Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31904.t1 | XP_013466746.1 | 99.1 | 430 | 4 | 0 | 10 | 439 | 262 | 691 | 4.30E-246 | 860.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31904.t1 | Q9ZUL5 | 83.7 | 430 | 70 | 0 | 10 | 439 | 280 | 709 | 1.2e-215 | 750.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31904.t1 | A0A072VG70 | 99.1 | 430 | 4 | 0 | 10 | 439 | 262 | 691 | 3.1e-246 | 860.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene31904.t1 | TR | SNF2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene31904 | 0.811909 | 5.53E-51 | -1.69E-46 |
| MS.gene049159 | MS.gene31904 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene31904 | 0.852222 | 5.32E-61 | -1.69E-46 |
| MS.gene049283 | MS.gene31904 | 0.835169 | 1.96E-56 | -1.69E-46 |
| MS.gene049343 | MS.gene31904 | 0.811765 | 5.94E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene31904 | 0.833401 | 5.45E-56 | -1.69E-46 |
| MS.gene049404 | MS.gene31904 | 0.810444 | 1.15E-50 | -1.69E-46 |
| MS.gene049419 | MS.gene31904 | -0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene049435 | MS.gene31904 | 0.809801 | 1.58E-50 | -1.69E-46 |
| MS.gene049452 | MS.gene31904 | 0.820793 | 5.69E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene31904 | 0.838354 | 3.02E-57 | -1.69E-46 |
| MS.gene049983 | MS.gene31904 | 0.861306 | 1.13E-63 | -1.69E-46 |
| MS.gene050026 | MS.gene31904 | 0.802852 | 4.61E-49 | -1.69E-46 |
| MS.gene050105 | MS.gene31904 | 0.830116 | 3.52E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene31904 | 0.801323 | 9.51E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene31904 | 0.813187 | 2.91E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene31904 | 0.812081 | 5.07E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene31904 | 0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene31904 | 0.807643 | 4.57E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene31904 | 0.828823 | 7.26E-55 | -1.69E-46 |
| MS.gene050759 | MS.gene31904 | 0.807506 | 4.89E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene31904 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene051181 | MS.gene31904 | 0.818249 | 2.16E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene31904 | 0.854372 | 1.29E-61 | -1.69E-46 |
| MS.gene051279 | MS.gene31904 | 0.826172 | 3.14E-54 | -1.69E-46 |
| MS.gene051332 | MS.gene31904 | 0.821133 | 4.75E-53 | -1.69E-46 |
| MS.gene051363 | MS.gene31904 | 0.818469 | 1.93E-52 | -1.69E-46 |
| MS.gene051368 | MS.gene31904 | 0.828856 | 7.12E-55 | -1.69E-46 |
| MS.gene051543 | MS.gene31904 | 0.83471 | 2.56E-56 | -1.69E-46 |
| MS.gene051597 | MS.gene31904 | 0.827939 | 1.19E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene31904 | 0.848106 | 7.57E-60 | -1.69E-46 |
| MS.gene051800 | MS.gene31904 | 0.819473 | 1.14E-52 | -1.69E-46 |
| MS.gene05191 | MS.gene31904 | 0.823647 | 1.24E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene31904 | 0.804193 | 2.43E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene31904 | 0.804894 | 1.74E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene31904 | 0.80236 | 5.82E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene31904 | -0.82168 | 3.55E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene31904 | 0.810091 | 1.37E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene31904 | 0.807564 | 4.75E-50 | -1.69E-46 |
| MS.gene052534 | MS.gene31904 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene31904 | 0.841295 | 5.18E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene31904 | 0.840276 | 9.59E-58 | -1.69E-46 |
| MS.gene052586 | MS.gene31904 | 0.823128 | 1.64E-53 | -1.69E-46 |
| MS.gene052674 | MS.gene31904 | 0.803003 | 4.29E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene31904 | 0.801901 | 7.23E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene31904 | 0.808148 | 3.57E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene31904 | 0.801075 | 1.07E-48 | -1.69E-46 |
| MS.gene052790 | MS.gene31904 | 0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene052954 | MS.gene31904 | 0.816186 | 6.30E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene31904 | 0.822313 | 2.53E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene31904 | 0.825558 | 4.39E-54 | -1.69E-46 |
| MS.gene05308 | MS.gene31904 | 0.870652 | 1.24E-66 | -1.69E-46 |
| MS.gene053166 | MS.gene31904 | 0.80425 | 2.36E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene31904 | 0.835543 | 1.58E-56 | -1.69E-46 |
| MS.gene053272 | MS.gene31904 | -0.806153 | 9.44E-50 | -1.69E-46 |
| MS.gene05350 | MS.gene31904 | 0.813226 | 2.85E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene31904 | 0.803414 | 3.53E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene31904 | 0.826406 | 2.76E-54 | -1.69E-46 |
| MS.gene053963 | MS.gene31904 | 0.820755 | 5.80E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene31904 | 0.815193 | 1.05E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene31904 | 0.845286 | 4.46E-59 | -1.69E-46 |
| MS.gene054236 | MS.gene31904 | 0.808046 | 3.75E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene31904 | 0.819192 | 1.32E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene31904 | -0.804374 | 2.23E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene31904 | 0.865419 | 5.99E-65 | -1.69E-46 |
| MS.gene054576 | MS.gene31904 | 0.836183 | 1.09E-56 | -1.69E-46 |
| MS.gene05458 | MS.gene31904 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene31904 | 0.844861 | 5.82E-59 | -1.69E-46 |
| MS.gene054657 | MS.gene31904 | 0.814466 | 1.52E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene31904 | 0.818977 | 1.48E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene31904 | 0.820687 | 6.01E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene31904 | 0.821199 | 4.58E-53 | -1.69E-46 |
| MS.gene055166 | MS.gene31904 | 0.814989 | 1.16E-51 | -1.69E-46 |
| MS.gene055222 | MS.gene31904 | 0.810877 | 9.26E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene31904 | 0.827491 | 1.52E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene31904 | 0.84451 | 7.23E-59 | -1.69E-46 |
| MS.gene055694 | MS.gene31904 | 0.805277 | 1.44E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene31904 | 0.824517 | 7.73E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene31904 | 0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene055841 | MS.gene31904 | 0.83914 | 1.89E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene31904 | 0.815532 | 8.81E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene31904 | 0.825542 | 4.43E-54 | -1.69E-46 |
| MS.gene056050 | MS.gene31904 | 0.811135 | 8.15E-51 | -1.69E-46 |
| MS.gene056162 | MS.gene31904 | 0.836379 | 9.69E-57 | -1.69E-46 |
| MS.gene056174 | MS.gene31904 | 0.836565 | 8.68E-57 | -1.69E-46 |
| MS.gene056252 | MS.gene31904 | 0.800261 | 1.57E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene31904 | 0.807593 | 4.69E-50 | -1.69E-46 |
| MS.gene056480 | MS.gene31904 | 0.811033 | 8.57E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene31904 | 0.80328 | 3.76E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene31904 | 0.80277 | 4.79E-49 | -1.69E-46 |
| MS.gene056776 | MS.gene31904 | 0.84823 | 7.00E-60 | -1.69E-46 |
| MS.gene056779 | MS.gene31904 | 0.800993 | 1.11E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene31904 | 0.866506 | 2.71E-65 | -1.69E-46 |
| MS.gene05690 | MS.gene31904 | 0.84003 | 1.11E-57 | -1.69E-46 |
| MS.gene056973 | MS.gene31904 | 0.885576 | 7.22E-72 | -1.69E-46 |
| MS.gene057026 | MS.gene31904 | 0.809097 | 2.24E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene31904 | 0.806598 | 7.61E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene31904 | 0.802751 | 4.84E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene31904 | 0.885769 | 6.11E-72 | -1.69E-46 |
| MS.gene057371 | MS.gene31904 | 0.811797 | 5.85E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene31904 | 0.845504 | 3.90E-59 | -1.69E-46 |
| MS.gene057611 | MS.gene31904 | 0.810217 | 1.29E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene31904 | 0.825151 | 5.48E-54 | -1.69E-46 |
| MS.gene057869 | MS.gene31904 | 0.806335 | 8.65E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene31904 | 0.814245 | 1.70E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene31904 | 0.808073 | 3.70E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene31904 | 0.808474 | 3.04E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene31904 | 0.815953 | 7.10E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene31904 | 0.819111 | 1.38E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene31904 | 0.821639 | 3.63E-53 | -1.69E-46 |
| MS.gene058223 | MS.gene31904 | -0.815837 | 7.54E-52 | -1.69E-46 |
| MS.gene058279 | MS.gene31904 | 0.817104 | 3.92E-52 | -1.69E-46 |
| MS.gene058427 | MS.gene31904 | 0.824241 | 8.98E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene31904 | 0.810329 | 1.22E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene31904 | 0.848065 | 7.77E-60 | -1.69E-46 |
| MS.gene058783 | MS.gene31904 | 0.846439 | 2.17E-59 | -1.69E-46 |
| MS.gene058979 | MS.gene31904 | 0.860505 | 1.97E-63 | -1.69E-46 |
| MS.gene05897 | MS.gene31904 | 0.822069 | 2.89E-53 | -1.69E-46 |
| MS.gene059170 | MS.gene31904 | 0.81214 | 4.92E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene31904 | 0.804395 | 2.20E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene31904 | 0.801765 | 7.72E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene31904 | 0.810302 | 1.23E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene31904 | -0.834091 | 3.66E-56 | -1.69E-46 |
| MS.gene060011 | MS.gene31904 | 0.82301 | 1.74E-53 | -1.69E-46 |
| MS.gene060259 | MS.gene31904 | 0.823493 | 1.34E-53 | -1.69E-46 |
| MS.gene060310 | MS.gene31904 | 0.822385 | 2.44E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene31904 | 0.842167 | 3.05E-58 | -1.69E-46 |
| MS.gene060373 | MS.gene31904 | 0.833669 | 4.67E-56 | -1.69E-46 |
| MS.gene060435 | MS.gene31904 | 0.811144 | 8.11E-51 | -1.69E-46 |
| MS.gene060520 | MS.gene31904 | 0.817605 | 3.02E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene31904 | 0.813039 | 3.13E-51 | -1.69E-46 |
| MS.gene060527 | MS.gene31904 | 0.819965 | 8.80E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene31904 | 0.812513 | 4.08E-51 | -1.69E-46 |
| MS.gene060840 | MS.gene31904 | 0.80894 | 2.42E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene31904 | 0.800041 | 1.74E-48 | -1.69E-46 |
| MS.gene060933 | MS.gene31904 | 0.84228 | 2.85E-58 | -1.69E-46 |
| MS.gene060935 | MS.gene31904 | 0.858525 | 7.76E-63 | -1.69E-46 |
| MS.gene060937 | MS.gene31904 | 0.865207 | 6.98E-65 | -1.69E-46 |
| MS.gene061188 | MS.gene31904 | 0.800391 | 1.47E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31904.t1 | MTR_1g035330 | 99.070 | 430 | 4 | 0 | 10 | 439 | 262 | 691 | 0.0 | 892 |
| MS.gene31904.t1 | MTR_5g020000 | 31.602 | 462 | 214 | 13 | 4 | 439 | 243 | 628 | 1.25e-62 | 216 |
| MS.gene31904.t1 | MTR_4g096930 | 34.753 | 446 | 200 | 12 | 11 | 439 | 801 | 1172 | 8.84e-59 | 208 |
| MS.gene31904.t1 | MTR_4g118845 | 34.009 | 444 | 209 | 13 | 2 | 439 | 59 | 424 | 1.25e-58 | 206 |
| MS.gene31904.t1 | MTR_1g105050 | 35.202 | 446 | 192 | 14 | 11 | 439 | 443 | 808 | 1.27e-58 | 207 |
| MS.gene31904.t1 | MTR_4g118845 | 34.009 | 444 | 209 | 13 | 2 | 439 | 246 | 611 | 1.65e-58 | 207 |
| MS.gene31904.t1 | MTR_5g005840 | 34.831 | 445 | 194 | 13 | 11 | 439 | 430 | 794 | 2.06e-58 | 207 |
| MS.gene31904.t1 | MTR_5g090090 | 32.648 | 438 | 222 | 10 | 10 | 439 | 683 | 1055 | 1.67e-53 | 193 |
| MS.gene31904.t1 | MTR_5g090090 | 32.648 | 438 | 222 | 10 | 10 | 439 | 683 | 1055 | 1.96e-53 | 193 |
| MS.gene31904.t1 | MTR_1g013190 | 30.736 | 462 | 207 | 10 | 10 | 439 | 350 | 730 | 6.96e-52 | 188 |
| MS.gene31904.t1 | MTR_2g020000 | 34.537 | 443 | 208 | 14 | 2 | 439 | 249 | 614 | 3.18e-51 | 186 |
| MS.gene31904.t1 | MTR_3g053910 | 32.511 | 446 | 212 | 11 | 10 | 439 | 637 | 1009 | 9.26e-51 | 185 |
| MS.gene31904.t1 | MTR_3g106210 | 32.819 | 454 | 206 | 12 | 10 | 439 | 354 | 732 | 4.24e-50 | 183 |
| MS.gene31904.t1 | MTR_3g106210 | 32.819 | 454 | 206 | 12 | 10 | 439 | 354 | 732 | 4.98e-50 | 183 |
| MS.gene31904.t1 | MTR_3g053910 | 32.280 | 443 | 217 | 11 | 10 | 439 | 666 | 1038 | 5.84e-50 | 182 |
| MS.gene31904.t1 | MTR_3g106210 | 32.819 | 454 | 206 | 12 | 10 | 439 | 354 | 732 | 6.70e-50 | 182 |
| MS.gene31904.t1 | MTR_3g106210 | 32.819 | 454 | 206 | 12 | 10 | 439 | 354 | 732 | 7.50e-50 | 182 |
| MS.gene31904.t1 | MTR_4g118720 | 32.151 | 451 | 206 | 13 | 11 | 438 | 1072 | 1445 | 8.18e-49 | 179 |
| MS.gene31904.t1 | MTR_1g069755 | 31.070 | 383 | 173 | 11 | 76 | 439 | 546 | 856 | 2.41e-46 | 172 |
| MS.gene31904.t1 | MTR_7g045505 | 28.850 | 461 | 222 | 11 | 11 | 436 | 57 | 446 | 1.73e-44 | 166 |
| MS.gene31904.t1 | MTR_7g045505 | 28.850 | 461 | 222 | 11 | 11 | 436 | 57 | 446 | 2.63e-44 | 166 |
| MS.gene31904.t1 | MTR_8g094070 | 30.788 | 419 | 222 | 15 | 49 | 439 | 484 | 862 | 2.51e-42 | 160 |
| MS.gene31904.t1 | MTR_8g094070 | 30.788 | 419 | 222 | 15 | 49 | 439 | 484 | 862 | 2.77e-42 | 160 |
| MS.gene31904.t1 | MTR_8g030550 | 31.360 | 456 | 210 | 13 | 11 | 438 | 1054 | 1434 | 3.02e-42 | 160 |
| MS.gene31904.t1 | MTR_8g030550 | 31.360 | 456 | 210 | 13 | 11 | 438 | 1054 | 1434 | 4.39e-42 | 159 |
| MS.gene31904.t1 | MTR_8g030550 | 31.360 | 456 | 210 | 13 | 11 | 438 | 1054 | 1434 | 7.14e-42 | 159 |
| MS.gene31904.t1 | MTR_4g035100 | 29.581 | 453 | 238 | 15 | 19 | 439 | 1533 | 1936 | 1.18e-39 | 152 |
| MS.gene31904.t1 | MTR_4g035100 | 29.581 | 453 | 238 | 15 | 19 | 439 | 1533 | 1936 | 1.29e-39 | 152 |
| MS.gene31904.t1 | MTR_7g078090 | 30.786 | 458 | 211 | 13 | 11 | 438 | 1061 | 1442 | 5.87e-39 | 150 |
| MS.gene31904.t1 | MTR_1g053955 | 57.377 | 122 | 52 | 0 | 318 | 439 | 1062 | 1183 | 2.10e-38 | 149 |
| MS.gene31904.t1 | MTR_1g053955 | 34.800 | 250 | 126 | 8 | 11 | 250 | 588 | 810 | 1.69e-34 | 137 |
| MS.gene31904.t1 | MTR_5g004720 | 29.369 | 412 | 224 | 12 | 48 | 439 | 297 | 661 | 7.52e-34 | 135 |
| MS.gene31904.t1 | MTR_4g078460 | 27.966 | 472 | 260 | 13 | 11 | 439 | 494 | 928 | 2.13e-33 | 134 |
| MS.gene31904.t1 | MTR_7g090960 | 33.725 | 255 | 139 | 8 | 11 | 252 | 645 | 882 | 3.00e-33 | 133 |
| MS.gene31904.t1 | MTR_7g090960 | 52.033 | 123 | 59 | 0 | 317 | 439 | 1191 | 1313 | 5.94e-31 | 126 |
| MS.gene31904.t1 | MTR_7g090960 | 33.725 | 255 | 139 | 8 | 11 | 252 | 564 | 801 | 3.37e-33 | 133 |
| MS.gene31904.t1 | MTR_7g090960 | 52.033 | 123 | 59 | 0 | 317 | 439 | 1110 | 1232 | 6.01e-31 | 126 |
| MS.gene31904.t1 | MTR_2g084630 | 25.615 | 488 | 276 | 14 | 18 | 438 | 509 | 976 | 1.39e-31 | 128 |
| MS.gene31904.t1 | MTR_2g084630 | 25.749 | 501 | 268 | 19 | 18 | 438 | 503 | 979 | 1.56e-26 | 113 |
| MS.gene31904.t1 | MTR_7g039320 | 44.444 | 135 | 63 | 1 | 314 | 436 | 314 | 448 | 4.28e-26 | 112 |
| MS.gene31904.t1 | MTR_7g039320 | 29.032 | 155 | 96 | 3 | 11 | 159 | 106 | 252 | 4.01e-12 | 68.9 |
| MS.gene31904.t1 | MTR_7g039320 | 44.444 | 135 | 63 | 1 | 314 | 436 | 314 | 448 | 4.33e-26 | 112 |
| MS.gene31904.t1 | MTR_7g039320 | 29.032 | 155 | 96 | 3 | 11 | 159 | 106 | 252 | 4.02e-12 | 68.9 |
| MS.gene31904.t1 | MTR_4g078495 | 49.180 | 122 | 62 | 0 | 318 | 439 | 521 | 642 | 9.22e-24 | 104 |
| MS.gene31904.t1 | MTR_7g089190 | 24.788 | 472 | 284 | 15 | 18 | 438 | 321 | 772 | 1.29e-23 | 104 |
| MS.gene31904.t1 | MTR_1g115215 | 41.732 | 127 | 65 | 1 | 312 | 438 | 872 | 989 | 4.57e-23 | 102 |
| MS.gene31904.t1 | MTR_1g080420 | 26.392 | 485 | 275 | 15 | 11 | 439 | 660 | 1118 | 1.19e-20 | 95.5 |
| MS.gene31904.t1 | MTR_1g080420 | 26.392 | 485 | 275 | 15 | 11 | 439 | 791 | 1249 | 1.29e-20 | 95.5 |
| MS.gene31904.t1 | MTR_2g012830 | 42.727 | 110 | 63 | 0 | 329 | 438 | 1143 | 1252 | 3.95e-20 | 94.0 |
| MS.gene31904.t1 | MTR_1g044120 | 40.650 | 123 | 72 | 1 | 317 | 438 | 985 | 1107 | 8.72e-18 | 86.7 |
| MS.gene31904.t1 | MTR_4g049500 | 37.097 | 124 | 76 | 1 | 317 | 438 | 763 | 886 | 3.51e-17 | 84.7 |
| MS.gene31904.t1 | MTR_4g124090 | 37.705 | 122 | 76 | 0 | 318 | 439 | 470 | 591 | 6.31e-17 | 83.6 |
| MS.gene31904.t1 | MTR_7g450790 | 24.331 | 411 | 243 | 15 | 49 | 439 | 1000 | 1362 | 6.87e-17 | 84.0 |
| MS.gene31904.t1 | MTR_7g050445 | 25.594 | 379 | 206 | 14 | 80 | 439 | 904 | 1225 | 4.45e-16 | 81.3 |
| MS.gene31904.t1 | MTR_2g437480 | 23.118 | 372 | 233 | 10 | 76 | 439 | 648 | 974 | 3.21e-13 | 72.4 |
| MS.gene31904.t1 | MTR_7g450820 | 35.385 | 130 | 74 | 3 | 317 | 439 | 1033 | 1159 | 4.71e-13 | 72.0 |
| MS.gene31904.t1 | MTR_8g037345 | 22.222 | 369 | 237 | 11 | 78 | 439 | 500 | 825 | 8.85e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31904.t1 | AT2G02090 | 83.721 | 430 | 70 | 0 | 10 | 439 | 280 | 709 | 0.0 | 782 |
| MS.gene31904.t1 | AT5G19310 | 34.389 | 442 | 200 | 10 | 11 | 439 | 189 | 553 | 9.69e-60 | 209 |
| MS.gene31904.t1 | AT5G19310 | 34.389 | 442 | 200 | 10 | 11 | 439 | 453 | 817 | 4.79e-59 | 209 |
| MS.gene31904.t1 | AT3G06010 | 33.784 | 444 | 201 | 10 | 11 | 439 | 470 | 835 | 1.83e-56 | 201 |
| MS.gene31904.t1 | AT2G13370 | 34.157 | 445 | 216 | 12 | 4 | 439 | 685 | 1061 | 1.27e-55 | 199 |
| MS.gene31904.t1 | AT2G13370 | 34.157 | 445 | 216 | 12 | 4 | 439 | 685 | 1061 | 1.27e-55 | 199 |
| MS.gene31904.t1 | AT2G13370 | 34.157 | 445 | 216 | 12 | 4 | 439 | 685 | 1061 | 1.27e-55 | 199 |
| MS.gene31904.t1 | AT5G44800 | 33.333 | 441 | 213 | 10 | 11 | 439 | 756 | 1127 | 5.20e-55 | 197 |
| MS.gene31904.t1 | AT2G25170 | 30.973 | 452 | 219 | 11 | 10 | 439 | 363 | 743 | 6.82e-52 | 188 |
| MS.gene31904.t1 | AT2G25170 | 30.531 | 452 | 221 | 10 | 10 | 439 | 337 | 717 | 7.25e-52 | 188 |
| MS.gene31904.t1 | AT2G25170 | 30.531 | 452 | 221 | 10 | 10 | 439 | 337 | 717 | 7.25e-52 | 188 |
| MS.gene31904.t1 | AT2G25170 | 30.973 | 452 | 219 | 11 | 10 | 439 | 354 | 734 | 8.15e-52 | 188 |
| MS.gene31904.t1 | AT4G31900 | 30.876 | 434 | 220 | 10 | 10 | 439 | 289 | 646 | 1.28e-50 | 184 |
| MS.gene31904.t1 | AT4G31900 | 30.876 | 434 | 220 | 10 | 10 | 439 | 248 | 605 | 1.33e-50 | 184 |
| MS.gene31904.t1 | AT4G31900 | 30.876 | 434 | 220 | 10 | 10 | 439 | 289 | 646 | 1.44e-50 | 184 |
| MS.gene31904.t1 | AT2G28290 | 31.180 | 449 | 213 | 12 | 11 | 438 | 821 | 1194 | 6.11e-50 | 183 |
| MS.gene31904.t1 | AT2G28290 | 31.180 | 449 | 213 | 12 | 11 | 438 | 821 | 1194 | 6.11e-50 | 183 |
| MS.gene31904.t1 | AT2G28290 | 31.180 | 449 | 213 | 12 | 11 | 438 | 821 | 1194 | 6.17e-50 | 183 |
| MS.gene31904.t1 | AT2G28290 | 31.180 | 449 | 213 | 12 | 11 | 438 | 822 | 1195 | 6.17e-50 | 183 |
| MS.gene31904.t1 | AT2G28290 | 31.180 | 449 | 213 | 12 | 11 | 438 | 821 | 1194 | 6.17e-50 | 183 |
| MS.gene31904.t1 | AT2G28290 | 31.180 | 449 | 213 | 12 | 11 | 438 | 822 | 1195 | 6.17e-50 | 183 |
| MS.gene31904.t1 | AT2G44980 | 31.390 | 446 | 209 | 12 | 11 | 436 | 119 | 487 | 3.19e-48 | 177 |
| MS.gene31904.t1 | AT2G44980 | 29.892 | 465 | 210 | 12 | 11 | 436 | 118 | 505 | 2.20e-45 | 169 |
| MS.gene31904.t1 | AT2G44980 | 29.892 | 465 | 210 | 12 | 11 | 436 | 119 | 506 | 2.81e-45 | 168 |
| MS.gene31904.t1 | AT2G18760 | 27.883 | 477 | 219 | 11 | 10 | 439 | 450 | 848 | 4.08e-45 | 168 |
| MS.gene31904.t1 | AT2G18760 | 27.883 | 477 | 219 | 11 | 10 | 439 | 450 | 848 | 4.08e-45 | 168 |
| MS.gene31904.t1 | AT2G18760 | 27.883 | 477 | 219 | 11 | 10 | 439 | 450 | 848 | 4.08e-45 | 168 |
| MS.gene31904.t1 | AT2G18760 | 27.883 | 477 | 219 | 11 | 10 | 439 | 450 | 848 | 4.08e-45 | 168 |
| MS.gene31904.t1 | AT2G18760 | 27.883 | 477 | 219 | 11 | 10 | 439 | 450 | 848 | 4.08e-45 | 168 |
| MS.gene31904.t1 | AT2G18760 | 27.883 | 477 | 219 | 11 | 10 | 439 | 450 | 848 | 4.08e-45 | 168 |
| MS.gene31904.t1 | AT2G18760 | 27.883 | 477 | 219 | 11 | 10 | 439 | 509 | 907 | 4.58e-45 | 168 |
| MS.gene31904.t1 | AT2G46020 | 31.126 | 453 | 216 | 10 | 11 | 438 | 1048 | 1429 | 3.90e-42 | 160 |
| MS.gene31904.t1 | AT2G46020 | 31.126 | 453 | 216 | 10 | 11 | 438 | 1048 | 1429 | 3.90e-42 | 160 |
| MS.gene31904.t1 | AT2G46020 | 31.126 | 453 | 216 | 10 | 11 | 438 | 1048 | 1429 | 3.90e-42 | 160 |
| MS.gene31904.t1 | AT3G54280 | 30.501 | 459 | 227 | 18 | 19 | 439 | 1534 | 1938 | 1.55e-41 | 158 |
| MS.gene31904.t1 | AT3G54280 | 30.501 | 459 | 227 | 18 | 19 | 439 | 1565 | 1969 | 1.81e-41 | 158 |
| MS.gene31904.t1 | AT2G46020 | 31.416 | 452 | 215 | 11 | 11 | 438 | 1048 | 1428 | 2.58e-41 | 157 |
| MS.gene31904.t1 | AT2G46020 | 31.416 | 452 | 215 | 11 | 11 | 438 | 1048 | 1428 | 2.58e-41 | 157 |
| MS.gene31904.t1 | AT2G46020 | 31.416 | 452 | 215 | 11 | 11 | 438 | 1048 | 1428 | 2.58e-41 | 157 |
| MS.gene31904.t1 | AT5G63950 | 29.345 | 443 | 243 | 15 | 23 | 439 | 455 | 853 | 5.64e-41 | 156 |
| MS.gene31904.t1 | AT5G63950 | 30.909 | 385 | 206 | 12 | 76 | 439 | 491 | 836 | 1.19e-40 | 155 |
| MS.gene31904.t1 | AT3G12810 | 56.557 | 122 | 53 | 0 | 318 | 439 | 1071 | 1192 | 6.35e-38 | 147 |
| MS.gene31904.t1 | AT3G12810 | 33.725 | 255 | 122 | 8 | 11 | 250 | 599 | 821 | 9.68e-33 | 132 |
| MS.gene31904.t1 | AT3G12810 | 56.557 | 122 | 53 | 0 | 318 | 439 | 1075 | 1196 | 6.85e-38 | 147 |
| MS.gene31904.t1 | AT3G12810 | 33.725 | 255 | 122 | 8 | 11 | 250 | 603 | 825 | 1.06e-32 | 132 |
| MS.gene31904.t1 | AT1G03750 | 28.298 | 470 | 260 | 11 | 11 | 439 | 216 | 649 | 3.29e-37 | 145 |
| MS.gene31904.t1 | AT5G22750 | 26.166 | 493 | 267 | 14 | 18 | 438 | 516 | 983 | 3.92e-35 | 139 |
| MS.gene31904.t1 | AT3G19210 | 28.883 | 412 | 226 | 12 | 48 | 439 | 293 | 657 | 4.09e-33 | 132 |
| MS.gene31904.t1 | AT3G19210 | 28.883 | 412 | 226 | 12 | 48 | 439 | 293 | 657 | 4.30e-33 | 132 |
| MS.gene31904.t1 | AT3G19210 | 28.398 | 412 | 226 | 12 | 48 | 439 | 293 | 655 | 9.39e-32 | 129 |
| MS.gene31904.t1 | AT3G57300 | 51.220 | 123 | 60 | 0 | 317 | 439 | 1205 | 1327 | 1.63e-30 | 125 |
| MS.gene31904.t1 | AT3G57300 | 31.765 | 255 | 144 | 8 | 11 | 252 | 653 | 890 | 3.22e-29 | 121 |
| MS.gene31904.t1 | AT3G57300 | 51.220 | 123 | 60 | 0 | 317 | 439 | 1205 | 1327 | 1.63e-30 | 125 |
| MS.gene31904.t1 | AT3G57300 | 31.765 | 255 | 144 | 8 | 11 | 252 | 653 | 890 | 3.22e-29 | 121 |
| MS.gene31904.t1 | AT3G57300 | 51.220 | 123 | 60 | 0 | 317 | 439 | 1238 | 1360 | 1.97e-30 | 125 |
| MS.gene31904.t1 | AT3G57300 | 33.333 | 216 | 116 | 7 | 48 | 252 | 725 | 923 | 7.44e-27 | 114 |
| MS.gene31904.t1 | AT5G66750 | 55.556 | 108 | 43 | 2 | 335 | 439 | 541 | 646 | 7.08e-30 | 123 |
| MS.gene31904.t1 | AT5G66750 | 30.000 | 270 | 141 | 9 | 4 | 251 | 261 | 504 | 2.26e-27 | 115 |
| MS.gene31904.t1 | AT3G57300 | 31.765 | 255 | 144 | 8 | 11 | 252 | 653 | 890 | 2.38e-29 | 122 |
| MS.gene31904.t1 | AT3G06400 | 30.435 | 253 | 145 | 8 | 2 | 251 | 247 | 471 | 8.48e-26 | 111 |
| MS.gene31904.t1 | AT3G06400 | 54.286 | 105 | 47 | 1 | 336 | 439 | 508 | 612 | 1.44e-25 | 110 |
| MS.gene31904.t1 | AT3G06400 | 30.435 | 253 | 145 | 8 | 2 | 251 | 247 | 471 | 8.65e-26 | 111 |
| MS.gene31904.t1 | AT3G06400 | 54.286 | 105 | 47 | 1 | 336 | 439 | 508 | 612 | 1.53e-25 | 110 |
| MS.gene31904.t1 | AT3G06400 | 30.435 | 253 | 145 | 8 | 2 | 251 | 247 | 471 | 8.72e-26 | 111 |
| MS.gene31904.t1 | AT3G06400 | 54.286 | 105 | 47 | 1 | 336 | 439 | 508 | 612 | 1.48e-25 | 110 |
| MS.gene31904.t1 | AT5G18620 | 54.286 | 105 | 47 | 1 | 336 | 439 | 513 | 617 | 1.42e-25 | 110 |
| MS.gene31904.t1 | AT5G18620 | 30.196 | 255 | 143 | 8 | 2 | 251 | 252 | 476 | 1.62e-25 | 110 |
| MS.gene31904.t1 | AT5G18620 | 54.286 | 105 | 47 | 1 | 336 | 439 | 513 | 617 | 1.44e-25 | 110 |
| MS.gene31904.t1 | AT5G18620 | 30.196 | 255 | 143 | 8 | 2 | 251 | 252 | 476 | 1.79e-25 | 110 |
| MS.gene31904.t1 | AT1G02670 | 26.039 | 457 | 259 | 14 | 18 | 438 | 216 | 629 | 6.43e-24 | 105 |
| MS.gene31904.t1 | AT1G02670 | 26.039 | 457 | 259 | 14 | 18 | 438 | 205 | 618 | 6.86e-24 | 105 |
| MS.gene31904.t1 | AT1G61140 | 43.119 | 109 | 62 | 0 | 330 | 438 | 961 | 1069 | 7.55e-21 | 96.3 |
| MS.gene31904.t1 | AT1G61140 | 43.119 | 109 | 62 | 0 | 330 | 438 | 1119 | 1227 | 1.37e-20 | 95.5 |
| MS.gene31904.t1 | AT1G11100 | 41.509 | 106 | 62 | 0 | 333 | 438 | 927 | 1032 | 3.84e-20 | 94.0 |
| MS.gene31904.t1 | AT3G20010 | 43.689 | 103 | 58 | 0 | 336 | 438 | 628 | 730 | 3.87e-20 | 94.0 |
| MS.gene31904.t1 | AT1G50410 | 43.689 | 103 | 58 | 0 | 336 | 438 | 828 | 930 | 4.00e-20 | 94.0 |
| MS.gene31904.t1 | AT1G50410 | 43.689 | 103 | 58 | 0 | 336 | 438 | 828 | 930 | 4.00e-20 | 94.0 |
| MS.gene31904.t1 | AT1G50410 | 43.689 | 103 | 58 | 0 | 336 | 438 | 828 | 930 | 4.00e-20 | 94.0 |
| MS.gene31904.t1 | AT3G20010 | 43.689 | 103 | 58 | 0 | 336 | 438 | 603 | 705 | 4.37e-20 | 93.6 |
| MS.gene31904.t1 | AT1G11100 | 41.509 | 106 | 62 | 0 | 333 | 438 | 971 | 1076 | 4.43e-20 | 94.0 |
| MS.gene31904.t1 | AT1G11100 | 41.509 | 106 | 62 | 0 | 333 | 438 | 1070 | 1175 | 5.41e-20 | 93.6 |
| MS.gene31904.t1 | AT1G11100 | 41.509 | 106 | 62 | 0 | 333 | 438 | 1113 | 1218 | 5.47e-20 | 93.6 |
| MS.gene31904.t1 | AT1G11100 | 41.509 | 106 | 62 | 0 | 333 | 438 | 1114 | 1219 | 5.57e-20 | 93.6 |
| MS.gene31904.t1 | AT3G20010 | 43.689 | 103 | 58 | 0 | 336 | 438 | 894 | 996 | 9.50e-20 | 92.8 |
| MS.gene31904.t1 | AT3G20010 | 43.689 | 103 | 58 | 0 | 336 | 438 | 894 | 996 | 9.50e-20 | 92.8 |
| MS.gene31904.t1 | AT3G20010 | 43.689 | 103 | 58 | 0 | 336 | 438 | 894 | 996 | 9.50e-20 | 92.8 |
| MS.gene31904.t1 | AT1G08600 | 26.699 | 412 | 217 | 13 | 80 | 439 | 851 | 1229 | 2.22e-19 | 91.7 |
| MS.gene31904.t1 | AT1G08600 | 26.699 | 412 | 217 | 13 | 80 | 439 | 872 | 1250 | 2.81e-19 | 91.7 |
| MS.gene31904.t1 | AT1G08600 | 26.699 | 412 | 217 | 13 | 80 | 439 | 872 | 1250 | 2.81e-19 | 91.7 |
| MS.gene31904.t1 | AT1G08600 | 26.699 | 412 | 217 | 13 | 80 | 439 | 872 | 1250 | 2.81e-19 | 91.7 |
| MS.gene31904.t1 | AT1G05120 | 39.516 | 124 | 73 | 1 | 317 | 438 | 704 | 827 | 4.83e-19 | 90.5 |
| MS.gene31904.t1 | AT1G05120 | 39.516 | 124 | 73 | 1 | 317 | 438 | 661 | 784 | 5.43e-19 | 90.1 |
| MS.gene31904.t1 | AT5G43530 | 41.129 | 124 | 71 | 1 | 317 | 438 | 1108 | 1231 | 9.63e-19 | 89.7 |
| MS.gene31904.t1 | AT1G02670 | 41.346 | 104 | 61 | 0 | 336 | 439 | 512 | 615 | 2.54e-18 | 87.8 |
| MS.gene31904.t1 | AT1G02670 | 41.346 | 104 | 61 | 0 | 336 | 439 | 539 | 642 | 2.86e-18 | 87.8 |
| MS.gene31904.t1 | AT1G02670 | 41.748 | 103 | 60 | 0 | 336 | 438 | 512 | 614 | 8.62e-18 | 86.3 |
| MS.gene31904.t1 | AT1G02670 | 41.748 | 103 | 60 | 0 | 336 | 438 | 539 | 641 | 9.21e-18 | 86.3 |
| MS.gene31904.t1 | AT1G48310 | 37.705 | 122 | 76 | 0 | 318 | 439 | 468 | 589 | 4.08e-17 | 84.3 |
| MS.gene31904.t1 | AT1G48310 | 37.705 | 122 | 76 | 0 | 318 | 439 | 468 | 589 | 4.66e-17 | 84.0 |
| MS.gene31904.t1 | AT1G48310 | 37.705 | 122 | 76 | 0 | 318 | 439 | 473 | 594 | 5.08e-17 | 84.0 |
| MS.gene31904.t1 | AT5G05130 | 40.777 | 103 | 59 | 1 | 336 | 436 | 727 | 829 | 3.69e-15 | 78.6 |
| MS.gene31904.t1 | AT5G07810 | 20.102 | 393 | 251 | 10 | 69 | 439 | 308 | 659 | 5.27e-14 | 75.1 |
| MS.gene31904.t1 | AT2G16390 | 24.810 | 395 | 203 | 17 | 78 | 439 | 487 | 820 | 3.05e-13 | 72.4 |
| MS.gene31904.t1 | AT2G16390 | 24.810 | 395 | 203 | 17 | 78 | 439 | 490 | 823 | 3.37e-13 | 72.4 |
Find 89 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCGTATGAAGTCTATATT+AGG | 0.202585 | 1.1:-19596108 | MS.gene31904:CDS |
| GACATCAATGCTTGATATAT+TGG | 0.245544 | 1.1:-19593079 | MS.gene31904:CDS |
| CTACATCCAATAGGTGCTTT+TGG | 0.267000 | 1.1:-19595111 | MS.gene31904:CDS |
| GCTGCATCACATCAGATTTC+AGG | 0.290922 | 1.1:+19596067 | None:intergenic |
| TGATATATTGGAGTGGGCTT+TGG | 0.308912 | 1.1:-19593067 | MS.gene31904:CDS |
| TTCAGGCGCCGTAAAATAAA+TGG | 0.317710 | 1.1:+19596084 | None:intergenic |
| AAATACCTGTATACGGTTAC+AGG | 0.336163 | 1.1:+19590793 | None:intergenic |
| GAGTGGGCTTTGGATGTCAT+TGG | 0.340472 | 1.1:-19593057 | MS.gene31904:CDS |
| CAGACGAGAAGAACATTAAA+TGG | 0.340627 | 1.1:+19598491 | None:intergenic |
| CGAACCATCCCTTGTTGATA+AGG | 0.343422 | 1.1:-19595176 | MS.gene31904:CDS |
| CCTTCCATCAAGCCGTTTGT+AGG | 0.346388 | 1.1:+19593029 | None:intergenic |
| GGACAAGGCTTAAACTTAAC+TGG | 0.347977 | 1.1:-19590907 | MS.gene31904:CDS |
| AGCCATATTGGCAGATGAAA+TGG | 0.368777 | 1.1:-19598829 | None:intergenic |
| TGAATTTGTTACAGGAGTTA+TGG | 0.377752 | 1.1:-19596221 | MS.gene31904:intron |
| TAGGATCCCCTTTCTATCAT+TGG | 0.390282 | 1.1:+19593305 | None:intergenic |
| GGGCCTTGGCAAAACGGTTC+AGG | 0.392499 | 1.1:-19598808 | MS.gene31904:intron |
| GCATAACATGTTTATCTGAT+AGG | 0.397941 | 1.1:+19593286 | None:intergenic |
| AGCTCCACTTCCAACGCTTC+AGG | 0.400293 | 1.1:+19598333 | None:intergenic |
| AGTGGGCTTTGGATGTCATT+GGG | 0.405126 | 1.1:-19593056 | MS.gene31904:CDS |
| TTGAATTCCTTGTCCAAGTC+AGG | 0.408175 | 1.1:-19598524 | MS.gene31904:CDS |
| TCAAAGCCAAAAGCACCTAT+TGG | 0.413493 | 1.1:+19595105 | None:intergenic |
| AATGAGCAAATACCTGTATA+CGG | 0.441963 | 1.1:+19590786 | None:intergenic |
| TTGACCTACAAACGGCTTGA+TGG | 0.446547 | 1.1:-19593033 | MS.gene31904:CDS |
| TACTTTGGACAGAGTTATAG+AGG | 0.446614 | 1.1:-19595079 | MS.gene31904:CDS |
| GAAGATCGTTGCCATCGAAT+TGG | 0.455443 | 1.1:-19590826 | MS.gene31904:CDS |
| GTGGATAATGTAGGCTTTAG+CGG | 0.460351 | 1.1:-19593157 | MS.gene31904:intron |
| GCTAGGAAACTACATCCAAT+AGG | 0.464188 | 1.1:-19595120 | MS.gene31904:CDS |
| ATCGTAAAATCCTGAAGCGT+TGG | 0.466630 | 1.1:-19598343 | MS.gene31904:CDS |
| AACCAACGCTTGATGCTGAC+AGG | 0.467572 | 1.1:-19598227 | MS.gene31904:CDS |
| TGTCGTAATGGAAAAGCAAC+AGG | 0.468244 | 1.1:-19595458 | MS.gene31904:CDS |
| GTCGTATGAAGTCTATATTA+GGG | 0.474577 | 1.1:-19596107 | MS.gene31904:CDS |
| CAAAGCCTGTAACCGTATAC+AGG | 0.476498 | 1.1:-19590798 | None:intergenic |
| TTGGCAGATGAAATGGGCCT+TGG | 0.483542 | 1.1:-19598822 | None:intergenic |
| CTGCTTGTCTATCAATCTGT+GGG | 0.483659 | 1.1:+19590848 | None:intergenic |
| TGCTTGCTTTCAACTAGAGC+TGG | 0.483853 | 1.1:-19590931 | MS.gene31904:CDS |
| TTATGGTACCAATGATAGAA+AGG | 0.487592 | 1.1:-19593313 | MS.gene31904:CDS |
| TATGGTACCAATGATAGAAA+GGG | 0.493526 | 1.1:-19593312 | MS.gene31904:CDS |
| TCTGCTTGTCTATCAATCTG+TGG | 0.496313 | 1.1:+19590847 | None:intergenic |
| GCCATATTGGCAGATGAAAT+GGG | 0.497867 | 1.1:-19598828 | None:intergenic |
| TATGCTTTCTGCGAAATGTC+GGG | 0.499381 | 1.1:-19593268 | MS.gene31904:intron |
| GTAGAAGATTACCCGGTGAA+TGG | 0.500798 | 1.1:+19595032 | None:intergenic |
| AAACTTAACTGGAGCTGATA+CGG | 0.502508 | 1.1:-19590896 | MS.gene31904:CDS |
| TTTCTGTCCTTCAATATCAC+GGG | 0.502860 | 1.1:-19598574 | MS.gene31904:CDS |
| GAAGTGGAGCTGTGTGCTGA+TGG | 0.505582 | 1.1:-19598321 | MS.gene31904:CDS |
| TGAAATGGGCCTTGGCAAAA+CGG | 0.505899 | 1.1:-19598814 | MS.gene31904:CDS |
| GTGCAGACCCGTGATATTGA+AGG | 0.508019 | 1.1:+19598567 | None:intergenic |
| TTATGCTTTCTGCGAAATGT+CGG | 0.511769 | 1.1:-19593269 | MS.gene31904:CDS |
| AAATCCTGAAGCGTTGGAAG+TGG | 0.516959 | 1.1:-19598337 | MS.gene31904:CDS |
| GGATGAGGCACATGCTTTGA+AGG | 0.517420 | 1.1:-19598300 | MS.gene31904:CDS |
| TGGAGGAGGCAATCCTGACT+TGG | 0.523980 | 1.1:+19598511 | None:intergenic |
| TCATTGGGTTGACCTACAAA+CGG | 0.530604 | 1.1:-19593041 | MS.gene31904:CDS |
| ATCGTGCTGTTTCACAAGCT+CGG | 0.532030 | 1.1:-19595405 | MS.gene31904:CDS |
| GCAGGTTCAATATGTCGTAA+TGG | 0.533569 | 1.1:-19595470 | MS.gene31904:intron |
| TCAACTAGAGCTGGTGGACA+AGG | 0.534658 | 1.1:-19590922 | MS.gene31904:CDS |
| GCAACAGGAACATGCTTACA+AGG | 0.535721 | 1.1:-19595443 | MS.gene31904:CDS |
| ACAGGAGTTATGGTCTATGT+TGG | 0.535877 | 1.1:-19596211 | MS.gene31904:intron |
| ACAATGACTTCTCCATTCAC+CGG | 0.542504 | 1.1:-19595044 | MS.gene31904:CDS |
| TGACCACTCTTCTTTAGTGA+TGG | 0.544085 | 1.1:+19593126 | None:intergenic |
| GTGATATTGAAGGACAGAAA+AGG | 0.551063 | 1.1:+19598577 | None:intergenic |
| AGGATGTTGTTCGCTTTGCT+AGG | 0.551810 | 1.1:-19595137 | MS.gene31904:CDS |
| AATGCTTGATATATTGGAGT+GGG | 0.556860 | 1.1:-19593073 | MS.gene31904:CDS |
| TAATTATTTATTTGCCGTCG+AGG | 0.558803 | 1.1:+19595334 | None:intergenic |
| TTCGCCTTATCAACAAGGGA+TGG | 0.563297 | 1.1:+19595172 | None:intergenic |
| CAATGACTTCTCCATTCACC+GGG | 0.563438 | 1.1:-19595043 | MS.gene31904:intron |
| TGCTTACAAGGAAGCCATTG+AGG | 0.570810 | 1.1:-19595431 | MS.gene31904:CDS |
| AGAAGAACATTAAATGGAGG+AGG | 0.574338 | 1.1:+19598497 | None:intergenic |
| GCTTTGTTTGACCAATTCGA+TGG | 0.581682 | 1.1:+19590815 | None:intergenic |
| TCCCTGTCAGCATCAAGCGT+TGG | 0.583066 | 1.1:+19598225 | None:intergenic |
| CCTACAAACGGCTTGATGGA+AGG | 0.595176 | 1.1:-19593029 | MS.gene31904:intron |
| ATTGAAGGACAGAAAAGGAC+GGG | 0.598964 | 1.1:+19598582 | None:intergenic |
| AACAGCACGATACTCCTCAA+TGG | 0.603233 | 1.1:+19595417 | None:intergenic |
| GAGCTGTGTGCTGATGGATG+AGG | 0.605324 | 1.1:-19598315 | MS.gene31904:CDS |
| TACGGTTGTGATTCATGACA+TGG | 0.608110 | 1.1:-19590878 | MS.gene31904:CDS |
| CCAGCACACAGGTAGCAGAA+AGG | 0.612596 | 1.1:-19590999 | MS.gene31904:intron |
| CAATGCTTGATATATTGGAG+TGG | 0.614638 | 1.1:-19593074 | MS.gene31904:CDS |
| TAAATTCGCCTTATCAACAA+GGG | 0.615776 | 1.1:+19595168 | None:intergenic |
| AAGGCGAATTTATAATGATG+AGG | 0.615979 | 1.1:-19595157 | MS.gene31904:CDS |
| TGCACGCGCAGCATACTGCA+AGG | 0.616432 | 1.1:-19598549 | MS.gene31904:CDS |
| ATAAATTCGCCTTATCAACA+AGG | 0.618328 | 1.1:+19595167 | None:intergenic |
| TTGCTTTCAACTAGAGCTGG+TGG | 0.629655 | 1.1:-19590928 | MS.gene31904:CDS |
| AGGCAATCCTGACTTGGACA+AGG | 0.633867 | 1.1:+19598517 | None:intergenic |
| ATGGTACCAATGATAGAAAG+GGG | 0.637574 | 1.1:-19593311 | MS.gene31904:CDS |
| CTTCCATCACTAAAGAAGAG+TGG | 0.641874 | 1.1:-19593129 | MS.gene31904:CDS |
| ACCAACGCTTGATGCTGACA+GGG | 0.650956 | 1.1:-19598226 | MS.gene31904:CDS |
| GGGAAAGGGAACTAAAGAAG+TGG | 0.662059 | 1.1:-19598607 | MS.gene31904:intron |
| ACGAGAAGAACATTAAATGG+AGG | 0.665822 | 1.1:+19598494 | None:intergenic |
| TATTGAAGGACAGAAAAGGA+CGG | 0.676101 | 1.1:+19598581 | None:intergenic |
| CTATTTGACTCCCAGCACAC+AGG | 0.689141 | 1.1:-19591010 | MS.gene31904:intron |
| ATTGACTAAAGATCAAAACA+CGG | 0.772497 | 1.1:+19593103 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 19590799 | 19598837 | 19590799 | ID=MS.gene31904 |
| chr1.1 | mRNA | 19590799 | 19598837 | 19590799 | ID=MS.gene31904.t1;Parent=MS.gene31904 |
| chr1.1 | exon | 19598809 | 19598837 | 19598809 | ID=MS.gene31904.t1.exon1;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19598809 | 19598837 | 19598809 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| chr1.1 | exon | 19598467 | 19598622 | 19598467 | ID=MS.gene31904.t1.exon2;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19598467 | 19598622 | 19598467 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| chr1.1 | exon | 19598202 | 19598382 | 19598202 | ID=MS.gene31904.t1.exon3;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19598202 | 19598382 | 19598202 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| chr1.1 | exon | 19596044 | 19596229 | 19596044 | ID=MS.gene31904.t1.exon4;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19596044 | 19596229 | 19596044 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| chr1.1 | exon | 19595315 | 19595488 | 19595315 | ID=MS.gene31904.t1.exon5;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19595315 | 19595488 | 19595315 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| chr1.1 | exon | 19595044 | 19595202 | 19595044 | ID=MS.gene31904.t1.exon6;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19595044 | 19595202 | 19595044 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| chr1.1 | exon | 19593269 | 19593346 | 19593269 | ID=MS.gene31904.t1.exon7;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19593269 | 19593346 | 19593269 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| chr1.1 | exon | 19593030 | 19593166 | 19593030 | ID=MS.gene31904.t1.exon8;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19593030 | 19593166 | 19593030 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| chr1.1 | exon | 19590799 | 19591017 | 19590799 | ID=MS.gene31904.t1.exon9;Parent=MS.gene31904.t1 |
| chr1.1 | CDS | 19590799 | 19591017 | 19590799 | ID=cds.MS.gene31904.t1;Parent=MS.gene31904.t1 |
| Gene Sequence |
| Protein sequence |
