Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062145.t1 | XP_013463593.1 | 99.4 | 468 | 3 | 0 | 1 | 468 | 21 | 488 | 2.30E-269 | 937.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062145.t1 | Q9C9P4 | 87.5 | 409 | 51 | 0 | 60 | 468 | 133 | 541 | 3.6e-215 | 748.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062145.t1 | A0A072V8C7 | 99.4 | 468 | 3 | 0 | 1 | 468 | 21 | 488 | 1.6e-269 | 937.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049173 | MS.gene062145 | 0.82507 | 5.73E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene062145 | 0.846553 | 2.02E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene062145 | 0.849268 | 3.61E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene062145 | 0.842701 | 2.20E-58 | -1.69E-46 |
| MS.gene049369 | MS.gene062145 | 0.864305 | 1.34E-64 | -1.69E-46 |
| MS.gene049427 | MS.gene062145 | 0.852841 | 3.54E-61 | -1.69E-46 |
| MS.gene049491 | MS.gene062145 | 0.814307 | 1.65E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene062145 | 0.801325 | 9.50E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene062145 | 0.805782 | 1.13E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene062145 | 0.824805 | 6.61E-54 | -1.69E-46 |
| MS.gene049828 | MS.gene062145 | 0.812552 | 4.00E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene062145 | 0.816146 | 6.43E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene062145 | 0.818476 | 1.92E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene062145 | 0.828477 | 8.80E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene062145 | 0.816107 | 6.56E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene062145 | 0.802312 | 5.96E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene062145 | 0.806017 | 1.01E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene062145 | 0.802929 | 4.44E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene062145 | 0.81311 | 3.02E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene062145 | 0.811987 | 5.32E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene062145 | 0.816088 | 6.62E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene062145 | 0.826128 | 3.21E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene062145 | 0.815064 | 1.12E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene062145 | 0.804399 | 2.20E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene062145 | 0.814124 | 1.81E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene062145 | 0.848459 | 6.05E-60 | -1.69E-46 |
| MS.gene051617 | MS.gene062145 | 0.81253 | 4.05E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene062145 | 0.849028 | 4.21E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene062145 | 0.83708 | 6.42E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene062145 | 0.813054 | 3.11E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene062145 | 0.833899 | 4.09E-56 | -1.69E-46 |
| MS.gene051874 | MS.gene062145 | 0.806174 | 9.35E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene062145 | 0.806738 | 7.11E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene062145 | 0.826634 | 2.44E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene062145 | 0.827455 | 1.55E-54 | -1.69E-46 |
| MS.gene052290 | MS.gene062145 | 0.813387 | 2.63E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene062145 | 0.847477 | 1.13E-59 | -1.69E-46 |
| MS.gene052481 | MS.gene062145 | 0.812199 | 4.78E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene062145 | 0.858472 | 8.05E-63 | -1.69E-46 |
| MS.gene052485 | MS.gene062145 | 0.830861 | 2.31E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene062145 | 0.804293 | 2.32E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene062145 | 0.841679 | 4.11E-58 | -1.69E-46 |
| MS.gene053103 | MS.gene062145 | 0.826084 | 3.29E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene062145 | 0.835109 | 2.03E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene062145 | 0.825624 | 4.23E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene062145 | 0.803856 | 2.85E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene062145 | 0.804463 | 2.13E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene062145 | 0.827996 | 1.15E-54 | -1.69E-46 |
| MS.gene053384 | MS.gene062145 | 0.813831 | 2.10E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene062145 | 0.831667 | 1.47E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene062145 | 0.816234 | 6.14E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene062145 | 0.835184 | 1.95E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene062145 | 0.802894 | 4.52E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene062145 | 0.847869 | 8.80E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene062145 | 0.82822 | 1.01E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene062145 | 0.82626 | 2.99E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene062145 | 0.829624 | 4.64E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene062145 | 0.818022 | 2.43E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene062145 | 0.810633 | 1.05E-50 | -1.69E-46 |
| MS.gene055212 | MS.gene062145 | 0.80211 | 6.56E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene062145 | 0.801824 | 7.50E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene062145 | 0.832601 | 8.62E-56 | -1.69E-46 |
| MS.gene055412 | MS.gene062145 | 0.813952 | 1.97E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene062145 | 0.830821 | 2.37E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene062145 | 0.806041 | 9.97E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene062145 | 0.803032 | 4.23E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene062145 | 0.819986 | 8.71E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene062145 | 0.827048 | 1.94E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene062145 | 0.804836 | 1.78E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene062145 | 0.8428 | 2.07E-58 | -1.69E-46 |
| MS.gene055802 | MS.gene062145 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene062145 | 0.831963 | 1.24E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene062145 | 0.831583 | 1.54E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene062145 | 0.807615 | 4.63E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene062145 | 0.832099 | 1.15E-55 | -1.69E-46 |
| MS.gene056422 | MS.gene062145 | 0.817637 | 2.97E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene062145 | 0.802193 | 6.30E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene062145 | 0.818105 | 2.33E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene062145 | 0.832111 | 1.14E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene062145 | 0.842466 | 2.54E-58 | -1.69E-46 |
| MS.gene056611 | MS.gene062145 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene05664 | MS.gene062145 | 0.802048 | 6.75E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene062145 | 0.810201 | 1.30E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene062145 | 0.844467 | 7.42E-59 | -1.69E-46 |
| MS.gene056903 | MS.gene062145 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene062145 | 0.82005 | 8.42E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene062145 | 0.860371 | 2.16E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene062145 | 0.840718 | 7.34E-58 | -1.69E-46 |
| MS.gene057285 | MS.gene062145 | 0.809944 | 1.47E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene062145 | 0.810226 | 1.28E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene062145 | 0.835777 | 1.38E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene062145 | 0.811582 | 6.51E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene062145 | 0.812464 | 4.18E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene062145 | 0.80645 | 8.18E-50 | -1.69E-46 |
| MS.gene057537 | MS.gene062145 | 0.826442 | 2.71E-54 | -1.69E-46 |
| MS.gene057734 | MS.gene062145 | 0.844955 | 5.49E-59 | -1.69E-46 |
| MS.gene057926 | MS.gene062145 | 0.841519 | 4.52E-58 | -1.69E-46 |
| MS.gene058082 | MS.gene062145 | 0.826844 | 2.17E-54 | -1.69E-46 |
| MS.gene058120 | MS.gene062145 | 0.806381 | 8.46E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene062145 | 0.802167 | 6.38E-49 | -1.69E-46 |
| MS.gene058459 | MS.gene062145 | 0.813529 | 2.44E-51 | -1.69E-46 |
| MS.gene058588 | MS.gene062145 | 0.817029 | 4.08E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene062145 | 0.819204 | 1.31E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene062145 | 0.816924 | 4.30E-52 | -1.69E-46 |
| MS.gene058748 | MS.gene062145 | 0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene062145 | 0.828593 | 8.25E-55 | -1.69E-46 |
| MS.gene058840 | MS.gene062145 | -0.802652 | 5.07E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene062145 | 0.817339 | 3.47E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene062145 | 0.829234 | 5.77E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene062145 | 0.820824 | 5.59E-53 | -1.69E-46 |
| MS.gene059305 | MS.gene062145 | 0.810506 | 1.11E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene062145 | 0.815833 | 7.55E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene062145 | 0.807809 | 4.22E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene062145 | 0.840534 | 8.21E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene062145 | 0.821207 | 4.56E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene062145 | 0.816045 | 6.77E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene062145 | 0.815341 | 9.71E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene062145 | 0.809402 | 1.93E-50 | -1.69E-46 |
| MS.gene059708 | MS.gene062145 | 0.811942 | 5.44E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene062145 | 0.826901 | 2.10E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene062145 | 0.813343 | 2.69E-51 | -1.69E-46 |
| MS.gene05986 | MS.gene062145 | 0.861364 | 1.08E-63 | -1.69E-46 |
| MS.gene059902 | MS.gene062145 | 0.826772 | 2.26E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene062145 | 0.832104 | 1.14E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene062145 | 0.824675 | 7.10E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene062145 | 0.83468 | 2.61E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene062145 | 0.892407 | 1.63E-74 | -1.69E-46 |
| MS.gene060837 | MS.gene062145 | 0.833695 | 4.60E-56 | -1.69E-46 |
| MS.gene060981 | MS.gene062145 | 0.822564 | 2.21E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene062145 | 0.852702 | 3.88E-61 | -1.69E-46 |
| MS.gene061051 | MS.gene062145 | -0.805225 | 1.48E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene062145 | 0.809178 | 2.15E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene062145 | 0.866754 | 2.26E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 119 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGTTTACCTCAGGATTT+TGG | 0.178284 | 2.3:+46497046 | None:intergenic |
| ACCATTTGCAACAACAAATA+TGG | 0.187806 | 2.3:-46501536 | MS.gene062145:CDS |
| CAGCTTCACCTTTAATTATA+TGG | 0.206063 | 2.3:+46501295 | None:intergenic |
| CTCTGTTTCCAGAGGATTGC+TGG | 0.218073 | 2.3:-46503244 | MS.gene062145:intron |
| GTTGCAAATGGTACACAAAA+AGG | 0.243023 | 2.3:+46501547 | None:intergenic |
| GCTGCAAACCATATAATTAA+AGG | 0.245748 | 2.3:-46501303 | MS.gene062145:CDS |
| GAAAAGGCATTAGCTAATTC+TGG | 0.245771 | 2.3:-46497165 | MS.gene062145:CDS |
| GATTGGGAGAAGAGAGATTA+AGG | 0.255347 | 2.3:+46505278 | None:intergenic |
| TTGTCTAATTCATTTGGTTT+TGG | 0.284201 | 2.3:-46495807 | MS.gene062145:CDS |
| ACCGAGGAACTCTGCATATA+TGG | 0.296883 | 2.3:+46500131 | None:intergenic |
| GAAAGAGAGACTAGACATTA+AGG | 0.338183 | 2.3:-46495835 | MS.gene062145:CDS |
| GCTGTGGATATTGAATAGTT+TGG | 0.338257 | 2.3:+46501357 | None:intergenic |
| AAAATCTGTTTCACTTAAAA+GGG | 0.341894 | 2.3:+46495757 | None:intergenic |
| TAAAGTAATGGCTGTAGCTT+TGG | 0.350403 | 2.3:-46503517 | MS.gene062145:CDS |
| CCCATATTTGTTGTTGCAAA+TGG | 0.365943 | 2.3:+46501535 | None:intergenic |
| TACCTGCATTCCACCCATTC+CGG | 0.366985 | 2.3:+46503048 | None:intergenic |
| CAGGCTTTGATTCATTGCTT+TGG | 0.368321 | 2.3:-46497069 | MS.gene062145:CDS |
| AGTGGGATAAGCGAGATTAA+TGG | 0.369472 | 2.3:-46503360 | MS.gene062145:CDS |
| GCAGGCTTGTCTAATTCATT+TGG | 0.370179 | 2.3:-46495813 | MS.gene062145:CDS |
| TGGGTGGCTTTGTAGCATGC+AGG | 0.380536 | 2.3:-46501006 | MS.gene062145:CDS |
| CTGTGGATATTGAATAGTTT+GGG | 0.381332 | 2.3:+46501358 | None:intergenic |
| TTTGTAATGGGTGAAGGGGC+TGG | 0.383948 | 2.3:-46500494 | MS.gene062145:CDS |
| ACTACTCGTCTTTGCTCTAT+AGG | 0.387655 | 2.3:+46503459 | None:intergenic |
| CACACCTGCTGGAGATCTTA+AGG | 0.393542 | 2.3:-46497097 | MS.gene062145:CDS |
| TGCCATGCTTGCAATGGATC+TGG | 0.395136 | 2.3:-46501509 | MS.gene062145:intron |
| TCCATCCTCTTTGAAAACTT+TGG | 0.397379 | 2.3:+46503184 | None:intergenic |
| TACTAAAGCTTCACGCCCTT+GGG | 0.399669 | 2.3:-46500957 | MS.gene062145:CDS |
| TTGAAAATTGTAGGGGTGGA+TGG | 0.404082 | 2.3:-46501382 | MS.gene062145:intron |
| CCCAATCGAATGTCCCGTTC+TGG | 0.406670 | 2.3:-46505262 | MS.gene062145:intron |
| CCATTTGCAACAACAAATAT+GGG | 0.422822 | 2.3:-46501535 | MS.gene062145:CDS |
| TTCTACAATAATCTACTTGA+TGG | 0.427157 | 2.3:-46503387 | MS.gene062145:CDS |
| TATCATACCACTGCTTCATC+CGG | 0.430956 | 2.3:+46496704 | None:intergenic |
| TCTGTTTCCAGAGGATTGCT+GGG | 0.438070 | 2.3:-46503243 | MS.gene062145:intron |
| AAGCTTTACGAATCTCATAT+AGG | 0.438138 | 2.3:-46501579 | MS.gene062145:CDS |
| ATCGTTCTCGTCGTCGCAGC+AGG | 0.440595 | 2.3:-46505309 | MS.gene062145:CDS |
| AGATTATTGTAGAAGACATC+TGG | 0.441095 | 2.3:+46503396 | None:intergenic |
| TGTTATTCTTTGCATTGAAA+AGG | 0.442258 | 2.3:-46497181 | MS.gene062145:CDS |
| AAGTGTGAAATTACCAGAAC+GGG | 0.446164 | 2.3:+46505249 | None:intergenic |
| CGAGTAGTTGTGACGGGTAT+GGG | 0.449622 | 2.3:-46503444 | MS.gene062145:CDS |
| AATCTTGGTGTAGGCTTGGG+TGG | 0.449843 | 2.3:-46501022 | MS.gene062145:intron |
| ACGAGTAGTTGTGACGGGTA+TGG | 0.463031 | 2.3:-46503445 | MS.gene062145:CDS |
| AATCTACTTGATGGTGTTAG+TGG | 0.463552 | 2.3:-46503378 | MS.gene062145:CDS |
| CTACTAAAGCTTCACGCCCT+TGG | 0.463863 | 2.3:-46500958 | MS.gene062145:CDS |
| ATCATTATTTCTTTGTGAGA+GGG | 0.464240 | 2.3:+46500982 | None:intergenic |
| TGAAAATTGTAGGGGTGGAT+GGG | 0.466104 | 2.3:-46501381 | MS.gene062145:intron |
| TTGCAGGACGTGATGCTTTG+TGG | 0.471500 | 2.3:-46501145 | MS.gene062145:intron |
| GGGTGGCTTTGTAGCATGCA+GGG | 0.471985 | 2.3:-46501005 | MS.gene062145:CDS |
| GGAAGCCGTTGCAACTATAC+AGG | 0.479199 | 2.3:-46496873 | MS.gene062145:intron |
| ACCAGAACGGGACATTCGAT+TGG | 0.480965 | 2.3:+46505261 | None:intergenic |
| ATGTTGTATCTGCTGACAGC+TGG | 0.481211 | 2.3:-46503154 | MS.gene062145:CDS |
| ACGATGAGATTGAGAAGAGT+GGG | 0.485286 | 2.3:+46505327 | None:intergenic |
| ATCAAATCTTTCTCAACTGA+TGG | 0.487001 | 2.3:-46503217 | MS.gene062145:CDS |
| CTCCGGAATGGGTGGAATGC+AGG | 0.488440 | 2.3:-46503050 | MS.gene062145:intron |
| CAAGGGCGTGAAGCTTTAGT+AGG | 0.491204 | 2.3:+46500959 | None:intergenic |
| CATGCCACATCCACACCTGC+TGG | 0.494143 | 2.3:-46497108 | MS.gene062145:CDS |
| GATGCTGCTATAATACCAAT+TGG | 0.497951 | 2.3:-46501115 | MS.gene062145:intron |
| AACCGTGATGGATTTGTAAT+GGG | 0.498732 | 2.3:-46500506 | MS.gene062145:CDS |
| TGAGATTCGTAAAGCTTCAA+TGG | 0.501049 | 2.3:+46501585 | None:intergenic |
| AGCTAATTCTGGAATTTCAA+AGG | 0.506190 | 2.3:-46497154 | MS.gene062145:CDS |
| CAGGACACCAATGTGCTTGT+GGG | 0.506351 | 2.3:-46495864 | MS.gene062145:CDS |
| GACCAGATCCATTGCAAGCA+TGG | 0.507024 | 2.3:+46501507 | None:intergenic |
| TTCATGTAGGCAATAAAGAC+AGG | 0.508573 | 2.3:-46496758 | MS.gene062145:intron |
| ATCTCCAGCAGGTGTGGATG+TGG | 0.511310 | 2.3:+46497104 | None:intergenic |
| TCTATGATTGGTCATCTACT+AGG | 0.512790 | 2.3:-46496911 | MS.gene062145:CDS |
| CCAGAACGGGACATTCGATT+GGG | 0.522885 | 2.3:+46505262 | None:intergenic |
| ATGGGTGTGGTCACACCACT+TGG | 0.525435 | 2.3:-46503426 | MS.gene062145:CDS |
| CTTTGATCCCACAAGCACAT+TGG | 0.525820 | 2.3:+46495857 | None:intergenic |
| CCAGGACACCAATGTGCTTG+TGG | 0.525865 | 2.3:-46495865 | MS.gene062145:intron |
| GATCATTATTTCTTTGTGAG+AGG | 0.527650 | 2.3:+46500981 | None:intergenic |
| AGAAGAGTTAGAGCATGCTA+AGG | 0.527971 | 2.3:-46500459 | MS.gene062145:intron |
| ATCATACCACTGCTTCATCC+GGG | 0.529315 | 2.3:+46496705 | None:intergenic |
| AATTCGACGAAGTCTATGAT+TGG | 0.531883 | 2.3:-46496923 | MS.gene062145:CDS |
| GGTCATCTACTAGGAGCAGC+TGG | 0.536898 | 2.3:-46496902 | MS.gene062145:CDS |
| GAACCGTGATGGATTTGTAA+TGG | 0.538884 | 2.3:-46500507 | MS.gene062145:CDS |
| AAAATTTCAAGGTAAAGTAA+TGG | 0.539854 | 2.3:-46503529 | MS.gene062145:intron |
| TGGAGATCTTAAGGAGTACC+AGG | 0.543599 | 2.3:-46497088 | MS.gene062145:CDS |
| CTTAAGATCTCCAGCAGGTG+TGG | 0.546013 | 2.3:+46497098 | None:intergenic |
| GATGGATTTGTAATGGGTGA+AGG | 0.551362 | 2.3:-46500500 | MS.gene062145:CDS |
| ACTCGTCTTTGCTCTATAGG+AGG | 0.556147 | 2.3:+46503462 | None:intergenic |
| ACCATATATGCAGAGTTCCT+CGG | 0.556868 | 2.3:-46500132 | MS.gene062145:CDS |
| AACGATGAGATTGAGAAGAG+TGG | 0.557745 | 2.3:+46505326 | None:intergenic |
| ATGGATTTGTAATGGGTGAA+GGG | 0.560592 | 2.3:-46500499 | MS.gene062145:CDS |
| CATAATATTACAATATCCCA+AGG | 0.565400 | 2.3:+46500941 | None:intergenic |
| AGTTGTGACGGGTATGGGTG+TGG | 0.566633 | 2.3:-46503439 | MS.gene062145:CDS |
| TGGAATTACTGAAGAAGTAA+TGG | 0.572336 | 2.3:-46503110 | MS.gene062145:CDS |
| CTGTTTCCAGAGGATTGCTG+GGG | 0.573853 | 2.3:-46503242 | MS.gene062145:intron |
| CAAAGCAATGAATCAAAGCC+TGG | 0.573865 | 2.3:+46497070 | None:intergenic |
| ATCTACTTGATGGTGTTAGT+GGG | 0.577119 | 2.3:-46503377 | MS.gene062145:CDS |
| TGGATTTGTAATGGGTGAAG+GGG | 0.577451 | 2.3:-46500498 | MS.gene062145:CDS |
| CAAAGACGAGTAGTTGTGAC+GGG | 0.584893 | 2.3:-46503450 | MS.gene062145:CDS |
| GGGTTCTGCCATGCTTGCAA+TGG | 0.587872 | 2.3:-46501515 | MS.gene062145:CDS |
| TAATATCAATCTAGAAAACC+CGG | 0.589028 | 2.3:-46496723 | MS.gene062145:CDS |
| GAGAGACTAGACATTAAGGC+AGG | 0.592509 | 2.3:-46495831 | MS.gene062145:CDS |
| GAGTTAGATAAAACAAAATG+TGG | 0.592751 | 2.3:-46503085 | MS.gene062145:CDS |
| AAATCTGTTTCACTTAAAAG+GGG | 0.593441 | 2.3:+46495758 | None:intergenic |
| ACTAGGAGCAGCTGGTGGTG+TGG | 0.593602 | 2.3:-46496894 | MS.gene062145:CDS |
| TACTCCTTAAGATCTCCAGC+AGG | 0.608811 | 2.3:+46497093 | None:intergenic |
| TGGGAGAAGAGAGATTAAGG+TGG | 0.610292 | 2.3:+46505281 | None:intergenic |
| TGTCACCTGTATAGTTGCAA+CGG | 0.612124 | 2.3:+46496868 | None:intergenic |
| CAGGACGTGATGCTTTGTGG+TGG | 0.615515 | 2.3:-46501142 | MS.gene062145:CDS |
| GAAGTGTGAAATTACCAGAA+CGG | 0.615575 | 2.3:+46505248 | None:intergenic |
| TGATTGTGCACAATATCCAA+CGG | 0.615962 | 2.3:-46503334 | MS.gene062145:intron |
| TTGATTGGCTCCGGAATGGG+TGG | 0.619435 | 2.3:-46503058 | MS.gene062145:CDS |
| TTGCTTTGGCCAAAATCCTG+AGG | 0.628055 | 2.3:-46497055 | MS.gene062145:intron |
| AGAAAACCCGGATGAAGCAG+TGG | 0.634880 | 2.3:-46496711 | MS.gene062145:intron |
| ATTACTTGTAGCACACGCTG+TGG | 0.636535 | 2.3:+46501341 | None:intergenic |
| AGTAATTCCAGCATTGACCA+AGG | 0.637726 | 2.3:+46503123 | None:intergenic |
| GCAAAGACGAGTAGTTGTGA+CGG | 0.640661 | 2.3:-46503451 | MS.gene062145:CDS |
| GTGACTGAACCACGTCCTGA+TGG | 0.644994 | 2.3:-46500081 | MS.gene062145:intron |
| CATCTACTAGGAGCAGCTGG+TGG | 0.649400 | 2.3:-46496899 | MS.gene062145:CDS |
| CACCCATTACAAATCCATCA+CGG | 0.660498 | 2.3:+46500504 | None:intergenic |
| GTAGGCAATAAAGACAGGGT+GGG | 0.660808 | 2.3:-46496753 | MS.gene062145:intron |
| TGTAGGCAATAAAGACAGGG+TGG | 0.666418 | 2.3:-46496754 | MS.gene062145:intron |
| TAATTCTGGAATTTCAAAGG+AGG | 0.680514 | 2.3:-46497151 | MS.gene062145:CDS |
| ACATCTGGATCATGACCAAG+TGG | 0.691170 | 2.3:+46503411 | None:intergenic |
| ATAATATTACAATATCCCAA+GGG | 0.702702 | 2.3:+46500942 | None:intergenic |
| TCATGTAGGCAATAAAGACA+GGG | 0.721427 | 2.3:-46496757 | MS.gene062145:intron |
| ATATATGCAGAGTTCCTCGG+TGG | 0.726227 | 2.3:-46500129 | MS.gene062145:CDS |
| CACATGTGAAGCTTCCACCG+AGG | 0.767036 | 2.3:+46500115 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 46495767 | 46505361 | 46495767 | ID=MS.gene062145 |
| chr2.3 | mRNA | 46495767 | 46505361 | 46495767 | ID=MS.gene062145.t1;Parent=MS.gene062145 |
| chr2.3 | exon | 46505263 | 46505361 | 46505263 | ID=MS.gene062145.t1.exon1;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46505263 | 46505361 | 46505263 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46503335 | 46503540 | 46503335 | ID=MS.gene062145.t1.exon2;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46503335 | 46503540 | 46503335 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46503051 | 46503254 | 46503051 | ID=MS.gene062145.t1.exon3;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46503051 | 46503254 | 46503051 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46501510 | 46501620 | 46501510 | ID=MS.gene062145.t1.exon4;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46501510 | 46501620 | 46501510 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46501296 | 46501391 | 46501296 | ID=MS.gene062145.t1.exon5;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46501296 | 46501391 | 46501296 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46501116 | 46501161 | 46501116 | ID=MS.gene062145.t1.exon6;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46501116 | 46501161 | 46501116 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46500952 | 46501031 | 46500952 | ID=MS.gene062145.t1.exon7;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46500952 | 46501031 | 46500952 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46500460 | 46500528 | 46500460 | ID=MS.gene062145.t1.exon8;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46500460 | 46500528 | 46500460 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46500082 | 46500166 | 46500082 | ID=MS.gene062145.t1.exon9;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46500082 | 46500166 | 46500082 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46497056 | 46497210 | 46497056 | ID=MS.gene062145.t1.exon10;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46497056 | 46497210 | 46497056 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46496874 | 46496954 | 46496874 | ID=MS.gene062145.t1.exon11;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46496874 | 46496954 | 46496874 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46496712 | 46496771 | 46496712 | ID=MS.gene062145.t1.exon12;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46496712 | 46496771 | 46496712 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| chr2.3 | exon | 46495767 | 46495883 | 46495767 | ID=MS.gene062145.t1.exon13;Parent=MS.gene062145.t1 |
| chr2.3 | CDS | 46495767 | 46495883 | 46495767 | ID=cds.MS.gene062145.t1;Parent=MS.gene062145.t1 |
| Gene Sequence |
| Protein sequence |
