AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37315


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37315.t1 MTR_0459s0020 79.502 522 104 3 1 519 9 530 0.0 840
MS.gene37315.t1 MTR_3g107730 70.736 516 148 1 4 519 1 513 0.0 779
MS.gene37315.t1 MTR_3g107730 70.736 516 148 1 4 519 1 513 0.0 777
MS.gene37315.t1 MTR_1g011840 69.786 513 152 1 7 519 3 512 0.0 748
MS.gene37315.t1 MTR_0366s0020 69.171 519 79 2 1 519 9 446 0.0 697
MS.gene37315.t1 MTR_7g110000 59.735 529 203 2 1 519 1 529 0.0 630
MS.gene37315.t1 MTR_2g032690 58.046 522 209 3 7 519 7 527 0.0 603
MS.gene37315.t1 MTR_3g077670 58.223 529 211 4 1 519 1 529 0.0 602
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37315.t1 AT1G15460 73.563 522 131 2 5 519 10 531 0.0 814
MS.gene37315.t1 AT1G15460 73.563 522 131 2 5 519 10 531 0.0 814
MS.gene37315.t1 AT1G15460 73.563 522 131 2 5 519 10 531 0.0 810
MS.gene37315.t1 AT1G74810 70.342 526 149 3 1 519 6 531 0.0 787
MS.gene37315.t1 AT1G74810 70.342 526 149 3 1 519 6 531 0.0 787
MS.gene37315.t1 AT1G74810 70.342 526 149 3 1 519 6 531 0.0 787
MS.gene37315.t1 AT5G25430 67.961 515 163 1 7 519 9 523 0.0 744
MS.gene37315.t1 AT4G32510 68.008 522 164 3 1 519 1 522 0.0 741
MS.gene37315.t1 AT1G74810 71.283 491 134 3 36 519 9 499 0.0 741
MS.gene37315.t1 AT1G74810 71.283 491 134 3 36 519 9 499 0.0 741
MS.gene37315.t1 AT4G32510 68.008 522 164 3 1 519 1 522 0.0 741
MS.gene37315.t1 AT1G15460 72.706 425 109 2 102 519 1 425 0.0 650
MS.gene37315.t1 AT3G62270 60.000 525 204 1 1 519 1 525 0.0 647
MS.gene37315.t1 AT2G47160 60.190 525 203 1 1 519 1 525 0.0 647
MS.gene37315.t1 AT3G06450 57.752 516 215 1 7 519 9 524 0.0 636
MS.gene37315.t1 AT3G06450 57.752 516 215 1 7 519 9 524 0.0 636
MS.gene37315.t1 AT3G06450 57.752 516 215 1 7 519 9 524 0.0 636
MS.gene37315.t1 AT3G06450 57.752 516 215 1 7 519 9 524 0.0 636
MS.gene37315.t1 AT2G47160 57.455 550 203 2 1 519 1 550 0.0 634
MS.gene37315.t1 AT1G74810 69.882 425 121 3 102 519 1 425 0.0 629
MS.gene37315.t1 AT1G74810 70.103 388 109 3 139 519 1 388 0.0 573

Find 108 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATCATACATTCAATTAT+TGG 0.192328 4.4:-88036663 MS.gene37315:CDS
TCACTTATAATTCCCTTAAA+AGG 0.220686 4.4:+88037949 None:intergenic
GTCTTCCTGGTAATCAATTC+TGG 0.223462 4.4:-88033082 MS.gene37315:CDS
CACATACTGACTCACCTTAA+TGG 0.253705 4.4:+88035781 None:intergenic
CTTTGCTCATTTACTCTAAC+AGG 0.255775 4.4:+88033221 None:intergenic
TGTGCTTTCCGTTCTGGTAT+TGG 0.264166 4.4:-88037886 MS.gene37315:CDS
TGCCTTTCTTGGTGGTAGTA+TGG 0.266787 4.4:-88035181 MS.gene37315:CDS
TGGACTTGTGCTTTCCGTTC+TGG 0.268770 4.4:-88037892 MS.gene37315:CDS
AGACTATGGTGTGCCTTTCT+TGG 0.270893 4.4:-88035192 MS.gene37315:CDS
AGAGCAAGATCTTGGTTATA+TGG 0.279601 4.4:-88035533 MS.gene37315:CDS
CATTATGACATATTCTTACT+AGG 0.298991 4.4:-88034722 MS.gene37315:CDS
TCACATAAAGCCAGTGAAAT+TGG 0.304348 4.4:+88035615 None:intergenic
GTTCATTCAAGAGGCCATTA+AGG 0.306748 4.4:-88035795 MS.gene37315:intron
GTGCTTTCCGTTCTGGTATT+GGG 0.307157 4.4:-88037885 MS.gene37315:intron
GCTTTACCTGTTATTGCCTT+TGG 0.313809 4.4:-88037738 MS.gene37315:CDS
CTAAAAGAGGTAATCCTAAA+AGG 0.314929 4.4:-88033305 MS.gene37315:CDS
CTTTATGTGAATGGTTTACT+AGG 0.330252 4.4:-88035602 MS.gene37315:CDS
GCTAGCAACTCTGAAATCTA+TGG 0.346046 4.4:-88033812 MS.gene37315:CDS
CTTTGATCATAGCGTTGCTT+CGG 0.348715 4.4:-88034792 MS.gene37315:CDS
TTTGATCATAGCGTTGCTTC+GGG 0.355202 4.4:-88034791 MS.gene37315:CDS
ATGGCCATTGATAGTCTTCC+TGG 0.358761 4.4:-88033095 MS.gene37315:CDS
CTAGGTATTATATTCACATT+TGG 0.359706 4.4:-88035584 MS.gene37315:CDS
GCAAGCAGTGTTTGTAGAAA+TGG 0.366878 4.4:-88033783 MS.gene37315:CDS
ATTCCTGCCTTGATGGTAGC+AGG 0.375523 4.4:-88034824 MS.gene37315:CDS
AGAAGCTTTATTGCAGACTA+TGG 0.379594 4.4:-88035206 MS.gene37315:CDS
TGCTCACCAAAGGCAATAAC+AGG 0.383728 4.4:+88037732 None:intergenic
TTTCACTGGCTTTATGTGAA+TGG 0.387832 4.4:-88035611 MS.gene37315:CDS
CATATTCTTACTAGGATTTG+TGG 0.394900 4.4:-88034714 MS.gene37315:intron
AATTTCTCAGGGTTTGTGTA+TGG 0.396610 4.4:-88035922 MS.gene37315:intron
AGAGGAGCAACTAGTCTTCT+TGG 0.398425 4.4:+88035113 None:intergenic
CTTTCAGACTTCTGTGGAAA+GGG 0.407120 4.4:-88033339 MS.gene37315:intron
GTGGGGATACTTTGCATACA+TGG 0.407230 4.4:-88033114 MS.gene37315:CDS
CACAATGTTATAAAGATGAT+TGG 0.423839 4.4:-88037912 MS.gene37315:CDS
ACTTTGATTTGTGGACTACT+TGG 0.424729 4.4:-88034577 MS.gene37315:CDS
ATCCTAAAAGGTGAAGATAA+AGG 0.426756 4.4:-88033293 MS.gene37315:CDS
TTCTCTTTGTATCACCTAGT+AGG 0.427294 4.4:-88033046 MS.gene37315:CDS
CTGGCTTCTACAGCCATTTG+TGG 0.431750 4.4:-88036684 MS.gene37315:CDS
ATATCGTCAACAGATTTACT+AGG 0.432276 4.4:-88035856 MS.gene37315:CDS
GACTAGTTGCTCCTCTAGCT+TGG 0.433751 4.4:-88035106 MS.gene37315:CDS
AGAGCAGAAGAGCAAGATCT+TGG 0.434649 4.4:-88035541 MS.gene37315:CDS
CATGCGTCAATATGCTTCTC+AGG 0.440694 4.4:+88033248 None:intergenic
ACTTACTTGAACCACCTACT+AGG 0.441604 4.4:+88033032 None:intergenic
GAGCAAGATCTTGGTTATAT+GGG 0.443047 4.4:-88035532 MS.gene37315:CDS
GCAAAGAAAATATAGGTAGT+TGG 0.454754 4.4:+88037765 None:intergenic
AATCTACATCTTTACACCAT+TGG 0.456846 4.4:-88035082 MS.gene37315:CDS
AGATCTTGGTTATATGGGAC+AGG 0.463073 4.4:-88035527 MS.gene37315:intron
TCTTCCTGGTAATCAATTCT+GGG 0.464011 4.4:-88033081 MS.gene37315:CDS
CTCCTACAATGAGGAGTGGT+TGG 0.469360 4.4:+88036637 None:intergenic
ACGTTACAGACTTTGATTTG+TGG 0.470008 4.4:-88034586 MS.gene37315:intron
TATCCCCACAAAACAGAAGT+TGG 0.470017 4.4:+88033128 None:intergenic
TTTAGCAAAGTTGTACAAGT+AGG 0.472082 4.4:+88036587 None:intergenic
CTATGGTGTGCCTTTCTTGG+TGG 0.474834 4.4:-88035189 MS.gene37315:CDS
CTCCTAGCGATATTTAATGT+TGG 0.476035 4.4:-88035881 MS.gene37315:CDS
TGAATGTATGATTCCACAAA+TGG 0.480302 4.4:+88036671 None:intergenic
TTCAGTCTTGTTCATTCAAG+AGG 0.484712 4.4:-88035804 MS.gene37315:CDS
CTTTCCCAGAATTGATTACC+AGG 0.490212 4.4:+88033077 None:intergenic
CCTCTCAGTTCTCAAGGGTC+TGG 0.490548 4.4:-88034503 MS.gene37315:intron
CTTGGCTTACCTCCTTCAAA+TGG 0.497540 4.4:-88034559 MS.gene37315:CDS
TTCCTGCCTTGATGGTAGCA+GGG 0.499828 4.4:-88034823 MS.gene37315:CDS
GTCCATACTACCACCAAGAA+AGG 0.500820 4.4:+88035179 None:intergenic
CAGAACAATACCAATTTCAC+TGG 0.503913 4.4:-88035625 MS.gene37315:CDS
ACTAGTTGCTCCTCTAGCTT+GGG 0.506471 4.4:-88035105 MS.gene37315:CDS
GGAATTATAAGTGATATAAG+AGG 0.508073 4.4:-88037940 MS.gene37315:CDS
TAAGAGCCTCTCAGTTCTCA+AGG 0.513791 4.4:-88034509 MS.gene37315:CDS
AGCAGAAGCAAAGAAAATAT+AGG 0.515249 4.4:+88037758 None:intergenic
TGAGGAAGAACACCATTTGA+AGG 0.516885 4.4:+88034547 None:intergenic
GGCCAACCACTCCTCATTGT+AGG 0.517222 4.4:-88036639 MS.gene37315:CDS
CTGGTAATCAATTCTGGGAA+AGG 0.528888 4.4:-88033076 MS.gene37315:CDS
TCATAGCGTTGCTTCGGGGA+TGG 0.529659 4.4:-88034786 MS.gene37315:CDS
AGTCTTCTTGGAATTTCAGA+AGG 0.536248 4.4:+88035125 None:intergenic
GTAGATGATCAGAAGAAAGA+TGG 0.537686 4.4:-88033867 MS.gene37315:intron
ATTACCAGGAAGACTATCAA+TGG 0.540612 4.4:+88033091 None:intergenic
TTATGCTGCAGGACATGGGA+AGG 0.542317 4.4:-88034877 MS.gene37315:intron
TTCGGGGATGGCACAGCAGA+AGG 0.544389 4.4:-88034774 MS.gene37315:CDS
ACTTTCAGACTTCTGTGGAA+AGG 0.550041 4.4:-88033340 MS.gene37315:intron
TATTTATGCTTGAAATGGAG+TGG 0.551216 4.4:-88037981 None:intergenic
TCTTTGTATCACCTAGTAGG+TGG 0.553864 4.4:-88033043 MS.gene37315:CDS
AGCCCTGCTACCATCAAGGC+AGG 0.556589 4.4:+88034821 None:intergenic
CAATTTATGCTGCAGGACAT+GGG 0.563496 4.4:-88034881 MS.gene37315:intron
TAGGTATACATGATGATGGT+GGG 0.568391 4.4:+88036606 None:intergenic
TCGATTCAGCTGCTCACCAA+AGG 0.568516 4.4:+88037722 None:intergenic
GGTTAACTTTCAGACTTCTG+TGG 0.572038 4.4:-88033345 MS.gene37315:intron
GTAAAGCCCTGCTACCATCA+AGG 0.579565 4.4:+88034817 None:intergenic
ATCATACATTCAATTATTGG+AGG 0.587308 4.4:-88036660 MS.gene37315:CDS
TATCGTCAACAGATTTACTA+GGG 0.593342 4.4:-88035855 MS.gene37315:CDS
TATGCTGCAGGACATGGGAA+GGG 0.598343 4.4:-88034876 MS.gene37315:intron
GGAACTAGAGAACCTAAAAG+AGG 0.603100 4.4:-88033318 MS.gene37315:CDS
TGCCAACATTAAATATCGCT+AGG 0.608914 4.4:+88035879 None:intergenic
TTAGTATGCATAGGAGATTG+AGG 0.610628 4.4:+88034529 None:intergenic
AAAGATGGTTGAAAGTGCCA+AGG 0.614262 4.4:-88033852 MS.gene37315:CDS
GATGTAGATTCCCAAGCTAG+AGG 0.615069 4.4:+88035095 None:intergenic
GAGAGGCTCTTAGTATGCAT+AGG 0.616506 4.4:+88034520 None:intergenic
CGCTAGGAGAAACAGCAAGA+GGG 0.616694 4.4:+88035895 None:intergenic
AAGAGCCTCTCAGTTCTCAA+GGG 0.616777 4.4:-88034508 MS.gene37315:CDS
CAAGTAGGTATACATGATGA+TGG 0.617804 4.4:+88036602 None:intergenic
GTAGGTATACATGATGATGG+TGG 0.632071 4.4:+88036605 None:intergenic
TTACTTTGATAACTGTCCAA+TGG 0.633020 4.4:+88035066 None:intergenic
TCTTCAATGCTGTATAGAGA+AGG 0.634140 4.4:+88035561 None:intergenic
ATGTCATAATGATATGCAGA+AGG 0.635380 4.4:+88034734 None:intergenic
TTGATCATAGCGTTGCTTCG+GGG 0.645474 4.4:-88034790 MS.gene37315:CDS
ATTGAGCACAGTAGAAACAC+TGG 0.647913 4.4:-88036703 MS.gene37315:CDS
GGAAGAACACCATTTGAAGG+AGG 0.648209 4.4:+88034550 None:intergenic
TCGCTAGGAGAAACAGCAAG+AGG 0.660719 4.4:+88035894 None:intergenic
AAACTTACCCAATACCAGAA+CGG 0.665316 4.4:+88037878 None:intergenic
GAGCAGCTGAATCGAGACAC+AGG 0.681742 4.4:-88037714 MS.gene37315:intron
GCAACTCCTACAATGAGGAG+TGG 0.695067 4.4:+88036633 None:intergenic
GTTCTGCAACTCCTACAATG+AGG 0.722737 4.4:+88036628 None:intergenic
CCAGACCCTTGAGAACTGAG+AGG 0.733266 4.4:+88034503 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATTAATATAAATTAA+TGG + chr4.4:88033961-88033980 None:intergenic 0.0%
!! CAAATTCTTTATTATTATAA+TGG - chr4.4:88034499-88034518 MS.gene37315:intron 10.0%
!! GTATTAATGATTAAATTAAA+TGG - chr4.4:88037081-88037100 MS.gene37315:intron 10.0%
!!! TTATAATTTTTATAAAGCAT+AGG - chr4.4:88036535-88036554 MS.gene37315:intron 10.0%
!!! TTTTAACAATATTTAACAAA+CGG - chr4.4:88034140-88034159 MS.gene37315:intron 10.0%
!! AAAGTTTACTAAAATTATAC+AGG - chr4.4:88035308-88035327 MS.gene37315:intron 15.0%
!! AAGTTTACTAAAATTATACA+GGG - chr4.4:88035309-88035328 MS.gene37315:intron 15.0%
!! ACAAAACAAATTATAGAAAA+AGG - chr4.4:88034214-88034233 MS.gene37315:intron 15.0%
!! ACCCATAATTATTTAAAAAA+GGG - chr4.4:88037533-88037552 MS.gene37315:intron 15.0%
!! ATTGATATTATTAATTTCTC+AGG - chr4.4:88035067-88035086 MS.gene37315:intron 15.0%
!! TACATAATATGATATTATAG+TGG - chr4.4:88036610-88036629 MS.gene37315:CDS 15.0%
!! TATAATTCTAATTAAAGATG+AGG - chr4.4:88033572-88033591 MS.gene37315:intron 15.0%
!! TATTTCATCTAATTTACTAA+TGG + chr4.4:88034826-88034845 None:intergenic 15.0%
!! TTAAGCTTATAAAATAACTT+TGG + chr4.4:88033671-88033690 None:intergenic 15.0%
!! TTATTTAAAGGTTAATTCTA+CGG - chr4.4:88034569-88034588 MS.gene37315:CDS 15.0%
!! TTGATATTATTAATTTCTCA+GGG - chr4.4:88035068-88035087 MS.gene37315:intron 15.0%
!! TTTCTAATAGTATTTACAAA+GGG + chr4.4:88036335-88036354 None:intergenic 15.0%
!!! AAATATAATTTTGCTTGAAA+AGG - chr4.4:88035276-88035295 MS.gene37315:intron 15.0%
!!! TATCAACTTTTACAAAAATA+TGG - chr4.4:88036049-88036068 MS.gene37315:intron 15.0%
!!! TCCCTTTTTTAAATAATTAT+GGG + chr4.4:88037537-88037556 None:intergenic 15.0%
!!! TTCCCTTTTTTAAATAATTA+TGG + chr4.4:88037538-88037557 None:intergenic 15.0%
!! AAATCTATCAAGATGAAAAT+TGG + chr4.4:88033484-88033503 None:intergenic 20.0%
!! AACATTTGTGACTTATTTAA+AGG - chr4.4:88034557-88034576 MS.gene37315:CDS 20.0%
!! AATAAGTAACTTTAGATTGA+AGG + chr4.4:88037457-88037476 None:intergenic 20.0%
!! AATGCTTTACAAAAGATTAT+GGG + chr4.4:88036769-88036788 None:intergenic 20.0%
!! AATTAGAATTATACATCTAG+AGG + chr4.4:88033565-88033584 None:intergenic 20.0%
!! ACGGATGAAAATATTTAAAA+TGG - chr4.4:88034159-88034178 MS.gene37315:intron 20.0%
!! ATTATGAATCTCATTATTAG+TGG - chr4.4:88036363-88036382 MS.gene37315:intron 20.0%
!! CAAATAGTAAAGTTATGTAT+CGG - chr4.4:88037318-88037337 MS.gene37315:intron 20.0%
!! CACCCATAATTATTTAAAAA+AGG - chr4.4:88037532-88037551 MS.gene37315:intron 20.0%
!! CTATTTAATACAAATGTCTT+TGG - chr4.4:88035563-88035582 MS.gene37315:CDS 20.0%
!! CTTTCTAATAGTATTTACAA+AGG + chr4.4:88036336-88036355 None:intergenic 20.0%
!! TAATGCTTTACAAAAGATTA+TGG + chr4.4:88036770-88036789 None:intergenic 20.0%
!! TTTGAAAAAAGATCTTAGTT+TGG - chr4.4:88036568-88036587 MS.gene37315:CDS 20.0%
!!! AGTTGTTAAAAGTATATATG+AGG - chr4.4:88035729-88035748 MS.gene37315:intron 20.0%
!!! ATTATGATAAATTTGAGTTG+AGG - chr4.4:88035503-88035522 MS.gene37315:intron 20.0%
!!! TTAGTTTCTTTTGCTATTAA+GGG - chr4.4:88033885-88033904 MS.gene37315:intron 20.0%
!!! TTCAATCTAAAGTTACTTAT+TGG - chr4.4:88037456-88037475 MS.gene37315:intron 20.0%
!!! TTGTTTATTTTGTTCATAGA+TGG - chr4.4:88034272-88034291 MS.gene37315:intron 20.0%
!!! TTTAGTTTCTTTTGCTATTA+AGG - chr4.4:88033884-88033903 MS.gene37315:intron 20.0%
! AAAGCAGCAAAAATATATGT+TGG + chr4.4:88036156-88036175 None:intergenic 25.0%
! AAATAAAACGCTCTACATAT+GGG + chr4.4:88034930-88034949 None:intergenic 25.0%
! AACAAAGCAAAAGAAACTAA+AGG + chr4.4:88033850-88033869 None:intergenic 25.0%
! AACTGCAACAAATATAACTT+AGG + chr4.4:88036082-88036101 None:intergenic 25.0%
! AACTTTGCTAAAAATAAGGA+TGG - chr4.4:88034425-88034444 MS.gene37315:intron 25.0%
! AATTCTAATTAAAGATGAGG+TGG - chr4.4:88033575-88033594 MS.gene37315:intron 25.0%
! ACTATTATAAGACTTACAAC+TGG + chr4.4:88037252-88037271 None:intergenic 25.0%
! ACTGCAACAAATATAACTTA+GGG + chr4.4:88036081-88036100 None:intergenic 25.0%
! ATCATACATTCAATTATTGG+AGG - chr4.4:88034341-88034360 MS.gene37315:intron 25.0%
! ATGGAGAAATTAGATAAAAG+AGG - chr4.4:88035997-88036016 MS.gene37315:intron 25.0%
! CACAATGTTATAAAGATGAT+TGG - chr4.4:88033089-88033108 MS.gene37315:CDS 25.0%
! CATTATGACATATTCTTACT+AGG - chr4.4:88036279-88036298 MS.gene37315:intron 25.0%
! CTAAAACTTTAGATTGAAGA+CGG + chr4.4:88037608-88037627 None:intergenic 25.0%
! CTAGGTATTATATTCACATT+TGG - chr4.4:88035417-88035436 MS.gene37315:intron 25.0%
! CTATTATAAGACTTACAACT+GGG + chr4.4:88037251-88037270 None:intergenic 25.0%
! GGAATCATACATTCAATTAT+TGG - chr4.4:88034338-88034357 MS.gene37315:intron 25.0%
! GGAATTATAAGTGATATAAG+AGG - chr4.4:88033061-88033080 MS.gene37315:CDS 25.0%
! GTACAACTTTGCTAAAAATA+AGG - chr4.4:88034421-88034440 MS.gene37315:intron 25.0%
! TAAGTTAGATTATCCAAACA+AGG + chr4.4:88035978-88035997 None:intergenic 25.0%
! TCACTTATAATTCCCTTAAA+AGG + chr4.4:88033055-88033074 None:intergenic 25.0%
! TCTAACATGTACAAACAAAA+TGG + chr4.4:88034902-88034921 None:intergenic 25.0%
! TGAGGAATATTTATATGACA+TGG - chr4.4:88035747-88035766 MS.gene37315:intron 25.0%
! TGGTGAAAATCAGTATATAT+AGG + chr4.4:88034619-88034638 None:intergenic 25.0%
! TGTTTGGATAATCTAACTTA+TGG - chr4.4:88035978-88035997 MS.gene37315:intron 25.0%
! TTAAATAATTATGGGTGATG+TGG + chr4.4:88037529-88037548 None:intergenic 25.0%
!! CAAAACAAGTTGTTGTTATT+TGG + chr4.4:88034086-88034105 None:intergenic 25.0%
!! TAAATGGGATACTTTTGATA+AGG - chr4.4:88037097-88037116 MS.gene37315:intron 25.0%
!! TGGTTAAAATCACCTTTTAA+GGG - chr4.4:88033040-88033059 MS.gene37315:CDS 25.0%
!!! AAAAACCTAATGCTTTGTTT+TGG - chr4.4:88036387-88036406 MS.gene37315:intron 25.0%
!!! GAAGTTGAGTTTTCATTTTT+AGG + chr4.4:88035357-88035376 None:intergenic 25.0%
!!! TATAAGTATTGCATTTTGCA+CGG - chr4.4:88036722-88036741 MS.gene37315:intron 25.0%
!!! TATGACATGGTCTTATTTAT+TGG - chr4.4:88035760-88035779 MS.gene37315:intron 25.0%
!!! TTTCTTTTTTATGCTTTCCT+TGG + chr4.4:88037169-88037188 None:intergenic 25.0%
!!! TTTTGTTGATGATAGGATAT+TGG - chr4.4:88033211-88033230 MS.gene37315:CDS 25.0%
!!! TTTTTTTTTTTGCGCAAACT+AGG - chr4.4:88033343-88033362 MS.gene37315:intron 25.0%
AAATCGTGATTGAAAGGTTA+TGG + chr4.4:88034800-88034819 None:intergenic 30.0%
AATCGTGATTGAAAGGTTAT+GGG + chr4.4:88034799-88034818 None:intergenic 30.0%
AATCTACATCTTTACACCAT+TGG - chr4.4:88035919-88035938 MS.gene37315:intron 30.0%
ACAACATAATGCAACTATGA+TGG + chr4.4:88036831-88036850 None:intergenic 30.0%
ACAGTCTCTTGTATAAAAAC+AGG + chr4.4:88034762-88034781 None:intergenic 30.0%
AGCAGAAGCAAAGAAAATAT+AGG + chr4.4:88033246-88033265 None:intergenic 30.0%
ATATCGTCAACAGATTTACT+AGG - chr4.4:88035145-88035164 MS.gene37315:CDS 30.0%
ATATGAACACAAACACGATA+CGG + chr4.4:88035698-88035717 None:intergenic 30.0%
ATCCTAAAAGGTGAAGATAA+AGG - chr4.4:88037708-88037727 MS.gene37315:intron 30.0%
ATGTCATAATGATATGCAGA+AGG + chr4.4:88036270-88036289 None:intergenic 30.0%
CAAATAAAACGCTCTACATA+TGG + chr4.4:88034931-88034950 None:intergenic 30.0%
CAGTCTCTTGTATAAAAACA+GGG + chr4.4:88034761-88034780 None:intergenic 30.0%
CATATTCTTACTAGGATTTG+TGG - chr4.4:88036287-88036306 MS.gene37315:intron 30.0%
CTAAAAGAGGTAATCCTAAA+AGG - chr4.4:88037696-88037715 MS.gene37315:intron 30.0%
CTTTATGTGAATGGTTTACT+AGG - chr4.4:88035399-88035418 MS.gene37315:intron 30.0%
GCAAAGAAAATATAGGTAGT+TGG + chr4.4:88033239-88033258 None:intergenic 30.0%
GTGAAAAAGATATATGTGCA+TGG - chr4.4:88034869-88034888 MS.gene37315:CDS 30.0%
TATCGTCAACAGATTTACTA+GGG - chr4.4:88035146-88035165 MS.gene37315:CDS 30.0%
TCTATCAAGATGAAAATTGG+TGG + chr4.4:88033481-88033500 None:intergenic 30.0%
TCTGAAAGTTAACCATGTTT+GGG + chr4.4:88037650-88037669 None:intergenic 30.0%
TCTTGTATAAAAACAGGGTA+AGG + chr4.4:88034756-88034775 None:intergenic 30.0%
TGAATGTATGATTCCACAAA+TGG + chr4.4:88034333-88034352 None:intergenic 30.0%
TTAAGTGCTTATAACACAAG+AGG - chr4.4:88034995-88035014 MS.gene37315:intron 30.0%
TTATAGAAAAGATGCGAGTT+TGG - chr4.4:88036799-88036818 MS.gene37315:intron 30.0%
TTCTTCTTCTTCTTGTTCTT+TGG - chr4.4:88033313-88033332 MS.gene37315:CDS 30.0%
TTTAGCAAAGTTGTACAAGT+AGG + chr4.4:88034417-88034436 None:intergenic 30.0%
TTTATACAAGAGACTGTTTC+CGG - chr4.4:88034765-88034784 MS.gene37315:CDS 30.0%
! AAATTCCAACTTCTGTTTTG+TGG - chr4.4:88037868-88037887 MS.gene37315:intron 30.0%
! AATTCCAACTTCTGTTTTGT+GGG - chr4.4:88037869-88037888 MS.gene37315:intron 30.0%
! AATTTTCTTAATGACAGGCA+TGG + chr4.4:88037853-88037872 None:intergenic 30.0%
! AGTTATATTTGTTGCAGTTG+TGG - chr4.4:88036083-88036102 MS.gene37315:intron 30.0%
! CTTATGAAGAGTTTGTTTGA+GGG + chr4.4:88033401-88033420 None:intergenic 30.0%
! CTTTTACAATCACTCTTTGT+TGG - chr4.4:88037813-88037832 MS.gene37315:intron 30.0%
! GAGATTCTGAAAATTTGAGA+TGG - chr4.4:88033705-88033724 MS.gene37315:intron 30.0%
! GTGGTTAAAATCACCTTTTA+AGG - chr4.4:88033039-88033058 MS.gene37315:CDS 30.0%
! GTTATATTTGTTGCAGTTGT+GGG - chr4.4:88036084-88036103 MS.gene37315:intron 30.0%
! GTTGGAATTTTCTTAATGAC+AGG + chr4.4:88037858-88037877 None:intergenic 30.0%
! TCTTATGAAGAGTTTGTTTG+AGG + chr4.4:88033402-88033421 None:intergenic 30.0%
! TTACTTTGATAACTGTCCAA+TGG + chr4.4:88035938-88035957 None:intergenic 30.0%
! TTATATTTGTTGCAGTTGTG+GGG - chr4.4:88036085-88036104 MS.gene37315:intron 30.0%
! TTTGTAAAGCATTAGAGAGA+AGG - chr4.4:88036776-88036795 MS.gene37315:intron 30.0%
!! AATACATGAGGTTTGTTACA+TGG + chr4.4:88036895-88036914 None:intergenic 30.0%
!! CATAACGGGTAAAATACTAA+TGG + chr4.4:88034639-88034658 None:intergenic 30.0%
!! CATGGTCTTATTTATTGGAT+AGG - chr4.4:88035765-88035784 MS.gene37315:intron 30.0%
!! GTCTTATTTATTGGATAGGT+TGG - chr4.4:88035769-88035788 MS.gene37315:intron 30.0%
!! TAGCTTATTTTTCCCAAACA+TGG - chr4.4:88037635-88037654 MS.gene37315:intron 30.0%
!!! ACAAGAACTTTTTTTGGCTT+GGG - chr4.4:88034454-88034473 MS.gene37315:intron 30.0%
!!! ATTTCAGAAGGTATTTTGCT+TGG + chr4.4:88035867-88035886 None:intergenic 30.0%
!!! CTTTTAGGATTACCTCTTTT+AGG + chr4.4:88037698-88037717 None:intergenic 30.0%
AAACTTACCCAATACCAGAA+CGG + chr4.4:88033126-88033145 None:intergenic 35.0%
AATTTCTCAGGGTTTGTGTA+TGG - chr4.4:88035079-88035098 MS.gene37315:CDS 35.0%
ACACAACACTAACACACTAT+CGG - chr4.4:88037366-88037385 MS.gene37315:intron 35.0%
AGAGCAAGATCTTGGTTATA+TGG - chr4.4:88035468-88035487 MS.gene37315:intron 35.0%
AGTCTTCTTGGAATTTCAGA+AGG + chr4.4:88035879-88035898 None:intergenic 35.0%
ATATGTGGTGGTCCAAAAAT+TGG + chr4.4:88033519-88033538 None:intergenic 35.0%
ATGCTAAGGTTATCCCTAAA+AGG - chr4.4:88034656-88034675 MS.gene37315:intron 35.0%
ATTACCAGGAAGACTATCAA+TGG + chr4.4:88037913-88037932 None:intergenic 35.0%
CAAGTAGGTATACATGATGA+TGG + chr4.4:88034402-88034421 None:intergenic 35.0%
CACTTATCAGAGAATACATG+AGG + chr4.4:88036907-88036926 None:intergenic 35.0%
CAGAACAATACCAATTTCAC+TGG - chr4.4:88035376-88035395 MS.gene37315:intron 35.0%
CTCATGTATTCTCTGATAAG+TGG - chr4.4:88036905-88036924 MS.gene37315:intron 35.0%
CTCCTAGCGATATTTAATGT+TGG - chr4.4:88035120-88035139 MS.gene37315:CDS 35.0%
CTTTGCTCATTTACTCTAAC+AGG + chr4.4:88037783-88037802 None:intergenic 35.0%
GAGCAAGATCTTGGTTATAT+GGG - chr4.4:88035469-88035488 MS.gene37315:intron 35.0%
GCTAAAAATAAGGATGGCTT+GGG - chr4.4:88034431-88034450 MS.gene37315:intron 35.0%
GTAGATGATCAGAAGAAAGA+TGG - chr4.4:88037134-88037153 MS.gene37315:intron 35.0%
GTCTGAAAGTTAACCATGTT+TGG + chr4.4:88037651-88037670 None:intergenic 35.0%
TAGGGATAACCTTAGCATAA+CGG + chr4.4:88034654-88034673 None:intergenic 35.0%
TCACATAAAGCCAGTGAAAT+TGG + chr4.4:88035389-88035408 None:intergenic 35.0%
TCTTCAATGCTGTATAGAGA+AGG + chr4.4:88035443-88035462 None:intergenic 35.0%
TCTTCCTGGTAATCAATTCT+GGG - chr4.4:88037920-88037939 MS.gene37315:CDS 35.0%
TGCCAACATTAAATATCGCT+AGG + chr4.4:88035125-88035144 None:intergenic 35.0%
TGCTAAAAATAAGGATGGCT+TGG - chr4.4:88034430-88034449 MS.gene37315:intron 35.0%
TGGTGAAAATCGTGATTGAA+AGG + chr4.4:88034806-88034825 None:intergenic 35.0%
TTAGTATGCATAGGAGATTG+AGG + chr4.4:88036475-88036494 None:intergenic 35.0%
TTATACAAGAGACTGTTTCC+GGG - chr4.4:88034766-88034785 MS.gene37315:CDS 35.0%
TTCTCTTTGTATCACCTAGT+AGG - chr4.4:88037955-88037974 MS.gene37315:CDS 35.0%
TTGACTTCAATTTATGCTGC+AGG - chr4.4:88036113-88036132 MS.gene37315:intron 35.0%
! AGCGTCTATTTTCACTATGT+GGG + chr4.4:88036657-88036676 None:intergenic 35.0%
! ATTCCAACTTCTGTTTTGTG+GGG - chr4.4:88037870-88037889 MS.gene37315:intron 35.0%
! CTCCTTTATCTTCACCTTTT+AGG + chr4.4:88037713-88037732 None:intergenic 35.0%
! CTGAAAATTTGAGATGGAGA+AGG - chr4.4:88033711-88033730 MS.gene37315:intron 35.0%
! GATGTTTGACCACCAATTTT+TGG - chr4.4:88033469-88033488 MS.gene37315:intron 35.0%
! GTATTTTACCCGTTATGCTA+AGG - chr4.4:88034642-88034661 MS.gene37315:intron 35.0%
! GTTTGCCAAAACAAAGCATT+AGG + chr4.4:88036395-88036414 None:intergenic 35.0%
!! ACGTTACAGACTTTGATTTG+TGG - chr4.4:88036415-88036434 MS.gene37315:intron 35.0%
!! ACTTTGATTTGTGGACTACT+TGG - chr4.4:88036424-88036443 MS.gene37315:intron 35.0%
!! AGAAGCTTTATTGCAGACTA+TGG - chr4.4:88035795-88035814 MS.gene37315:intron 35.0%
!! TAGGTATACATGATGATGGT+GGG + chr4.4:88034398-88034417 None:intergenic 35.0%
!! TGTGAGAATTTAGCTTGATG+TGG + chr4.4:88033617-88033636 None:intergenic 35.0%
!! TGTTGAACTAAAGCCTTGTT+TGG - chr4.4:88035962-88035981 MS.gene37315:intron 35.0%
!! TTCAGTCTTGTTCATTCAAG+AGG - chr4.4:88035197-88035216 MS.gene37315:CDS 35.0%
!! TTTCACTGGCTTTATGTGAA+TGG - chr4.4:88035390-88035409 MS.gene37315:intron 35.0%
!!! CTTGCACTTTTGTTGATGAT+AGG - chr4.4:88033204-88033223 MS.gene37315:CDS 35.0%
!!! CTTGGGACAAGAACTTTTTT+TGG - chr4.4:88034448-88034467 MS.gene37315:intron 35.0%
!!! GACAAGAACTTTTTTTGGCT+TGG - chr4.4:88034453-88034472 MS.gene37315:intron 35.0%
ACTATGTGGGATCAGTTACA+TGG + chr4.4:88036644-88036663 None:intergenic 40.0%
ACTTTCAGACTTCTGTGGAA+AGG - chr4.4:88037661-88037680 MS.gene37315:intron 40.0%
AGATCTTGGTTATATGGGAC+AGG - chr4.4:88035474-88035493 MS.gene37315:intron 40.0%
AGGGATAACCTTAGCATAAC+GGG + chr4.4:88034653-88034672 None:intergenic 40.0%
ATTCTCTGATAAGTGGACAG+CGG - chr4.4:88036912-88036931 MS.gene37315:intron 40.0%
ATTGAGCACAGTAGAAACAC+TGG - chr4.4:88034298-88034317 MS.gene37315:intron 40.0%
CAATTTATGCTGCAGGACAT+GGG - chr4.4:88036120-88036139 MS.gene37315:intron 40.0%
CATCTAGAGGTGAAGTGTAT+TGG + chr4.4:88033552-88033571 None:intergenic 40.0%
CTTTCAGACTTCTGTGGAAA+GGG - chr4.4:88037662-88037681 MS.gene37315:intron 40.0%
CTTTCCCAGAATTGATTACC+AGG + chr4.4:88037927-88037946 None:intergenic 40.0%
CTTTGATCATAGCGTTGCTT+CGG - chr4.4:88036209-88036228 MS.gene37315:intron 40.0%
GCAAGCAGTGTTTGTAGAAA+TGG - chr4.4:88037218-88037237 MS.gene37315:intron 40.0%
GCACGGTAGAAAACTTTAGA+GGG - chr4.4:88036739-88036758 MS.gene37315:intron 40.0%
GCTTTACCTGTTATTGCCTT+TGG - chr4.4:88033263-88033282 MS.gene37315:CDS 40.0%
GGAACTAGAGAACCTAAAAG+AGG - chr4.4:88037683-88037702 MS.gene37315:intron 40.0%
GGTTAACTTTCAGACTTCTG+TGG - chr4.4:88037656-88037675 MS.gene37315:intron 40.0%
GTCTTCCTGGTAATCAATTC+TGG - chr4.4:88037919-88037938 MS.gene37315:CDS 40.0%
GTTCATTCAAGAGGCCATTA+AGG - chr4.4:88035206-88035225 MS.gene37315:CDS 40.0%
TATCCCCACAAAACAGAAGT+TGG + chr4.4:88037876-88037895 None:intergenic 40.0%
TCAATTTATGCTGCAGGACA+TGG - chr4.4:88036119-88036138 MS.gene37315:intron 40.0%
TCTTTGTATCACCTAGTAGG+TGG - chr4.4:88037958-88037977 MS.gene37315:CDS 40.0%
TGAGGAAGAACACCATTTGA+AGG + chr4.4:88036457-88036476 None:intergenic 40.0%
TGCACGGTAGAAAACTTTAG+AGG - chr4.4:88036738-88036757 MS.gene37315:intron 40.0%
TTTGATCATAGCGTTGCTTC+GGG - chr4.4:88036210-88036229 MS.gene37315:intron 40.0%
! AGGGTTGCTGAAGAACTTTT+TGG - chr4.4:88035165-88035184 MS.gene37315:CDS 40.0%
! ATTGGTGGTCAAACATCTAG+AGG + chr4.4:88033466-88033485 None:intergenic 40.0%
! CAGCGTCTATTTTCACTATG+TGG + chr4.4:88036658-88036677 None:intergenic 40.0%
! CTGGTAATCAATTCTGGGAA+AGG - chr4.4:88037925-88037944 MS.gene37315:CDS 40.0%
! TAGAGGTGAAGTGTATTGGT+GGG + chr4.4:88033548-88033567 None:intergenic 40.0%
! TGCACTGAGTTGTCCTTTTA+GGG + chr4.4:88034672-88034691 None:intergenic 40.0%
! TGCTTTTATTCCTGCCTTGA+TGG - chr4.4:88036170-88036189 MS.gene37315:intron 40.0%
!! AAAGATGGTTGAAAGTGCCA+AGG - chr4.4:88037149-88037168 MS.gene37315:intron 40.0%
!! CACATACTGACTCACCTTAA+TGG + chr4.4:88035223-88035242 None:intergenic 40.0%
!! GCTAGCAACTCTGAAATCTA+TGG - chr4.4:88037189-88037208 MS.gene37315:intron 40.0%
!! GTAGGTATACATGATGATGG+TGG + chr4.4:88034399-88034418 None:intergenic 40.0%
AAACAGGGTAAGGCTGCATA+TGG + chr4.4:88034746-88034765 None:intergenic 45.0%
AACTCCGCATATGCAGGATT+CGG - chr4.4:88034696-88034715 MS.gene37315:intron 45.0%
AAGAGCCTCTCAGTTCTCAA+GGG - chr4.4:88036493-88036512 MS.gene37315:intron 45.0%
AAGGTTATGGGTTCAAGTCC+CGG + chr4.4:88034787-88034806 None:intergenic 45.0%
AATTATGGGTGATGTGGCAG+TGG + chr4.4:88037523-88037542 None:intergenic 45.0%
ACACACACACCACACATACA+CGG - chr4.4:88037492-88037511 MS.gene37315:intron 45.0%
AGACTATGGTGTGCCTTTCT+TGG - chr4.4:88035809-88035828 MS.gene37315:CDS 45.0%
AGAGCAGAAGAGCAAGATCT+TGG - chr4.4:88035460-88035479 MS.gene37315:intron 45.0%
CAACACGACACTAACACATG+TGG + chr4.4:88037575-88037594 None:intergenic 45.0%
CACATGTGTTAGTGTCGTGT+TGG - chr4.4:88037573-88037592 MS.gene37315:intron 45.0%
CACTAAAACTCCGCATATGC+AGG - chr4.4:88034690-88034709 MS.gene37315:intron 45.0%
CATATGCAGGATTCGGAAAG+GGG - chr4.4:88034703-88034722 MS.gene37315:intron 45.0%
CATGCGTCAATATGCTTCTC+AGG + chr4.4:88037756-88037775 None:intergenic 45.0%
CTAGAGGTGAAGTGTATTGG+TGG + chr4.4:88033549-88033568 None:intergenic 45.0%
CTTGGCTTACCTCCTTCAAA+TGG - chr4.4:88036442-88036461 MS.gene37315:intron 45.0%
CTTTCCGAATCCTGCATATG+CGG + chr4.4:88034703-88034722 None:intergenic 45.0%
GAGAGGCTCTTAGTATGCAT+AGG + chr4.4:88036484-88036503 None:intergenic 45.0%
GATGTAGATTCCCAAGCTAG+AGG + chr4.4:88035909-88035928 None:intergenic 45.0%
GCATATGCAGGATTCGGAAA+GGG - chr4.4:88034702-88034721 MS.gene37315:intron 45.0%
GGAAGAACACCATTTGAAGG+AGG + chr4.4:88036454-88036473 None:intergenic 45.0%
GTCCATACTACCACCAAGAA+AGG + chr4.4:88035825-88035844 None:intergenic 45.0%
GTGCTTTCCGTTCTGGTATT+GGG - chr4.4:88033116-88033135 MS.gene37315:CDS 45.0%
GTGGGGATACTTTGCATACA+TGG - chr4.4:88037887-88037906 MS.gene37315:CDS 45.0%
GTTCTGCAACTCCTACAATG+AGG + chr4.4:88034376-88034395 None:intergenic 45.0%
TAAGAGCCTCTCAGTTCTCA+AGG - chr4.4:88036492-88036511 MS.gene37315:intron 45.0%
TGCTCACCAAAGGCAATAAC+AGG + chr4.4:88033272-88033291 None:intergenic 45.0%
TGTCAACGTCTCTTTCAGAC+CGG + chr4.4:88037008-88037027 None:intergenic 45.0%
TGTGCTTTCCGTTCTGGTAT+TGG - chr4.4:88033115-88033134 MS.gene37315:CDS 45.0%
TGTGGTGGTCCAAAAATTGG+TGG + chr4.4:88033516-88033535 None:intergenic 45.0%
TTGATCATAGCGTTGCTTCG+GGG - chr4.4:88036211-88036230 MS.gene37315:intron 45.0%
! ACTAGTTGCTCCTCTAGCTT+GGG - chr4.4:88035896-88035915 MS.gene37315:CDS 45.0%
! ATGGCCATTGATAGTCTTCC+TGG - chr4.4:88037906-88037925 MS.gene37315:CDS 45.0%
! GTGCACTGAGTTGTCCTTTT+AGG + chr4.4:88034673-88034692 None:intergenic 45.0%
! TGCCTTTCTTGGTGGTAGTA+TGG - chr4.4:88035820-88035839 MS.gene37315:CDS 45.0%
!! AGAGGAGCAACTAGTCTTCT+TGG + chr4.4:88035891-88035910 None:intergenic 45.0%
!! ATTGGTGGGCTAGACATATG+TGG + chr4.4:88033534-88033553 None:intergenic 45.0%
!!! GAACTTTTTTTGGCTTGGGC+TGG - chr4.4:88034458-88034477 MS.gene37315:intron 45.0%
!!! TTTTTTTGGCTTGGGCTGGA+TGG - chr4.4:88034462-88034481 MS.gene37315:intron 45.0%
!! TATTAATGATTAAATTAAAT+GGG - chr4.4:88037082-88037101 MS.gene37315:intron 5.0%
!!! AAAACTTTTTTTAAATATTA+CGG + chr4.4:88036690-88036709 None:intergenic 5.0%
ATCATTATCCACCCTGCTGC+CGG - chr4.4:88036986-88037005 MS.gene37315:intron 50.0%
CGCATATGCAGGATTCGGAA+AGG - chr4.4:88034701-88034720 MS.gene37315:intron 50.0%
CGCTAGGAGAAACAGCAAGA+GGG + chr4.4:88035109-88035128 None:intergenic 50.0%
CTATGGTGTGCCTTTCTTGG+TGG - chr4.4:88035812-88035831 MS.gene37315:CDS 50.0%
CTCCTACAATGAGGAGTGGT+TGG + chr4.4:88034367-88034386 None:intergenic 50.0%
CTGGCTTCTACAGCCATTTG+TGG - chr4.4:88034317-88034336 MS.gene37315:intron 50.0%
GCAACTCCTACAATGAGGAG+TGG + chr4.4:88034371-88034390 None:intergenic 50.0%
GTAAAGCCCTGCTACCATCA+AGG + chr4.4:88036187-88036206 None:intergenic 50.0%
TATGCTGCAGGACATGGGAA+GGG - chr4.4:88036125-88036144 MS.gene37315:intron 50.0%
TCAGTTCTCAAGGGTCTGGT+AGG - chr4.4:88036502-88036521 MS.gene37315:intron 50.0%
TCGAGTGCAGCAACATGTGT+CGG - chr4.4:88037413-88037432 MS.gene37315:intron 50.0%
TCGATTCAGCTGCTCACCAA+AGG + chr4.4:88033282-88033301 None:intergenic 50.0%
TCGCTAGGAGAAACAGCAAG+AGG + chr4.4:88035110-88035129 None:intergenic 50.0%
TGGACTTGTGCTTTCCGTTC+TGG - chr4.4:88033109-88033128 MS.gene37315:CDS 50.0%
TTAGTCTCCACAGTTACGCG+CGG + chr4.4:88033377-88033396 None:intergenic 50.0%
TTATGCTGCAGGACATGGGA+AGG - chr4.4:88036124-88036143 MS.gene37315:intron 50.0%
! ATTCCTGCCTTGATGGTAGC+AGG - chr4.4:88036177-88036196 MS.gene37315:intron 50.0%
! GACTAGTTGCTCCTCTAGCT+TGG - chr4.4:88035895-88035914 MS.gene37315:CDS 50.0%
! TTCCTGCCTTGATGGTAGCA+GGG - chr4.4:88036178-88036197 MS.gene37315:intron 50.0%
ATCATCTCCGCGCGTAACTG+TGG - chr4.4:88033367-88033386 MS.gene37315:intron 55.0%
CCAGACCCTTGAGAACTGAG+AGG + chr4.4:88036501-88036520 None:intergenic 55.0%
CCTCTCAGTTCTCAAGGGTC+TGG - chr4.4:88036498-88036517 MS.gene37315:intron 55.0%
GAGCAGCTGAATCGAGACAC+AGG - chr4.4:88033287-88033306 MS.gene37315:CDS 55.0%
GGCCAACCACTCCTCATTGT+AGG - chr4.4:88034362-88034381 MS.gene37315:intron 55.0%
GTGGTTGTGCCGTGTATGTG+TGG + chr4.4:88037504-88037523 None:intergenic 55.0%
TCATAGCGTTGCTTCGGGGA+TGG - chr4.4:88036215-88036234 MS.gene37315:intron 55.0%
TCTCTTTCAGACCGGCAGCA+GGG + chr4.4:88037000-88037019 None:intergenic 55.0%
!! GGTGGGCTAGACATATGTGG+TGG + chr4.4:88033531-88033550 None:intergenic 55.0%
AGCCCTGCTACCATCAAGGC+AGG + chr4.4:88036183-88036202 None:intergenic 60.0%
GTCTCTTTCAGACCGGCAGC+AGG + chr4.4:88037001-88037020 None:intergenic 60.0%
TTCGGGGATGGCACAGCAGA+AGG - chr4.4:88036227-88036246 MS.gene37315:intron 60.0%
CTTTCAGACCGGCAGCAGGG+TGG + chr4.4:88036997-88037016 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 88033034 88037989 88033034 ID=MS.gene37315
chr4.4 mRNA 88033034 88037989 88033034 ID=MS.gene37315.t1;Parent=MS.gene37315
chr4.4 exon 88037886 88037989 88037886 ID=MS.gene37315.t1.exon1;Parent=MS.gene37315.t1
chr4.4 CDS 88037886 88037989 88037886 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88037715 88037797 88037715 ID=MS.gene37315.t1.exon2;Parent=MS.gene37315.t1
chr4.4 CDS 88037715 88037797 88037715 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88036540 88036732 88036540 ID=MS.gene37315.t1.exon3;Parent=MS.gene37315.t1
chr4.4 CDS 88036540 88036732 88036540 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88035796 88035934 88035796 ID=MS.gene37315.t1.exon4;Parent=MS.gene37315.t1
chr4.4 CDS 88035796 88035934 88035796 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88035528 88035693 88035528 ID=MS.gene37315.t1.exon5;Parent=MS.gene37315.t1
chr4.4 CDS 88035528 88035693 88035528 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88035070 88035236 88035070 ID=MS.gene37315.t1.exon6;Parent=MS.gene37315.t1
chr4.4 CDS 88035070 88035236 88035070 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88034715 88034888 88034715 ID=MS.gene37315.t1.exon7;Parent=MS.gene37315.t1
chr4.4 CDS 88034715 88034888 88034715 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88034504 88034599 88034504 ID=MS.gene37315.t1.exon8;Parent=MS.gene37315.t1
chr4.4 CDS 88034504 88034599 88034504 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88033769 88033885 88033769 ID=MS.gene37315.t1.exon9;Parent=MS.gene37315.t1
chr4.4 CDS 88033769 88033885 88033769 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
chr4.4 exon 88033034 88033354 88033034 ID=MS.gene37315.t1.exon10;Parent=MS.gene37315.t1
chr4.4 CDS 88033034 88033354 88033034 ID=cds.MS.gene37315.t1;Parent=MS.gene37315.t1
Gene Sequence

>MS.gene37315

ATGGAGTGGTTAAAATCACCTTTTAAGGGAATTATAAGTGATATAAGAGGAAGAGCACAATGTTATAAAGATGATTGGACTTGTGCTTTCCGTTCTGGTATTGGGTAAGTTTCTATAAATCTTATGTAACATGTTTCTTCAAATTTAAATCTATGTATGTTTGATATGAACTTGCACTTTTGTTGATGATAGGATATTGGCTCCAACTACCTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCCTTTGGTGAGCAGCTGAATCGAGACACAGGTACTTCTTCTTCTTCTTGTTCTTTGGTTTTTTTTTTTTTTTTTTGCGCAAACTAGGTATCATCTCCGCGCGTAACTGTGGAGACTAATCCCTCAAACAAACTCTTCATAAGAGTTTTAACACTGCTGCATCTCTTGATCTTCTTCTTGTTCTTCCTCTAGATGTTTGACCACCAATTTTCATCTTGATAGATTTGATGTTTGACCACCAATTTTTGGACCACCACATATGTCTAGCCCACCAATACACTTCACCTCTAGATGTATAATTCTAATTAAAGATGAGGTGGTATGTTGAATTTCATTCCACATCAAGCTAAATTCTCACACTAAAATTTTGCAATTGAAAGTTTTTTAAGTCCAAAGTTATTTTATAAGCTTAAAAATATTATAAAGAGAGATTCTGAAAATTTGAGATGGAGAAGGTAATTTTGATTTATAGCAAGATCTGTTCTTTAAAATAACATTGAAAAAAAATTAATATTTATTTTAAATATTTTCTTGAGAAATTTCTCAAACTTGACTAATAGAACACAATACCTTTAGTTTCTTTTGCTTTGTTTTTTTTCAAAGATCTTTAGTTTCTTTTGCTATTAAGGGCTACTTGTTACGAATTATAAAAAAAAAAAAAAAAAAAATTATTTTGATATCCATTAATTTATATTAATTTTTACAGATTTTTTATAAAGCAAAATTTGTTTTGTGTTTTTATATGATGATGAATTATTATTTTTTTAGAAAAATAAAATCAAGTATCATTTTTTTAGAAAAGCTACCAAATAACAACAACTTGTTTTGATCAGTTTTTAGATTTTTTTTTAGATGTTCAATTTTTTAACAATATTTAACAAACGGATGAAAATATTTAAAATGGTTATTTTATTTAAGAAACTGATTTTTTTTTTCACAAAACAAATTATAGAAAAAGGATATAATATTTGCTTCTTATGCTAAAGCTATTTTTTTGTTTATTTTGTTCATAGATGGAAGATTGAGCACAGTAGAAACACTGGCTTCTACAGCCATTTGTGGAATCATACATTCAATTATTGGAGGCCAACCACTCCTCATTGTAGGAGTTGCAGAACCCACCATCATCATGTATACCTACTTGTACAACTTTGCTAAAAATAAGGATGGCTTGGGACAAGAACTTTTTTTGGCTTGGGCTGGATGGTAACAAAATAAAGACAAATTCTTTATTATTATAATGGCGTTGTAGTATTCACAATACTATAAACTATTAATAAACATTTGTGACTTATTTAAAGGTTAATTCTACGGTGTACAAGTGAAAAAGTCTTGCATCCTATATATACTGATTTTCACCATTAGTATTTTACCCGTTATGCTAAGGTTATCCCTAAAAGGACAACTCAGTGCACTAAAACTCCGCATATGCAGGATTCGGAAAGGGGTCTCATCATTTAGTGTACCATATGCAGCCTTACCCTGTTTTTATACAAGAGACTGTTTCCGGGACTTGAACCCATAACCTTTCAATCACGATTTTCACCATTAGTAAATTAGATGAAATATGATGTGACGTTTTAATCTAACAGTGAAAAAGATATATGTGCATGGAGCAAAACCATTTTGTTTGTACATGTTAGACAAAACCCATATGTAGAGCGTTTTATTTGATTTTTCTTTTTTTTTTTTTTTTGAAGTGTCTTATTTGAACTTATTAAGTGCTTATAACACAAGAGGTTATCATATAAATACTGTATCTATAATTATTTCTATAACATAAACTGTAATTGATATTATTAATTTCTCAGGGTTTGTGTATGGACTTCCCTCTTGCTGTTTCTCCTAGCGATATTTAATGTTGGCAATATCGTCAACAGATTTACTAGGGTTGCTGAAGAACTTTTTGGCATGTTGATTTCAGTCTTGTTCATTCAAGAGGCCATTAAGGTGAGTCAGTATGTGACTGAAATCTATCTCAACTGAAGATAAAAATTAAAATATAATTTTGCTTGAAAAGGATTCTAATAAAAGTTTACTAAAATTATACAGGGAATAATAAAAGAGTTTAGTGTTCCTAAAAATGAAAACTCAACTTCAGAACAATACCAATTTCACTGGCTTTATGTGAATGGTTTACTAGGTATTATATTCACATTTGGCCTTCTCTATACAGCATTGAAGAGCAGAAGAGCAAGATCTTGGTTATATGGGACAGGTTTGTCATTATGATAAATTTGAGTTGAGGCATAATTGATACTTCTTGAATTCATATGTTTGTTAAGCTATTTAATACAAATGTCTTTGGTGTCTGACACGTGTAAATGTCTGACATTGATACGATACTGAAACGTGTAACTATATTCAATCACTTCTACTTTTTTTTATAATATTATTTGTATTTATATGTTCAGTGTCCGTATCGTGTTTGTGTTCATATCAGTGTGTCATAGTTGTTAAAAGTATATATGAGGAATATTTATATGACATGGTCTTATTTATTGGATAGGTTGGTTGAGAAGCTTTATTGCAGACTATGGTGTGCCTTTCTTGGTGGTAGTATGGACATGTGTGTCATTCTCAGTGCCAAGCAAAATACCTTCTGAAATTCCAAGAAGACTAGTTGCTCCTCTAGCTTGGGAATCTACATCTTTACACCATTGGACAGTTATCAAAGTAATTCATGTTGAACTAAAGCCTTGTTTGGATAATCTAACTTATGGAGAAATTAGATAAAAGAGGTTCTGAAAAATTTGAGATGTTAAAGTTAATATCAACTTTTACAAAAATATGGAACGTACCCTAAGTTATATTTGTTGCAGTTGTGGGGAAATATTGACTTCAATTTATGCTGCAGGACATGGGAAGGGTTTCTCCAACATATATTTTTGCTGCTTTTATTCCTGCCTTGATGGTAGCAGGGCTTTACTTCTTTGATCATAGCGTTGCTTCGGGGATGGCACAGCAGAAGGAGTTTAATCTCAAGAAACCTTCTGCATATCATTATGACATATTCTTACTAGGATTTGTGGTATATATATAAATACATACATTCCCTTTGTAAATACTATTAGAAAGTTGCATAATTATGAATCTCATTATTAGTGGCAAAAACCTAATGCTTTGTTTTGGCAAACACGTTACAGACTTTGATTTGTGGACTACTTGGCTTACCTCCTTCAAATGGTGTTCTTCCTCAATCTCCTATGCATACTAAGAGCCTCTCAGTTCTCAAGGGTCTGGTAGGTGAATGACTATTATAATTTTTATAAAGCATAGGAGAGAAATTTTTTGAAAAAAGATCTTAGTTTGGTGAAGTCTTGCATAGTCGATACATAATATGATATTATAGTGGTTTTTGATCCATGTAACTGATCCCACATAGTGAAAATAGACGCTGATAAGTAGACCGTAATATTTAAAAAAAGTTTTGTATTCTGTAACTATAAGTATTGCATTTTGCACGGTAGAAAACTTTAGAGGGAATACCCATAATCTTTTGTAAAGCATTAGAGAGAAGGTTATAGAAAAGATGCGAGTTTGGTAGAGTCCATCATAGTTGCATTATGTTGTGTAGATATGATTCGTGATATGATATTATAATGTCGTTTGATCCATGTAACAAACCTCATGTATTCTCTGATAAGTGGACAGCGGTATTTAAACAAAATTTTGTACTTTCTAACTCTGAGCATTGCATAATAAAAAATCATTATCCACCCTGCTGCCGGTCTGAAAGAGACGTTGACACAATTGACAGAACTATGTGATCTATTGTTGTTCTCTTGTTTGTCTATTTATTTGTATTAATGATTAAATTAAATGGGATACTTTTGATAAGGTAATTTATGAAATTGTAGATGATCAGAAGAAAGATGGTTGAAAGTGCCAAGGAAAGCATAAAAAAGAAAGCTAGCAACTCTGAAATCTATGGAAAGATGCAAGCAGTGTTTGTAGAAATGGACAGCAGCCCAGTTGTAAGTCTTATAATAGTATAGAAATTGACATTTAATCTTGTTCTTTCAAATAAACACAATTAACAAATAGTAAAGTTATGTATCGGCTTTGAAGTACAGACACAGACATCAACACAACACTAACACACTATCGGTAATAATTTGAAAAATGAAAGTAATCGAGTGCAGCAACATGTGTCGGTGTTAGACGCTAGATACACCTTCAATCTAAAGTTACTTATTGGCTATGAATTATTGACACACACACCACACATACACGGCACAACCACTGCCACATCACCCATAATTATTTAAAAAAGGGAAGTAATTGAATATAACCACATGTGTTAGTGTCGTGTTGGCGTTGAACACCGTCTTCAATCTAAAGTTTTAGTGCAACATAGCTTATTTTTCCCAAACATGGTTAACTTTCAGACTTCTGTGGAAAGGGAACTAGAGAACCTAAAAGAGGTAATCCTAAAAGGTGAAGATAAAGGAGAAAACAAAGATACATTTGATCCTGAGAAGCATATTGACGCATGCTTGCCTGTTAGAGTAAATGAGCAAAGAGTGAGCAATCTTTTACAATCACTCTTTGTTGGAGCATCAGTCTTTGCCATGCCTGTCATTAAGAAAATTCCAACTTCTGTTTTGTGGGGATACTTTGCATACATGGCCATTGATAGTCTTCCTGGTAATCAATTCTGGGAAAGGATACTGCTTCTCTTTGTATCACCTAGTAGGTGGTTCAAGTAA

Protein sequence

>MS.gene37315.t1

MEWLKSPFKGIISDIRGRAQCYKDDWTCAFRSGIGILAPTTYIFFASALPVIAFGEQLNRDTDGRLSTVETLASTAICGIIHSIIGGQPLLIVGVAEPTIIMYTYLYNFAKNKDGLGQELFLAWAGWVCVWTSLLLFLLAIFNVGNIVNRFTRVAEELFGMLISVLFIQEAIKGIIKEFSVPKNENSTSEQYQFHWLYVNGLLGIIFTFGLLYTALKSRRARSWLYGTGWLRSFIADYGVPFLVVVWTCVSFSVPSKIPSEIPRRLVAPLAWESTSLHHWTVIKDMGRVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKEFNLKKPSAYHYDIFLLGFVTLICGLLGLPPSNGVLPQSPMHTKSLSVLKGLMIRRKMVESAKESIKKKASNSEIYGKMQAVFVEMDSSPVTSVERELENLKEVILKGEDKGENKDTFDPEKHIDACLPVRVNEQRVSNLLQSLFVGASVFAMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVSPSRWFK