551 | None:intergenic | 30.0% | |
| GTTATATGTAACTCACTGTA+TGG | + | chr2.1:13236575-13236594 | None:intergenic | 30.0% | |
| TATTGGTGGAACATAAGATA+GGG | + | chr2.1:13235485-13235504 | None:intergenic | 30.0% | |
| TCATAAGTAAGAGGAAAAAG+TGG | + | chr2.1:13238265-13238284 | None:intergenic | 30.0% | |
| TCTGACACCTAATAATGAAT+TGG | - | chr2.1:13235945-13235964 | MS.gene35822:intron | 30.0% | |
| TCTGATGGAACATAAAATAG+GGG | + | chr2.1:13235601-13235620 | None:intergenic | 30.0% | |
| TGACTCAAATGAATTAGCAA+TGG | + | chr2.1:13235345-13235364 | None:intergenic | 30.0% | |
| TGAGAAAAGAAAGAAGTTAG+AGG | - | chr2.1:13237167-13237186 | MS.gene35822:intron | 30.0% | |
| TGCTAATTCATTTGAGTCAT+TGG | - | chr2.1:13235346-13235365 | MS.gene35822:intron | 30.0% | |
| TTATTGGTGGAACATAAGAT+AGG | + | chr2.1:13235486-13235505 | None:intergenic | 30.0% | |
| TTCCATCAGAAGAAATGAAA+TGG | - | chr2.1:13235611-13235630 | MS.gene35822:intron | 30.0% | |
| TTGAAACTATAGAGATGAGA+TGG | + | chr2.1:13237238-13237257 | None:intergenic | 30.0% | |
| TTGTCTTTGCTGATAATTCA+AGG | + | chr2.1:13237631-13237650 | None:intergenic | 30.0% | |
| TTTGTTTCCACGAGAATTTA+TGG | - | chr2.1:13237783-13237802 | MS.gene35822:intron | 30.0% | |
| ! | AATCTATTTTCAGCAACACT+CGG | - | chr2.1:13237927-13237946 | MS.gene35822:intron | 30.0% |
| ! | GAAGCTTTATGTCTCAAAAA+TGG | - | chr2.1:13235102-13235121 | MS.gene35822:CDS | 30.0% |
| ! | TGGATCTGAAATGAATTGAT+TGG | - | chr2.1:13235631-13235650 | MS.gene35822:intron | 30.0% |
| ! | TGGATGATTTTCTTGTGTAT+TGG | - | chr2.1:13235122-13235141 | MS.gene35822:CDS | 30.0% |
| !! | GCTTTATTATGTGTTTTCCA+TGG | - | chr2.1:13235239-13235258 | MS.gene35822:intron | 30.0% |
| !! | GTATGATCCTATTGATTTGA+AGG | - | chr2.1:13237540-13237559 | MS.gene35822:CDS | 30.0% |
| !! | TAGAATTGACTTGACATTGA+GGG | + | chr2.1:13235720-13235739 | None:intergenic | 30.0% |
| !! | TCATAAGAGTATTCTATCAC+TGG | - | chr2.1:13235315-13235334 | MS.gene35822:intron | 30.0% |
| !!! | AATTTGTGTTTTGATTGTGC+AGG | - | chr2.1:13237589-13237608 | MS.gene35822:intron | 30.0% |
| !!! | TTTTGAGACATAAAGCTTCT+AGG | + | chr2.1:13235101-13235120 | None:intergenic | 30.0% |
| AAAATTCTTGCAGAGGAGTA+AGG | - | chr2.1:13238119-13238138 | MS.gene35822:intron | 35.0% | |
| AAAGAAGTTAGAGGAAGAGA+AGG | - | chr2.1:13237176-13237195 | MS.gene35822:intron | 35.0% | |
| AAAGTGTGCACAAGAATAGA+AGG | + | chr2.1:13237108-13237127 | None:intergenic | 35.0% | |
| AAGAAGTTAGAGGAAGAGAA+GGG | - | chr2.1:13237177-13237196 | MS.gene35822:intron | 35.0% | |
| AAGTGATCATTACCAATCTC+AGG | + | chr2.1:13237500-13237519 | None:intergenic | 35.0% | |
| ACATGTCAAAATTCTTGCAG+AGG | - | chr2.1:13238112-13238131 | MS.gene35822:intron | 35.0% | |
| AGATAGGGTGAGAAAGTTTA+AGG | + | chr2.1:13235470-13235489 | None:intergenic | 35.0% | |
| CTGATGGAACATAAAATAGG+GGG | + | chr2.1:13235600-13235619 | None:intergenic | 35.0% | |
| CTTTCCTCCTTCAAATCAAT+AGG | + | chr2.1:13237550-13237569 | None:intergenic | 35.0% | |
| GAACCAGAATACTGGAAATT+TGG | - | chr2.1:13238148-13238167 | MS.gene35822:intron | 35.0% | |
| GAGAGATATTAAGATGAGGT+TGG | + | chr2.1:13235763-13235782 | None:intergenic | 35.0% | |
| GCAAATGAGGATGTTTCATT+AGG | - | chr2.1:13238356-13238375 | MS.gene35822:intron | 35.0% | |
| TCACCAAATTTCCAGTATTC+TGG | + | chr2.1:13238154-13238173 | None:intergenic | 35.0% | |
| TCATTAGGAGCTTGGTTTAT+TGG | - | chr2.1:13238371-13238390 | MS.gene35822:intron | 35.0% | |
| TCTTCACAAGTATGCAAATG+AGG | - | chr2.1:13238343-13238362 | MS.gene35822:intron | 35.0% | |
| TCTTCTTTAGTTGCAAGAGA+AGG | - | chr2.1:13236507-13236526 | MS.gene35822:intron | 35.0% | |
| TGATCGAATTATGAACCTTG+TGG | + | chr2.1:13236872-13236891 | None:intergenic | 35.0% | |
| TTTATATGTGTGACAGGATG+TGG | - | chr2.1:13236322-13236341 | MS.gene35822:intron | 35.0% | |
| ! | ACTTAAAACCCAACTTGCTT+GGG | - | chr2.1:13238654-13238673 | MS.gene35822:intron | 35.0% |
| !! | AGAAGGTACCTAATGGTTAT+AGG | - | chr2.1:13236788-13236807 | MS.gene35822:intron | 35.0% |
| !! | ATTTCCAGTATTCTGGTTCA+TGG | + | chr2.1:13238147-13238166 | None:intergenic | 35.0% |
| !! | CATGTGTTGCTTCATTTGAT+TGG | - | chr2.1:13238901-13238920 | MS.gene35822:intron | 35.0% |
| !! | CTAGAATTGACTTGACATTG+AGG | + | chr2.1:13235721-13235740 | None:intergenic | 35.0% |
| !! | TGATCCTATTGATTTGAAGG+AGG | - | chr2.1:13237543-13237562 | MS.gene35822:CDS | 35.0% |
| !! | TTGGTTTATTGGTCTTGATG+TGG | - | chr2.1:13238382-13238401 | MS.gene35822:intron | 35.0% |
| ACATGGAGATTTCCTGAGAT+TGG | - | chr2.1:13237485-13237504 | MS.gene35822:intron | 40.0% | |
| ACCCATGACCAATTACAAAG+CGG | + | chr2.1:13237212-13237231 | None:intergenic | 40.0% | |
| ACTTAAACCCCAAGCAAGTT+GGG | + | chr2.1:13238665-13238684 | None:intergenic | 40.0% | |
| AGCCCTTAGGAATGTATTGA+CGG | + | chr2.1:13238512-13238531 | None:intergenic | 40.0% | |
| AGGATGTTTCATTAGGAGCT+TGG | - | chr2.1:13238363-13238382 | MS.gene35822:intron | 40.0% | |
| ATCCGCTTTGTAATTGGTCA+TGG | - | chr2.1:13237207-13237226 | MS.gene35822:intron | 40.0% | |
| ATTGTGCAGGATCATGTTGA+AGG | - | chr2.1:13237602-13237621 | MS.gene35822:intron | 40.0% | |
| CATGGTACCTTGAGTTATTG+TGG | - | chr2.1:13236281-13236300 | MS.gene35822:intron | 40.0% | |
| CCTTGAGAATGATCCAAAAG+GGG | + | chr2.1:13238722-13238741 | None:intergenic | 40.0% | |
| GACCGTCAATACATTCCTAA+GGG | - | chr2.1:13238507-13238526 | MS.gene35822:intron | 40.0% | |
| GAGGCAGAAGATAGTAAACA+TGG | - | chr2.1:13237468-13237487 | MS.gene35822:intron | 40.0% | |
| GCAAAACCACGAGTATACAT+CGG | - | chr2.1:13237972-13237991 | MS.gene35822:intron | 40.0% | |
| GCCTTGAGAATGATCCAAAA+GGG | + | chr2.1:13238723-13238742 | None:intergenic | 40.0% | |
| GGACTTTGTGTGTATGTGTT+AGG | - | chr2.1:13238315-13238334 | MS.gene35822:intron | 40.0% | |
| GGGTATTTATAGCGCTTTGT+GGG | + | chr2.1:13238702-13238721 | None:intergenic | 40.0% | |
| GTCCACAAAAAATGTGGAGA+AGG | - | chr2.1:13238966-13238985 | MS.gene35822:CDS | 40.0% | |
| GTGAATCAACTGTTAGGAGA+AGG | - | chr2.1:13236771-13236790 | MS.gene35822:intron | 40.0% | |
| GTTAACAGCAGTAGCAAAGT+AGG | + | chr2.1:13237657-13237676 | None:intergenic | 40.0% | |
| TACATCGGATGCATGAAATC+TGG | - | chr2.1:13237987-13238006 | MS.gene35822:intron | 40.0% | |
| TATCCTAGATCGAGCTATTG+AGG | - | chr2.1:13237449-13237468 | MS.gene35822:intron | 40.0% | |
| TCATGCAGATTGTGAATGGA+AGG | - | chr2.1:13238863-13238882 | MS.gene35822:intron | 40.0% | |
| TCATTTGATTGGACATGCAG+TGG | - | chr2.1:13238912-13238931 | MS.gene35822:CDS | 40.0% | |
| TCCATCATGCAGATTGTGAA+TGG | - | chr2.1:13238859-13238878 | MS.gene35822:intron | 40.0% | |
| TCCATTCACAATCTGCATGA+TGG | + | chr2.1:13238863-13238882 | None:intergenic | 40.0% | |
| TCCGCTTTGTAATTGGTCAT+GGG | - | chr2.1:13237208-13237227 | MS.gene35822:intron | 40.0% | |
| TCTAGATTGCTAGCTAGTTG+AGG | + | chr2.1:13238611-13238630 | None:intergenic | 40.0% | |
| TGCCTTGAGAATGATCCAAA+AGG | + | chr2.1:13238724-13238743 | None:intergenic | 40.0% | |
| TGGACTATTCCTGAACCTAA+AGG | - | chr2.1:13236342-13236361 | MS.gene35822:intron | 40.0% | |
| TTGATTCTCTGGTGACATCT+TGG | - | chr2.1:13237136-13237155 | MS.gene35822:intron | 40.0% | |
| ! | AGCGCTATAAATACCCCTTT+TGG | - | chr2.1:13238706-13238725 | MS.gene35822:intron | 40.0% |
| ! | CACAATAACTCAAGGTACCA+TGG | + | chr2.1:13236283-13236302 | None:intergenic | 40.0% |
| ! | CTGGAATGTTTTTCACCAAC+AGG | - | chr2.1:13235156-13235175 | MS.gene35822:CDS | 40.0% |
| ! | CTTAAAACCCAACTTGCTTG+GGG | - | chr2.1:13238655-13238674 | MS.gene35822:intron | 40.0% |
| ! | GACTTAAAACCCAACTTGCT+TGG | - | chr2.1:13238653-13238672 | MS.gene35822:intron | 40.0% |
| ! | GCTCAAGAGTCTCTAAAAAG+TGG | - | chr2.1:13236719-13236738 | MS.gene35822:intron | 40.0% |
| ! | GCTTTGTTACCAACTTACCA+TGG | - | chr2.1:13236263-13236282 | MS.gene35822:intron | 40.0% |
| ! | TACTGGAAATTTGGTGAGAC+AGG | - | chr2.1:13238157-13238176 | MS.gene35822:intron | 40.0% |
| ! | TTGCTACTGCTGTTAACTTG+TGG | - | chr2.1:13237660-13237679 | MS.gene35822:CDS | 40.0% |
| !! | TCTCACTTTTGAGCAAGAAC+CGG | + | chr2.1:13238014-13238033 | None:intergenic | 40.0% |
| !! | TGCTACTGCTGTTAACTTGT+GGG | - | chr2.1:13237661-13237680 | MS.gene35822:CDS | 40.0% |
| !! | TGTTAGGAGAAGGTACCTAA+TGG | - | chr2.1:13236781-13236800 | MS.gene35822:intron | 40.0% |
| !!! | CACCTTCTCCACATTTTTTG+TGG | + | chr2.1:13238971-13238990 | None:intergenic | 40.0% |
| AAGTACTTTCGTCATGCGAC+AGG | - | chr2.1:13238184-13238203 | MS.gene35822:intron | 45.0% | |
| AGACTATGCTGTGGTACAAC+AGG | - | chr2.1:13238422-13238441 | MS.gene35822:intron | 45.0% | |
| AGATTGCTAGCTAGTTGAGG+AGG | + | chr2.1:13238608-13238627 | None:intergenic | 45.0% | |
| ATGCATCCGATGTATACTCG+TGG | + | chr2.1:13237981-13238000 | None:intergenic | 45.0% | |
| CTGGTGACATCTTGGAAAAC+AGG | - | chr2.1:13237144-13237163 | MS.gene35822:intron | 45.0% | |
| GACTTAAACCCCAAGCAAGT+TGG | + | chr2.1:13238666-13238685 | None:intergenic | 45.0% | |
| GACTTGGAAAAGTAGAGGAG+AGG | - | chr2.1:13235070-13235089 | MS.gene35822:CDS | 45.0% | |
| GAGAAGGTGAGAAAGCTTTG+TGG | - | chr2.1:13238982-13239001 | MS.gene35822:CDS | 45.0% | |
| GATGATCGTAGACTATGCTG+TGG | - | chr2.1:13238413-13238432 | MS.gene35822:intron | 45.0% | |
| GGACATGCAGTGGAATTTGT+AGG | - | chr2.1:13238922-13238941 | MS.gene35822:CDS | 45.0% | |
| GGACCGTCAATACATTCCTA+AGG | - | chr2.1:13238506-13238525 | MS.gene35822:intron | 45.0% | |
| GGTACCATGAACCAGAATAC+TGG | - | chr2.1:13238140-13238159 | MS.gene35822:intron | 45.0% | |
| TGTATTGGAAGCTTCTGTGC+TGG | - | chr2.1:13235137-13235156 | MS.gene35822:CDS | 45.0% | |
| TTGTGAATGGAAGGCTCAAG+CGG | - | chr2.1:13238872-13238891 | MS.gene35822:intron | 45.0% | |
| ! | AATGCCCTCTAGAAAGGCTT+AGG | - | chr2.1:13238534-13238553 | MS.gene35822:intron | 45.0% |
| ! | CCCCTTTTGGATCATTCTCA+AGG | - | chr2.1:13238719-13238738 | MS.gene35822:intron | 45.0% |
| ! | CTCAAGGTACCATGGTAAGT+TGG | + | chr2.1:13236275-13236294 | None:intergenic | 45.0% |
| ! | GGGGTATTTATAGCGCTTTG+TGG | + | chr2.1:13238703-13238722 | None:intergenic | 45.0% |
| !! | AAAAATCATATAATATTTAA+AGG | + | chr2.1:13235433-13235452 | None:intergenic | 5.0% |
| !! | TTAAAAATCATATAATATAA+AGG | + | chr2.1:13235553-13235572 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTAGTATATATT+TGG | - | chr2.1:13235279-13235298 | MS.gene35822:intron | 5.0% |
| ACTTGCGAGGACAACAGCAA+TGG | - | chr2.1:13236365-13236384 | MS.gene35822:CDS | 50.0% | |
| CGGATGCATGAAATCTGGAC+CGG | - | chr2.1:13237992-13238011 | MS.gene35822:intron | 50.0% | |
| CTGAACCTAAAGGACTTGCG+AGG | - | chr2.1:13236352-13236371 | MS.gene35822:intron | 50.0% | |
| CTGCCTCAATAGCTCGATCT+AGG | + | chr2.1:13237455-13237474 | None:intergenic | 50.0% | |
| GAAGTGAAGCGCGATACGAA+AGG | - | chr2.1:13236529-13236548 | MS.gene35822:intron | 50.0% | |
| GTTGTCCTCGCAAGTCCTTT+AGG | + | chr2.1:13236360-13236379 | None:intergenic | 50.0% | |
| TGAACCTTGTGGCATCCAAG+TGG | + | chr2.1:13236861-13236880 | None:intergenic | 50.0% | |
| TGTGAATGGAAGGCTCAAGC+GGG | - | chr2.1:13238873-13238892 | MS.gene35822:intron | 50.0% | |
| ! | ATCTAGGATACCACCTGTCG+TGG | + | chr2.1:13237439-13237458 | None:intergenic | 50.0% |
| ! | CTCGCAAGTCCTTTAGGTTC+AGG | + | chr2.1:13236354-13236373 | None:intergenic | 50.0% |
| CCTGTCGTGGCACTAGAGAA+AGG | + | chr2.1:13237426-13237445 | None:intergenic | 55.0% | |
| CCTTTCTCTAGTGCCACGAC+AGG | - | chr2.1:13237423-13237442 | MS.gene35822:intron | 55.0% | |
| GGCGCCTAAGCCTTTCTAGA+GGG | + | chr2.1:13238541-13238560 | None:intergenic | 55.0% | |
| TTCTCTAGTGCCACGACAGG+TGG | - | chr2.1:13237426-13237445 | MS.gene35822:intron | 55.0% | |
| ! | GGCTCGAATGCCCTCTAGAA+AGG | - | chr2.1:13238528-13238547 | MS.gene35822:intron | 55.0% |
| !! | TAGAGGGCATTCGAGCCCTT+AGG | + | chr2.1:13238525-13238544 | None:intergenic | 55.0% |
| CAGAAGGGCTCCTGAGGCAT+AGG | - | chr2.1:13238564-13238583 | MS.gene35822:intron | 60.0% | |
| CTATGCCTCAGGAGCCCTTC+TGG | + | chr2.1:13238566-13238585 | None:intergenic | 60.0% | |
| GAGATTCCGTTCGCGCCACT+TGG | - | chr2.1:13236843-13236862 | MS.gene35822:intron | 60.0% | |
| GGGCGCCTAAGCCTTTCTAG+AGG | + | chr2.1:13238542-13238561 | None:intergenic | 60.0% | |
| TGGCATCCAAGTGGCGCGAA+CGG | + | chr2.1:13236852-13236871 | None:intergenic | 60.0% | |
| !! | TTGAGGAGGCGCCTCTGGAA+GGG | + | chr2.1:13238594-13238613 | None:intergenic | 60.0% |
| AGGCTTAGGCGCCCTCCAGA+AGG | - | chr2.1:13238548-13238567 | MS.gene35822:intron | 65.0% | |
| CGCGCCACTTGGATGCCACA+AGG | - | chr2.1:13236854-13236873 | MS.gene35822:intron | 65.0% | |
| GCCTCAGGAGCCCTTCTGGA+GGG | + | chr2.1:13238562-13238581 | None:intergenic | 65.0% | |
| GGCTTAGGCGCCCTCCAGAA+GGG | - | chr2.1:13238549-13238568 | MS.gene35822:intron | 65.0% | |
| TGCCTCAGGAGCCCTTCTGG+AGG | + | chr2.1:13238563-13238582 | None:intergenic | 65.0% | |
| !! | GCTAGTTGAGGAGGCGCCTC+TGG | + | chr2.1:13238599-13238618 | None:intergenic | 65.0% |
| !! | GTTGAGGAGGCGCCTCTGGA+AGG | + | chr2.1:13238595-13238614 | None:intergenic | 65.0% |
| GCATAGGCGCGCCCTTCCAG+AGG | - | chr2.1:13238580-13238599 | MS.gene35822:intron | 70.0% | |
| GCCCTCCAGAAGGGCTCCTG+AGG | - | chr2.1:13238558-13238577 | MS.gene35822:intron | 70.0% | |
| ! | GAAGGGCGCGCCTATGCCTC+AGG | + | chr2.1:13238577-13238596 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 13235068 | 13239019 | 13235068 | ID=MS.gene35822 |
| chr2.1 | mRNA | 13235068 | 13239019 | 13235068 | ID=MS.gene35822.t1;Parent=MS.gene35822 |
| chr2.1 | exon | 13238910 | 13239019 | 13238910 | ID=MS.gene35822.t1.exon1;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13238910 | 13239019 | 13238910 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13237653 | 13237749 | 13237653 | ID=MS.gene35822.t1.exon2;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13237653 | 13237749 | 13237653 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13237509 | 13237570 | 13237509 | ID=MS.gene35822.t1.exon3;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13237509 | 13237570 | 13237509 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13237212 | 13237423 | 13237212 | ID=MS.gene35822.t1.exon4;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13237212 | 13237423 | 13237212 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13236858 | 13236921 | 13236858 | ID=MS.gene35822.t1.exon5;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13236858 | 13236921 | 13236858 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13236581 | 13236653 | 13236581 | ID=MS.gene35822.t1.exon6;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13236581 | 13236653 | 13236581 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13236356 | 13236476 | 13236356 | ID=MS.gene35822.t1.exon7;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13236356 | 13236476 | 13236356 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13236060 | 13236147 | 13236060 | ID=MS.gene35822.t1.exon8;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13236060 | 13236147 | 13236060 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13235830 | 13235955 | 13235830 | ID=MS.gene35822.t1.exon9;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13235830 | 13235955 | 13235830 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13235644 | 13235750 | 13235644 | ID=MS.gene35822.t1.exon10;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13235644 | 13235750 | 13235644 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| chr2.1 | exon | 13235068 | 13235216 | 13235068 | ID=MS.gene35822.t1.exon11;Parent=MS.gene35822.t1 |
| chr2.1 | CDS | 13235068 | 13235216 | 13235068 | ID=cds.MS.gene35822.t1;Parent=MS.gene35822.t1 |
| Gene Sequence |
| Protein sequence |
