AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066321


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 30 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGAAGGCTTACAATCTT+TGG 0.213937 2.1:-31184075 MS.gene066321:CDS
GGATACATGGTCTCAGCTTT+TGG 0.269497 2.1:-31182670 MS.gene066321:CDS
CTGGCTTTGGATACAGCTAT+TGG 0.290596 2.1:-31182894 MS.gene066321:CDS
ATTGAAGGCTTACAATCTTT+GGG 0.290934 2.1:-31184074 MS.gene066321:CDS
GAGATATATAACTTTGCTTT+TGG 0.322910 2.1:-31183760 MS.gene066321:CDS
TTATTGCAGGATTGATTCTC+TGG 0.338350 2.1:-31183979 MS.gene066321:intron
GGCTTATTACCTGCAAGAAT+TGG 0.342538 2.1:+31182817 None:intergenic
TTCAGCTCAGAGCGCATATA+TGG 0.364877 2.1:+31183936 None:intergenic
GGCATAACAAAGCAATATCT+AGG 0.382983 2.1:-31182692 MS.gene066321:CDS
ACATTGGTGCCAATTCTTGC+AGG 0.391466 2.1:-31182826 MS.gene066321:intron
TGGCTTTGGATACAGCTATT+GGG 0.410722 2.1:-31182893 MS.gene066321:CDS
TGCTGAGAAGCAGTGGCCTC+TGG 0.419876 2.1:-31182853 MS.gene066321:CDS
GTCGATTATCTGAACGAGAA+TGG 0.468378 2.1:-31181893 MS.gene066321:CDS
CTTTCATGGCACATGAAGGC+TGG 0.477640 2.1:-31184128 MS.gene066321:CDS
TTGACTACAGCAGTTGCAAA+TGG 0.481977 2.1:+31186760 None:intergenic
ATTATGATGCTGAAGGTGCT+TGG 0.540689 2.1:-31181937 MS.gene066321:CDS
AGTTCTTTCATGGCACATGA+AGG 0.546918 2.1:-31184132 MS.gene066321:CDS
TGGATACAGCTATTGGGATG+TGG 0.552347 2.1:-31182887 MS.gene066321:CDS
TTGAAGGCTTACAATCTTTG+GGG 0.561512 2.1:-31184073 MS.gene066321:intron
ACAAACTCATCAATAAGATA+CGG 0.563427 2.1:+31181914 None:intergenic
AAGCAATATCTAGGGATACA+TGG 0.569704 2.1:-31182683 MS.gene066321:CDS
TATTATTTGCTGAGAAGCAG+TGG 0.570737 2.1:-31182860 MS.gene066321:CDS
GCATAACAAAGCAATATCTA+GGG 0.579769 2.1:-31182691 MS.gene066321:CDS
CATACCATTACTATGTCTTG+AGG 0.583443 2.1:+31185219 None:intergenic
AATCGGTTATCTGACCATGT+TGG 0.594215 2.1:+31181864 None:intergenic
TTATCTGATTATGATGCTGA+AGG 0.610431 2.1:-31181944 MS.gene066321:CDS
GGATCCTCAAGACATAGTAA+TGG 0.646312 2.1:-31185223 MS.gene066321:intron
AGTGGCCTCTGGTTGAACAT+TGG 0.651904 2.1:-31182842 MS.gene066321:CDS
TGGCACCAATGTTCAACCAG+AGG 0.679329 2.1:+31182837 None:intergenic
GAGAATGGTGTTAACCAACA+TGG 0.694710 2.1:-31181878 MS.gene066321:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTTTATTGTAAAATAT+AGG - chr2.1:31183663-31183682 MS.gene066321:intron 10.0%
!! AAGCTTAAAATATTAAAACA+CGG - chr2.1:31182524-31182543 MS.gene066321:intron 15.0%
!! AATACAATCTGTTTATATTA+TGG + chr2.1:31185602-31185621 None:intergenic 15.0%
!! GATGTTACTAATTTATTTAA+TGG + chr2.1:31182607-31182626 None:intergenic 15.0%
!!! ATGAACTAGTATATTTTATT+CGG + chr2.1:31185018-31185037 None:intergenic 15.0%
!!! CAAATTAAGAAATCATTTTT+AGG + chr2.1:31182272-31182291 None:intergenic 15.0%
!!! GAAATTATATTTTCTGTTTT+TGG - chr2.1:31184821-31184840 MS.gene066321:intron 15.0%
!!! TGTTTTAATATTTTAAGCTT+TGG + chr2.1:31182524-31182543 None:intergenic 15.0%
!!! TTTTACAATAAAAGAAATTC+TGG + chr2.1:31183660-31183679 None:intergenic 15.0%
!! AAATATCCAGAATCATAATA+AGG - chr2.1:31186132-31186151 MS.gene066321:intron 20.0%
!! ATAATAAGGAAAAGTAAATG+TGG - chr2.1:31186146-31186165 MS.gene066321:intron 20.0%
!! ATAATCAGATGATACTAAAA+AGG + chr2.1:31185510-31185529 None:intergenic 20.0%
!! ATACAATGTGATTTGATAAA+GGG - chr2.1:31182399-31182418 MS.gene066321:intron 20.0%
!! ATGAAAAATTCAGTTACAAT+AGG + chr2.1:31183129-31183148 None:intergenic 20.0%
!! ATGATAATAACCAAGTAAAA+TGG + chr2.1:31185063-31185082 None:intergenic 20.0%
!! ATTCTAATCTTCAAAATTAG+AGG - chr2.1:31182746-31182765 MS.gene066321:intron 20.0%
!! CAATTAAACTTGAATGAATA+TGG + chr2.1:31183357-31183376 None:intergenic 20.0%
!! CTAATGAAATAGAAAAAGTA+GGG - chr2.1:31181976-31181995 MS.gene066321:intron 20.0%
!! TCATTTGACTATATTAAATG+AGG + chr2.1:31183493-31183512 None:intergenic 20.0%
!!! AATGTGCAATATTTTGTAAT+TGG - chr2.1:31183891-31183910 MS.gene066321:intron 20.0%
!!! ACAACATTCTAAAAAACAAT+AGG - chr2.1:31182668-31182687 MS.gene066321:CDS 20.0%
!!! ATGTCATTGTTATTCAAATT+GGG + chr2.1:31182361-31182380 None:intergenic 20.0%
!!! CTTTTATTGTAAAATATAGG+TGG - chr2.1:31183666-31183685 MS.gene066321:intron 20.0%
!!! TTGGTTTTGTAAAAAAGTAA+TGG + chr2.1:31182126-31182145 None:intergenic 20.0%
!!! TTTGTAAAAAAGTAATGGAA+TGG + chr2.1:31182121-31182140 None:intergenic 20.0%
! AAACTATGAAAAAGATAGGA+GGG - chr2.1:31183591-31183610 MS.gene066321:intron 25.0%
! AAATGCAGAAATGTTTATGA+TGG - chr2.1:31183706-31183725 MS.gene066321:intron 25.0%
! AAGAATCAAAACTCAAACAT+TGG + chr2.1:31183320-31183339 None:intergenic 25.0%
! AAGTAGGGATAAAATGTAAT+TGG - chr2.1:31181991-31182010 MS.gene066321:intron 25.0%
! AAGTGAATACAAATTCTTCT+CGG + chr2.1:31186527-31186546 None:intergenic 25.0%
! AATAACCAAGTAAAATGGAA+GGG + chr2.1:31185058-31185077 None:intergenic 25.0%
! AATATAGTGTAACTTCATAG+AGG + chr2.1:31186624-31186643 None:intergenic 25.0%
! ACAAACTCATCAATAAGATA+CGG + chr2.1:31186712-31186731 None:intergenic 25.0%
! ATATTGCACATTCACAATAT+AGG + chr2.1:31183883-31183902 None:intergenic 25.0%
! CTTAAAAAGCTCAAATAAAC+TGG + chr2.1:31182700-31182719 None:intergenic 25.0%
! GATACAATGTGATTTGATAA+AGG - chr2.1:31182398-31182417 MS.gene066321:intron 25.0%
! GCTAATGAAATAGAAAAAGT+AGG - chr2.1:31181975-31181994 MS.gene066321:intron 25.0%
! GTTCTATCATAAACCAAATT+TGG + chr2.1:31184284-31184303 None:intergenic 25.0%
! TAATAACCAAGTAAAATGGA+AGG + chr2.1:31185059-31185078 None:intergenic 25.0%
! TACTGGAGCTAATATATATT+TGG + chr2.1:31183767-31183786 None:intergenic 25.0%
! TATAAACAAGAAACAGTGAA+TGG - chr2.1:31181926-31181945 MS.gene066321:CDS 25.0%
! TATTGCACATTCACAATATA+GGG + chr2.1:31183882-31183901 None:intergenic 25.0%
! TCAGATCTTCAATTTATCAT+TGG + chr2.1:31184803-31184822 None:intergenic 25.0%
! TGTAATGACTAAAATTCAGT+AGG - chr2.1:31183561-31183580 MS.gene066321:intron 25.0%
! TGTGAAACTATGAAAAAGAT+AGG - chr2.1:31183587-31183606 MS.gene066321:intron 25.0%
! TTAAATTAGTATAAGCCAAC+AGG + chr2.1:31184981-31185000 None:intergenic 25.0%
! TTGAATTCATGTTAATCCTA+TGG + chr2.1:31182989-31183008 None:intergenic 25.0%
!! AAAAAAGTAATGGAATGGAA+TGG + chr2.1:31182116-31182135 None:intergenic 25.0%
!! AATTTTATAAGACCTTCAAC+CGG + chr2.1:31184626-31184645 None:intergenic 25.0%
!! AATTTTCATGATACTGTAAC+AGG - chr2.1:31181884-31181903 MS.gene066321:CDS 25.0%
!! ACTTTTACTGTGTATAAAGA+TGG - chr2.1:31186543-31186562 MS.gene066321:intron 25.0%
!! ACTTTTCCTTATTATGATTC+TGG + chr2.1:31186141-31186160 None:intergenic 25.0%
!! AGGTCTTATAAAATTATTGC+AGG - chr2.1:31184631-31184650 MS.gene066321:intron 25.0%
!! ATACAAGTTAACTTTTTGCA+GGG - chr2.1:31185696-31185715 MS.gene066321:intron 25.0%
!! ATCATTTCATTTTCAGATCA+TGG - chr2.1:31183443-31183462 MS.gene066321:intron 25.0%
!! CAAGTTAGAAGATTTTCTAT+TGG - chr2.1:31185859-31185878 MS.gene066321:intron 25.0%
!! GAGATATATAACTTTGCTTT+TGG - chr2.1:31184863-31184882 MS.gene066321:intron 25.0%
!! GATGTCATTGTTATTCAAAT+TGG + chr2.1:31182362-31182381 None:intergenic 25.0%
!! TATACAAGTTAACTTTTTGC+AGG - chr2.1:31185695-31185714 MS.gene066321:intron 25.0%
!! TTTTTCCTAGAAGAAAATGA+TGG + chr2.1:31183741-31183760 None:intergenic 25.0%
!!! AATGTCGTTTCTTTTTTGAT+GGG - chr2.1:31182449-31182468 MS.gene066321:intron 25.0%
!!! ACCTTTAGAATAAGTTCAAT+AGG - chr2.1:31186006-31186025 MS.gene066321:intron 25.0%
!!! GTTTTTTAGAATGTTGTAGT+GGG + chr2.1:31182665-31182684 None:intergenic 25.0%
!!! TAATGTCGTTTCTTTTTTGA+TGG - chr2.1:31182448-31182467 MS.gene066321:intron 25.0%
!!! TATTTGAGCTTTTTAAGTGT+CGG - chr2.1:31182703-31182722 MS.gene066321:intron 25.0%
!!! TGTTTTTTAGAATGTTGTAG+TGG + chr2.1:31182666-31182685 None:intergenic 25.0%
!!! TTTTTTACAAAACCAAACAC+TGG - chr2.1:31182130-31182149 MS.gene066321:intron 25.0%
AAAAGCTCAAATAAACTGGT+AGG + chr2.1:31182696-31182715 None:intergenic 30.0%
AAAATAGGCTTAGATGGTTT+GGG - chr2.1:31184117-31184136 MS.gene066321:CDS 30.0%
AAACATCACATGGTTATTCA+TGG - chr2.1:31183634-31183653 MS.gene066321:intron 30.0%
AACCATTAGAAAGGATTTAG+AGG - chr2.1:31184244-31184263 MS.gene066321:intron 30.0%
AACTATGAAAAAGATAGGAG+GGG - chr2.1:31183592-31183611 MS.gene066321:intron 30.0%
AATAGTTTAGCTGATACAGA+AGG - chr2.1:31186381-31186400 MS.gene066321:intron 30.0%
ACCTAGTTTCAACTAATTCT+AGG + chr2.1:31182314-31182333 None:intergenic 30.0%
AGATCCATTATTTGTAGCAA+TGG - chr2.1:31183809-31183828 MS.gene066321:intron 30.0%
AGTCCTAAACCTATTGAATA+GGG + chr2.1:31185096-31185115 None:intergenic 30.0%
ATAACCAAGTAAAATGGAAG+GGG + chr2.1:31185057-31185076 None:intergenic 30.0%
ATAATAATCCTCACACTCAT+TGG - chr2.1:31183835-31183854 MS.gene066321:intron 30.0%
ATTGAAGGCTTACAATCTTT+GGG - chr2.1:31184549-31184568 MS.gene066321:intron 30.0%
CAAAGATCACTAATGTAATC+AGG + chr2.1:31186282-31186301 None:intergenic 30.0%
CATTGAATACACTCCAATTT+GGG - chr2.1:31182034-31182053 MS.gene066321:intron 30.0%
CCTAGTTTCAACTAATTCTA+GGG + chr2.1:31182313-31182332 None:intergenic 30.0%
CTCAACATGTGTTTATAAGT+GGG - chr2.1:31185173-31185192 MS.gene066321:intron 30.0%
CTGAACATGTGTTTATAAGT+GGG - chr2.1:31185403-31185422 MS.gene066321:intron 30.0%
GAAACTATGAAAAAGATAGG+AGG - chr2.1:31183590-31183609 MS.gene066321:intron 30.0%
GCATAACAAAGCAATATCTA+GGG - chr2.1:31185932-31185951 MS.gene066321:intron 30.0%
GCCTATTGAACTTATTCTAA+AGG + chr2.1:31186010-31186029 None:intergenic 30.0%
GGAAACAGAAATGATCAAAT+AGG + chr2.1:31183223-31183242 None:intergenic 30.0%
GTAGAAAAGTGGTAGAAAAT+AGG - chr2.1:31184102-31184121 MS.gene066321:CDS 30.0%
GTCATTACATATTCGTAACT+TGG + chr2.1:31183550-31183569 None:intergenic 30.0%
TAGTCCTAAACCTATTGAAT+AGG + chr2.1:31185097-31185116 None:intergenic 30.0%
TATTGGAGAAACCATTAGAA+AGG - chr2.1:31184235-31184254 MS.gene066321:intron 30.0%
TCAACATGTGTTTATAAGTG+GGG - chr2.1:31185174-31185193 MS.gene066321:intron 30.0%
TCTCTTAAGTGTTAACTCTA+TGG + chr2.1:31182216-31182235 None:intergenic 30.0%
TGAACATGTGTTTATAAGTG+GGG - chr2.1:31185404-31185423 MS.gene066321:intron 30.0%
TGGTTTATGATAGAACACTA+TGG - chr2.1:31184288-31184307 MS.gene066321:intron 30.0%
TGTAAATAGTACAGTGTGTT+GGG - chr2.1:31183940-31183959 MS.gene066321:CDS 30.0%
TTATCTGATTATGATGCTGA+AGG - chr2.1:31186679-31186698 MS.gene066321:intron 30.0%
TTCTCCATTGCTACAAATAA+TGG + chr2.1:31183816-31183835 None:intergenic 30.0%
TTCTCGTATTTATAAGCCAT+AGG - chr2.1:31182970-31182989 MS.gene066321:intron 30.0%
TTGCAAATGGAAAAACACAT+AGG + chr2.1:31181853-31181872 None:intergenic 30.0%
TTGTAAATAGTACAGTGTGT+TGG - chr2.1:31183939-31183958 MS.gene066321:CDS 30.0%
! AATTTCATTGCTACTTACTC+AGG - chr2.1:31185905-31185924 MS.gene066321:intron 30.0%
! ACAATCCATCATTTTCTTCT+AGG - chr2.1:31183733-31183752 MS.gene066321:intron 30.0%
! ATTATCACATTTTACACCAG+TGG - chr2.1:31186441-31186460 MS.gene066321:intron 30.0%
! ATTTTATAAGACCTTCAACC+GGG + chr2.1:31184625-31184644 None:intergenic 30.0%
! CAATAAACAAGTTGACTGTT+AGG + chr2.1:31183091-31183110 None:intergenic 30.0%
! GCATATATGGTATCTTTTCA+CGG + chr2.1:31184677-31184696 None:intergenic 30.0%
! TATATCTCGCGAAATTTTTC+TGG + chr2.1:31184851-31184870 None:intergenic 30.0%
! TATGTGTGAGTTTTCCAAAA+AGG - chr2.1:31184521-31184540 MS.gene066321:intron 30.0%
! TTTCATTTTCAGATCATGGA+TGG - chr2.1:31183447-31183466 MS.gene066321:intron 30.0%
!! ATATAACTTTGCTTTTGGCT+GGG - chr2.1:31184868-31184887 MS.gene066321:intron 30.0%
!! TATATAACTTTGCTTTTGGC+TGG - chr2.1:31184867-31184886 MS.gene066321:intron 30.0%
!! TCATCGTTTTAGACTAGAAT+CGG + chr2.1:31186779-31186798 None:intergenic 30.0%
!! TTCTACCACTTTTCTACTAT+AGG + chr2.1:31184099-31184118 None:intergenic 30.0%
!!! ATGTCGTTTCTTTTTTGATG+GGG - chr2.1:31182450-31182469 MS.gene066321:intron 30.0%
!!! TGCAATGTTTTGATATCTAC+TGG + chr2.1:31183784-31183803 None:intergenic 30.0%
AAATCATGAGAGAAACGACA+TGG + chr2.1:31186186-31186205 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr2.1:31184172-31184191 MS.gene066321:intron 35.0%
AAGCAATATCTAGGGATACA+TGG - chr2.1:31185940-31185959 MS.gene066321:intron 35.0%
AATAGCTACTGTTTGCAAGA+TGG + chr2.1:31186219-31186238 None:intergenic 35.0%
AATATGCCAGCCTAAGAAAA+AGG + chr2.1:31186583-31186602 None:intergenic 35.0%
ACTAGAAAATGTTCCAGCAA+AGG + chr2.1:31182905-31182924 None:intergenic 35.0%
ACTATGAAAAAGATAGGAGG+GGG - chr2.1:31183593-31183612 MS.gene066321:intron 35.0%
ACTGTTAGGACTTGGAATAA+AGG + chr2.1:31183077-31183096 None:intergenic 35.0%
ACTTGTATATTACTGTTGCG+TGG + chr2.1:31185684-31185703 None:intergenic 35.0%
ACTTTGTCCTAGTGTATTGT+TGG + chr2.1:31186349-31186368 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr2.1:31184032-31184051 MS.gene066321:intron 35.0%
AGCCTTCTCTATAATCCATT+GGG - chr2.1:31185264-31185283 MS.gene066321:intron 35.0%
AGGTTGCATCCATATTATGA+GGG + chr2.1:31186037-31186056 None:intergenic 35.0%
AGTCTAGTTAAAAGAGGTAG+AGG - chr2.1:31184197-31184216 MS.gene066321:intron 35.0%
AGTGAATGGAAAGAAGAAAC+GGG - chr2.1:31181940-31181959 MS.gene066321:CDS 35.0%
ATGCTACAAAGCTTCCATTA+TGG - chr2.1:31184408-31184427 MS.gene066321:intron 35.0%
ATTGTTTCCCCCTATTCAAT+AGG - chr2.1:31185084-31185103 MS.gene066321:intron 35.0%
ATTTGGGAGGAATGAAAACT+TGG - chr2.1:31182050-31182069 MS.gene066321:intron 35.0%
CAACATGTGTTTATAAGTGG+GGG - chr2.1:31185175-31185194 MS.gene066321:intron 35.0%
CAGCACAATATCCACATTAA+GGG + chr2.1:31186060-31186079 None:intergenic 35.0%
CAGTGAATGGAAAGAAGAAA+CGG - chr2.1:31181939-31181958 MS.gene066321:CDS 35.0%
CATACCATTACTATGTCTTG+AGG + chr2.1:31183407-31183426 None:intergenic 35.0%
CATATTGCCATACACTTTCT+TGG - chr2.1:31186306-31186325 MS.gene066321:intron 35.0%
CATTGAAGGCTTACAATCTT+TGG - chr2.1:31184548-31184567 MS.gene066321:intron 35.0%
CCAAATTGGAGTGTATTCAA+TGG + chr2.1:31182036-31182055 None:intergenic 35.0%
CCACTTATAAACACATGTTC+AGG + chr2.1:31185405-31185424 None:intergenic 35.0%
CCACTTATAAACACATGTTG+AGG + chr2.1:31185175-31185194 None:intergenic 35.0%
CCATTGAATACACTCCAATT+TGG - chr2.1:31182033-31182052 MS.gene066321:intron 35.0%
CCCTAGAATTAGTTGAAACT+AGG - chr2.1:31182310-31182329 MS.gene066321:intron 35.0%
CCTCAACATGTGTTTATAAG+TGG - chr2.1:31185172-31185191 MS.gene066321:intron 35.0%
CCTGAACATGTGTTTATAAG+TGG - chr2.1:31185402-31185421 MS.gene066321:intron 35.0%
CTAGAAAATGTTCCAGCAAA+GGG + chr2.1:31182904-31182923 None:intergenic 35.0%
CTATGTTTGGATTGATAGAG+TGG + chr2.1:31182193-31182212 None:intergenic 35.0%
CTCTCTCTCTCTCTTTATAA+TGG + chr2.1:31184065-31184084 None:intergenic 35.0%
CTGTTAGGACTTGGAATAAA+GGG + chr2.1:31183076-31183095 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr2.1:31184116-31184135 MS.gene066321:CDS 35.0%
GAACATGTGTTTATAAGTGG+GGG - chr2.1:31185405-31185424 MS.gene066321:intron 35.0%
GAATTCCAAATCCTCCTAAA+GGG - chr2.1:31182943-31182962 MS.gene066321:intron 35.0%
GACATCAAAAGAATACGACT+GGG - chr2.1:31182376-31182395 MS.gene066321:intron 35.0%
GACATTAAAACCCACTTTCT+TGG + chr2.1:31182435-31182454 None:intergenic 35.0%
GACCTCTAAATCCTTTCTAA+TGG + chr2.1:31184249-31184268 None:intergenic 35.0%
GCATTTCATCTGTAACTTAC+TGG + chr2.1:31183692-31183711 None:intergenic 35.0%
GGCATAACAAAGCAATATCT+AGG - chr2.1:31185931-31185950 MS.gene066321:intron 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr2.1:31184169-31184188 MS.gene066321:intron 35.0%
GGTTCGTAAACATAAATGGT+GGG + chr2.1:31185326-31185345 None:intergenic 35.0%
GTCCTAAACCTATTGAATAG+GGG + chr2.1:31185095-31185114 None:intergenic 35.0%
GTTAACTCTATGGCTATGTT+TGG + chr2.1:31182206-31182225 None:intergenic 35.0%
TAGCACCTATAGTAGAAAAG+TGG - chr2.1:31184091-31184110 MS.gene066321:CDS 35.0%
TAGTTAAGCCACACAAAGAA+GGG + chr2.1:31184935-31184954 None:intergenic 35.0%
TATAAAGAGAGAGAGAGAGT+GGG - chr2.1:31184066-31184085 MS.gene066321:intron 35.0%
TATAAAGATGGCAATGCAAG+TGG - chr2.1:31186555-31186574 MS.gene066321:intron 35.0%
TCCAAAAAGGAGTTCATTGA+AGG - chr2.1:31184534-31184553 MS.gene066321:intron 35.0%
TCCATTATGGTTAGAGTTCA+GGG - chr2.1:31184421-31184440 MS.gene066321:intron 35.0%
TCCTAAACCTATTGAATAGG+GGG + chr2.1:31185094-31185113 None:intergenic 35.0%
TGAAAACTTGGATGAATGAG+TGG - chr2.1:31182062-31182081 MS.gene066321:intron 35.0%
TGAATTCCAAATCCTCCTAA+AGG - chr2.1:31182942-31182961 MS.gene066321:intron 35.0%
TGACAATATTTGACGAGACT+AGG + chr2.1:31183244-31183263 None:intergenic 35.0%
TGACATCAAAAGAATACGAC+TGG - chr2.1:31182375-31182394 MS.gene066321:intron 35.0%
TGAGAAGTGAAAACATCACA+TGG - chr2.1:31183624-31183643 MS.gene066321:intron 35.0%
TGATACCATCTTAGAAATCG+TGG + chr2.1:31185243-31185262 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr2.1:31184111-31184130 MS.gene066321:CDS 35.0%
TGGTTCGTAAACATAAATGG+TGG + chr2.1:31185327-31185346 None:intergenic 35.0%
TGTTAGGACTTGGAATAAAG+GGG + chr2.1:31183075-31183094 None:intergenic 35.0%
TTAGTTAAGCCACACAAAGA+AGG + chr2.1:31184936-31184955 None:intergenic 35.0%
TTATAAAGAGAGAGAGAGAG+TGG - chr2.1:31184065-31184084 MS.gene066321:intron 35.0%
TTCCATTATGGTTAGAGTTC+AGG - chr2.1:31184420-31184439 MS.gene066321:intron 35.0%
TTGAAGGCTTACAATCTTTG+GGG - chr2.1:31184550-31184569 MS.gene066321:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr2.1:31184168-31184187 None:intergenic 35.0%
TTGATGGGGAATGCTTTAAT+TGG - chr2.1:31182464-31182483 MS.gene066321:intron 35.0%
TTGGAGTGTATTCAATGGAA+TGG + chr2.1:31182031-31182050 None:intergenic 35.0%
! AGTTTTCATTCCTCCCAAAT+TGG + chr2.1:31182050-31182069 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATT+TGG - chr2.1:31184268-31184287 MS.gene066321:intron 35.0%
! GCTTGGTTCGTAAACATAAA+TGG + chr2.1:31185330-31185349 None:intergenic 35.0%
! TATTATTTGCTGAGAAGCAG+TGG - chr2.1:31185763-31185782 MS.gene066321:intron 35.0%
! TCTGCATTTTCCAAGAAAGT+GGG - chr2.1:31182422-31182441 MS.gene066321:intron 35.0%
! TGTGGCTTAACTAATTTGCA+TGG - chr2.1:31184942-31184961 MS.gene066321:intron 35.0%
! TTATTGCAGGATTGATTCTC+TGG - chr2.1:31184644-31184663 MS.gene066321:intron 35.0%
!! AGTTTGTTAGGATTGGAGTT+AGG + chr2.1:31183052-31183071 None:intergenic 35.0%
!! ATTGGAGTTAGGTTGATTAG+GGG + chr2.1:31183041-31183060 None:intergenic 35.0%
!! GATTGGAGTTAGGTTGATTA+GGG + chr2.1:31183042-31183061 None:intergenic 35.0%
!! TTGTTTCTGTAACACAATCC+CGG - chr2.1:31184604-31184623 MS.gene066321:intron 35.0%
!! TTTAAGTGTCGGTCAATGTT+AGG - chr2.1:31182714-31182733 MS.gene066321:intron 35.0%
!! TTTTGCAGCTAGTTCTTTCA+TGG - chr2.1:31184481-31184500 MS.gene066321:intron 35.0%
AAATAGTACAGTGTGTTGGG+TGG - chr2.1:31183943-31183962 MS.gene066321:CDS 40.0%
AAGAAGATAACCTTGCACTC+AGG - chr2.1:31182873-31182892 MS.gene066321:CDS 40.0%
AAGATGAACGTATGAACCCT+AGG - chr2.1:31184709-31184728 MS.gene066321:intron 40.0%
AAGTAAGTGTAGCAGAGATG+AGG - chr2.1:31183987-31184006 MS.gene066321:intron 40.0%
AATACGAGAAACCACCCTTT+AGG + chr2.1:31182960-31182979 None:intergenic 40.0%
AATCGGTTATCTGACCATGT+TGG + chr2.1:31186762-31186781 None:intergenic 40.0%
ACCATCTTAGAAATCGTGGT+TGG + chr2.1:31185239-31185258 None:intergenic 40.0%
AGTGTTAAAGAGTCCCACAT+CGG - chr2.1:31185138-31185157 MS.gene066321:intron 40.0%
AGTTAAGCCACACAAAGAAG+GGG + chr2.1:31184934-31184953 None:intergenic 40.0%
AGTTCTTTCATGGCACATGA+AGG - chr2.1:31184491-31184510 MS.gene066321:intron 40.0%
ATAAAGAGAGAGAGAGAGTG+GGG - chr2.1:31184067-31184086 MS.gene066321:intron 40.0%
ATTGGAATGCCTTAGGTAAC+TGG - chr2.1:31184446-31184465 MS.gene066321:intron 40.0%
CAAGGAACCAACAATACACT+AGG - chr2.1:31186339-31186358 MS.gene066321:intron 40.0%
CACAATATCCACATTAAGGG+AGG + chr2.1:31186057-31186076 None:intergenic 40.0%
CAGCCTTCTCTATAATCCAT+TGG - chr2.1:31185263-31185282 MS.gene066321:intron 40.0%
CCATCTTAGAAATCGTGGTT+GGG + chr2.1:31185238-31185257 None:intergenic 40.0%
CCGTCTTAGAATTCGTAGTT+GGG + chr2.1:31185473-31185492 None:intergenic 40.0%
CTAACACAACCTCACAAAAC+CGG + chr2.1:31185214-31185233 None:intergenic 40.0%
CTTGGATGAATGAGTGGTAT+TGG - chr2.1:31182068-31182087 MS.gene066321:intron 40.0%
GAGGAGAGTCTAGTTAAAAG+AGG - chr2.1:31184191-31184210 MS.gene066321:intron 40.0%
GAGGTTGCATCCATATTATG+AGG + chr2.1:31186038-31186057 None:intergenic 40.0%
GCAGCACAATATCCACATTA+AGG + chr2.1:31186061-31186080 None:intergenic 40.0%
GGATCCTCAAGACATAGTAA+TGG - chr2.1:31183400-31183419 MS.gene066321:intron 40.0%
GGATTTAGAGGTCAATGAGT+TGG - chr2.1:31184256-31184275 MS.gene066321:intron 40.0%
GGCTTATTACCTGCAAGAAT+TGG + chr2.1:31185809-31185828 None:intergenic 40.0%
GTCGATTATCTGAACGAGAA+TGG - chr2.1:31186730-31186749 MS.gene066321:CDS 40.0%
GTGAATGGAAAGAAGAAACG+GGG - chr2.1:31181941-31181960 MS.gene066321:CDS 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr2.1:31184026-31184045 MS.gene066321:intron 40.0%
GTTTCTCCAATAGTTTCCCT+AGG + chr2.1:31184227-31184246 None:intergenic 40.0%
TAAACATCCCCAGTTACCTA+AGG + chr2.1:31184458-31184477 None:intergenic 40.0%
TAGAGTCAGATTCCAGTGTT+TGG + chr2.1:31182145-31182164 None:intergenic 40.0%
TCAGATCATGGATGGTTTCA+TGG - chr2.1:31183455-31183474 MS.gene066321:intron 40.0%
TCCCCCTATTCAATAGGTTT+AGG - chr2.1:31185090-31185109 MS.gene066321:intron 40.0%
TGAATACACTCCAATTTGGG+AGG - chr2.1:31182037-31182056 MS.gene066321:intron 40.0%
TGGTGCAACTGGATGATTAT+TGG - chr2.1:31183855-31183874 MS.gene066321:intron 40.0%
TGGTGGAATGGAATAGAATG+GGG + chr2.1:31182173-31182192 None:intergenic 40.0%
TGTTTGGATTGATAGAGTGG+TGG + chr2.1:31182190-31182209 None:intergenic 40.0%
TTGACTACAGCAGTTGCAAA+TGG + chr2.1:31181866-31181885 None:intergenic 40.0%
TTGGAATGCCTTAGGTAACT+GGG - chr2.1:31184447-31184466 MS.gene066321:intron 40.0%
TTTGCAGGGTCAAAAATCTC+TGG - chr2.1:31185710-31185729 MS.gene066321:intron 40.0%
! ACAAGTTGACTGTTAGGACT+TGG + chr2.1:31183085-31183104 None:intergenic 40.0%
! AGTGGTGGAATGGAATAGAA+TGG + chr2.1:31182175-31182194 None:intergenic 40.0%
! AGTTACCTAAGGCATTCCAA+TGG + chr2.1:31184447-31184466 None:intergenic 40.0%
! ATTGCCCCTTCCATTTTACT+TGG - chr2.1:31185050-31185069 MS.gene066321:intron 40.0%
! CCCAACTACGAATTCTAAGA+CGG - chr2.1:31185470-31185489 MS.gene066321:intron 40.0%
! GAGAATGGTGTTAACCAACA+TGG - chr2.1:31186745-31186764 MS.gene066321:CDS 40.0%
! GATGAATGAGTGGTATTGGA+TGG - chr2.1:31182072-31182091 MS.gene066321:intron 40.0%
! GATGTTTTCTTGTCATGTGC+AGG - chr2.1:31183376-31183395 MS.gene066321:intron 40.0%
! GCAAGTGGTACCTTTTTCTT+AGG - chr2.1:31186570-31186589 MS.gene066321:intron 40.0%
! GCCTTCAATGAACTCCTTTT+TGG + chr2.1:31184538-31184557 None:intergenic 40.0%
! GGAATAAAGGGGAGTTTGTT+AGG + chr2.1:31183064-31183083 None:intergenic 40.0%
! GTCTGCATTTTCCAAGAAAG+TGG - chr2.1:31182421-31182440 MS.gene066321:intron 40.0%
! GTGGTGGAATGGAATAGAAT+GGG + chr2.1:31182174-31182193 None:intergenic 40.0%
! TCAAATTGGGCGCTAAGTTT+TGG + chr2.1:31182348-31182367 None:intergenic 40.0%
! TCGTAAACATAAATGGTGGG+TGG + chr2.1:31185323-31185342 None:intergenic 40.0%
!! AAAGGGGAGTTTGTTAGGAT+TGG + chr2.1:31183059-31183078 None:intergenic 40.0%
!! ATTATGATGCTGAAGGTGCT+TGG - chr2.1:31186686-31186705 MS.gene066321:intron 40.0%
!! CAACTACGAATTCTAAGACG+GGG - chr2.1:31185472-31185491 MS.gene066321:intron 40.0%
!! CCAACTACGAATTCTAAGAC+GGG - chr2.1:31185471-31185490 MS.gene066321:intron 40.0%
!! CTAGTGTATTGTTGGTTCCT+TGG + chr2.1:31186341-31186360 None:intergenic 40.0%
!! GGATTGGAGTTAGGTTGATT+AGG + chr2.1:31183043-31183062 None:intergenic 40.0%
!! TGGCTTTGGATACAGCTATT+GGG - chr2.1:31185730-31185749 MS.gene066321:intron 40.0%
!! TTAGGGGTTGGTTGTTAAGT+TGG + chr2.1:31183025-31183044 None:intergenic 40.0%
!!! TCAGCTTTTGGAGTTTGCAA+AGG - chr2.1:31185965-31185984 MS.gene066321:intron 40.0%
AAAGAGGTAGAGGAAGACCT+AGG - chr2.1:31184207-31184226 MS.gene066321:intron 45.0%
AAATGTTCCAGCAAAGGGAG+AGG + chr2.1:31182899-31182918 None:intergenic 45.0%
AACCCTAGGCATTCAGATCA+TGG - chr2.1:31184723-31184742 MS.gene066321:intron 45.0%
AAGAGGTAGAGGAAGACCTA+GGG - chr2.1:31184208-31184227 MS.gene066321:intron 45.0%
AAGCCATGATCTGAATGCCT+AGG + chr2.1:31184729-31184748 None:intergenic 45.0%
AGACTTACAGCTGACATGAC+TGG + chr2.1:31186479-31186498 None:intergenic 45.0%
AGCCATGATCTGAATGCCTA+GGG + chr2.1:31184728-31184747 None:intergenic 45.0%
AGGCCATCGTTTGTTTGATG+TGG + chr2.1:31185385-31185404 None:intergenic 45.0%
CATGAGAGAAACGACATGGA+AGG + chr2.1:31186182-31186201 None:intergenic 45.0%
CCATACACTTTCTTGGCATG+TGG - chr2.1:31186313-31186332 MS.gene066321:intron 45.0%
CCCGTCTTAGAATTCGTAGT+TGG + chr2.1:31185474-31185493 None:intergenic 45.0%
CTGCTATCAGGTTTCGCTAT+CGG - chr2.1:31185291-31185310 MS.gene066321:intron 45.0%
CTGGCAATAAATACAGCCAC+TGG + chr2.1:31186460-31186479 None:intergenic 45.0%
GAAAGAAGAAACGGGGAATG+AGG - chr2.1:31181948-31181967 MS.gene066321:CDS 45.0%
GCCCTGAACTCTAACCATAA+TGG + chr2.1:31184425-31184444 None:intergenic 45.0%
GGAAGACCTAGGGAAACTAT+TGG - chr2.1:31184218-31184237 MS.gene066321:intron 45.0%
GGAAGTAAGTGATGACCTGT+TGG - chr2.1:31184963-31184982 MS.gene066321:intron 45.0%
GGCCATCGTTTGTTTGATGT+GGG + chr2.1:31185384-31185403 None:intergenic 45.0%
GTCCCACATCAAACAAACGA+TGG - chr2.1:31185379-31185398 MS.gene066321:intron 45.0%
TAAAGAGAGAGAGAGAGTGG+GGG - chr2.1:31184068-31184087 MS.gene066321:intron 45.0%
TACTGTTGCGTGGTATCAGA+TGG + chr2.1:31185674-31185693 None:intergenic 45.0%
TAGGCGACACCCTCATAATA+TGG - chr2.1:31186025-31186044 MS.gene066321:intron 45.0%
TCATATTCACGTCAGACACG+AGG - chr2.1:31183173-31183192 MS.gene066321:intron 45.0%
TCTTCTTACCACGGCATCTA+CGG + chr2.1:31184159-31184178 None:intergenic 45.0%
TGCTATCAGGTTTCGCTATC+GGG - chr2.1:31185292-31185311 MS.gene066321:intron 45.0%
TGGAATGCCTTAGGTAACTG+GGG - chr2.1:31184448-31184467 MS.gene066321:intron 45.0%
TGGAATGGAATAGAATGGGG+TGG + chr2.1:31182170-31182189 None:intergenic 45.0%
TGGAATGGAATGGAGTGTGA+TGG + chr2.1:31182106-31182125 None:intergenic 45.0%
TGGATACAGCTATTGGGATG+TGG - chr2.1:31185736-31185755 MS.gene066321:intron 45.0%
TGTAACACAATCCCGGTTGA+AGG - chr2.1:31184611-31184630 MS.gene066321:intron 45.0%
TTCAGCTCAGAGCGCATATA+TGG + chr2.1:31184690-31184709 None:intergenic 45.0%
TTCCAAATCCTCCTAAAGGG+TGG - chr2.1:31182946-31182965 MS.gene066321:intron 45.0%
TTTCTTGGCATGTGGAACCA+AGG - chr2.1:31186321-31186340 MS.gene066321:intron 45.0%
! AACCACCCTTTAGGAGGATT+TGG + chr2.1:31182951-31182970 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2.1:31184337-31184356 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2.1:31184338-31184357 None:intergenic 45.0%
! CAGAGATGAGGATGTTGCTT+TGG - chr2.1:31183999-31184018 MS.gene066321:intron 45.0%
! CATTGCTACTTACTCAGGCT+CGG - chr2.1:31185910-31185929 MS.gene066321:intron 45.0%
! CCACATGCCAAGAAAGTGTA+TGG + chr2.1:31186316-31186335 None:intergenic 45.0%
! CCCAACCACGATTTCTAAGA+TGG - chr2.1:31185235-31185254 MS.gene066321:intron 45.0%
! GGATACATGGTCTCAGCTTT+TGG - chr2.1:31185953-31185972 MS.gene066321:intron 45.0%
! GGATTGATAGAGTGGTGGAA+TGG + chr2.1:31182185-31182204 None:intergenic 45.0%
! GGGTCAAAAATCTCTGGCTT+TGG - chr2.1:31185716-31185735 MS.gene066321:intron 45.0%
! GTGGTACCTTTTTCTTAGGC+TGG - chr2.1:31186574-31186593 MS.gene066321:intron 45.0%
! GTTTTCTTGTCATGTGCAGG+TGG - chr2.1:31183379-31183398 MS.gene066321:intron 45.0%
!! ACATTGGTGCCAATTCTTGC+AGG - chr2.1:31185797-31185816 MS.gene066321:intron 45.0%
!! ACGAATTCTAAGACGGGGAT+TGG - chr2.1:31185477-31185496 MS.gene066321:intron 45.0%
!! AGGATGTTGCTTTGGATGAG+TGG - chr2.1:31184007-31184026 MS.gene066321:intron 45.0%
!! CGGTTTTGTGAGGTTGTGTT+AGG - chr2.1:31185212-31185231 MS.gene066321:intron 45.0%
!! CTGGCTTTGGATACAGCTAT+TGG - chr2.1:31185729-31185748 MS.gene066321:intron 45.0%
!! GAGTTAGGTTGATTAGGGGT+TGG + chr2.1:31183037-31183056 None:intergenic 45.0%
!! GGCCCAATGGATTATAGAGA+AGG + chr2.1:31185269-31185288 None:intergenic 45.0%
!! TTTTGGCTGGGCAAAAGAGA+AGG - chr2.1:31184880-31184899 MS.gene066321:intron 45.0%
AAGAAACGGGGAATGAGGAG+TGG - chr2.1:31181953-31181972 MS.gene066321:CDS 50.0%
AAGCCACACAAAGAAGGGGA+GGG + chr2.1:31184930-31184949 None:intergenic 50.0%
ACGAGAAACCACCCTTTAGG+AGG + chr2.1:31182957-31182976 None:intergenic 50.0%
AGTGGCCTCTGGTTGAACAT+TGG - chr2.1:31185781-31185800 MS.gene066321:intron 50.0%
ATCAGGTTTCGCTATCGGGT+CGG - chr2.1:31185296-31185315 MS.gene066321:intron 50.0%
CAGTTGCACCAATGAGTGTG+AGG + chr2.1:31183846-31183865 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2.1:31184336-31184355 MS.gene066321:intron 50.0%
CGATAGCGAAACCTGATAGC+AGG + chr2.1:31185293-31185312 None:intergenic 50.0%
CTCACACTCATTGGTGCAAC+TGG - chr2.1:31183844-31183863 MS.gene066321:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2.1:31184333-31184352 None:intergenic 50.0%
CTTCTTACCACGGCATCTAC+GGG + chr2.1:31184158-31184177 None:intergenic 50.0%
CTTTCATGGCACATGAAGGC+TGG - chr2.1:31184495-31184514 MS.gene066321:intron 50.0%
GAAATCCTCACCTCACAAGC+CGG - chr2.1:31185427-31185446 MS.gene066321:intron 50.0%
GGATGCAACCTCCCTTAATG+TGG - chr2.1:31186046-31186065 MS.gene066321:intron 50.0%
GTCCCACATCGGACAAAAGA+TGG - chr2.1:31185149-31185168 MS.gene066321:intron 50.0%
TAACCCTCCCCTTCTTTGTG+TGG - chr2.1:31184924-31184943 MS.gene066321:intron 50.0%
TAAGCCACACAAAGAAGGGG+AGG + chr2.1:31184931-31184950 None:intergenic 50.0%
TAGCGAAACCTGATAGCAGG+TGG + chr2.1:31185290-31185309 None:intergenic 50.0%
TCAGACACGAGGCTGATTAC+TGG - chr2.1:31183184-31183203 MS.gene066321:intron 50.0%
TGGCACCAATGTTCAACCAG+AGG + chr2.1:31185789-31185808 None:intergenic 50.0%
TGGTTAGAGTTCAGGGCCAT+TGG - chr2.1:31184428-31184447 MS.gene066321:intron 50.0%
! AGGCCATCTTTTGTCCGATG+TGG + chr2.1:31185155-31185174 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2.1:31184339-31184358 None:intergenic 50.0%
! GGCCATCTTTTGTCCGATGT+GGG + chr2.1:31185154-31185173 None:intergenic 50.0%
ACGACCAGCACTATTGGGCT+TGG + chr2.1:31185347-31185366 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2.1:31184325-31184344 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2.1:31184324-31184343 MS.gene066321:intron 55.0%
CAGGGCCATTGGAATGCCTT+AGG - chr2.1:31184439-31184458 MS.gene066321:intron 55.0%
CGAACCAAGCCCAATAGTGC+TGG - chr2.1:31185340-31185359 MS.gene066321:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2.1:31184331-31184350 MS.gene066321:intron 55.0%
TCAGGTTTCGCTATCGGGTC+GGG - chr2.1:31185297-31185316 MS.gene066321:intron 55.0%
TGGGGGAAAACCTCACAAGC+CGG - chr2.1:31185192-31185211 MS.gene066321:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2.1:31184325-31184344 MS.gene066321:intron 55.0%
!! AAGCCCAATAGTGCTGGTCG+TGG - chr2.1:31185346-31185365 MS.gene066321:intron 55.0%
!! AGCCCAATAGTGCTGGTCGT+GGG - chr2.1:31185347-31185366 MS.gene066321:intron 55.0%
!! CAAAACCGGCTTGTGAGGTG+AGG + chr2.1:31185435-31185454 None:intergenic 55.0%
!! CCTCACAAAACCGGCTTGTG+AGG + chr2.1:31185205-31185224 None:intergenic 55.0%
!! CCTCACAAGCCGGTTTTGTG+AGG - chr2.1:31185202-31185221 MS.gene066321:intron 55.0%
AAGGGAGAGGCCTGAGTGCA+AGG + chr2.1:31182886-31182905 None:intergenic 60.0%
ACTCAGGCCTCTCCCTTTGC+TGG - chr2.1:31182889-31182908 MS.gene066321:CDS 60.0%
CCATTGGGCCACCTGCTATC+AGG - chr2.1:31185279-31185298 MS.gene066321:intron 60.0%
CCCCCACGACCAGCACTATT+GGG + chr2.1:31185352-31185371 None:intergenic 60.0%
CCTGATAGCAGGTGGCCCAA+TGG + chr2.1:31185282-31185301 None:intergenic 60.0%
GAGAAGACCCGTAGATGCCG+TGG - chr2.1:31184148-31184167 MS.gene066321:intron 60.0%
TGCTGAGAAGCAGTGGCCTC+TGG - chr2.1:31185770-31185789 MS.gene066321:intron 60.0%
!! CCAATAGTGCTGGTCGTGGG+GGG - chr2.1:31185350-31185369 MS.gene066321:intron 60.0%
!! CCCAATAGTGCTGGTCGTGG+GGG - chr2.1:31185349-31185368 MS.gene066321:intron 60.0%
!! GCCCAATAGTGCTGGTCGTG+GGG - chr2.1:31185348-31185367 MS.gene066321:intron 60.0%
CCCCCCACGACCAGCACTAT+TGG + chr2.1:31185353-31185372 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 31181847 31186798 31181847 ID=MS.gene066321
chr2.1 mRNA 31181847 31186798 31181847 ID=MS.gene066321.t1;Parent=MS.gene066321
chr2.1 exon 31186705 31186798 31186705 ID=MS.gene066321.t1.exon1;Parent=MS.gene066321.t1
chr2.1 CDS 31186705 31186798 31186705 ID=cds.MS.gene066321.t1;Parent=MS.gene066321.t1
chr2.1 exon 31185224 31185247 31185224 ID=MS.gene066321.t1.exon2;Parent=MS.gene066321.t1
chr2.1 CDS 31185224 31185247 31185224 ID=cds.MS.gene066321.t1;Parent=MS.gene066321.t1
chr2.1 exon 31184074 31184156 31184074 ID=MS.gene066321.t1.exon3;Parent=MS.gene066321.t1
chr2.1 CDS 31184074 31184156 31184074 ID=cds.MS.gene066321.t1;Parent=MS.gene066321.t1
chr2.1 exon 31183928 31183992 31183928 ID=MS.gene066321.t1.exon4;Parent=MS.gene066321.t1
chr2.1 CDS 31183928 31183992 31183928 ID=cds.MS.gene066321.t1;Parent=MS.gene066321.t1
chr2.1 exon 31183744 31183793 31183744 ID=MS.gene066321.t1.exon5;Parent=MS.gene066321.t1
chr2.1 CDS 31183744 31183793 31183744 ID=cds.MS.gene066321.t1;Parent=MS.gene066321.t1
chr2.1 exon 31182827 31182928 31182827 ID=MS.gene066321.t1.exon6;Parent=MS.gene066321.t1
chr2.1 CDS 31182827 31182928 31182827 ID=cds.MS.gene066321.t1;Parent=MS.gene066321.t1
chr2.1 exon 31182659 31182718 31182659 ID=MS.gene066321.t1.exon7;Parent=MS.gene066321.t1
chr2.1 CDS 31182659 31182718 31182659 ID=cds.MS.gene066321.t1;Parent=MS.gene066321.t1
chr2.1 exon 31181847 31181981 31181847 ID=MS.gene066321.t1.exon8;Parent=MS.gene066321.t1
chr2.1 CDS 31181847 31181981 31181847 ID=cds.MS.gene066321.t1;Parent=MS.gene066321.t1
Gene Sequence

>MS.gene066321

AAACCTATGTGTTTTTCCATTTGCAACTGCTGTAGTCAATTTTCATGATACTGTAACAGGAAAGAAGAATAAAGAGATTTATAAACAAGAAACAGTGAATGGAAAGAAGAAACGGGGAATGAGGAGTGGCTAATGAAATAGAAAAAGTAGGGATAAAATGTAATTGGATTATTAATGTGTTCCATTCCATTGAATACACTCCAATTTGGGAGGAATGAAAACTTGGATGAATGAGTGGTATTGGATGGAATGAGTTCCATCACACTCCATTCCATTCCATTACTTTTTTACAAAACCAAACACTGGAATCTGACTCTATTCCACCCCATTCTATTCCATTCCACCACTCTATCAATCCAAACATAGCCATAGAGTTAACACTTAAGAGATGCTTGATGTGTCTTGAGAACTTGTTTTTTTGTCCTAAAAATGATTTCTTAATTTGTTCTTGAATAATTTCATACCCTAGAATTAGTTGAAACTAGGTGATCGAGTAGTCCAAAACTTAGCGCCCAATTTGAATAACAATGACATCAAAAGAATACGACTGGGATACAATGTGATTTGATAAAGGGTCTGCATTTTCCAAGAAAGTGGGTTTTAATGTCGTTTCTTTTTTGATGGGGAATGCTTTAATTGGAAAAACAAAACACAAATGAAATCTTATCTCTGAACCAAAGCTTAAAATATTAAAACACGGTATAAATGACGCAACTTCGAACATATTTCAATGAAATGAAGCTATTTATTAAAACTGCCATTAAATAAATTAGTAACATCGAAGTCAGAATAAAATAGATTAAAACTCAAGAAAACCCACTACAACATTCTAAAAAACAATAGGTACCTACCAGTTTATTTGAGCTTTTTAAGTGTCGGTCAATGTTAGGAACTCAAGAATTCTAATCTTCAAAATTAGAGGAATTTGTAAAATAAACTCATTGAATAAAGATAAAGATTGCAAACAACTGAAGAATTTCTTATGTGCAGTGAGATTGAAAGAGAAGATACAAATGATTTATAATGAAGAAGATAACCTTGCACTCAGGCCTCTCCCTTTGCTGGAACATTTTCTAGTTTAAAACTTTCATAAAATGAATTCCAAATCCTCCTAAAGGGTGGTTTCTCGTATTTATAAGCCATAGGATTAACATGAATTCAAACAGAAAGTCTAACCAACTTAACAACCAACCCCTAATCAACCTAACTCCAATCCTAACAAACTCCCCTTTATTCCAAGTCCTAACAGTCAACTTGTTTATTGTTCTATTTAGCATATCCTATTGTAACTGAATTTTTCATTATTTATCTTGTTTGTGAATAGCATCATATTCACGTCAGACACGAGGCTGATTACTGGCATCATGTTCATGCCTATTTGATCATTTCTGTTTCCTAGTCTCGTCAAATATTGTCATATAAGTTGTTTACATCTTATGTACTTCAGATTTTATTCTCTTATTTACATTTCCAATGTTTGAGTTTTGATTCTTTCAGAATGTCAAGACCATATTCATTCAAGTTTAATTGATGTTTTCTTGTCATGTGCAGGTGGATCCTCAAGACATAGTAATGGTATGAATATGTATTTTTGAGATCATTTCATTTTCAGATCATGGATGGTTTCATGGTTATTTACTGTTCCTCATTTAATATAGTCAAATGAATCAAACTTTAGAAAATGTTTGAACAATTATCATCCAAGTTACGAATATGTAATGACTAAAATTCAGTAGGTATTGTGAAACTATGAAAAAGATAGGAGGGGGTTTATAGCTGAGAAGTGAAAACATCACATGGTTATTCATGGCCAGAATTTCTTTTATTGTAAAATATAGGTGGCCAGTAAGTTACAGATGAAATGCAGAAATGTTTATGATGGTTTCACAATCCATCATTTTCTTCTAGGAAAAAGCTCCAAATATATATTAGCTCCAGTAGATATCAAAACATTGCACGATAAGATCCATTATTTGTAGCAATGGAGAATAATAATCCTCACACTCATTGGTGCAACTGGATGATTATTGGTCCCTATATTGTGAATGTGCAATATTTTGTAATTGGAGTGTTTGTAATTTTTATGCAATATTTGTAAATAGTACAGTGTGTTGGGTGGTTAAGAGTCAACATGAGAATCAAGTAAGTGTAGCAGAGATGAGGATGTTGCTTTGGATGAGTGGTAAGACTAGACATGATAGGATTAGGAATGACACCATTATAAAGAGAGAGAGAGAGTGGGGGTAGCACCTATAGTAGAAAAGTGGTAGAAAATAGGCTTAGATGGTTTGGGCATGTAGAGAGAAGACCCGTAGATGCCGTGGTAAGAAGAGTAGATCAAATGGAGGAGAGTCTAGTTAAAAGAGGTAGAGGAAGACCTAGGGAAACTATTGGAGAAACCATTAGAAAGGATTTAGAGGTCAATGAGTTGGATCCAAATTTGGTTTATGATAGAACACTATGGCGTAACTTGATCCATGTAGCCGACCCCACTTAGTGGGATAAGGCTTGGTTGTTGCTGTATTTGTAAATAGTGTTTGTACTTTTTGTTTAAAAAAATGATGCTACAAAGCTTCCATTATGGTTAGAGTTCAGGGCCATTGGAATGCCTTAGGTAACTGGGGATGTTTACATTTTTGCAGCTAGTTCTTTCATGGCACATGAAGGCTGGCACTATGTGTGAGTTTTCCAAAAAGGAGTTCATTGAAGGCTTACAATCTTTGGGGTATGAATTTTATAGTAACTTTGTAATAAAATTTGTTTCTGTAACACAATCCCGGTTGAAGGTCTTATAAAATTATTGCAGGATTGATTCTCTGGAGAAGTTCCGTGAAAAGATACCATATATGCGCTCTGAGCTGAAAGATGAACGTATGAACCCTAGGCATTCAGATCATGGCTTGAAATTAGTCGTAGTCTTGCAATTTTTATCATTCGTCATTAGAAATCATCTCCAATGATAAATTGAAGATCTGAAATTATATTTTCTGTTTTTGGCTGTCCAGAAAAATTTCGCGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGGTATGAACTGATATCTTTTTGTTAACCCTCCCCTTCTTTGTGTGGCTTAACTAATTTGCATGGAAGTAAGTGATGACCTGTTGGCTTATACTAATTTAAGCAATCTATTCGAACCGAATAAAATATACTAGTTCATGCATAAGACTCAATTGCCCCTTCCATTTTACTTGGTTATTATCATGATTGTTTCCCCCTATTCAATAGGTTTAGGACTAGAGACTCATATCTCTATACATAGTGTTAAAGAGTCCCACATCGGACAAAAGATGGCCTCAACATGTGTTTATAAGTGGGGGAAAACCTCACAAGCCGGTTTTGTGAGGTTGTGTTAGGCCCAACCACGATTTCTAAGATGGTATCACAGCCTTCTCTATAATCCATTGGGCCACCTGCTATCAGGTTTCGCTATCGGGTCGGGCCACCCACCATTTATGTTTACGAACCAAGCCCAATAGTGCTGGTCGTGGGGGGTAGAGAGTCCCACATCAAACAAACGATGGCCTGAACATGTGTTTATAAGTGGGGGAAATCCTCACCTCACAAGCCGGTTTTGTGAGGTTGTGTTAGGCCCAACTACGAATTCTAAGACGGGGATTGGTACGTAACCTTTTTAGTATCATCTGATTATTTATCAGCAAATAAATCATCAATCACAACTATATTTTAGTCTTCATTATTCTTTCTCTCATCTCTTTATCCATAATATAAACAGATTGTATTATATAAATTATTAGTTGATTTCAATGCTGTATTGATTCTTTCACTTTTACCATCTGATACCACGCAACAGTAATATACAAGTTAACTTTTTGCAGGGTCAAAAATCTCTGGCTTTGGATACAGCTATTGGGATGTGGCAATTATTATTTGCTGAGAAGCAGTGGCCTCTGGTTGAACATTGGTGCCAATTCTTGCAGGTAATAAGCCTAATTATATACCTTTTTAGTTTTCACTTTGCAAGTTAGAAGATTTTCTATTGGTATGATAATGCTTGTTTATTGAAAATTTCATTGCTACTTACTCAGGCTCGGCATAACAAAGCAATATCTAGGGATACATGGTCTCAGCTTTTGGAGTTTGCAAAGGTAAATTCACAATTTATCAACCTTTAGAATAAGTTCAATAGGCGACACCCTCATAATATGGATGCAACCTCCCTTAATGTGGATATTGTGCTGCATGAATTTAACTATGCTTGTTCACTGCTTGTATATTGTGTATGTCTTGACTAAATATCCAGAATCATAATAAGGAAAAGTAAATGTGGCTACATTTATCCTTCCATGTCGTTTCTCTCATGATTTTTGTGTTTGACCATCTTGCAAACAGTAGCTATTAATAGCATTCGAACAACTTTGTTTTTTAAACATTTTGAATCCTGATTACATTAGTGATCTTTGTTTACATATTGCCATACACTTTCTTGGCATGTGGAACCAAGGAACCAACAATACACTAGGACAAAGTGCAATTTATGAGAATAGTTTAGCTGATACAGAAGGATATTTATTCATTTATTACACTCTACAAAAAATCAAAATTATCACATTTTACACCAGTGGCTGTATTTATTGCCAGTCATGTCAGCTGTAAGTCTTCGTCGTCATGTCACTGTCTATTGACCGAGAAGAATTTGTATTCACTTTTACTGTGTATAAAGATGGCAATGCAAGTGGTACCTTTTTCTTAGGCTGGCATATTGATGATATTATGTTGTTACCTCTATGAAGTTACACTATATTTGTCATGTTCTTTTATGCAGACTGTTAGCTCAAATTTATCTGATTATGATGCTGAAGGTGCTTGGCCGTATCTTATTGATGAGTTTGTCGATTATCTGAACGAGAATGGTGTTAACCAACATGGTCAGATAACCGATTCTAGTCTAAAACGATGA

Protein sequence

>MS.gene066321.t1

KPMCFSICNCCSQFSUYCNRKEEURDLUTRNSGSSRHSNASSFMAHEGWHYVUVFQKGVHURLTIFGDUFSGEVPUKDTIYALUAERUTKISRDIULCFWLGKREGSKISGFGYSYWDVAIIICUEAVASGUTLVPILAGSAUQSNIUGYMVSAFGVCKDCULKFIULUCURCLAVSYUUVCRLSEREWCUPTWSDNRFUSKTM