Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46177.t1 | XP_013448875.1 | 98 | 255 | 5 | 0 | 1 | 255 | 75 | 329 | 3.90E-138 | 500.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46177.t1 | O80934 | 81.5 | 248 | 46 | 0 | 8 | 255 | 78 | 325 | 3.2e-117 | 422.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46177.t1 | I3TAJ6 | 98.0 | 255 | 5 | 0 | 1 | 255 | 75 | 329 | 2.8e-138 | 500.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene46177 | 0.802389 | 5.74E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene46177 | 0.872747 | 2.51E-67 | -1.69E-46 |
| MS.gene049427 | MS.gene46177 | 0.82838 | 9.28E-55 | -1.69E-46 |
| MS.gene049491 | MS.gene46177 | 0.867257 | 1.56E-65 | -1.69E-46 |
| MS.gene049599 | MS.gene46177 | -0.812273 | 4.61E-51 | -1.69E-46 |
| MS.gene049614 | MS.gene46177 | 0.84699 | 1.53E-59 | -1.69E-46 |
| MS.gene049661 | MS.gene46177 | 0.859629 | 3.62E-63 | -1.69E-46 |
| MS.gene049662 | MS.gene46177 | 0.858319 | 8.94E-63 | -1.69E-46 |
| MS.gene049758 | MS.gene46177 | 0.891504 | 3.74E-74 | -1.69E-46 |
| MS.gene049760 | MS.gene46177 | 0.818903 | 1.54E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene46177 | 0.880023 | 7.72E-70 | -1.69E-46 |
| MS.gene050099 | MS.gene46177 | 0.845782 | 3.28E-59 | -1.69E-46 |
| MS.gene050128 | MS.gene46177 | 0.84662 | 1.94E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene46177 | 0.882101 | 1.38E-70 | -1.69E-46 |
| MS.gene050397 | MS.gene46177 | 0.892468 | 1.54E-74 | -1.69E-46 |
| MS.gene050404 | MS.gene46177 | 0.811372 | 7.24E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene46177 | 0.800354 | 1.50E-48 | -1.69E-46 |
| MS.gene050432 | MS.gene46177 | 0.874849 | 4.90E-68 | -1.69E-46 |
| MS.gene050464 | MS.gene46177 | 0.811347 | 7.33E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene46177 | 0.835396 | 1.72E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene46177 | 0.867832 | 1.02E-65 | -1.69E-46 |
| MS.gene050770 | MS.gene46177 | 0.870137 | 1.83E-66 | -1.69E-46 |
| MS.gene05101 | MS.gene46177 | 0.910987 | 1.01E-82 | -1.69E-46 |
| MS.gene051228 | MS.gene46177 | 0.802606 | 5.18E-49 | -1.69E-46 |
| MS.gene051255 | MS.gene46177 | 0.813435 | 2.56E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene46177 | 0.880882 | 3.81E-70 | -1.69E-46 |
| MS.gene051582 | MS.gene46177 | 0.801341 | 9.43E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene46177 | 0.82101 | 5.07E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene46177 | 0.84065 | 7.65E-58 | -1.69E-46 |
| MS.gene051692 | MS.gene46177 | 0.826783 | 2.24E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene46177 | 0.809371 | 1.96E-50 | -1.69E-46 |
| MS.gene051877 | MS.gene46177 | 0.836602 | 8.50E-57 | -1.69E-46 |
| MS.gene052078 | MS.gene46177 | 0.900223 | 9.08E-78 | -1.69E-46 |
| MS.gene052178 | MS.gene46177 | 0.870869 | 1.05E-66 | -1.69E-46 |
| MS.gene052188 | MS.gene46177 | 0.826065 | 3.33E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene46177 | 0.816472 | 5.43E-52 | -1.69E-46 |
| MS.gene052287 | MS.gene46177 | 0.850327 | 1.82E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene46177 | 0.86099 | 1.41E-63 | -1.69E-46 |
| MS.gene052310 | MS.gene46177 | 0.870089 | 1.90E-66 | -1.69E-46 |
| MS.gene052322 | MS.gene46177 | 0.848535 | 5.76E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene46177 | 0.90036 | 7.92E-78 | -1.69E-46 |
| MS.gene052340 | MS.gene46177 | 0.848456 | 6.06E-60 | -1.69E-46 |
| MS.gene052379 | MS.gene46177 | 0.811916 | 5.51E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene46177 | 0.820421 | 6.92E-53 | -1.69E-46 |
| MS.gene052508 | MS.gene46177 | 0.809665 | 1.69E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene46177 | 0.822543 | 2.24E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene46177 | 0.800976 | 1.12E-48 | -1.69E-46 |
| MS.gene053181 | MS.gene46177 | 0.822868 | 1.88E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene46177 | 0.87879 | 2.11E-69 | -1.69E-46 |
| MS.gene053322 | MS.gene46177 | 0.841746 | 3.94E-58 | -1.69E-46 |
| MS.gene053384 | MS.gene46177 | 0.809677 | 1.68E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene46177 | 0.855457 | 6.23E-62 | -1.69E-46 |
| MS.gene053813 | MS.gene46177 | 0.800849 | 1.19E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene46177 | 0.867403 | 1.40E-65 | -1.69E-46 |
| MS.gene053907 | MS.gene46177 | 0.802701 | 4.95E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene46177 | 0.803275 | 3.77E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene46177 | 0.824682 | 7.07E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene46177 | 0.817767 | 2.78E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene46177 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene46177 | 0.846093 | 2.70E-59 | -1.69E-46 |
| MS.gene054214 | MS.gene46177 | 0.803669 | 3.12E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene46177 | 0.883497 | 4.27E-71 | -1.69E-46 |
| MS.gene054473 | MS.gene46177 | 0.811075 | 8.39E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene46177 | 0.835057 | 2.09E-56 | -1.69E-46 |
| MS.gene054802 | MS.gene46177 | 0.856571 | 2.94E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene46177 | 0.859175 | 4.96E-63 | -1.69E-46 |
| MS.gene054804 | MS.gene46177 | 0.858893 | 6.02E-63 | -1.69E-46 |
| MS.gene054955 | MS.gene46177 | 0.802826 | 4.67E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene46177 | 0.823573 | 1.29E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene46177 | 0.866769 | 2.24E-65 | -1.69E-46 |
| MS.gene055277 | MS.gene46177 | 0.942917 | 3.06E-102 | -1.69E-46 |
| MS.gene055390 | MS.gene46177 | 0.877802 | 4.69E-69 | -1.69E-46 |
| MS.gene055397 | MS.gene46177 | 0.827848 | 1.25E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene46177 | 0.806367 | 8.51E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene46177 | 0.892395 | 1.65E-74 | -1.69E-46 |
| MS.gene055428 | MS.gene46177 | 0.89894 | 3.24E-77 | -1.69E-46 |
| MS.gene055499 | MS.gene46177 | 0.831519 | 1.59E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene46177 | 0.801451 | 8.95E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene46177 | 0.834049 | 3.75E-56 | -1.69E-46 |
| MS.gene055896 | MS.gene46177 | 0.845597 | 3.68E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene46177 | 0.831462 | 1.65E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene46177 | 0.860844 | 1.56E-63 | -1.69E-46 |
| MS.gene056314 | MS.gene46177 | 0.806563 | 7.74E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene46177 | 0.825513 | 4.50E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene46177 | 0.872736 | 2.53E-67 | -1.69E-46 |
| MS.gene056609 | MS.gene46177 | 0.866416 | 2.90E-65 | -1.69E-46 |
| MS.gene056612 | MS.gene46177 | 0.872608 | 2.79E-67 | -1.69E-46 |
| MS.gene056772 | MS.gene46177 | 0.801465 | 8.89E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene46177 | 0.841566 | 4.40E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene46177 | 0.807975 | 3.89E-50 | -1.69E-46 |
| MS.gene056931 | MS.gene46177 | 0.804415 | 2.18E-49 | -1.69E-46 |
| MS.gene056933 | MS.gene46177 | 0.800849 | 1.19E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene46177 | 0.823598 | 1.27E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene46177 | 0.860518 | 1.95E-63 | -1.69E-46 |
| MS.gene057121 | MS.gene46177 | 0.806392 | 8.41E-50 | -1.69E-46 |
| MS.gene057123 | MS.gene46177 | 0.847573 | 1.06E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene46177 | 0.841415 | 4.82E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene46177 | 0.800313 | 1.53E-48 | -1.69E-46 |
| MS.gene057245 | MS.gene46177 | 0.806924 | 6.50E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene46177 | 0.866966 | 1.94E-65 | -1.69E-46 |
| MS.gene05733 | MS.gene46177 | 0.865943 | 4.09E-65 | -1.69E-46 |
| MS.gene057370 | MS.gene46177 | 0.800529 | 1.38E-48 | -1.69E-46 |
| MS.gene057439 | MS.gene46177 | 0.82103 | 5.01E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene46177 | 0.805657 | 1.20E-49 | -1.69E-46 |
| MS.gene057449 | MS.gene46177 | 0.817148 | 3.83E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene46177 | 0.819355 | 1.21E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene46177 | 0.86219 | 6.04E-64 | -1.69E-46 |
| MS.gene058006 | MS.gene46177 | 0.814482 | 1.51E-51 | -1.69E-46 |
| MS.gene05806 | MS.gene46177 | 0.822333 | 2.51E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene46177 | 0.839721 | 1.34E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene46177 | 0.889164 | 3.09E-73 | -1.69E-46 |
| MS.gene058233 | MS.gene46177 | 0.838666 | 2.51E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene46177 | 0.807378 | 5.20E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene46177 | 0.85087 | 1.28E-60 | -1.69E-46 |
| MS.gene058365 | MS.gene46177 | 0.820644 | 6.15E-53 | -1.69E-46 |
| MS.gene05842 | MS.gene46177 | 0.819861 | 9.30E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene46177 | 0.896825 | 2.54E-76 | -1.69E-46 |
| MS.gene058787 | MS.gene46177 | 0.836523 | 8.91E-57 | -1.69E-46 |
| MS.gene058845 | MS.gene46177 | 0.8163 | 5.94E-52 | -1.69E-46 |
| MS.gene058903 | MS.gene46177 | 0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene46177 | 0.814249 | 1.70E-51 | -1.69E-46 |
| MS.gene058993 | MS.gene46177 | 0.810339 | 1.21E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene46177 | 0.885647 | 6.79E-72 | -1.69E-46 |
| MS.gene059228 | MS.gene46177 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene46177 | 0.825824 | 3.80E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene46177 | 0.883619 | 3.85E-71 | -1.69E-46 |
| MS.gene059342 | MS.gene46177 | 0.805432 | 1.34E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene46177 | 0.883695 | 3.61E-71 | -1.69E-46 |
| MS.gene059536 | MS.gene46177 | 0.833006 | 6.83E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene46177 | 0.859822 | 3.17E-63 | -1.69E-46 |
| MS.gene05959 | MS.gene46177 | 0.848758 | 5.00E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene46177 | 0.863229 | 2.89E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene46177 | 0.853968 | 1.68E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene46177 | 0.870807 | 1.10E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene46177 | 0.862732 | 4.12E-64 | -1.69E-46 |
| MS.gene059708 | MS.gene46177 | 0.849789 | 2.58E-60 | -1.69E-46 |
| MS.gene05984 | MS.gene46177 | 0.853514 | 2.27E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene46177 | 0.899951 | 1.19E-77 | -1.69E-46 |
| MS.gene059960 | MS.gene46177 | 0.838209 | 3.29E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene46177 | 0.856076 | 4.11E-62 | -1.69E-46 |
| MS.gene060005 | MS.gene46177 | 0.870386 | 1.52E-66 | -1.69E-46 |
| MS.gene06037 | MS.gene46177 | 0.888414 | 6.03E-73 | -1.69E-46 |
| MS.gene060403 | MS.gene46177 | 0.812026 | 5.21E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene46177 | 0.820787 | 5.70E-53 | -1.69E-46 |
| MS.gene060559 | MS.gene46177 | 0.807988 | 3.86E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene46177 | 0.854499 | 1.18E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene46177 | 0.83999 | 1.14E-57 | -1.69E-46 |
| MS.gene06090 | MS.gene46177 | 0.806438 | 8.23E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene46177 | 0.874826 | 4.98E-68 | -1.69E-46 |
| MS.gene061051 | MS.gene46177 | -0.849598 | 2.92E-60 | -1.69E-46 |
| MS.gene061112 | MS.gene46177 | 0.812521 | 4.07E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene46177 | 0.835495 | 1.62E-56 | -1.69E-46 |
| MS.gene061265 | MS.gene46177 | 0.810133 | 1.34E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46177.t1 | MTR_7g062140 | 98.039 | 255 | 5 | 0 | 1 | 255 | 75 | 329 | 0.0 | 514 |
| MS.gene46177.t1 | MTR_4g021815 | 80.000 | 255 | 51 | 0 | 1 | 255 | 1 | 255 | 5.35e-156 | 434 |
| MS.gene46177.t1 | MTR_8g010700 | 30.263 | 228 | 121 | 8 | 42 | 248 | 108 | 318 | 4.07e-22 | 93.6 |
| MS.gene46177.t1 | MTR_4g068970 | 36.458 | 96 | 57 | 2 | 107 | 198 | 183 | 278 | 3.93e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46177.t1 | AT2G37660 | 81.452 | 248 | 46 | 0 | 8 | 255 | 78 | 325 | 1.08e-154 | 433 |
| MS.gene46177.t1 | AT5G02240 | 78.226 | 248 | 54 | 0 | 8 | 255 | 6 | 253 | 2.34e-143 | 402 |
| MS.gene46177.t1 | AT4G31530 | 33.051 | 236 | 119 | 8 | 35 | 248 | 100 | 318 | 7.36e-23 | 95.5 |
| MS.gene46177.t1 | AT4G31530 | 32.877 | 219 | 109 | 7 | 35 | 232 | 100 | 301 | 7.17e-21 | 90.5 |
| MS.gene46177.t1 | AT2G34460 | 31.061 | 264 | 142 | 12 | 2 | 251 | 40 | 277 | 6.66e-19 | 84.0 |
| MS.gene46177.t1 | AT3G18890 | 36.458 | 96 | 57 | 2 | 107 | 198 | 183 | 278 | 1.92e-12 | 67.0 |
Find 60 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGTACTGTGCTTGTTAC+TGG | 0.291951 | 7.2:-40116630 | MS.gene46177:CDS |
| TAACCATCCTTTGAACAGTT+TGG | 0.300060 | 7.2:-40114180 | MS.gene46177:CDS |
| TCAATTTAAGGCATTTGATT+TGG | 0.308916 | 7.2:-40113396 | MS.gene46177:CDS |
| GAACAATATCTTGCTGATTC+TGG | 0.314087 | 7.2:-40114024 | MS.gene46177:CDS |
| GATTGTGTTAGTAGGGTCTA+TGG | 0.317597 | 7.2:-40114216 | MS.gene46177:CDS |
| GAGCCTAATAGTACCTGTTC+AGG | 0.328614 | 7.2:+40114636 | None:intergenic |
| AACCATCCTTTGAACAGTTT+GGG | 0.329707 | 7.2:-40114179 | MS.gene46177:CDS |
| GTGTACCTTATAATCGTATA+TGG | 0.329899 | 7.2:+40113997 | None:intergenic |
| GAAGAAAGCAAGCAGAAAAT+TGG | 0.340025 | 7.2:-40114831 | MS.gene46177:CDS |
| GTATTCCATATACGATTATA+AGG | 0.357893 | 7.2:-40114002 | MS.gene46177:intron |
| TTTGGGTGATGGGAATATAT+TGG | 0.358986 | 7.2:-40114162 | MS.gene46177:intron |
| GTAAAGCAGATTGTGTTAGT+AGG | 0.387562 | 7.2:-40114224 | MS.gene46177:CDS |
| AAAGCTTTAAAGTCCTTTGT+TGG | 0.391766 | 7.2:+40113347 | None:intergenic |
| CTTTGAACAGTTTGGGTGAT+GGG | 0.397272 | 7.2:-40114172 | MS.gene46177:CDS |
| GGTATCCGAGAACTCGTCAT+AGG | 0.398344 | 7.2:-40113828 | MS.gene46177:CDS |
| CCTTCCCTATGACGAGTTCT+CGG | 0.402259 | 7.2:+40113823 | None:intergenic |
| GTTGGTGAACCTGTTCCCTC+AGG | 0.424555 | 7.2:+40113365 | None:intergenic |
| AGTCTTGTTCCTGCCATTCA+AGG | 0.426063 | 7.2:-40114765 | MS.gene46177:CDS |
| CCTTGAGTTGGATCGAATCC+AGG | 0.431455 | 7.2:+40114696 | None:intergenic |
| ATTGTAGGTTTGGAAAAGAA+AGG | 0.432611 | 7.2:-40114049 | MS.gene46177:intron |
| TGTTGCAGAAGTCTGTATTC+AGG | 0.433542 | 7.2:-40113754 | MS.gene46177:intron |
| GCATCAAAACCTGAGGGAAC+AGG | 0.441936 | 7.2:-40113374 | MS.gene46177:CDS |
| ACTGGTGCTGCTGGTCGTAC+AGG | 0.446496 | 7.2:-40116612 | MS.gene46177:intron |
| TCAGTGGTACTCCACTTGTA+AGG | 0.450452 | 7.2:+40114724 | None:intergenic |
| GAGAGCATCTATACCTTGAA+TGG | 0.462991 | 7.2:+40114752 | None:intergenic |
| AATGGCAGGAACAAGACTTT+CGG | 0.485862 | 7.2:+40114770 | None:intergenic |
| ACATGAACAGCTAAGGCTGC+TGG | 0.491366 | 7.2:-40114248 | MS.gene46177:intron |
| CCTTTGAACAGTTTGGGTGA+TGG | 0.492670 | 7.2:-40114173 | MS.gene46177:CDS |
| GTGCTTGTTACTGGTGCTGC+TGG | 0.493811 | 7.2:-40116621 | MS.gene46177:CDS |
| GCATCTATACCTTGAATGGC+AGG | 0.502385 | 7.2:+40114756 | None:intergenic |
| AGATGGTGCATACCCTGAAC+AGG | 0.502612 | 7.2:-40114649 | MS.gene46177:intron |
| CTAAATTGAGTCAGGGCTGG+TGG | 0.503589 | 7.2:-40113870 | MS.gene46177:intron |
| AACTGTTCAAAGGATGGTTA+AGG | 0.503693 | 7.2:+40114183 | None:intergenic |
| CCTCTAGCGACGTATTCGTT+TGG | 0.508421 | 7.2:+40114867 | None:intergenic |
| TCTAGCTATGGTTCTGATGT+CGG | 0.517693 | 7.2:+40113782 | None:intergenic |
| ATTGTGTTAGTAGGGTCTAT+GGG | 0.532454 | 7.2:-40114215 | MS.gene46177:CDS |
| ATACAGACTTCTGCAACATC+AGG | 0.535402 | 7.2:+40113759 | None:intergenic |
| GTTTACTAGGTTGACTGGAT+CGG | 0.535946 | 7.2:-40114379 | MS.gene46177:intron |
| TAAAGCAGATTGTGTTAGTA+GGG | 0.541706 | 7.2:-40114223 | MS.gene46177:CDS |
| CCAAACGAATACGTCGCTAG+AGG | 0.542415 | 7.2:-40114867 | MS.gene46177:CDS |
| AGCCTAATAGTACCTGTTCA+GGG | 0.567506 | 7.2:+40114637 | None:intergenic |
| ACCATCTTCAAAATAGAACT+CGG | 0.567981 | 7.2:+40114665 | None:intergenic |
| CACCCAAACTGTTCAAAGGA+TGG | 0.577560 | 7.2:+40114177 | None:intergenic |
| TGCAACATCAGGTCTAGCTA+TGG | 0.582809 | 7.2:+40113770 | None:intergenic |
| CCTGGATTCGATCCAACTCA+AGG | 0.593139 | 7.2:-40114696 | MS.gene46177:CDS |
| GTATCCGAGAACTCGTCATA+GGG | 0.593785 | 7.2:-40113827 | MS.gene46177:CDS |
| GCTCTCATAATCCTTACAAG+TGG | 0.596395 | 7.2:-40114735 | MS.gene46177:CDS |
| CCATCACCCAAACTGTTCAA+AGG | 0.597247 | 7.2:+40114173 | None:intergenic |
| TGATTTGGCATCAAAACCTG+AGG | 0.602928 | 7.2:-40113381 | MS.gene46177:CDS |
| GGGAACAGGTTCACCAACAA+AGG | 0.603238 | 7.2:-40113360 | MS.gene46177:CDS |
| GGAGTACCACTGATGAAACC+TGG | 0.607060 | 7.2:-40114714 | MS.gene46177:CDS |
| CAAACGAATACGTCGCTAGA+GGG | 0.612208 | 7.2:-40114866 | MS.gene46177:CDS |
| CCATCTTCAAAATAGAACTC+GGG | 0.615847 | 7.2:+40114666 | None:intergenic |
| TGGTGGTTTGCAAGACAAAG+AGG | 0.615970 | 7.2:-40113853 | MS.gene46177:CDS |
| CCGAGAACTCGTCATAGGGA+AGG | 0.618903 | 7.2:-40113823 | MS.gene46177:CDS |
| GATTTGGCATCAAAACCTGA+GGG | 0.627143 | 7.2:-40113380 | MS.gene46177:CDS |
| GGTGGTTTGCAAGACAAAGA+GGG | 0.640822 | 7.2:-40113852 | MS.gene46177:CDS |
| GTGTTAGTAGGGTCTATGGG+TGG | 0.647322 | 7.2:-40114212 | MS.gene46177:CDS |
| TCGAATCCAGGTTTCATCAG+TGG | 0.648497 | 7.2:+40114708 | None:intergenic |
| GGTTTGCAAGACAAAGAGGG+AGG | 0.721811 | 7.2:-40113849 | MS.gene46177:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTAAAATATGAATAAAAA+AGG | + | chr7.2:40115559-40115578 | None:intergenic | 10.0% |
| !! | TATATTACATCTTAAAATTT+GGG | + | chr7.2:40114285-40114304 | None:intergenic | 10.0% |
| !! | TTTATAAAAAATTAAAAGAG+AGG | - | chr7.2:40115074-40115093 | MS.gene46177:intron | 10.0% |
| !! | ATGATACTATCTTAAAATTT+AGG | + | chr7.2:40114084-40114103 | None:intergenic | 15.0% |
| !! | CTATATTACATCTTAAAATT+TGG | + | chr7.2:40114286-40114305 | None:intergenic | 15.0% |
| !! | TACATATTCAATATAATGTT+GGG | + | chr7.2:40113798-40113817 | None:intergenic | 15.0% |
| !! | TTACATATTCAATATAATGT+TGG | + | chr7.2:40113799-40113818 | None:intergenic | 15.0% |
| !!! | AAAATTTCTGATTTTTTGTA+TGG | - | chr7.2:40113928-40113947 | MS.gene46177:intron | 15.0% |
| !!! | AAATTTCTGATTTTTTGTAT+GGG | - | chr7.2:40113929-40113948 | MS.gene46177:intron | 15.0% |
| !!! | AGTAATATGAGTTTTAATTA+AGG | - | chr7.2:40113605-40113624 | MS.gene46177:intron | 15.0% |
| !!! | CAAATTTTAAGATGTAATAT+AGG | - | chr7.2:40114284-40114303 | MS.gene46177:intron | 15.0% |
| !!! | TTTAGTAATTTTTGTTTACT+AGG | - | chr7.2:40115572-40115591 | MS.gene46177:intron | 15.0% |
| !! | AAAATTAAGATTTCTGACTT+GGG | - | chr7.2:40113875-40113894 | MS.gene46177:intron | 20.0% |
| !! | AAAATTAATTTCAATACCAC+AGG | + | chr7.2:40115691-40115710 | None:intergenic | 20.0% |
| !! | AAATATAGGAATATAAATGC+AGG | - | chr7.2:40113563-40113582 | MS.gene46177:intron | 20.0% |
| !! | AATATAGGAATATAAATGCA+GGG | - | chr7.2:40113564-40113583 | MS.gene46177:intron | 20.0% |
| !! | AATTAAGATTGTTAGAATTG+AGG | - | chr7.2:40113820-40113839 | MS.gene46177:CDS | 20.0% |
| !! | CTTCAACTTTATAATATAGA+TGG | + | chr7.2:40114965-40114984 | None:intergenic | 20.0% |
| !! | TAAAATTAAGATTTCTGACT+TGG | - | chr7.2:40113874-40113893 | MS.gene46177:intron | 20.0% |
| !! | TAAATCAGAAAGTGATAAAA+AGG | + | chr7.2:40115027-40115046 | None:intergenic | 20.0% |
| !! | TAAGCAACAATATAAGAAAA+TGG | + | chr7.2:40116486-40116505 | None:intergenic | 20.0% |
| !! | TACTATCTTAAAATTTAGGT+TGG | + | chr7.2:40114080-40114099 | None:intergenic | 20.0% |
| !! | TATAAACTTATAAATTCCTG+TGG | - | chr7.2:40115672-40115691 | MS.gene46177:intron | 20.0% |
| !! | TATAACAATGTTAATATTGC+TGG | + | chr7.2:40116413-40116432 | None:intergenic | 20.0% |
| !! | TGTTAAACAAATTGAATCAA+GGG | + | chr7.2:40116527-40116546 | None:intergenic | 20.0% |
| !! | TTAGAATTATTTATCAAGCA+CGG | - | chr7.2:40113639-40113658 | MS.gene46177:intron | 20.0% |
| !!! | AAGAAAATGAGTTTTTAAGT+GGG | - | chr7.2:40114209-40114228 | MS.gene46177:CDS | 20.0% |
| !!! | TAAGAAAATGAGTTTTTAAG+TGG | - | chr7.2:40114208-40114227 | MS.gene46177:CDS | 20.0% |
| !!! | TTAGAATTGAGGTTTAATTT+AGG | - | chr7.2:40113831-40113850 | MS.gene46177:CDS | 20.0% |
| ! | AATAATGCTATACTTGTCTT+TGG | + | chr7.2:40114903-40114922 | None:intergenic | 25.0% |
| ! | AGAAAATTAATGCATATACC+GGG | - | chr7.2:40114355-40114374 | MS.gene46177:intron | 25.0% |
| ! | ATGAATCATAATCTACCTTT+CGG | + | chr7.2:40114837-40114856 | None:intergenic | 25.0% |
| ! | ATTCGATGTAATTATATGTG+TGG | - | chr7.2:40113724-40113743 | MS.gene46177:intron | 25.0% |
| ! | ATTTCTTGTTAATGACACAA+TGG | - | chr7.2:40114518-40114537 | MS.gene46177:intron | 25.0% |
| ! | CAATTTAAACCACAACATTA+AGG | - | chr7.2:40114401-40114420 | MS.gene46177:intron | 25.0% |
| ! | CAGAAAATTAATGCATATAC+CGG | - | chr7.2:40114354-40114373 | MS.gene46177:intron | 25.0% |
| ! | CATCAAAATGAGTTTATAGT+GGG | - | chr7.2:40114008-40114027 | MS.gene46177:CDS | 25.0% |
| ! | CTGACTCAATTTAGAAAAAT+GGG | + | chr7.2:40116088-40116107 | None:intergenic | 25.0% |
| ! | CTGTTAAACAAATTGAATCA+AGG | + | chr7.2:40116528-40116547 | None:intergenic | 25.0% |
| ! | GTATTCCATATACGATTATA+AGG | - | chr7.2:40115962-40115981 | MS.gene46177:intron | 25.0% |
| ! | TAGTATACATTTCCAATTAG+AGG | + | chr7.2:40114628-40114647 | None:intergenic | 25.0% |
| ! | TTCGATGTAATTATATGTGT+GGG | - | chr7.2:40113725-40113744 | MS.gene46177:intron | 25.0% |
| ! | TTCTATGATTAATGCAGAAA+AGG | + | chr7.2:40115647-40115666 | None:intergenic | 25.0% |
| !! | AAATTAAGATTTCTGACTTG+GGG | - | chr7.2:40113876-40113895 | MS.gene46177:intron | 25.0% |
| !! | CATTTTTCTAAATTGAGTCA+GGG | - | chr7.2:40116087-40116106 | MS.gene46177:intron | 25.0% |
| !! | CTTGATTCAATTTGTTTAAC+AGG | - | chr7.2:40116526-40116545 | MS.gene46177:intron | 25.0% |
| !! | TCAATTTAAGGCATTTGATT+TGG | - | chr7.2:40116568-40116587 | MS.gene46177:intron | 25.0% |
| !! | TGATGAAAATTTGTTCAAAC+CGG | + | chr7.2:40114743-40114762 | None:intergenic | 25.0% |
| !!! | AAAATGGTGGAATTGTATTT+TGG | + | chr7.2:40116470-40116489 | None:intergenic | 25.0% |
| !!! | GTATGATTCCTACTTTTATT+TGG | - | chr7.2:40116017-40116036 | MS.gene46177:intron | 25.0% |
| !!! | GTTTTTGTTTGCAATATAGA+AGG | - | chr7.2:40114675-40114694 | MS.gene46177:CDS | 25.0% |
| !!! | TACGAAGTTTTGTCAAATAA+TGG | + | chr7.2:40116337-40116356 | None:intergenic | 25.0% |
| !!! | TATCTTAAAATTTAGGTTGG+AGG | + | chr7.2:40114077-40114096 | None:intergenic | 25.0% |
| AAAGGTTGGATCATATAATC+GGG | - | chr7.2:40114787-40114806 | MS.gene46177:CDS | 30.0% | |
| AAAGTCAGACTCATAAAATC+AGG | - | chr7.2:40114185-40114204 | MS.gene46177:CDS | 30.0% | |
| AATAAGCTGAAAACAGCATA+TGG | - | chr7.2:40115403-40115422 | MS.gene46177:intron | 30.0% | |
| ACCATCTTCAAAATAGAACT+CGG | + | chr7.2:40115302-40115321 | None:intergenic | 30.0% | |
| ATTGTAGGTTTGGAAAAGAA+AGG | - | chr7.2:40115915-40115934 | MS.gene46177:intron | 30.0% | |
| CAAAGGTTGGATCATATAAT+CGG | - | chr7.2:40114786-40114805 | MS.gene46177:CDS | 30.0% | |
| CAGAAAAATCAAATAGATGC+TGG | - | chr7.2:40115609-40115628 | MS.gene46177:intron | 30.0% | |
| CAGTAAATTTACAGTTACAG+AGG | - | chr7.2:40114574-40114593 | MS.gene46177:intron | 30.0% | |
| CATATGGGAAATGTATTATG+CGG | + | chr7.2:40115512-40115531 | None:intergenic | 30.0% | |
| CATCAAAAACCTTAATGTTG+TGG | + | chr7.2:40114413-40114432 | None:intergenic | 30.0% | |
| CCTGACTCAATTTAGAAAAA+TGG | + | chr7.2:40116089-40116108 | None:intergenic | 30.0% | |
| CTTTATAATATAGATGGACC+AGG | + | chr7.2:40114959-40114978 | None:intergenic | 30.0% | |
| GAAGAAAGATTCATAGATTG+TGG | + | chr7.2:40114867-40114886 | None:intergenic | 30.0% | |
| GCAACAATATAAGAAAATGG+TGG | + | chr7.2:40116483-40116502 | None:intergenic | 30.0% | |
| GCATCAAAATGAGTTTATAG+TGG | - | chr7.2:40114007-40114026 | MS.gene46177:CDS | 30.0% | |
| GCTGAAATGTGTGAAAATAT+AGG | - | chr7.2:40113549-40113568 | MS.gene46177:intron | 30.0% | |
| GTAATTGAATCCTACAAAAC+CGG | + | chr7.2:40114055-40114074 | None:intergenic | 30.0% | |
| GTGTACCTTATAATCGTATA+TGG | + | chr7.2:40115970-40115989 | None:intergenic | 30.0% | |
| GTTAGATGCCAAATAAAAGT+AGG | + | chr7.2:40116028-40116047 | None:intergenic | 30.0% | |
| TAAAGCAGATTGTGTTAGTA+GGG | - | chr7.2:40115741-40115760 | MS.gene46177:intron | 30.0% | |
| TAAGATTCTCACATGAGATT+AGG | - | chr7.2:40113985-40114004 | MS.gene46177:intron | 30.0% | |
| TATACGATTATAAGGTACAC+CGG | - | chr7.2:40115970-40115989 | MS.gene46177:intron | 30.0% | |
| TCAACTTAAGCATGACATAT+GGG | + | chr7.2:40115527-40115546 | None:intergenic | 30.0% | |
| TGAATCATAATCTACCTTTC+GGG | + | chr7.2:40114836-40114855 | None:intergenic | 30.0% | |
| TGATGAGAAAAATGCAAGTT+CGG | - | chr7.2:40115869-40115888 | MS.gene46177:intron | 30.0% | |
| TGCTTCCTAAACCAAAAATT+AGG | - | chr7.2:40114323-40114342 | MS.gene46177:intron | 30.0% | |
| TTGTTCAGTGTAATAGAAAC+CGG | + | chr7.2:40115992-40116011 | None:intergenic | 30.0% | |
| TTTATCTACATGAACAGCTA+AGG | - | chr7.2:40115709-40115728 | MS.gene46177:intron | 30.0% | |
| ! | ATTAAGGTTTTTGATGTCTG+TGG | - | chr7.2:40114417-40114436 | MS.gene46177:intron | 30.0% |
| ! | ATTGTTTTCATAAGTTGTCC+TGG | - | chr7.2:40115368-40115387 | MS.gene46177:intron | 30.0% |
| ! | CTGTTTGTAGACCTAATTTT+TGG | + | chr7.2:40114337-40114356 | None:intergenic | 30.0% |
| ! | TGTTGCTTAACTATGTGATT+TGG | - | chr7.2:40116497-40116516 | MS.gene46177:intron | 30.0% |
| ! | TTAACAGGCACTAAATTTTG+AGG | - | chr7.2:40116541-40116560 | MS.gene46177:intron | 30.0% |
| ! | TTTAATTGCTGTTACTTCTC+AGG | - | chr7.2:40115043-40115062 | MS.gene46177:intron | 30.0% |
| !! | AAAGCTTTAAAGTCCTTTGT+TGG | + | chr7.2:40116620-40116639 | None:intergenic | 30.0% |
| !! | AACAATAGTGTGATTTGTTC+AGG | - | chr7.2:40116375-40116394 | MS.gene46177:intron | 30.0% |
| !! | AATTAAGATTTCTGACTTGG+GGG | - | chr7.2:40113877-40113896 | MS.gene46177:intron | 30.0% |
| !! | ACATCTTAAAATTTGGGTTG+AGG | + | chr7.2:40114279-40114298 | None:intergenic | 30.0% |
| !! | ACTTTTATTTGGCATCTAAC+TGG | - | chr7.2:40116028-40116047 | MS.gene46177:intron | 30.0% |
| !! | CCATTTTTCTAAATTGAGTC+AGG | - | chr7.2:40116086-40116105 | MS.gene46177:intron | 30.0% |
| !! | TTTCGTATTGATTGTAGGTT+TGG | - | chr7.2:40115905-40115924 | MS.gene46177:intron | 30.0% |
| !! | TTTTTGTTTACTAGGTTGAC+TGG | - | chr7.2:40115580-40115599 | MS.gene46177:intron | 30.0% |
| !!! | GTAGACCTAATTTTTGGTTT+AGG | + | chr7.2:40114331-40114350 | None:intergenic | 30.0% |
| !!! | GTTGTTTTCGTATTGATTGT+AGG | - | chr7.2:40115900-40115919 | MS.gene46177:intron | 30.0% |
| !!! | TTTTTAAGTAGCATTCAGAC+CGG | - | chr7.2:40114721-40114740 | MS.gene46177:CDS | 30.0% |
| AAATGTATTATGCGGCTGTT+TGG | + | chr7.2:40115504-40115523 | None:intergenic | 35.0% | |
| AACCATCCTTTGAACAGTTT+GGG | - | chr7.2:40115785-40115804 | MS.gene46177:intron | 35.0% | |
| AACTGTTCAAAGGATGGTTA+AGG | + | chr7.2:40115784-40115803 | None:intergenic | 35.0% | |
| ACAAAAACCTCTGTATGTGT+AGG | + | chr7.2:40114663-40114682 | None:intergenic | 35.0% | |
| ATCTGTGTAGTTTCAAAGGT+TGG | - | chr7.2:40114773-40114792 | MS.gene46177:CDS | 35.0% | |
| ATTGTGTTAGTAGGGTCTAT+GGG | - | chr7.2:40115749-40115768 | MS.gene46177:intron | 35.0% | |
| CCATCTTCAAAATAGAACTC+GGG | + | chr7.2:40115301-40115320 | None:intergenic | 35.0% | |
| GAAGAAAGCAAGCAGAAAAT+TGG | - | chr7.2:40115133-40115152 | MS.gene46177:intron | 35.0% | |
| GTAAAGCAGATTGTGTTAGT+AGG | - | chr7.2:40115740-40115759 | MS.gene46177:intron | 35.0% | |
| GTAATTATATGTGTGGGTGT+CGG | - | chr7.2:40113731-40113750 | MS.gene46177:intron | 35.0% | |
| GTCAACTTAAGCATGACATA+TGG | + | chr7.2:40115528-40115547 | None:intergenic | 35.0% | |
| TAACCATCCTTTGAACAGTT+TGG | - | chr7.2:40115784-40115803 | MS.gene46177:intron | 35.0% | |
| TATGGGTTCTATTAGTGACT+TGG | - | chr7.2:40113946-40113965 | MS.gene46177:intron | 35.0% | |
| TCAAAAACGTGTAGTGATCT+GGG | + | chr7.2:40116648-40116667 | None:intergenic | 35.0% | |
| TGTTTCCTTCAACAAAAGTC+TGG | - | chr7.2:40115839-40115858 | MS.gene46177:intron | 35.0% | |
| TTCTTACTAACTTACCCGAA+AGG | - | chr7.2:40114819-40114838 | MS.gene46177:CDS | 35.0% | |
| ! | AGAGAGAGAGAGAGAATTTT+TGG | - | chr7.2:40113479-40113498 | MS.gene46177:intron | 35.0% |
| ! | CAAAATGAGTTTATAGTGGG+AGG | - | chr7.2:40114011-40114030 | MS.gene46177:CDS | 35.0% |
| ! | CAAATTTTCATCACATTGCG+AGG | - | chr7.2:40114750-40114769 | MS.gene46177:CDS | 35.0% |
| ! | CATGCTCTAAATGTTGTCTT+CGG | - | chr7.2:40114145-40114164 | MS.gene46177:intron | 35.0% |
| ! | CTATGCAAGGTGATTTTGTA+GGG | - | chr7.2:40114244-40114263 | MS.gene46177:intron | 35.0% |
| ! | GTTCACATTAGTCTCTCTTT+CGG | - | chr7.2:40114602-40114621 | MS.gene46177:intron | 35.0% |
| ! | TAGATGCTATTTGACAAACC+TGG | - | chr7.2:40116431-40116450 | MS.gene46177:intron | 35.0% |
| ! | TTGTACCAGACTTTTGTTGA+AGG | + | chr7.2:40115847-40115866 | None:intergenic | 35.0% |
| !! | CAGGGTTTTGTAGATTTCAT+TGG | - | chr7.2:40113582-40113601 | MS.gene46177:intron | 35.0% |
| !! | GAACAATATCTTGCTGATTC+TGG | - | chr7.2:40115940-40115959 | MS.gene46177:intron | 35.0% |
| !! | GCTGCAGATGATGTTTTTAT+TGG | - | chr7.2:40115157-40115176 | MS.gene46177:intron | 35.0% |
| !! | TTTGGGTGATGGGAATATAT+TGG | - | chr7.2:40115802-40115821 | MS.gene46177:intron | 35.0% |
| !! | TTTTGAGGAGGCTCAATTTA+AGG | - | chr7.2:40116556-40116575 | MS.gene46177:intron | 35.0% |
| AAATCACCTTGCATAGGTAG+AGG | + | chr7.2:40114240-40114259 | None:intergenic | 40.0% | |
| AACAGTCACAAGTGCTTATG+TGG | - | chr7.2:40115459-40115478 | MS.gene46177:intron | 40.0% | |
| AATGGCAGGAACAAGACTTT+CGG | + | chr7.2:40115197-40115216 | None:intergenic | 40.0% | |
| AGCCTAATAGTACCTGTTCA+GGG | + | chr7.2:40115330-40115349 | None:intergenic | 40.0% | |
| AGGTACTATTAGGCTCTGTT+TGG | - | chr7.2:40115335-40115354 | MS.gene46177:intron | 40.0% | |
| ATACAGACTTCTGCAACATC+AGG | + | chr7.2:40116208-40116227 | None:intergenic | 40.0% | |
| CCTACAAAATCACCTTGCAT+AGG | + | chr7.2:40114246-40114265 | None:intergenic | 40.0% | |
| CGGGTTCGAAAAAACAGTAT+CGG | - | chr7.2:40114374-40114393 | MS.gene46177:intron | 40.0% | |
| CTAAGAACCTACACATACAG+AGG | - | chr7.2:40114653-40114672 | MS.gene46177:CDS | 40.0% | |
| CTCTGTATGTGTAGGTTCTT+AGG | + | chr7.2:40114655-40114674 | None:intergenic | 40.0% | |
| CTTATTTCCATAAGCTCTCC+AGG | + | chr7.2:40115389-40115408 | None:intergenic | 40.0% | |
| CTTTGAACAGTTTGGGTGAT+GGG | - | chr7.2:40115792-40115811 | MS.gene46177:intron | 40.0% | |
| GAGGATCTGTGTAGTTTCAA+AGG | - | chr7.2:40114769-40114788 | MS.gene46177:CDS | 40.0% | |
| GATTGTGTTAGTAGGGTCTA+TGG | - | chr7.2:40115748-40115767 | MS.gene46177:intron | 40.0% | |
| GATTTGGCATCAAAACCTGA+GGG | - | chr7.2:40116584-40116603 | MS.gene46177:intron | 40.0% | |
| GCTCTCATAATCCTTACAAG+TGG | - | chr7.2:40115229-40115248 | MS.gene46177:intron | 40.0% | |
| GGCATGACACCACAAAAAAT+CGG | + | chr7.2:40113760-40113779 | None:intergenic | 40.0% | |
| GGGTTCGAAAAAACAGTATC+GGG | - | chr7.2:40114375-40114394 | MS.gene46177:intron | 40.0% | |
| TACCCTGAACAGGTACTATT+AGG | - | chr7.2:40115325-40115344 | MS.gene46177:intron | 40.0% | |
| TATAATGTTGGGACACTCCT+CGG | + | chr7.2:40113787-40113806 | None:intergenic | 40.0% | |
| TGTTGCAGAAGTCTGTATTC+AGG | - | chr7.2:40116210-40116229 | MS.gene46177:intron | 40.0% | |
| TTTCTAAATTGAGTCAGGGC+TGG | - | chr7.2:40116091-40116110 | MS.gene46177:intron | 40.0% | |
| TTTGGTAGAGATAAAGAGCC+AGG | + | chr7.2:40116452-40116471 | None:intergenic | 40.0% | |
| ! | AAATGTTGTCTTCGGCTTGA+GGG | - | chr7.2:40114153-40114172 | MS.gene46177:intron | 40.0% |
| ! | CCTATGCAAGGTGATTTTGT+AGG | - | chr7.2:40114243-40114262 | MS.gene46177:intron | 40.0% |
| ! | GGTAATTAGCGGTTTGTTCA+AGG | - | chr7.2:40116301-40116320 | MS.gene46177:intron | 40.0% |
| ! | GTTTACTAGGTTGACTGGAT+CGG | - | chr7.2:40115585-40115604 | MS.gene46177:intron | 40.0% |
| ! | TAAATGTTGTCTTCGGCTTG+AGG | - | chr7.2:40114152-40114171 | MS.gene46177:intron | 40.0% |
| ! | TGATTTGGCATCAAAACCTG+AGG | - | chr7.2:40116583-40116602 | MS.gene46177:intron | 40.0% |
| !! | AAGAGTACTGTGCTTGTTAC+TGG | - | chr7.2:40113334-40113353 | MS.gene46177:CDS | 40.0% |
| !! | ACAGGCACTAAATTTTGAGG+AGG | - | chr7.2:40116544-40116563 | MS.gene46177:intron | 40.0% |
| !! | CCCGAGTTCTATTTTGAAGA+TGG | - | chr7.2:40115298-40115317 | MS.gene46177:intron | 40.0% |
| !! | GAGAGCATCTATACCTTGAA+TGG | + | chr7.2:40115215-40115234 | None:intergenic | 40.0% |
| !! | TCTAGCTATGGTTCTGATGT+CGG | + | chr7.2:40116185-40116204 | None:intergenic | 40.0% |
| !!! | CGATACTGTTTTTTCGAACC+CGG | + | chr7.2:40114376-40114395 | None:intergenic | 40.0% |
| AAGTTGTCCTGGAGAGCTTA+TGG | - | chr7.2:40115379-40115398 | MS.gene46177:intron | 45.0% | |
| AGTAAGCTCTCTCCAGTCAA+TGG | - | chr7.2:40116270-40116289 | MS.gene46177:intron | 45.0% | |
| CAAACGAATACGTCGCTAGA+GGG | - | chr7.2:40115098-40115117 | MS.gene46177:intron | 45.0% | |
| CACCCAAACTGTTCAAAGGA+TGG | + | chr7.2:40115790-40115809 | None:intergenic | 45.0% | |
| CAGTCAAGTGAGACTAATCG+CGG | + | chr7.2:40114461-40114480 | None:intergenic | 45.0% | |
| CCATCACCCAAACTGTTCAA+AGG | + | chr7.2:40115794-40115813 | None:intergenic | 45.0% | |
| CCTTTGAACAGTTTGGGTGA+TGG | - | chr7.2:40115791-40115810 | MS.gene46177:intron | 45.0% | |
| GAAAGACCTCTACCTATGCA+AGG | - | chr7.2:40114231-40114250 | MS.gene46177:CDS | 45.0% | |
| GAGCCTAATAGTACCTGTTC+AGG | + | chr7.2:40115331-40115350 | None:intergenic | 45.0% | |
| GATAGTATCATAGCCTGTCC+AGG | - | chr7.2:40114093-40114112 | MS.gene46177:intron | 45.0% | |
| GCATCTATACCTTGAATGGC+AGG | + | chr7.2:40115211-40115230 | None:intergenic | 45.0% | |
| GTATCCGAGAACTCGTCATA+GGG | - | chr7.2:40116137-40116156 | MS.gene46177:intron | 45.0% | |
| TCAGTGGTACTCCACTTGTA+AGG | + | chr7.2:40115243-40115262 | None:intergenic | 45.0% | |
| TCGAATCCAGGTTTCATCAG+TGG | + | chr7.2:40115259-40115278 | None:intergenic | 45.0% | |
| TCTCTCTTTCGGCCTCTAAT+TGG | - | chr7.2:40114613-40114632 | MS.gene46177:intron | 45.0% | |
| TGAATGACTCCCACTATAGC+AGG | + | chr7.2:40114122-40114141 | None:intergenic | 45.0% | |
| TGCAACATCAGGTCTAGCTA+TGG | + | chr7.2:40116197-40116216 | None:intergenic | 45.0% | |
| TGGTAGATCGCGGTAATTAG+CGG | - | chr7.2:40116290-40116309 | MS.gene46177:intron | 45.0% | |
| TTGAATCCTACAAAACCGGC+TGG | + | chr7.2:40114051-40114070 | None:intergenic | 45.0% | |
| ! | GGTGGTTTGCAAGACAAAGA+GGG | - | chr7.2:40116112-40116131 | MS.gene46177:intron | 45.0% |
| ! | TCGGGTCTTTTTCCTTGAGT+TGG | + | chr7.2:40115283-40115302 | None:intergenic | 45.0% |
| ! | TGGTGGTTTGCAAGACAAAG+AGG | - | chr7.2:40116111-40116130 | MS.gene46177:intron | 45.0% |
| !! | AGTCTTGTTCCTGCCATTCA+AGG | - | chr7.2:40115199-40115218 | MS.gene46177:intron | 45.0% |
| !!! | TGTCGGACACCGATTTTTTG+TGG | - | chr7.2:40113748-40113767 | MS.gene46177:intron | 45.0% |
| !! | ATTATTATATTTATATTTCA+AGG | - | chr7.2:40114917-40114936 | MS.gene46177:intron | 5.0% |
| ACATGAACAGCTAAGGCTGC+TGG | - | chr7.2:40115716-40115735 | MS.gene46177:intron | 50.0% | |
| AGACTAATCGCGGTTTGTGG+TGG | + | chr7.2:40114451-40114470 | None:intergenic | 50.0% | |
| AGATGGTGCATACCCTGAAC+AGG | - | chr7.2:40115315-40115334 | MS.gene46177:intron | 50.0% | |
| CCAAACGAATACGTCGCTAG+AGG | - | chr7.2:40115097-40115116 | MS.gene46177:intron | 50.0% | |
| CCTCTAGCGACGTATTCGTT+TGG | + | chr7.2:40115100-40115119 | None:intergenic | 50.0% | |
| CCTGGATTCGATCCAACTCA+AGG | - | chr7.2:40115268-40115287 | MS.gene46177:intron | 50.0% | |
| CCTTCCCTATGACGAGTTCT+CGG | + | chr7.2:40116144-40116163 | None:intergenic | 50.0% | |
| CTAAATTGAGTCAGGGCTGG+TGG | - | chr7.2:40116094-40116113 | MS.gene46177:intron | 50.0% | |
| CTCCAGTCAATGGTAGATCG+CGG | - | chr7.2:40116280-40116299 | MS.gene46177:intron | 50.0% | |
| GACTAATCGCGGTTTGTGGT+GGG | + | chr7.2:40114450-40114469 | None:intergenic | 50.0% | |
| GCATCAAAACCTGAGGGAAC+AGG | - | chr7.2:40116590-40116609 | MS.gene46177:intron | 50.0% | |
| GGCTCAAAAAGTTCTACGCC+TGG | - | chr7.2:40114938-40114957 | MS.gene46177:intron | 50.0% | |
| GGGAACAGGTTCACCAACAA+AGG | - | chr7.2:40116604-40116623 | MS.gene46177:intron | 50.0% | |
| GGTATCCGAGAACTCGTCAT+AGG | - | chr7.2:40116136-40116155 | MS.gene46177:intron | 50.0% | |
| GGTTTGCAAGACAAAGAGGG+AGG | - | chr7.2:40116115-40116134 | MS.gene46177:intron | 50.0% | |
| GTGAGACTAATCGCGGTTTG+TGG | + | chr7.2:40114454-40114473 | None:intergenic | 50.0% | |
| GTGTTAGTAGGGTCTATGGG+TGG | - | chr7.2:40115752-40115771 | MS.gene46177:intron | 50.0% | |
| TACCGCGATCTACCATTGAC+TGG | + | chr7.2:40116285-40116304 | None:intergenic | 50.0% | |
| TCCAGGTCACCTGCTATAGT+GGG | - | chr7.2:40114110-40114129 | MS.gene46177:intron | 50.0% | |
| ! | GGAGTACCACTGATGAAACC+TGG | - | chr7.2:40115250-40115269 | MS.gene46177:intron | 50.0% |
| !! | CCTTGAGTTGGATCGAATCC+AGG | + | chr7.2:40115271-40115290 | None:intergenic | 50.0% |
| CCGAGAACTCGTCATAGGGA+AGG | - | chr7.2:40116141-40116160 | MS.gene46177:intron | 55.0% | |
| CTATAGCAGGTGACCTGGAC+AGG | + | chr7.2:40114109-40114128 | None:intergenic | 55.0% | |
| GAATCTCTCGCTCTACCAGC+CGG | - | chr7.2:40114033-40114052 | MS.gene46177:CDS | 55.0% | |
| GTCCAGGTCACCTGCTATAG+TGG | - | chr7.2:40114109-40114128 | MS.gene46177:intron | 55.0% | |
| GTTGGGACACTCCTCGGATT+AGG | + | chr7.2:40113781-40113800 | None:intergenic | 55.0% | |
| TCCCACTATAGCAGGTGACC+TGG | + | chr7.2:40114114-40114133 | None:intergenic | 55.0% | |
| TGCTGCTGGTCGTACAGGTT+TGG | - | chr7.2:40113357-40113376 | MS.gene46177:CDS | 55.0% | |
| ! | GTTGGTGAACCTGTTCCCTC+AGG | + | chr7.2:40116602-40116621 | None:intergenic | 55.0% |
| !! | CAGTGTTGACGCATCGTGTG+TGG | + | chr7.2:40113680-40113699 | None:intergenic | 55.0% |
| !! | GCTCTACCAGCCGGTTTTGT+AGG | - | chr7.2:40114042-40114061 | MS.gene46177:CDS | 55.0% |
| !! | GTGCTTGTTACTGGTGCTGC+TGG | - | chr7.2:40113343-40113362 | MS.gene46177:CDS | 55.0% |
| !! | GTGGTGTCATGCCTAATCCG+AGG | - | chr7.2:40113767-40113786 | MS.gene46177:CDS | 55.0% |
| !! | ACTGGTGCTGCTGGTCGTAC+AGG | - | chr7.2:40113352-40113371 | MS.gene46177:CDS | 60.0% |
| !! | CGCGGTTTGTGGTGGGCTTG+TGG | + | chr7.2:40114443-40114462 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 40113319 | 40116667 | 40113319 | ID=MS.gene46177 |
| chr7.2 | mRNA | 40113319 | 40116667 | 40113319 | ID=MS.gene46177.t1;Parent=MS.gene46177 |
| chr7.2 | exon | 40116613 | 40116667 | 40116613 | ID=MS.gene46177.t1.exon1;Parent=MS.gene46177.t1 |
| chr7.2 | CDS | 40116613 | 40116667 | 40116613 | ID=cds.MS.gene46177.t1;Parent=MS.gene46177.t1 |
| chr7.2 | exon | 40114650 | 40114921 | 40114650 | ID=MS.gene46177.t1.exon2;Parent=MS.gene46177.t1 |
| chr7.2 | CDS | 40114650 | 40114921 | 40114650 | ID=cds.MS.gene46177.t1;Parent=MS.gene46177.t1 |
| chr7.2 | exon | 40114356 | 40114392 | 40114356 | ID=MS.gene46177.t1.exon3;Parent=MS.gene46177.t1 |
| chr7.2 | CDS | 40114356 | 40114392 | 40114356 | ID=cds.MS.gene46177.t1;Parent=MS.gene46177.t1 |
| chr7.2 | exon | 40114163 | 40114260 | 40114163 | ID=MS.gene46177.t1.exon4;Parent=MS.gene46177.t1 |
| chr7.2 | CDS | 40114163 | 40114260 | 40114163 | ID=cds.MS.gene46177.t1;Parent=MS.gene46177.t1 |
| chr7.2 | exon | 40114003 | 40114064 | 40114003 | ID=MS.gene46177.t1.exon5;Parent=MS.gene46177.t1 |
| chr7.2 | CDS | 40114003 | 40114064 | 40114003 | ID=cds.MS.gene46177.t1;Parent=MS.gene46177.t1 |
| chr7.2 | exon | 40113755 | 40113878 | 40113755 | ID=MS.gene46177.t1.exon6;Parent=MS.gene46177.t1 |
| chr7.2 | CDS | 40113755 | 40113878 | 40113755 | ID=cds.MS.gene46177.t1;Parent=MS.gene46177.t1 |
| chr7.2 | exon | 40113319 | 40113438 | 40113319 | ID=MS.gene46177.t1.exon7;Parent=MS.gene46177.t1 |
| chr7.2 | CDS | 40113319 | 40113438 | 40113319 | ID=cds.MS.gene46177.t1;Parent=MS.gene46177.t1 |
| Gene Sequence |
| Protein sequence |
