Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069715.t1 | XP_003591063.1 | 84.7 | 222 | 27 | 5 | 1 | 219 | 1 | 218 | 2.90E-89 | 338.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069715.t1 | G7I7H8 | 84.7 | 222 | 27 | 5 | 1 | 219 | 1 | 218 | 2.1e-89 | 338.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene069715 | 0.812051 | 5.15E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene069715 | 0.910732 | 1.35E-82 | -1.69E-46 |
| MS.gene049491 | MS.gene069715 | 0.829483 | 5.02E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene069715 | 0.818246 | 2.17E-52 | -1.69E-46 |
| MS.gene049615 | MS.gene069715 | 0.814648 | 1.38E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene069715 | 0.824786 | 6.68E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene069715 | 0.823199 | 1.58E-53 | -1.69E-46 |
| MS.gene049760 | MS.gene069715 | 0.805562 | 1.26E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene069715 | 0.809825 | 1.56E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene069715 | 0.84852 | 5.82E-60 | -1.69E-46 |
| MS.gene050163 | MS.gene069715 | 0.808556 | 2.92E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene069715 | 0.848323 | 6.59E-60 | -1.69E-46 |
| MS.gene050397 | MS.gene069715 | 0.822651 | 2.11E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene069715 | 0.86431 | 1.33E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene069715 | 0.827404 | 1.59E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene069715 | 0.809423 | 1.91E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene069715 | 0.845152 | 4.85E-59 | -1.69E-46 |
| MS.gene050670 | MS.gene069715 | 0.815452 | 9.18E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene069715 | 0.815927 | 7.19E-52 | -1.69E-46 |
| MS.gene050767 | MS.gene069715 | 0.857429 | 1.64E-62 | -1.69E-46 |
| MS.gene050770 | MS.gene069715 | 0.862057 | 6.63E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene069715 | 0.830394 | 3.01E-55 | -1.69E-46 |
| MS.gene050781 | MS.gene069715 | 0.811758 | 5.97E-51 | -1.69E-46 |
| MS.gene050783 | MS.gene069715 | 0.863549 | 2.30E-64 | -1.69E-46 |
| MS.gene050812 | MS.gene069715 | 0.837828 | 4.13E-57 | -1.69E-46 |
| MS.gene050950 | MS.gene069715 | 0.816379 | 5.70E-52 | -1.69E-46 |
| MS.gene05100 | MS.gene069715 | 0.813336 | 2.70E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene069715 | 0.862788 | 3.96E-64 | -1.69E-46 |
| MS.gene05105 | MS.gene069715 | 0.827902 | 1.21E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene069715 | 0.811658 | 6.27E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene069715 | 0.852025 | 6.05E-61 | -1.69E-46 |
| MS.gene051471 | MS.gene069715 | 0.81988 | 9.21E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene069715 | 0.832979 | 6.94E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene069715 | 0.86632 | 3.11E-65 | -1.69E-46 |
| MS.gene051694 | MS.gene069715 | 0.802613 | 5.16E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene069715 | 0.803408 | 3.54E-49 | -1.69E-46 |
| MS.gene051877 | MS.gene069715 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene069715 | 0.829864 | 4.05E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene069715 | 0.822732 | 2.02E-53 | -1.69E-46 |
| MS.gene052290 | MS.gene069715 | 0.805844 | 1.10E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene069715 | 0.868087 | 8.47E-66 | -1.69E-46 |
| MS.gene052322 | MS.gene069715 | 0.831024 | 2.11E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene069715 | 0.848969 | 4.37E-60 | -1.69E-46 |
| MS.gene052340 | MS.gene069715 | 0.802275 | 6.06E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene069715 | 0.819689 | 1.02E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene069715 | 0.805737 | 1.16E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene069715 | 0.838617 | 2.58E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene069715 | 0.834072 | 3.70E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene069715 | 0.820931 | 5.28E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene069715 | 0.801273 | 9.73E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene069715 | 0.849236 | 3.68E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene069715 | 0.864346 | 1.30E-64 | -1.69E-46 |
| MS.gene053107 | MS.gene069715 | 0.883462 | 4.40E-71 | -1.69E-46 |
| MS.gene053207 | MS.gene069715 | 0.812648 | 3.82E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene069715 | 0.808088 | 3.68E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene069715 | 0.839881 | 1.21E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene069715 | 0.831382 | 1.72E-55 | -1.69E-46 |
| MS.gene053322 | MS.gene069715 | 0.881377 | 2.53E-70 | -1.69E-46 |
| MS.gene053557 | MS.gene069715 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene069715 | 0.818843 | 1.59E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene069715 | 0.872551 | 2.92E-67 | -1.69E-46 |
| MS.gene05455 | MS.gene069715 | 0.825738 | 3.98E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene069715 | 0.821451 | 4.01E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene069715 | 0.861588 | 9.23E-64 | -1.69E-46 |
| MS.gene054803 | MS.gene069715 | 0.860353 | 2.19E-63 | -1.69E-46 |
| MS.gene054804 | MS.gene069715 | 0.863443 | 2.48E-64 | -1.69E-46 |
| MS.gene05505 | MS.gene069715 | 0.802967 | 4.36E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene069715 | 0.839458 | 1.57E-57 | -1.69E-46 |
| MS.gene055206 | MS.gene069715 | 0.811284 | 7.56E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene069715 | 0.835824 | 1.34E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene069715 | 0.811335 | 7.37E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene069715 | 0.815705 | 8.06E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene069715 | 0.851723 | 7.37E-61 | -1.69E-46 |
| MS.gene055412 | MS.gene069715 | 0.821621 | 3.66E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene069715 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene069715 | 0.828257 | 9.94E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene069715 | 0.858785 | 6.49E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene069715 | 0.84497 | 5.43E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene069715 | 0.816997 | 4.14E-52 | -1.69E-46 |
| MS.gene055896 | MS.gene069715 | 0.843543 | 1.31E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene069715 | 0.829248 | 5.72E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene069715 | 0.818148 | 2.28E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene069715 | 0.818664 | 1.74E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene069715 | 0.857929 | 1.17E-62 | -1.69E-46 |
| MS.gene056410 | MS.gene069715 | 0.828235 | 1.01E-54 | -1.69E-46 |
| MS.gene056452 | MS.gene069715 | 0.812912 | 3.34E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene069715 | 0.800085 | 1.70E-48 | -1.69E-46 |
| MS.gene056609 | MS.gene069715 | 0.809271 | 2.06E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene069715 | 0.832617 | 8.53E-56 | -1.69E-46 |
| MS.gene056897 | MS.gene069715 | 0.82622 | 3.06E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene069715 | 0.892015 | 2.34E-74 | -1.69E-46 |
| MS.gene05702 | MS.gene069715 | 0.84041 | 8.84E-58 | -1.69E-46 |
| MS.gene057123 | MS.gene069715 | 0.833991 | 3.88E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene069715 | 0.864967 | 8.31E-65 | -1.69E-46 |
| MS.gene057146 | MS.gene069715 | 0.856119 | 3.99E-62 | -1.69E-46 |
| MS.gene057295 | MS.gene069715 | 0.827026 | 1.96E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene069715 | 0.846385 | 2.25E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene069715 | 0.8604 | 2.12E-63 | -1.69E-46 |
| MS.gene058002 | MS.gene069715 | 0.809393 | 1.93E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene069715 | 0.867146 | 1.70E-65 | -1.69E-46 |
| MS.gene058082 | MS.gene069715 | 0.809083 | 2.25E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene069715 | 0.838138 | 3.44E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene069715 | 0.867089 | 1.77E-65 | -1.69E-46 |
| MS.gene058323 | MS.gene069715 | 0.822921 | 1.83E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene069715 | 0.808606 | 2.85E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene069715 | 0.807797 | 4.24E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene069715 | 0.883483 | 4.32E-71 | -1.69E-46 |
| MS.gene058787 | MS.gene069715 | 0.805457 | 1.32E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene069715 | 0.822564 | 2.21E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene069715 | 0.840756 | 7.18E-58 | -1.69E-46 |
| MS.gene059326 | MS.gene069715 | 0.814033 | 1.89E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene069715 | 0.836669 | 8.17E-57 | -1.69E-46 |
| MS.gene059536 | MS.gene069715 | 0.885573 | 7.24E-72 | -1.69E-46 |
| MS.gene059597 | MS.gene069715 | 0.841499 | 4.58E-58 | -1.69E-46 |
| MS.gene05959 | MS.gene069715 | 0.815579 | 8.60E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene069715 | 0.848005 | 8.07E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene069715 | 0.852169 | 5.51E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene069715 | 0.852088 | 5.81E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene069715 | 0.853591 | 2.16E-61 | -1.69E-46 |
| MS.gene059708 | MS.gene069715 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene069715 | 0.802925 | 4.45E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene069715 | 0.805658 | 1.20E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene069715 | 0.910267 | 2.27E-82 | -1.69E-46 |
| MS.gene060193 | MS.gene069715 | 0.83859 | 2.63E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene069715 | 0.841827 | 3.75E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene069715 | 0.803142 | 4.01E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene069715 | 0.86849 | 6.28E-66 | -1.69E-46 |
| MS.gene060818 | MS.gene069715 | 0.820204 | 7.76E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene069715 | 0.830627 | 2.64E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene069715 | 0.823787 | 1.15E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene069715 | 0.828481 | 8.78E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene069715 | 0.801092 | 1.06E-48 | -1.69E-46 |
| MS.gene061051 | MS.gene069715 | -0.832314 | 1.01E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene069715 | 0.823544 | 1.31E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene069715 | 0.882963 | 6.70E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069715.t1 | MTR_1g082430 | 93.243 | 222 | 8 | 5 | 1 | 219 | 1 | 218 | 8.56e-144 | 401 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069715.t1 | AT5G27390 | 47.085 | 223 | 102 | 5 | 1 | 219 | 1 | 211 | 8.27e-62 | 193 |
| MS.gene069715.t1 | AT5G27390 | 47.085 | 223 | 102 | 5 | 1 | 219 | 1 | 211 | 2.14e-61 | 193 |
| MS.gene069715.t1 | AT5G27390 | 45.055 | 182 | 85 | 4 | 1 | 178 | 1 | 171 | 9.84e-44 | 145 |
| MS.gene069715.t1 | AT5G27390 | 45.556 | 180 | 83 | 4 | 1 | 176 | 1 | 169 | 2.17e-43 | 145 |
Find 61 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATACTATTTCTATGAATT+TGG | 0.148599 | 1.2:-60514448 | MS.gene069715:CDS |
| AGTGCCGGAATGAATCTTTA+TGG | 0.239943 | 1.2:-60515813 | MS.gene069715:CDS |
| TGCAAGATCAATCAAAATTA+AGG | 0.279168 | 1.2:-60514644 | MS.gene069715:CDS |
| GAGAATGAGGTTGCGGCGTT+TGG | 0.336028 | 1.2:+60517250 | None:intergenic |
| GGTATTGGCAATGCCAAGTT+TGG | 0.347275 | 1.2:+60517346 | None:intergenic |
| ACTTCTCTACTCTGCTGCTT+TGG | 0.355137 | 1.2:-60517224 | MS.gene069715:CDS |
| AGTTCCTGGTACCGTTTCTA+TGG | 0.357344 | 1.2:-60517125 | MS.gene069715:CDS |
| GCTTAAACTCACCTTCTTAG+AGG | 0.363505 | 1.2:-60515607 | MS.gene069715:intron |
| GTGCCGGAATGAATCTTTAT+GGG | 0.368982 | 1.2:-60515812 | MS.gene069715:CDS |
| AATGCTAGAAAGAATGGATT+CGG | 0.369766 | 1.2:+60517157 | None:intergenic |
| AGCAGCAGAGTAGAGAAGTT+TGG | 0.373628 | 1.2:+60517228 | None:intergenic |
| GTTGCGGCGTTTGGAGGTGG+TGG | 0.376996 | 1.2:+60517259 | None:intergenic |
| GCTGCAAAATTATTTATTCC+AGG | 0.382623 | 1.2:-60514858 | MS.gene069715:intron |
| TAGTAGGCTCAGGATATAAC+TGG | 0.385822 | 1.2:-60514900 | MS.gene069715:intron |
| GTAGAGAAGTTTGGAGAATG+AGG | 0.401843 | 1.2:+60517237 | None:intergenic |
| TTGCGGCGTTTGGAGGTGGT+GGG | 0.404161 | 1.2:+60517260 | None:intergenic |
| CTGTTCTGAACGTTATTACT+CGG | 0.408861 | 1.2:-60515641 | MS.gene069715:CDS |
| GAAGGATTTGGTGTTGGTAT+TGG | 0.429870 | 1.2:+60517331 | None:intergenic |
| TTATCCACATTTCCCAAACT+TGG | 0.431197 | 1.2:-60517359 | MS.gene069715:CDS |
| AATGAGGTTGCGGCGTTTGG+AGG | 0.435338 | 1.2:+60517253 | None:intergenic |
| TGGTACCGTTTCTATGGTGA+TGG | 0.435901 | 1.2:-60517119 | MS.gene069715:CDS |
| TGGTGGGGTTGTTGTTGTTG+AGG | 0.437784 | 1.2:+60517276 | None:intergenic |
| GTATTGGCAATGCCAAGTTT+GGG | 0.449030 | 1.2:+60517347 | None:intergenic |
| GCATTGAAAATACCAGTTCC+TGG | 0.451415 | 1.2:-60517139 | MS.gene069715:CDS |
| GTCCCCATAAAGATTCATTC+CGG | 0.471869 | 1.2:+60515809 | None:intergenic |
| GAGGTTGCGGCGTTTGGAGG+TGG | 0.480230 | 1.2:+60517256 | None:intergenic |
| AACTGGTTTAGCCTCCTTGA+AGG | 0.481925 | 1.2:-60514883 | MS.gene069715:CDS |
| ATAGAAACGGTACCAGGAAC+TGG | 0.489371 | 1.2:+60517127 | None:intergenic |
| ATGCTAGAAAGAATGGATTC+GGG | 0.490973 | 1.2:+60517158 | None:intergenic |
| TGCGGCGTTTGGAGGTGGTG+GGG | 0.491273 | 1.2:+60517261 | None:intergenic |
| GATAAAGCAGGTGGTAGTTG+AGG | 0.499700 | 1.2:+60517185 | None:intergenic |
| GGGAAATGTGGATAAAAGAA+TGG | 0.504323 | 1.2:+60517367 | None:intergenic |
| GAAGGTGAGTTTAAGCTGAC+TGG | 0.508321 | 1.2:+60515614 | None:intergenic |
| GTTGAGGCTGCTACAAATGA+TGG | 0.513227 | 1.2:+60517292 | None:intergenic |
| ATCAAAATTAAGGAAGCAGC+AGG | 0.517764 | 1.2:-60514634 | MS.gene069715:CDS |
| AAGTTTGGAGAATGAGGTTG+CGG | 0.522919 | 1.2:+60517243 | None:intergenic |
| GCACGGTTTGTATCTTCAGA+CGG | 0.529950 | 1.2:-60515762 | MS.gene069715:CDS |
| CTGTCTGATTACCTCTAAGA+AGG | 0.541391 | 1.2:+60515596 | None:intergenic |
| TGATCTGCACTTAGCAGTGA+TGG | 0.544292 | 1.2:-60514419 | MS.gene069715:CDS |
| ATCACCATAGAAACGGTACC+AGG | 0.545907 | 1.2:+60517121 | None:intergenic |
| ACCTGAGTTTCAAGATGTCA+TGG | 0.547354 | 1.2:-60517078 | MS.gene069715:CDS |
| CACGGTTTGTATCTTCAGAC+GGG | 0.552308 | 1.2:-60515761 | MS.gene069715:intron |
| CTGCACTTAGCAGTGATGGC+AGG | 0.555281 | 1.2:-60514415 | MS.gene069715:CDS |
| CGAAACCATCACCATAGAAA+CGG | 0.556431 | 1.2:+60517114 | None:intergenic |
| TCCATGACATCTTGAAACTC+AGG | 0.557107 | 1.2:+60517077 | None:intergenic |
| GGCAGGCGTACGAGGTGGAA+AGG | 0.562307 | 1.2:-60514398 | None:intergenic |
| TGTTCTGAACGTTATTACTC+GGG | 0.575609 | 1.2:-60515640 | MS.gene069715:CDS |
| GATGATGAAGGATTTGGTGT+TGG | 0.582126 | 1.2:+60517325 | None:intergenic |
| GCAGTGATGGCAGGCGTACG+AGG | 0.618959 | 1.2:-60514406 | MS.gene069715:CDS |
| ATGACATCTTGAAACTCAGG+TGG | 0.623514 | 1.2:+60517080 | None:intergenic |
| TGCCGGAATGAATCTTTATG+GGG | 0.630101 | 1.2:-60515811 | MS.gene069715:CDS |
| GATTCGGGTGAAGATAAAGC+AGG | 0.632755 | 1.2:+60517173 | None:intergenic |
| AATGCCAAGTTTGGGAAATG+TGG | 0.632899 | 1.2:+60517355 | None:intergenic |
| AAAATTAAGGAAGCAGCAGG+TGG | 0.633111 | 1.2:-60514631 | MS.gene069715:CDS |
| AAGAGAAGGAAGTTGTCGCA+CGG | 0.636464 | 1.2:-60515779 | MS.gene069715:CDS |
| TTGAGGCTGCTACAAATGAT+GGG | 0.647883 | 1.2:+60517293 | None:intergenic |
| GTGATGGCAGGCGTACGAGG+TGG | 0.650800 | 1.2:-60514403 | MS.gene069715:CDS |
| TCAAGATGTCATGGAACCTG+AGG | 0.659148 | 1.2:-60517069 | MS.gene069715:intron |
| TGACATCTTGAAACTCAGGT+GGG | 0.665257 | 1.2:+60517081 | None:intergenic |
| TGGGGACAGAGCAAAAGAGA+AGG | 0.666086 | 1.2:-60515793 | MS.gene069715:CDS |
| TCGGGTGAAGATAAAGCAGG+TGG | 0.694918 | 1.2:+60517176 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATACAAAATCTA+AGG | + | chr1.2:60516325-60516344 | None:intergenic | 10.0% |
| !! | ACAATACAATACAAAATCTA+AGG | + | chr1.2:60516360-60516379 | None:intergenic | 20.0% |
| !! | ATATATGTTAGTGCATAATA+AGG | + | chr1.2:60516062-60516081 | None:intergenic | 20.0% |
| !! | ATTAGAAAACCTTCTTTATA+TGG | + | chr1.2:60517296-60517315 | None:intergenic | 20.0% |
| !! | TTACAAGATTGAAATTCAAA+AGG | - | chr1.2:60515509-60515528 | MS.gene069715:intron | 20.0% |
| !! | TTTAATATTGAGTTATCATC+TGG | - | chr1.2:60516426-60516445 | MS.gene069715:intron | 20.0% |
| !!! | ACATACTATTTCTATGAATT+TGG | - | chr1.2:60517322-60517341 | MS.gene069715:CDS | 20.0% |
| !!! | TTGTTCTAAGTTTATCTTTA+TGG | - | chr1.2:60516966-60516985 | MS.gene069715:intron | 20.0% |
| ! | AAACACTTCTAATACTGTAT+TGG | - | chr1.2:60515560-60515579 | MS.gene069715:intron | 25.0% |
| ! | AAATAAGTGTTTATCCAAAG+AGG | - | chr1.2:60514874-60514893 | MS.gene069715:CDS | 25.0% |
| ! | AACACTTATTTGCAACTTAT+AGG | + | chr1.2:60514865-60514884 | None:intergenic | 25.0% |
| ! | AATAAGTGTTTATCCAAAGA+GGG | - | chr1.2:60514875-60514894 | MS.gene069715:CDS | 25.0% |
| ! | AATACAATCCAATGAGAATT+TGG | + | chr1.2:60515623-60515642 | None:intergenic | 25.0% |
| ! | ACTAAAATCCTACAAAGTAA+CGG | + | chr1.2:60515940-60515959 | None:intergenic | 25.0% |
| ! | AGTTCTTGAAAGCAAATAAA+AGG | + | chr1.2:60516474-60516493 | None:intergenic | 25.0% |
| ! | GGTTGAAAATTTATGCATAA+TGG | + | chr1.2:60516241-60516260 | None:intergenic | 25.0% |
| ! | TAAATCAGAAAGAAACCAAA+TGG | + | chr1.2:60516410-60516429 | None:intergenic | 25.0% |
| ! | TACATATTCTTCATTGTAGT+AGG | - | chr1.2:60516854-60516873 | MS.gene069715:intron | 25.0% |
| ! | TATTTGCATGAGAATGATTT+AGG | + | chr1.2:60514901-60514920 | None:intergenic | 25.0% |
| ! | TGAAAATTTATGCATAATGG+AGG | + | chr1.2:60516238-60516257 | None:intergenic | 25.0% |
| ! | TGCAAGATCAATCAAAATTA+AGG | - | chr1.2:60517126-60517145 | MS.gene069715:CDS | 25.0% |
| ! | TTCATGTAAGTTATAACTTG+TGG | + | chr1.2:60514806-60514825 | None:intergenic | 25.0% |
| !! | AAAGAAGGTTTTCTAATTTC+AGG | - | chr1.2:60517299-60517318 | MS.gene069715:CDS | 25.0% |
| !! | ATTTTCAATGCTAGAAAGAA+TGG | + | chr1.2:60514622-60514641 | None:intergenic | 25.0% |
| !! | CATTCTCATGCAAATAATTT+TGG | - | chr1.2:60514905-60514924 | MS.gene069715:intron | 25.0% |
| !! | CTTTTAATCACAATTTCCTA+GGG | - | chr1.2:60514745-60514764 | MS.gene069715:intron | 25.0% |
| !! | GAAAATTTATGCATAATGGA+GGG | + | chr1.2:60516237-60516256 | None:intergenic | 25.0% |
| !! | TATGCATAAATTTTCAACCA+TGG | - | chr1.2:60516242-60516261 | MS.gene069715:intron | 25.0% |
| !! | TCTTTTAATCACAATTTCCT+AGG | - | chr1.2:60514744-60514763 | MS.gene069715:intron | 25.0% |
| !! | TTTTTGTTACAGTTAGATGA+TGG | + | chr1.2:60515689-60515708 | None:intergenic | 25.0% |
| !!! | TGTTAGTTTTCTGTTAATTG+AGG | + | chr1.2:60515723-60515742 | None:intergenic | 25.0% |
| !!! | TTTTTCTTGTTATAAGCTCA+AGG | - | chr1.2:60516827-60516846 | MS.gene069715:intron | 25.0% |
| AAACCAAGAATTAGAAGGAA+AGG | + | chr1.2:60517054-60517073 | None:intergenic | 30.0% | |
| AAATGGCAAACAATGAACAA+AGG | + | chr1.2:60516393-60516412 | None:intergenic | 30.0% | |
| AACCAAGAATTAGAAGGAAA+GGG | + | chr1.2:60517053-60517072 | None:intergenic | 30.0% | |
| ACAAGTTATCCAAGAAAAGA+AGG | - | chr1.2:60517245-60517264 | MS.gene069715:CDS | 30.0% | |
| AGGAAAAACCAAATTCTCAT+TGG | - | chr1.2:60515612-60515631 | MS.gene069715:CDS | 30.0% | |
| AGGAAAAGTTTGCAATAAGA+AGG | + | chr1.2:60516454-60516473 | None:intergenic | 30.0% | |
| ATAATCGTTATGAGCAAAGA+AGG | + | chr1.2:60515485-60515504 | None:intergenic | 30.0% | |
| ATAGATCATTCAACAAGTCT+CGG | - | chr1.2:60515183-60515202 | MS.gene069715:intron | 30.0% | |
| ATGATAGCTAAGAACAGATT+TGG | + | chr1.2:60515350-60515369 | None:intergenic | 30.0% | |
| CACTAACATATATGTTCAGA+AGG | - | chr1.2:60516069-60516088 | MS.gene069715:intron | 30.0% | |
| CATTTACGTAACGAAATGAT+GGG | + | chr1.2:60517007-60517026 | None:intergenic | 30.0% | |
| CTTGTTGAATGATCTATAAG+AGG | + | chr1.2:60515180-60515199 | None:intergenic | 30.0% | |
| GCTGCAAAATTATTTATTCC+AGG | - | chr1.2:60516912-60516931 | MS.gene069715:intron | 30.0% | |
| TAATCGTTATGAGCAAAGAA+GGG | + | chr1.2:60515484-60515503 | None:intergenic | 30.0% | |
| TAGTGCATAATAAGGAAGTT+AGG | + | chr1.2:60516054-60516073 | None:intergenic | 30.0% | |
| TATTTGCAACTTATAGGACA+AGG | + | chr1.2:60514859-60514878 | None:intergenic | 30.0% | |
| TCATTTACGTAACGAAATGA+TGG | + | chr1.2:60517008-60517027 | None:intergenic | 30.0% | |
| TCTTTGCTCATAACGATTAT+AGG | - | chr1.2:60515485-60515504 | MS.gene069715:intron | 30.0% | |
| TTATCCAAGAAAAGAAGGTT+TGG | - | chr1.2:60517250-60517269 | MS.gene069715:CDS | 30.0% | |
| TTCCTTCTAATTCTTGGTTT+CGG | - | chr1.2:60517054-60517073 | MS.gene069715:intron | 30.0% | |
| TTTGTTCATTGTTTGCCATT+TGG | - | chr1.2:60516392-60516411 | MS.gene069715:intron | 30.0% | |
| ! | AATGCTAGAAAGAATGGATT+CGG | + | chr1.2:60514616-60514635 | None:intergenic | 30.0% |
| ! | AGTTTTCTGTTAATTGAGGT+TGG | + | chr1.2:60515719-60515738 | None:intergenic | 30.0% |
| ! | TTTATCTTCCGTTACTTTGT+AGG | - | chr1.2:60515929-60515948 | MS.gene069715:intron | 30.0% |
| !! | ATTATGGTTGATTTTCACCA+TGG | - | chr1.2:60515094-60515113 | MS.gene069715:intron | 30.0% |
| !!! | CATGCAAATAATTTTGGTTG+TGG | - | chr1.2:60514911-60514930 | MS.gene069715:intron | 30.0% |
| !!! | TTTTGAGATGATGAAGGATT+TGG | + | chr1.2:60514454-60514473 | None:intergenic | 30.0% |
| AAATACCAAACACTAAGCCA+TGG | + | chr1.2:60516262-60516281 | None:intergenic | 35.0% | |
| AATCGTTATGAGCAAAGAAG+GGG | + | chr1.2:60515483-60515502 | None:intergenic | 35.0% | |
| ACAGCACATCCATATAAAGA+AGG | - | chr1.2:60517284-60517303 | MS.gene069715:CDS | 35.0% | |
| ACCTATGCATTCACATTACA+TGG | + | chr1.2:60516298-60516317 | None:intergenic | 35.0% | |
| AGAATTGAATGTAGTACCTC+AGG | + | chr1.2:60514720-60514739 | None:intergenic | 35.0% | |
| AGTTCTTGAAGACATAAGCA+AGG | + | chr1.2:60516537-60516556 | None:intergenic | 35.0% | |
| ATCAAAATTAAGGAAGCAGC+AGG | - | chr1.2:60517136-60517155 | MS.gene069715:CDS | 35.0% | |
| ATCTATGTTAGAGTGACTTG+AGG | + | chr1.2:60516786-60516805 | None:intergenic | 35.0% | |
| ATGTCTTCAAGAACTTAGGT+TGG | - | chr1.2:60516542-60516561 | MS.gene069715:intron | 35.0% | |
| CAGCTAATCTGTTACAATCA+TGG | + | chr1.2:60516112-60516131 | None:intergenic | 35.0% | |
| GAGAATTTACAAATTGCACC+TGG | + | chr1.2:60516933-60516952 | None:intergenic | 35.0% | |
| GAGGTTTAAATTGACAAAGC+AGG | + | chr1.2:60515161-60515180 | None:intergenic | 35.0% | |
| GCAAAGTTCTTTCTTGAGTT+GGG | - | chr1.2:60515125-60515144 | MS.gene069715:intron | 35.0% | |
| GCTTATGTCTTCAAGAACTT+AGG | - | chr1.2:60516538-60516557 | MS.gene069715:intron | 35.0% | |
| GGGAAATGTGGATAAAAGAA+TGG | + | chr1.2:60514406-60514425 | None:intergenic | 35.0% | |
| GTAATGTGAATGCATAGGTT+TGG | - | chr1.2:60516299-60516318 | MS.gene069715:intron | 35.0% | |
| GTCATAACTACGAGTAATGA+TGG | - | chr1.2:60515648-60515667 | MS.gene069715:CDS | 35.0% | |
| TAGATCATTCAACAAGTCTC+GGG | - | chr1.2:60515184-60515203 | MS.gene069715:intron | 35.0% | |
| TCATCTCTAGCAGCTAATTA+TGG | - | chr1.2:60515078-60515097 | MS.gene069715:intron | 35.0% | |
| TCCATGTAATGTGAATGCAT+AGG | - | chr1.2:60516294-60516313 | MS.gene069715:intron | 35.0% | |
| TCGAATAAGTCAATCCAAAC+AGG | + | chr1.2:60514771-60514790 | None:intergenic | 35.0% | |
| TCTTCTTGTATCCCTTTAAC+AGG | + | chr1.2:60515447-60515466 | None:intergenic | 35.0% | |
| TGATCTGTCTAATGAACTGT+TGG | - | chr1.2:60515835-60515854 | MS.gene069715:intron | 35.0% | |
| TGCAAAGTTCTTTCTTGAGT+TGG | - | chr1.2:60515124-60515143 | MS.gene069715:intron | 35.0% | |
| TGCTTTCAAGAACTTAGACT+GGG | - | chr1.2:60516480-60516499 | MS.gene069715:intron | 35.0% | |
| TGTCTTCAAGAACTTAGGTT+GGG | - | chr1.2:60516543-60516562 | MS.gene069715:intron | 35.0% | |
| TTATCCACATTTCCCAAACT+TGG | - | chr1.2:60514411-60514430 | MS.gene069715:CDS | 35.0% | |
| TTCCCTTTCCTTCTAATTCT+TGG | - | chr1.2:60517048-60517067 | MS.gene069715:intron | 35.0% | |
| TTGCTTTCAAGAACTTAGAC+TGG | - | chr1.2:60516479-60516498 | MS.gene069715:intron | 35.0% | |
| TTTGTCATCGCTAAAGACAA+TGG | + | chr1.2:60515002-60515021 | None:intergenic | 35.0% | |
| ! | ATGCTAGAAAGAATGGATTC+GGG | + | chr1.2:60514615-60514634 | None:intergenic | 35.0% |
| ! | CTGTTCTGAACGTTATTACT+CGG | - | chr1.2:60516129-60516148 | MS.gene069715:intron | 35.0% |
| ! | TAATTTTGCAGCATCCTTCA+AGG | + | chr1.2:60516904-60516923 | None:intergenic | 35.0% |
| ! | TAGACCAAACCTTCTTTTCT+TGG | + | chr1.2:60517257-60517276 | None:intergenic | 35.0% |
| ! | TGTTCTGAACGTTATTACTC+GGG | - | chr1.2:60516130-60516149 | MS.gene069715:intron | 35.0% |
| !! | ACTTTGTAGGATTTTAGTGC+CGG | - | chr1.2:60515942-60515961 | MS.gene069715:intron | 35.0% |
| AAAATTAAGGAAGCAGCAGG+TGG | - | chr1.2:60517139-60517158 | MS.gene069715:CDS | 40.0% | |
| AAGTTTGGAGAATGAGGTTG+CGG | + | chr1.2:60514530-60514549 | None:intergenic | 40.0% | |
| AATGCCAAGTTTGGGAAATG+TGG | + | chr1.2:60514418-60514437 | None:intergenic | 40.0% | |
| AATGCCCAACCTACTATGTA+TGG | + | chr1.2:60515285-60515304 | None:intergenic | 40.0% | |
| ACCTGAGTTTCAAGATGTCA+TGG | - | chr1.2:60514692-60514711 | MS.gene069715:intron | 40.0% | |
| AGAATGATTTAGGCCCTCTT+TGG | + | chr1.2:60514891-60514910 | None:intergenic | 40.0% | |
| ATGACATCTTGAAACTCAGG+TGG | + | chr1.2:60514693-60514712 | None:intergenic | 40.0% | |
| ATGCCCAACCTACTATGTAT+GGG | + | chr1.2:60515284-60515303 | None:intergenic | 40.0% | |
| ATGTCTTCAAGAACTTAGGC+TGG | - | chr1.2:60516605-60516624 | MS.gene069715:intron | 40.0% | |
| ATTGAGCTCCCATACATAGT+AGG | - | chr1.2:60515273-60515292 | MS.gene069715:intron | 40.0% | |
| CACCGAAACCAAGAATTAGA+AGG | + | chr1.2:60517059-60517078 | None:intergenic | 40.0% | |
| CAGGTGACATTTACAGATCT+TGG | + | chr1.2:60515393-60515412 | None:intergenic | 40.0% | |
| CGAAACCATCACCATAGAAA+CGG | + | chr1.2:60514659-60514678 | None:intergenic | 40.0% | |
| CGCAAATCAAGACATAAGCA+AGG | + | chr1.2:60516663-60516682 | None:intergenic | 40.0% | |
| CTAGGGTATGTTTGAATTGG+TGG | - | chr1.2:60515027-60515046 | MS.gene069715:intron | 40.0% | |
| CTTGAGGCATAAAAACCCAA+TGG | + | chr1.2:60516770-60516789 | None:intergenic | 40.0% | |
| GCACTAGGGTATGTTTGAAT+TGG | - | chr1.2:60515024-60515043 | MS.gene069715:intron | 40.0% | |
| GCAGACTAATGACAAATCGT+GGG | - | chr1.2:60515586-60515605 | MS.gene069715:intron | 40.0% | |
| GCATTCACATTACATGGACT+TGG | + | chr1.2:60516292-60516311 | None:intergenic | 40.0% | |
| GCATTGAAAATACCAGTTCC+TGG | - | chr1.2:60514631-60514650 | MS.gene069715:CDS | 40.0% | |
| GCTTAAACTCACCTTCTTAG+AGG | - | chr1.2:60516163-60516182 | MS.gene069715:intron | 40.0% | |
| GTAGAGAAGTTTGGAGAATG+AGG | + | chr1.2:60514536-60514555 | None:intergenic | 40.0% | |
| GTCCCCATAAAGATTCATTC+CGG | + | chr1.2:60515964-60515983 | None:intergenic | 40.0% | |
| GTGACATTTACAGATCTTGG+AGG | + | chr1.2:60515390-60515409 | None:intergenic | 40.0% | |
| GTGCCGGAATGAATCTTTAT+GGG | - | chr1.2:60515958-60515977 | MS.gene069715:intron | 40.0% | |
| TAATGACAAATCGTGGGAGA+AGG | - | chr1.2:60515592-60515611 | MS.gene069715:intron | 40.0% | |
| TAGAGGTAATCAGACAGTCA+AGG | - | chr1.2:60516180-60516199 | MS.gene069715:intron | 40.0% | |
| TAGCTATCATTCCATGCACA+TGG | - | chr1.2:60515360-60515379 | MS.gene069715:intron | 40.0% | |
| TAGTAGGCTCAGGATATAAC+TGG | - | chr1.2:60516870-60516889 | MS.gene069715:intron | 40.0% | |
| TCCATGACATCTTGAAACTC+AGG | + | chr1.2:60514696-60514715 | None:intergenic | 40.0% | |
| TGACATCTTGAAACTCAGGT+GGG | + | chr1.2:60514692-60514711 | None:intergenic | 40.0% | |
| TGCAGACTAATGACAAATCG+TGG | - | chr1.2:60515585-60515604 | MS.gene069715:intron | 40.0% | |
| TGCCGGAATGAATCTTTATG+GGG | - | chr1.2:60515959-60515978 | MS.gene069715:intron | 40.0% | |
| TGTGTATGTATCAGTGCCAT+TGG | - | chr1.2:60516751-60516770 | MS.gene069715:intron | 40.0% | |
| TTCAACCATGGCTTAGTGTT+TGG | - | chr1.2:60516254-60516273 | MS.gene069715:intron | 40.0% | |
| TTCTTCATTGTAGTAGGCTC+AGG | - | chr1.2:60516860-60516879 | MS.gene069715:intron | 40.0% | |
| TTGAGGCTGCTACAAATGAT+GGG | + | chr1.2:60514480-60514499 | None:intergenic | 40.0% | |
| TTTGCCCAAAATGTACATGC+AGG | - | chr1.2:60517085-60517104 | MS.gene069715:CDS | 40.0% | |
| ! | AGTGCCGGAATGAATCTTTA+TGG | - | chr1.2:60515957-60515976 | MS.gene069715:intron | 40.0% |
| ! | CTGTCTGATTACCTCTAAGA+AGG | + | chr1.2:60516177-60516196 | None:intergenic | 40.0% |
| ! | GTATTGGCAATGCCAAGTTT+GGG | + | chr1.2:60514426-60514445 | None:intergenic | 40.0% |
| ! | GTGTATGTATCAGTGCCATT+GGG | - | chr1.2:60516752-60516771 | MS.gene069715:intron | 40.0% |
| !! | ATTGGTGGTGTAGTCTAGTT+AGG | - | chr1.2:60515042-60515061 | MS.gene069715:intron | 40.0% |
| !! | GAAGGATTTGGTGTTGGTAT+TGG | + | chr1.2:60514442-60514461 | None:intergenic | 40.0% |
| !! | GATGATGAAGGATTTGGTGT+TGG | + | chr1.2:60514448-60514467 | None:intergenic | 40.0% |
| !! | TTCTTGAGTTGGGAAGTTTG+AGG | - | chr1.2:60515135-60515154 | MS.gene069715:intron | 40.0% |
| !! | TTGGTGGTGTAGTCTAGTTA+GGG | - | chr1.2:60515043-60515062 | MS.gene069715:intron | 40.0% |
| !!! | GGGTACTTTTGAGATGATGA+AGG | + | chr1.2:60514460-60514479 | None:intergenic | 40.0% |
| AAGAGAAGGAAGTTGTCGCA+CGG | - | chr1.2:60515991-60516010 | MS.gene069715:intron | 45.0% | |
| ACAAGCCAAGGCCTGTTAAA+GGG | - | chr1.2:60515433-60515452 | MS.gene069715:intron | 45.0% | |
| ACAATTTCCTAGGGCCTGTT+TGG | - | chr1.2:60514754-60514773 | MS.gene069715:intron | 45.0% | |
| ACACACGCACATGTTCTTCT+TGG | + | chr1.2:60516730-60516749 | None:intergenic | 45.0% | |
| AGCAGCAGAGTAGAGAAGTT+TGG | + | chr1.2:60514545-60514564 | None:intergenic | 45.0% | |
| AGCGATGACAAACTGCACTA+GGG | - | chr1.2:60515010-60515029 | MS.gene069715:intron | 45.0% | |
| AGCTCCCATACATAGTAGGT+TGG | - | chr1.2:60515277-60515296 | MS.gene069715:intron | 45.0% | |
| AGTTCCTGGTACCGTTTCTA+TGG | - | chr1.2:60514645-60514664 | MS.gene069715:CDS | 45.0% | |
| ATAGAAACGGTACCAGGAAC+TGG | + | chr1.2:60514646-60514665 | None:intergenic | 45.0% | |
| ATCACCATAGAAACGGTACC+AGG | + | chr1.2:60514652-60514671 | None:intergenic | 45.0% | |
| CACGGTTTGTATCTTCAGAC+GGG | - | chr1.2:60516009-60516028 | MS.gene069715:intron | 45.0% | |
| CCCAAAATGTACATGCAGGA+GGG | - | chr1.2:60517089-60517108 | MS.gene069715:CDS | 45.0% | |
| CTGTAAATGTCACCTGCCAA+GGG | - | chr1.2:60515397-60515416 | MS.gene069715:intron | 45.0% | |
| GAACTTTGCAAACGCAACCA+TGG | + | chr1.2:60515114-60515133 | None:intergenic | 45.0% | |
| GAAGGTGAGTTTAAGCTGAC+TGG | + | chr1.2:60516159-60516178 | None:intergenic | 45.0% | |
| GACTCTGGCAGTGATTTCTT+TGG | - | chr1.2:60515215-60515234 | MS.gene069715:intron | 45.0% | |
| GATAAAGCAGGTGGTAGTTG+AGG | + | chr1.2:60514588-60514607 | None:intergenic | 45.0% | |
| GATTCGGGTGAAGATAAAGC+AGG | + | chr1.2:60514600-60514619 | None:intergenic | 45.0% | |
| GCACGGTTTGTATCTTCAGA+CGG | - | chr1.2:60516008-60516027 | MS.gene069715:intron | 45.0% | |
| GCTCCCATACATAGTAGGTT+GGG | - | chr1.2:60515278-60515297 | MS.gene069715:intron | 45.0% | |
| GTTGAGGCTGCTACAAATGA+TGG | + | chr1.2:60514481-60514500 | None:intergenic | 45.0% | |
| TACAAGCCAAGGCCTGTTAA+AGG | - | chr1.2:60515432-60515451 | MS.gene069715:intron | 45.0% | |
| TAGCGATGACAAACTGCACT+AGG | - | chr1.2:60515009-60515028 | MS.gene069715:intron | 45.0% | |
| TCAAGATGTCATGGAACCTG+AGG | - | chr1.2:60514701-60514720 | MS.gene069715:intron | 45.0% | |
| TCTCGGGTAATAGATGACTC+TGG | - | chr1.2:60515200-60515219 | MS.gene069715:intron | 45.0% | |
| TCTGTAAATGTCACCTGCCA+AGG | - | chr1.2:60515396-60515415 | MS.gene069715:intron | 45.0% | |
| TGAGACACAAGTACAAGCCA+AGG | - | chr1.2:60515421-60515440 | MS.gene069715:intron | 45.0% | |
| TGATCTGCACTTAGCAGTGA+TGG | - | chr1.2:60517351-60517370 | MS.gene069715:CDS | 45.0% | |
| TGGTACCGTTTCTATGGTGA+TGG | - | chr1.2:60514651-60514670 | MS.gene069715:CDS | 45.0% | |
| TGTATCCCTTTAACAGGCCT+TGG | + | chr1.2:60515441-60515460 | None:intergenic | 45.0% | |
| ! | AACTGGTTTAGCCTCCTTGA+AGG | - | chr1.2:60516887-60516906 | MS.gene069715:intron | 45.0% |
| ! | ACCCTCCTGCATGTACATTT+TGG | + | chr1.2:60517093-60517112 | None:intergenic | 45.0% |
| ! | ACTTCTCTACTCTGCTGCTT+TGG | - | chr1.2:60514546-60514565 | MS.gene069715:intron | 45.0% |
| ! | CCCTCCTGCATGTACATTTT+GGG | + | chr1.2:60517092-60517111 | None:intergenic | 45.0% |
| ! | TTTTGCAGCATCCTTCAAGG+AGG | + | chr1.2:60516901-60516920 | None:intergenic | 45.0% |
| !! | GGTATTGGCAATGCCAAGTT+TGG | + | chr1.2:60514427-60514446 | None:intergenic | 45.0% |
| AGTCAATCCAAACAGGCCCT+AGG | + | chr1.2:60514764-60514783 | None:intergenic | 50.0% | |
| GCCCAAAATGTACATGCAGG+AGG | - | chr1.2:60517088-60517107 | MS.gene069715:CDS | 50.0% | |
| TCGGGTGAAGATAAAGCAGG+TGG | + | chr1.2:60514597-60514616 | None:intergenic | 50.0% | |
| TGGGGACAGAGCAAAAGAGA+AGG | - | chr1.2:60515977-60515996 | MS.gene069715:intron | 50.0% | |
| TGTACTTGTGTCTCAGCCCT+TGG | + | chr1.2:60515416-60515435 | None:intergenic | 50.0% | |
| ! | AGGAAGCAGCAGGTGGTTTT+AGG | - | chr1.2:60517146-60517165 | MS.gene069715:CDS | 50.0% |
| ! | TGGTGGGGTTGTTGTTGTTG+AGG | + | chr1.2:60514497-60514516 | None:intergenic | 50.0% |
| AATGAGGTTGCGGCGTTTGG+AGG | + | chr1.2:60514520-60514539 | None:intergenic | 55.0% | |
| CTGCACTTAGCAGTGATGGC+AGG | - | chr1.2:60517355-60517374 | MS.gene069715:CDS | 55.0% | |
| GAGAATGAGGTTGCGGCGTT+TGG | + | chr1.2:60514523-60514542 | None:intergenic | 55.0% | |
| TTGGAGGAGAGCCATGTGCA+TGG | + | chr1.2:60515374-60515393 | None:intergenic | 55.0% | |
| CTTGTGTCTCAGCCCTTGGC+AGG | + | chr1.2:60515412-60515431 | None:intergenic | 60.0% | |
| TTGCGGCGTTTGGAGGTGGT+GGG | + | chr1.2:60514513-60514532 | None:intergenic | 60.0% | |
| GAGGTTGCGGCGTTTGGAGG+TGG | + | chr1.2:60514517-60514536 | None:intergenic | 65.0% | |
| GCAGTGATGGCAGGCGTACG+AGG | - | chr1.2:60517364-60517383 | MS.gene069715:CDS | 65.0% | |
| GTGATGGCAGGCGTACGAGG+TGG | - | chr1.2:60517367-60517386 | MS.gene069715:CDS | 65.0% | |
| GTTGCGGCGTTTGGAGGTGG+TGG | + | chr1.2:60514514-60514533 | None:intergenic | 65.0% | |
| TGCGGCGTTTGGAGGTGGTG+GGG | + | chr1.2:60514512-60514531 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 60514399 | 60517393 | 60514399 | ID=MS.gene069715 |
| chr1.2 | mRNA | 60514399 | 60517393 | 60514399 | ID=MS.gene069715.t1;Parent=MS.gene069715 |
| chr1.2 | exon | 60517070 | 60517393 | 60517070 | ID=MS.gene069715.t1.exon1;Parent=MS.gene069715.t1 |
| chr1.2 | CDS | 60517070 | 60517393 | 60517070 | ID=cds.MS.gene069715.t1;Parent=MS.gene069715.t1 |
| chr1.2 | exon | 60515762 | 60515841 | 60515762 | ID=MS.gene069715.t1.exon2;Parent=MS.gene069715.t1 |
| chr1.2 | CDS | 60515762 | 60515841 | 60515762 | ID=cds.MS.gene069715.t1;Parent=MS.gene069715.t1 |
| chr1.2 | exon | 60515608 | 60515668 | 60515608 | ID=MS.gene069715.t1.exon3;Parent=MS.gene069715.t1 |
| chr1.2 | CDS | 60515608 | 60515668 | 60515608 | ID=cds.MS.gene069715.t1;Parent=MS.gene069715.t1 |
| chr1.2 | exon | 60514859 | 60514916 | 60514859 | ID=MS.gene069715.t1.exon4;Parent=MS.gene069715.t1 |
| chr1.2 | CDS | 60514859 | 60514916 | 60514859 | ID=cds.MS.gene069715.t1;Parent=MS.gene069715.t1 |
| chr1.2 | exon | 60514625 | 60514685 | 60514625 | ID=MS.gene069715.t1.exon5;Parent=MS.gene069715.t1 |
| chr1.2 | CDS | 60514625 | 60514685 | 60514625 | ID=cds.MS.gene069715.t1;Parent=MS.gene069715.t1 |
| chr1.2 | exon | 60514399 | 60514471 | 60514399 | ID=MS.gene069715.t1.exon6;Parent=MS.gene069715.t1 |
| chr1.2 | CDS | 60514399 | 60514471 | 60514399 | ID=cds.MS.gene069715.t1;Parent=MS.gene069715.t1 |
| Gene Sequence |
| Protein sequence |
