Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48445.t1 | XP_003602964.2 | 99.1 | 543 | 4 | 1 | 1 | 543 | 1 | 542 | 0.00E+00 | 1081.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48445.t1 | Q9FYR6 | 81.6 | 543 | 94 | 4 | 3 | 543 | 5 | 543 | 1.4e-258 | 893.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48445.t1 | G7J5P9 | 99.1 | 543 | 4 | 1 | 1 | 543 | 1 | 542 | 0.0e+00 | 1081.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049173 | MS.gene48445 | 0.827448 | 1.56E-54 | -1.69E-46 |
MS.gene049217 | MS.gene48445 | 0.871458 | 6.73E-67 | -1.69E-46 |
MS.gene049222 | MS.gene48445 | 0.814539 | 1.46E-51 | -1.69E-46 |
MS.gene049285 | MS.gene48445 | 0.830428 | 2.95E-55 | -1.69E-46 |
MS.gene049320 | MS.gene48445 | 0.808009 | 3.82E-50 | -1.69E-46 |
MS.gene049351 | MS.gene48445 | 0.814329 | 1.63E-51 | -1.69E-46 |
MS.gene049369 | MS.gene48445 | 0.825118 | 5.58E-54 | -1.69E-46 |
MS.gene049427 | MS.gene48445 | 0.838128 | 3.46E-57 | -1.69E-46 |
MS.gene049491 | MS.gene48445 | 0.806151 | 9.46E-50 | -1.69E-46 |
MS.gene049614 | MS.gene48445 | 0.867602 | 1.21E-65 | -1.69E-46 |
MS.gene049805 | MS.gene48445 | 0.812211 | 4.75E-51 | -1.69E-46 |
MS.gene049828 | MS.gene48445 | 0.828401 | 9.18E-55 | -1.69E-46 |
MS.gene050163 | MS.gene48445 | 0.862869 | 3.73E-64 | -1.69E-46 |
MS.gene050165 | MS.gene48445 | 0.856908 | 2.34E-62 | -1.69E-46 |
MS.gene050333 | MS.gene48445 | 0.867137 | 1.71E-65 | -1.69E-46 |
MS.gene050444 | MS.gene48445 | 0.813177 | 2.92E-51 | -1.69E-46 |
MS.gene050675 | MS.gene48445 | 0.80733 | 5.33E-50 | -1.69E-46 |
MS.gene050767 | MS.gene48445 | 0.875088 | 4.06E-68 | -1.69E-46 |
MS.gene050770 | MS.gene48445 | 0.879547 | 1.14E-69 | -1.69E-46 |
MS.gene050772 | MS.gene48445 | 0.832186 | 1.09E-55 | -1.69E-46 |
MS.gene05100 | MS.gene48445 | 0.831669 | 1.46E-55 | -1.69E-46 |
MS.gene05101 | MS.gene48445 | 0.816797 | 4.59E-52 | -1.69E-46 |
MS.gene051228 | MS.gene48445 | 0.835555 | 1.57E-56 | -1.69E-46 |
MS.gene051434 | MS.gene48445 | 0.812 | 5.28E-51 | -1.69E-46 |
MS.gene051692 | MS.gene48445 | 0.819161 | 1.34E-52 | -1.69E-46 |
MS.gene051694 | MS.gene48445 | 0.821153 | 4.70E-53 | -1.69E-46 |
MS.gene051810 | MS.gene48445 | 0.850224 | 1.95E-60 | -1.69E-46 |
MS.gene051858 | MS.gene48445 | 0.872255 | 3.66E-67 | -1.69E-46 |
MS.gene051949 | MS.gene48445 | 0.818783 | 1.64E-52 | -1.69E-46 |
MS.gene052271 | MS.gene48445 | 0.886478 | 3.30E-72 | -1.69E-46 |
MS.gene052290 | MS.gene48445 | 0.836481 | 9.13E-57 | -1.69E-46 |
MS.gene052326 | MS.gene48445 | 0.812109 | 5.00E-51 | -1.69E-46 |
MS.gene052379 | MS.gene48445 | 0.868088 | 8.47E-66 | -1.69E-46 |
MS.gene052484 | MS.gene48445 | 0.808869 | 2.51E-50 | -1.69E-46 |
MS.gene052615 | MS.gene48445 | 0.803428 | 3.50E-49 | -1.69E-46 |
MS.gene052670 | MS.gene48445 | 0.80165 | 8.15E-49 | -1.69E-46 |
MS.gene052916 | MS.gene48445 | 0.816022 | 6.85E-52 | -1.69E-46 |
MS.gene053009 | MS.gene48445 | 0.831999 | 1.21E-55 | -1.69E-46 |
MS.gene053207 | MS.gene48445 | 0.807845 | 4.14E-50 | -1.69E-46 |
MS.gene053213 | MS.gene48445 | 0.822064 | 2.89E-53 | -1.69E-46 |
MS.gene053286 | MS.gene48445 | 0.812922 | 3.32E-51 | -1.69E-46 |
MS.gene053322 | MS.gene48445 | 0.875372 | 3.25E-68 | -1.69E-46 |
MS.gene053384 | MS.gene48445 | 0.839748 | 1.32E-57 | -1.69E-46 |
MS.gene053632 | MS.gene48445 | 0.831568 | 1.55E-55 | -1.69E-46 |
MS.gene053813 | MS.gene48445 | 0.833158 | 6.26E-56 | -1.69E-46 |
MS.gene054376 | MS.gene48445 | 0.854392 | 1.27E-61 | -1.69E-46 |
MS.gene054600 | MS.gene48445 | 0.819959 | 8.83E-53 | -1.69E-46 |
MS.gene054642 | MS.gene48445 | 0.834941 | 2.24E-56 | -1.69E-46 |
MS.gene054802 | MS.gene48445 | 0.865019 | 8.00E-65 | -1.69E-46 |
MS.gene054803 | MS.gene48445 | 0.866247 | 3.28E-65 | -1.69E-46 |
MS.gene054804 | MS.gene48445 | 0.867963 | 9.28E-66 | -1.69E-46 |
MS.gene054955 | MS.gene48445 | 0.801142 | 1.04E-48 | -1.69E-46 |
MS.gene05505 | MS.gene48445 | 0.827388 | 1.61E-54 | -1.69E-46 |
MS.gene055206 | MS.gene48445 | 0.803564 | 3.28E-49 | -1.69E-46 |
MS.gene055254 | MS.gene48445 | 0.837755 | 4.31E-57 | -1.69E-46 |
MS.gene055362 | MS.gene48445 | 0.801595 | 8.36E-49 | -1.69E-46 |
MS.gene055397 | MS.gene48445 | 0.884328 | 2.11E-71 | -1.69E-46 |
MS.gene055412 | MS.gene48445 | 0.806488 | 8.03E-50 | -1.69E-46 |
MS.gene055499 | MS.gene48445 | 0.887315 | 1.59E-72 | -1.69E-46 |
MS.gene055502 | MS.gene48445 | 0.802871 | 4.57E-49 | -1.69E-46 |
MS.gene055633 | MS.gene48445 | 0.813241 | 2.83E-51 | -1.69E-46 |
MS.gene055636 | MS.gene48445 | 0.868217 | 7.70E-66 | -1.69E-46 |
MS.gene055638 | MS.gene48445 | 0.870101 | 1.88E-66 | -1.69E-46 |
MS.gene055647 | MS.gene48445 | 0.853346 | 2.54E-61 | -1.69E-46 |
MS.gene055722 | MS.gene48445 | 0.850821 | 1.33E-60 | -1.69E-46 |
MS.gene05592 | MS.gene48445 | 0.831584 | 1.54E-55 | -1.69E-46 |
MS.gene055941 | MS.gene48445 | 0.829982 | 3.80E-55 | -1.69E-46 |
MS.gene056083 | MS.gene48445 | 0.81661 | 5.06E-52 | -1.69E-46 |
MS.gene056374 | MS.gene48445 | 0.830815 | 2.37E-55 | -1.69E-46 |
MS.gene056410 | MS.gene48445 | 0.828882 | 7.02E-55 | -1.69E-46 |
MS.gene056449 | MS.gene48445 | 0.846761 | 1.77E-59 | -1.69E-46 |
MS.gene056549 | MS.gene48445 | 0.856379 | 3.35E-62 | -1.69E-46 |
MS.gene056609 | MS.gene48445 | 0.859214 | 4.83E-63 | -1.69E-46 |
MS.gene056611 | MS.gene48445 | 0.838929 | 2.15E-57 | -1.69E-46 |
MS.gene056657 | MS.gene48445 | 0.828163 | 1.05E-54 | -1.69E-46 |
MS.gene056903 | MS.gene48445 | 0.816977 | 4.19E-52 | -1.69E-46 |
MS.gene057011 | MS.gene48445 | 0.806204 | 9.21E-50 | -1.69E-46 |
MS.gene057129 | MS.gene48445 | 0.880034 | 7.65E-70 | -1.69E-46 |
MS.gene057146 | MS.gene48445 | 0.846375 | 2.26E-59 | -1.69E-46 |
MS.gene057285 | MS.gene48445 | 0.818242 | 2.17E-52 | -1.69E-46 |
MS.gene057295 | MS.gene48445 | 0.806541 | 7.82E-50 | -1.69E-46 |
MS.gene057331 | MS.gene48445 | 0.801627 | 8.24E-49 | -1.69E-46 |
MS.gene057416 | MS.gene48445 | 0.82126 | 4.44E-53 | -1.69E-46 |
MS.gene057926 | MS.gene48445 | 0.820653 | 6.12E-53 | -1.69E-46 |
MS.gene058006 | MS.gene48445 | 0.803314 | 3.70E-49 | -1.69E-46 |
MS.gene058019 | MS.gene48445 | 0.812027 | 5.21E-51 | -1.69E-46 |
MS.gene058293 | MS.gene48445 | 0.80635 | 8.59E-50 | -1.69E-46 |
MS.gene058323 | MS.gene48445 | 0.823501 | 1.34E-53 | -1.69E-46 |
MS.gene058419 | MS.gene48445 | 0.81768 | 2.91E-52 | -1.69E-46 |
MS.gene058660 | MS.gene48445 | 0.846232 | 2.47E-59 | -1.69E-46 |
MS.gene058723 | MS.gene48445 | 0.819113 | 1.38E-52 | -1.69E-46 |
MS.gene058773 | MS.gene48445 | 0.821036 | 5.00E-53 | -1.69E-46 |
MS.gene058903 | MS.gene48445 | 0.817316 | 3.51E-52 | -1.69E-46 |
MS.gene058993 | MS.gene48445 | 0.814831 | 1.26E-51 | -1.69E-46 |
MS.gene059022 | MS.gene48445 | 0.803632 | 3.18E-49 | -1.69E-46 |
MS.gene059029 | MS.gene48445 | 0.85822 | 9.57E-63 | -1.69E-46 |
MS.gene05913 | MS.gene48445 | 0.8029 | 4.50E-49 | -1.69E-46 |
MS.gene05934 | MS.gene48445 | 0.812256 | 4.65E-51 | -1.69E-46 |
MS.gene059536 | MS.gene48445 | 0.849695 | 2.74E-60 | -1.69E-46 |
MS.gene059539 | MS.gene48445 | 0.802193 | 6.30E-49 | -1.69E-46 |
MS.gene059676 | MS.gene48445 | 0.815189 | 1.05E-51 | -1.69E-46 |
MS.gene059677 | MS.gene48445 | 0.81788 | 2.62E-52 | -1.69E-46 |
MS.gene059692 | MS.gene48445 | 0.801693 | 7.98E-49 | -1.69E-46 |
MS.gene059695 | MS.gene48445 | 0.803538 | 3.32E-49 | -1.69E-46 |
MS.gene059711 | MS.gene48445 | 0.814058 | 1.87E-51 | -1.69E-46 |
MS.gene059718 | MS.gene48445 | 0.81828 | 2.13E-52 | -1.69E-46 |
MS.gene059858 | MS.gene48445 | 0.817188 | 3.75E-52 | -1.69E-46 |
MS.gene05986 | MS.gene48445 | 0.823618 | 1.26E-53 | -1.69E-46 |
MS.gene059902 | MS.gene48445 | 0.863505 | 2.37E-64 | -1.69E-46 |
MS.gene059960 | MS.gene48445 | 0.88062 | 4.73E-70 | -1.69E-46 |
MS.gene060193 | MS.gene48445 | 0.835085 | 2.06E-56 | -1.69E-46 |
MS.gene060356 | MS.gene48445 | 0.814576 | 1.44E-51 | -1.69E-46 |
MS.gene060804 | MS.gene48445 | 0.829359 | 5.38E-55 | -1.69E-46 |
MS.gene060818 | MS.gene48445 | 0.858966 | 5.73E-63 | -1.69E-46 |
MS.gene061041 | MS.gene48445 | 0.824643 | 7.22E-54 | -1.69E-46 |
MS.gene061134 | MS.gene48445 | 0.809088 | 2.25E-50 | -1.69E-46 |
MS.gene061150 | MS.gene48445 | 0.815554 | 8.71E-52 | -1.69E-46 |
MS.gene061171 | MS.gene48445 | 0.842511 | 2.47E-58 | -1.69E-46 |
MS.gene061200 | MS.gene48445 | 0.909574 | 4.90E-82 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene071560 | MS.gene48445 | PPI |
MS.gene028619 | MS.gene48445 | PPI |
MS.gene48445 | MS.gene31184 | PPI |
MS.gene34266 | MS.gene48445 | PPI |
MS.gene48445 | MS.gene28632 | PPI |
MS.gene48445 | MS.gene47768 | PPI |
MS.gene30927 | MS.gene48445 | PPI |
MS.gene072641 | MS.gene48445 | PPI |
MS.gene48445 | MS.gene050838 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48445.t1 | MTR_3g100910 | 99.079 | 543 | 4 | 1 | 1 | 543 | 1 | 542 | 0.0 | 1112 |
MS.gene48445.t1 | MTR_7g110660 | 40.909 | 484 | 271 | 6 | 69 | 543 | 52 | 529 | 1.03e-135 | 404 |
MS.gene48445.t1 | MTR_7g110660 | 40.909 | 484 | 271 | 6 | 69 | 543 | 139 | 616 | 3.63e-135 | 406 |
MS.gene48445.t1 | MTR_3g114570 | 38.571 | 490 | 284 | 6 | 64 | 543 | 6 | 488 | 1.10e-121 | 367 |
MS.gene48445.t1 | MTR_3g048190 | 36.489 | 507 | 301 | 7 | 51 | 543 | 2 | 501 | 2.25e-107 | 330 |
MS.gene48445.t1 | MTR_3g048190 | 36.939 | 490 | 292 | 6 | 64 | 543 | 12 | 494 | 3.12e-107 | 330 |
MS.gene48445.t1 | MTR_3g114550 | 41.949 | 236 | 100 | 4 | 124 | 358 | 5 | 204 | 4.58e-57 | 191 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene48445.t1 | AT5G52520 | 81.584 | 543 | 94 | 4 | 3 | 543 | 5 | 543 | 0.0 | 902 |
MS.gene48445.t1 | AT3G62120 | 40.909 | 484 | 270 | 8 | 69 | 543 | 41 | 517 | 2.68e-129 | 387 |
MS.gene48445.t1 | AT3G62120 | 40.909 | 484 | 270 | 8 | 69 | 543 | 54 | 530 | 3.77e-129 | 387 |
MS.gene48445.t1 | AT3G62120 | 40.909 | 484 | 270 | 8 | 69 | 543 | 54 | 530 | 3.77e-129 | 387 |
MS.gene48445.t1 | AT5G10880 | 36.245 | 229 | 125 | 5 | 329 | 543 | 88 | 309 | 1.89e-30 | 121 |
Find 153 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTATGGAGCCTTCAATTT+TGG | 0.135831 | 3.1:-80123835 | MS.gene48445:CDS |
CTGGATGGAAATTCAATTTC+TGG | 0.137157 | 3.1:-80124102 | MS.gene48445:CDS |
CGCCATTTGGGAAGCCATTC+AGG | 0.220881 | 3.1:-80128578 | MS.gene48445:intron |
TCATCATCCTTCTTCCAAAT+TGG | 0.238394 | 3.1:+80124220 | None:intergenic |
CGAGTTGTCGACTCGGTCTT+TGG | 0.241888 | 3.1:+80128738 | None:intergenic |
CGAGATACAGTCTTCTCTTT+TGG | 0.245617 | 3.1:-80123787 | MS.gene48445:CDS |
TTAGAACTCTTGAATTTCTT+TGG | 0.246752 | 3.1:-80126976 | MS.gene48445:CDS |
ACTTGCTTCTTTCTCTATAA+AGG | 0.261830 | 3.1:+80127467 | None:intergenic |
CAAAGGCACGGGAAAAGTTT+TGG | 0.265297 | 3.1:+80126640 | None:intergenic |
GGTCTCTGCTGCAGTGGTTT+TGG | 0.279209 | 3.1:+80128759 | None:intergenic |
CTTGCAGAGTTAGTAAGATT+TGG | 0.279485 | 3.1:+80123003 | None:intergenic |
GTCCCTATGGTTACGCCATT+TGG | 0.281205 | 3.1:-80128591 | MS.gene48445:CDS |
ATGGACAAAGGGAATATATT+TGG | 0.290677 | 3.1:-80125507 | MS.gene48445:CDS |
ACCTGTATCGGTGCAATCTT+TGG | 0.300338 | 3.1:+80125403 | None:intergenic |
GTTCCTCTTAGAATTGAAAT+TGG | 0.310395 | 3.1:-80123936 | MS.gene48445:CDS |
CGGCGGTGGCGGAGAATGAT+TGG | 0.327896 | 3.1:+80128811 | None:intergenic |
ATCCCTTGTGGCTGTTCAAA+TGG | 0.354235 | 3.1:+80123076 | None:intergenic |
GGGCAATTGCATTTCGAGAT+AGG | 0.356660 | 3.1:-80123761 | MS.gene48445:intron |
AGGTGGTAATTGTACCAATT+TGG | 0.362681 | 3.1:-80124234 | MS.gene48445:CDS |
CAAGGGGCCCTTGGTCTGCT+AGG | 0.366722 | 3.1:-80123273 | MS.gene48445:intron |
AGCTGCCATACCTGTTATTA+CGG | 0.369384 | 3.1:-80126772 | MS.gene48445:CDS |
CTTGAATTTCTTTGGCAAGA+AGG | 0.374606 | 3.1:-80126968 | MS.gene48445:CDS |
AACACTTTCCCTTGCTTCCC+AGG | 0.380427 | 3.1:+80123864 | None:intergenic |
GTGCAGTTCACAGATGAAAA+TGG | 0.386375 | 3.1:-80125526 | MS.gene48445:intron |
GGCGGTGGCGGAGAATGATT+GGG | 0.387864 | 3.1:+80128812 | None:intergenic |
TCTTCCTCTCTTGATTAATC+AGG | 0.388403 | 3.1:-80127139 | MS.gene48445:intron |
TCCCTATGGTTACGCCATTT+GGG | 0.391559 | 3.1:-80128590 | MS.gene48445:CDS |
TCCAAAGATTGCACCGATAC+AGG | 0.393092 | 3.1:-80125404 | MS.gene48445:intron |
TTCACAATGGTTTCACTTGT+AGG | 0.397403 | 3.1:+80127198 | None:intergenic |
GAAAGTGTTTGGAATCTCTA+TGG | 0.397700 | 3.1:-80123850 | MS.gene48445:CDS |
AGGAAACTGGAGCAACTATC+AGG | 0.398901 | 3.1:-80123105 | MS.gene48445:CDS |
CTGCAATATCACAAGGCAAA+TGG | 0.399141 | 3.1:-80123297 | MS.gene48445:CDS |
CAATCTTTGGAGGAAGCATT+AGG | 0.399281 | 3.1:+80125416 | None:intergenic |
AGTTAGCAGTAGTGACAATT+GGG | 0.403138 | 3.1:-80127422 | MS.gene48445:CDS |
AGCTTGTTCAAAAGCAAATC+TGG | 0.405332 | 3.1:+80126791 | None:intergenic |
ATTCAATTTCTGGGAAATGA+AGG | 0.410990 | 3.1:-80124092 | MS.gene48445:intron |
CGGACCGTAATCTGCTAATT+CGG | 0.418329 | 3.1:+80128636 | None:intergenic |
GCAAATGGGCAAGGGGCCCT+TGG | 0.418567 | 3.1:-80123282 | MS.gene48445:CDS |
AATATATTTGGCAGACATCA+TGG | 0.419041 | 3.1:-80125495 | MS.gene48445:CDS |
GGGAAGCAAGGGAAAGTGTT+TGG | 0.420165 | 3.1:-80123861 | MS.gene48445:CDS |
TTAAAAGTGAAAGAGGAAAC+TGG | 0.421097 | 3.1:-80123118 | MS.gene48445:CDS |
CAGAAATTGAATTTCCATCC+AGG | 0.425508 | 3.1:+80124103 | None:intergenic |
ATAACCATTGTACCGCGAAC+CGG | 0.425988 | 3.1:+80128616 | None:intergenic |
TGGATGGAAATTCAATTTCT+GGG | 0.428325 | 3.1:-80124101 | MS.gene48445:CDS |
ACATACACCTCCAAAATTGA+AGG | 0.437424 | 3.1:+80123825 | None:intergenic |
TGCAATATCACAAGGCAAAT+GGG | 0.439132 | 3.1:-80123296 | MS.gene48445:CDS |
AATTCAAGAGTTCTAACAAA+TGG | 0.442257 | 3.1:+80126983 | None:intergenic |
GAGTTAGCAGTAGTGACAAT+TGG | 0.442737 | 3.1:-80127423 | MS.gene48445:CDS |
TGAAAGGTTGGTGACGGCGG+TGG | 0.445524 | 3.1:+80128797 | None:intergenic |
AATGTCAAGTTCAAGGAGAC+TGG | 0.459172 | 3.1:-80128455 | MS.gene48445:CDS |
TCTAAAGTGGAAACATTTGC+TGG | 0.460420 | 3.1:-80126741 | MS.gene48445:CDS |
GTGGAAGTGTGGTGATATCC+AGG | 0.467177 | 3.1:-80123896 | MS.gene48445:CDS |
ATTAAAAGATGTTTGATGAC+AGG | 0.474053 | 3.1:-80123055 | MS.gene48445:CDS |
ACAATGGTTATTCGTCCCTA+TGG | 0.476175 | 3.1:-80128604 | MS.gene48445:CDS |
TCTTTCTCTATAAAGGAGTA+AGG | 0.477392 | 3.1:+80127474 | None:intergenic |
AGATGAGTTAAAAGTGAAAG+AGG | 0.477450 | 3.1:-80123125 | MS.gene48445:CDS |
AATTGTACCAATTTGGAAGA+AGG | 0.481601 | 3.1:-80124227 | MS.gene48445:CDS |
CTTCCCAGGAATATCTCTCC+TGG | 0.482230 | 3.1:+80123878 | None:intergenic |
CACAGATGAAAATGGACAAA+GGG | 0.483190 | 3.1:-80125518 | MS.gene48445:CDS |
AAAGAAGCTCTTCAAAGCTC+TGG | 0.483538 | 3.1:-80124163 | MS.gene48445:CDS |
CACTTCCACTAGACACGTCC+CGG | 0.484364 | 3.1:+80123910 | None:intergenic |
TTATTTGAATGTCAAGTTCA+AGG | 0.486269 | 3.1:-80128462 | MS.gene48445:CDS |
AAGGTTGGTGACGGCGGTGG+CGG | 0.488368 | 3.1:+80128800 | None:intergenic |
CTAGGCGTGATGACTCGGTC+GGG | 0.491484 | 3.1:+80128703 | None:intergenic |
AACCTGAATGGCTTCCCAAA+TGG | 0.497397 | 3.1:+80128576 | None:intergenic |
GCAGATTACGGTCCGGTTCG+CGG | 0.498963 | 3.1:-80128628 | MS.gene48445:CDS |
GCTGCCATACCTGTTATTAC+GGG | 0.500792 | 3.1:-80126771 | MS.gene48445:CDS |
TGAGAAATTGCTGTTGTTGA+GGG | 0.506381 | 3.1:+80128841 | None:intergenic |
GGACCAATTTCAATTCTAAG+AGG | 0.507990 | 3.1:+80123933 | None:intergenic |
CTACACGATTGAGGCAATGA+TGG | 0.509021 | 3.1:-80126706 | MS.gene48445:CDS |
GAGGAAGATCACGGTAGCTA+TGG | 0.509612 | 3.1:+80127154 | None:intergenic |
GACTCAGATCAAAGAACCCC+TGG | 0.510899 | 3.1:-80124121 | MS.gene48445:CDS |
AAAGAAGCAAGTCATGTTGA+GGG | 0.511967 | 3.1:-80127456 | MS.gene48445:CDS |
AAAATAGCCACTTCTTCAGC+AGG | 0.513654 | 3.1:+80123028 | None:intergenic |
AGAGATATTCCTGGGAAGCA+AGG | 0.516068 | 3.1:-80123873 | MS.gene48445:CDS |
AGTCATCACGCCTAGGTCAC+AGG | 0.518342 | 3.1:-80128695 | MS.gene48445:CDS |
AGAAGGTGGCGGTGAAAGGT+TGG | 0.519073 | 3.1:+80128785 | None:intergenic |
GCGGAGAAGGTGGCGGTGAA+AGG | 0.520115 | 3.1:+80128781 | None:intergenic |
GGTGTATGTTAAAGACAAGT+TGG | 0.524044 | 3.1:-80123811 | MS.gene48445:CDS |
TAGAATTGAAATTGGTCCCC+GGG | 0.525862 | 3.1:-80123928 | MS.gene48445:CDS |
TTCCCAAATGGCGTAACCAT+AGG | 0.529134 | 3.1:+80128588 | None:intergenic |
AATGCCGAATTAGCAGATTA+CGG | 0.529226 | 3.1:-80128640 | MS.gene48445:CDS |
GAGAAATTGCTGTTGTTGAG+GGG | 0.535670 | 3.1:+80128842 | None:intergenic |
TATCACAAGGCAAATGGGCA+AGG | 0.539052 | 3.1:-80123291 | MS.gene48445:CDS |
TCGACCCGTAATAACAGGTA+TGG | 0.539172 | 3.1:+80126767 | None:intergenic |
TCCAGAAGAGGCAGAAAATG+AGG | 0.539198 | 3.1:-80126927 | MS.gene48445:intron |
GTCTTTGGTCTCTGCTGCAG+TGG | 0.539852 | 3.1:+80128753 | None:intergenic |
GTAATCTGCTAATTCGGCAT+TGG | 0.539992 | 3.1:+80128642 | None:intergenic |
GCATTGAAGTCCTGTGACCT+AGG | 0.540148 | 3.1:+80128685 | None:intergenic |
GTGACCTAGGCGTGATGACT+CGG | 0.541090 | 3.1:+80128698 | None:intergenic |
TCCCAAATGGCGTAACCATA+GGG | 0.541410 | 3.1:+80128589 | None:intergenic |
AGAAATTGAATTTCCATCCA+GGG | 0.544417 | 3.1:+80124104 | None:intergenic |
AGAAATTGCTGTTGTTGAGG+GGG | 0.546767 | 3.1:+80128843 | None:intergenic |
TGTATCGGTGCAATCTTTGG+AGG | 0.548894 | 3.1:+80125406 | None:intergenic |
TACGGGTCGAAAATCTAAAG+TGG | 0.549532 | 3.1:-80126754 | MS.gene48445:CDS |
GAAAGAAGCAAGTCATGTTG+AGG | 0.549877 | 3.1:-80127457 | MS.gene48445:CDS |
AGTGGGCAAATGTCACAAGA+TGG | 0.552413 | 3.1:-80127021 | MS.gene48445:CDS |
TTCCCGTGCCTTTGAAACAC+AGG | 0.553524 | 3.1:-80126631 | MS.gene48445:intron |
GACAAGAAAGCATTGCAAGC+AGG | 0.555118 | 3.1:-80126681 | MS.gene48445:CDS |
ATCACAAGGCAAATGGGCAA+GGG | 0.555350 | 3.1:-80123290 | MS.gene48445:CDS |
GCATCAGACCTGTGTTTCAA+AGG | 0.556209 | 3.1:+80126623 | None:intergenic |
TGCTCATGCAACTCCAGAAG+AGG | 0.559996 | 3.1:-80126939 | MS.gene48445:CDS |
GCATCCAACCATACCTGTAT+CGG | 0.561155 | 3.1:+80125391 | None:intergenic |
AGACCTGTGTTTCAAAGGCA+CGG | 0.561432 | 3.1:+80126628 | None:intergenic |
GACCTGTGTTTCAAAGGCAC+GGG | 0.565333 | 3.1:+80126629 | None:intergenic |
GAGATATTCCTGGGAAGCAA+GGG | 0.565396 | 3.1:-80123872 | MS.gene48445:CDS |
GGTCCCCGGGACGTGTCTAG+TGG | 0.566931 | 3.1:-80123915 | MS.gene48445:CDS |
GGAGGCATCATCATGGTACA+TGG | 0.569062 | 3.1:-80125451 | MS.gene48445:CDS |
GAAATTGAATTTCCATCCAG+GGG | 0.569742 | 3.1:+80124105 | None:intergenic |
CAATGGTTTCACTTGTAGGT+CGG | 0.569797 | 3.1:+80127202 | None:intergenic |
TTAGAATTGAAATTGGTCCC+CGG | 0.570679 | 3.1:-80123929 | MS.gene48445:CDS |
ACTTCCACTAGACACGTCCC+GGG | 0.571135 | 3.1:+80123911 | None:intergenic |
ATATCCAGGAGAGATATTCC+TGG | 0.571372 | 3.1:-80123882 | MS.gene48445:CDS |
AGGAGATCCTGCTGAAGAAG+TGG | 0.571589 | 3.1:-80123035 | MS.gene48445:CDS |
CGGTGAAAGGTTGGTGACGG+CGG | 0.571786 | 3.1:+80128794 | None:intergenic |
GTGGGCAAATGTCACAAGAT+GGG | 0.573271 | 3.1:-80127020 | MS.gene48445:CDS |
TAGGCGTGATGACTCGGTCG+GGG | 0.576073 | 3.1:+80128704 | None:intergenic |
GCAGGAACCAGCCACAACCT+TGG | 0.576341 | 3.1:-80126663 | MS.gene48445:CDS |
GTGAGAAATTGCTGTTGTTG+AGG | 0.578924 | 3.1:+80128840 | None:intergenic |
ATATATTTGGCAGACATCAT+GGG | 0.579832 | 3.1:-80125494 | MS.gene48445:CDS |
CGGTCCGGTTCGCGGTACAA+TGG | 0.585347 | 3.1:-80128620 | MS.gene48445:CDS |
TTTACCTGATTAATCAAGAG+AGG | 0.586404 | 3.1:+80127135 | None:intergenic |
ATTGTCACTACTGCTAACTC+TGG | 0.591910 | 3.1:+80127426 | None:intergenic |
CAGATCAAAGAACCCCTGGA+TGG | 0.591928 | 3.1:-80124117 | MS.gene48445:CDS |
TATCCAGGAGAGATATTCCT+GGG | 0.592768 | 3.1:-80123881 | MS.gene48445:CDS |
TACACGATTGAGGCAATGAT+GGG | 0.595098 | 3.1:-80126705 | MS.gene48445:CDS |
CGAATTAGCAGATTACGGTC+CGG | 0.596537 | 3.1:-80128635 | MS.gene48445:CDS |
TCACAAGGCAAATGGGCAAG+GGG | 0.599892 | 3.1:-80123289 | MS.gene48445:CDS |
CTTAAATCTGCAATATCACA+AGG | 0.602226 | 3.1:-80123304 | MS.gene48445:CDS |
TCACAGATGAAAATGGACAA+AGG | 0.608406 | 3.1:-80125519 | MS.gene48445:CDS |
TTCCATTTGAACAGCCACAA+GGG | 0.611470 | 3.1:-80123078 | MS.gene48445:CDS |
CCTAGGCGTGATGACTCGGT+CGG | 0.612301 | 3.1:+80128702 | None:intergenic |
TTTCCATTTGAACAGCCACA+AGG | 0.612338 | 3.1:-80123079 | MS.gene48445:CDS |
TTGTAAGACCTACACGATTG+AGG | 0.616283 | 3.1:-80126715 | MS.gene48445:CDS |
ATGGTACATGGAGATGATGC+TGG | 0.617498 | 3.1:-80125439 | MS.gene48445:CDS |
TGGCGGTGAAAGGTTGGTGA+CGG | 0.625593 | 3.1:+80128791 | None:intergenic |
GGCGGAGAATGATTGGGGAA+CGG | 0.627567 | 3.1:+80128818 | None:intergenic |
AACACAACCTAGCAGACCAA+GGG | 0.628350 | 3.1:+80123266 | None:intergenic |
AGTAAACATGTGATTCACAA+TGG | 0.630715 | 3.1:+80127185 | None:intergenic |
CATCATTGCCTCAATCGTGT+AGG | 0.631552 | 3.1:+80126707 | None:intergenic |
TGAATCACATGTTTACTCAG+TGG | 0.643424 | 3.1:-80127179 | MS.gene48445:CDS |
GATTCTTCGAGTTGTCGACT+CGG | 0.646760 | 3.1:+80128731 | None:intergenic |
AAACACAACCTAGCAGACCA+AGG | 0.647106 | 3.1:+80123265 | None:intergenic |
TAATCAAGAGAGGAAGATCA+CGG | 0.658472 | 3.1:+80127145 | None:intergenic |
CCGACCGAGTCATCACGCCT+AGG | 0.658930 | 3.1:-80128702 | MS.gene48445:CDS |
GTTAGCAGTAGTGACAATTG+GGG | 0.660405 | 3.1:-80127421 | MS.gene48445:CDS |
GGACGTGTCTAGTGGAAGTG+TGG | 0.684037 | 3.1:-80123907 | MS.gene48445:CDS |
GCGGTGGCGGAGAATGATTG+GGG | 0.684633 | 3.1:+80128813 | None:intergenic |
GGAACTTGAAGAGAAGCTCG+TGG | 0.700042 | 3.1:-80127391 | MS.gene48445:intron |
CTTCCACTAGACACGTCCCG+GGG | 0.711499 | 3.1:+80123912 | None:intergenic |
TATTTGGCAGACATCATGGG+CGG | 0.711856 | 3.1:-80125491 | MS.gene48445:CDS |
TTAGCAGTAGTGACAATTGG+GGG | 0.717559 | 3.1:-80127420 | MS.gene48445:CDS |
GGTCACAGGACTTCAATGCG+TGG | 0.719791 | 3.1:-80128681 | MS.gene48445:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTAATAAAAAAAATT+AGG | + | chr3.1:80128226-80128245 | None:intergenic | 0.0% |
!! | TAAATAAATAAATAAATAAA+TGG | + | chr3.1:80123399-80123418 | None:intergenic | 0.0% |
!!! | AAGCAAAATTTAAAATTTAA+AGG | + | chr3.1:80124174-80124193 | None:intergenic | 10.0% |
!!! | GTATAATTTTATAACTAATT+TGG | + | chr3.1:80125737-80125756 | None:intergenic | 10.0% |
!! | AATAGAGATATAATATATGA+TGG | - | chr3.1:80126964-80126983 | MS.gene48445:CDS | 15.0% |
!! | CAAAAAAATTAAAGTAAAAC+AGG | + | chr3.1:80123559-80123578 | None:intergenic | 15.0% |
!! | TCATAAGTTTCAATTTAAAT+TGG | + | chr3.1:80126024-80126043 | None:intergenic | 15.0% |
!! | TGTATATTAGTAGAAAAATA+TGG | + | chr3.1:80125823-80125842 | None:intergenic | 15.0% |
!! | TTAATCTTTACCAAATTATA+AGG | - | chr3.1:80127428-80127447 | MS.gene48445:CDS | 15.0% |
!!! | ATATTATCCATTTTCTTTTA+TGG | - | chr3.1:80126265-80126284 | MS.gene48445:intron | 15.0% |
!!! | GTGTTATTAAATCAATTATA+TGG | - | chr3.1:80123585-80123604 | MS.gene48445:intron | 15.0% |
!!! | TATTATCCATTTTCTTTTAT+GGG | - | chr3.1:80126266-80126285 | MS.gene48445:intron | 15.0% |
!!! | TTATCTTTTAGAATCATATA+TGG | - | chr3.1:80125352-80125371 | MS.gene48445:intron | 15.0% |
!! | AAAAGTTGAGTTATATGATA+TGG | + | chr3.1:80126125-80126144 | None:intergenic | 20.0% |
!! | AAATATGGTCAAAATAAGTT+AGG | + | chr3.1:80125808-80125827 | None:intergenic | 20.0% |
!! | AAATGAATAAAAACAGAAGT+GGG | + | chr3.1:80126238-80126257 | None:intergenic | 20.0% |
!! | AGAAAAACAGTCATAAAAAA+AGG | + | chr3.1:80124549-80124568 | None:intergenic | 20.0% |
!! | CAACATAATCTTAAGTAAAA+AGG | + | chr3.1:80124110-80124129 | None:intergenic | 20.0% |
!! | TAAATGAATAAAAACAGAAG+TGG | + | chr3.1:80126239-80126258 | None:intergenic | 20.0% |
!! | TATATTCAGATAGTCAAATA+TGG | + | chr3.1:80127910-80127929 | None:intergenic | 20.0% |
!! | TGAGAATCTTATAAAATGAA+AGG | + | chr3.1:80127481-80127500 | None:intergenic | 20.0% |
!! | TTATAAGATTCTCATTTGAA+GGG | - | chr3.1:80127487-80127506 | MS.gene48445:intron | 20.0% |
!! | TTTATAAGATTCTCATTTGA+AGG | - | chr3.1:80127486-80127505 | MS.gene48445:intron | 20.0% |
!! | TTTATCTTGTGTTAAAGAAA+TGG | + | chr3.1:80123671-80123690 | None:intergenic | 20.0% |
!!! | AATATGAGATTTTTTTTCAC+CGG | - | chr3.1:80125535-80125554 | MS.gene48445:intron | 20.0% |
!!! | ATTATCCATTTTCTTTTATG+GGG | - | chr3.1:80126267-80126286 | MS.gene48445:intron | 20.0% |
!!! | ATTTTTTTCTTCCAATTTCA+GGG | - | chr3.1:80127938-80127957 | MS.gene48445:intron | 20.0% |
!!! | GGTAATGAAATTTTATGTTA+TGG | + | chr3.1:80124358-80124377 | None:intergenic | 20.0% |
!!! | TATTTTTTTCTTCCAATTTC+AGG | - | chr3.1:80127937-80127956 | MS.gene48445:intron | 20.0% |
!!! | TGTTTTTCTTCACATATTAT+CGG | - | chr3.1:80124560-80124579 | MS.gene48445:intron | 20.0% |
!!! | TTATTTAGTTTTGTTTGTGT+AGG | - | chr3.1:80123412-80123431 | MS.gene48445:intron | 20.0% |
!!! | TTTAAATTTTGCTTGTACTT+GGG | - | chr3.1:80124180-80124199 | MS.gene48445:CDS | 20.0% |
!!! | TTTGATTTTTCCATTTTTTG+AGG | - | chr3.1:80124662-80124681 | MS.gene48445:intron | 20.0% |
!!! | TTTTAAATTTTGCTTGTACT+TGG | - | chr3.1:80124179-80124198 | MS.gene48445:CDS | 20.0% |
! | AAAATCAAAGACAAAACCTT+AGG | + | chr3.1:80124651-80124670 | None:intergenic | 25.0% |
! | AAACTTCTACATCCAAATAT+AGG | - | chr3.1:80127552-80127571 | MS.gene48445:intron | 25.0% |
! | AACTTCAGTTAGAGTATATT+CGG | - | chr3.1:80127349-80127368 | MS.gene48445:intron | 25.0% |
! | AAGACTAGAATATATCATTC+AGG | + | chr3.1:80128264-80128283 | None:intergenic | 25.0% |
! | AATGAATAAAAACAGAAGTG+GGG | + | chr3.1:80126237-80126256 | None:intergenic | 25.0% |
! | AATGGCAAAATGAAAATTGA+AGG | + | chr3.1:80123381-80123400 | None:intergenic | 25.0% |
! | AATTCCAATCTCTATTAGAA+AGG | - | chr3.1:80128415-80128434 | MS.gene48445:intron | 25.0% |
! | AGAAAAAAAAAATACTCCAC+AGG | + | chr3.1:80125327-80125346 | None:intergenic | 25.0% |
! | ATAAGTTGTTTATCCAAACA+AGG | + | chr3.1:80123611-80123630 | None:intergenic | 25.0% |
! | ATTTAGTGTATTACATAGAG+TGG | + | chr3.1:80128353-80128372 | None:intergenic | 25.0% |
! | ATTTCCTTTCTAATAGAGAT+TGG | + | chr3.1:80128422-80128441 | None:intergenic | 25.0% |
! | CATGTAAACTATCCTATATT+TGG | + | chr3.1:80127567-80127586 | None:intergenic | 25.0% |
! | CTATTAGAAAGGAAATCAAT+TGG | - | chr3.1:80128426-80128445 | MS.gene48445:intron | 25.0% |
! | TATATTTGGATGTAGAAGTT+TGG | + | chr3.1:80127553-80127572 | None:intergenic | 25.0% |
! | TCATAGCATTCCTTATAATT+TGG | + | chr3.1:80127441-80127460 | None:intergenic | 25.0% |
! | TTAAGCTCAAAATTATGCAT+TGG | - | chr3.1:80125942-80125961 | MS.gene48445:intron | 25.0% |
! | TTACATGCAAAATGATTTCA+TGG | + | chr3.1:80127239-80127258 | None:intergenic | 25.0% |
! | TTAGAACTCTTGAATTTCTT+TGG | - | chr3.1:80124922-80124941 | MS.gene48445:intron | 25.0% |
! | TTATTTGAATGTCAAGTTCA+AGG | - | chr3.1:80123436-80123455 | MS.gene48445:intron | 25.0% |
! | TTTCATACATAACATCCAAT+AGG | - | chr3.1:80127086-80127105 | MS.gene48445:intron | 25.0% |
! | TTTGTAGTGTAAGAATATGA+GGG | - | chr3.1:80124290-80124309 | MS.gene48445:intron | 25.0% |
!! | AATTCAAGAGTTCTAACAAA+TGG | + | chr3.1:80124918-80124937 | None:intergenic | 25.0% |
!! | ACTTGGATAGATTTCATTTT+TGG | - | chr3.1:80127840-80127859 | MS.gene48445:intron | 25.0% |
!! | ATTAAAAGATGTTTGATGAC+AGG | - | chr3.1:80128843-80128862 | MS.gene48445:CDS | 25.0% |
!! | ATTTCTCTTGTAGTTTTTCT+AGG | + | chr3.1:80126913-80126932 | None:intergenic | 25.0% |
!! | CTAGTTAAATACTTTTCAGA+AGG | - | chr3.1:80128296-80128315 | MS.gene48445:intron | 25.0% |
!! | GTTTTTCTTCACATATTATC+GGG | - | chr3.1:80124561-80124580 | MS.gene48445:intron | 25.0% |
!! | TAATATATGATGGAACATTG+AGG | - | chr3.1:80126974-80126993 | MS.gene48445:CDS | 25.0% |
!! | TTTTACTTGTGATAGACATT+TGG | - | chr3.1:80128180-80128199 | MS.gene48445:intron | 25.0% |
!!! | AAAGTGATATCTTGATAATG+TGG | - | chr3.1:80124319-80124338 | MS.gene48445:intron | 25.0% |
!!! | ACTTATTTTGCAGCTTATAT+AGG | - | chr3.1:80123625-80123644 | MS.gene48445:intron | 25.0% |
!!! | CAAGTAAAAAGTATCACAAA+AGG | + | chr3.1:80128169-80128188 | None:intergenic | 25.0% |
!!! | CTTCTGAAAAGTATTTAACT+AGG | + | chr3.1:80128298-80128317 | None:intergenic | 25.0% |
!!! | CTTGGATAGATTTCATTTTT+GGG | - | chr3.1:80127841-80127860 | MS.gene48445:intron | 25.0% |
!!! | TTTTTTTCTTCTGTGAGTTA+TGG | - | chr3.1:80125444-80125463 | MS.gene48445:CDS | 25.0% |
AACGTCGAAAAAATTAAGCT+AGG | + | chr3.1:80123889-80123908 | None:intergenic | 30.0% | |
AAGCTATCCTAGTGAATTTA+GGG | - | chr3.1:80123720-80123739 | MS.gene48445:intron | 30.0% | |
AATATATTTGGCAGACATCA+TGG | - | chr3.1:80126403-80126422 | MS.gene48445:intron | 30.0% | |
AATATCTGATCTGACACTAT+GGG | + | chr3.1:80123866-80123885 | None:intergenic | 30.0% | |
AATTGTACCAATTTGGAAGA+AGG | - | chr3.1:80127671-80127690 | MS.gene48445:intron | 30.0% | |
ACAACAATCCTTCCTAAAAT+AGG | - | chr3.1:80125664-80125683 | MS.gene48445:intron | 30.0% | |
ACAATAAAAAAAGGGTAACC+CGG | + | chr3.1:80124022-80124041 | None:intergenic | 30.0% | |
ACTTGCTTCTTTCTCTATAA+AGG | + | chr3.1:80124434-80124453 | None:intergenic | 30.0% | |
AGAAAAAGAATGAACCTGAA+TGG | + | chr3.1:80123337-80123356 | None:intergenic | 30.0% | |
AGAAATTGAATTTCCATCCA+GGG | + | chr3.1:80127797-80127816 | None:intergenic | 30.0% | |
AGATGAGTTAAAAGTGAAAG+AGG | - | chr3.1:80128773-80128792 | MS.gene48445:CDS | 30.0% | |
AGTAAACATGTGATTCACAA+TGG | + | chr3.1:80124716-80124735 | None:intergenic | 30.0% | |
ATATATTTGGCAGACATCAT+GGG | - | chr3.1:80126404-80126423 | MS.gene48445:intron | 30.0% | |
ATGATATGGCACAATCAATA+TGG | + | chr3.1:80126111-80126130 | None:intergenic | 30.0% | |
ATGGACAAAGGGAATATATT+TGG | - | chr3.1:80126391-80126410 | MS.gene48445:intron | 30.0% | |
CAGAATCAATGTGTACAATT+TGG | + | chr3.1:80127868-80127887 | None:intergenic | 30.0% | |
CATGTGTAGATATCTTTGTT+AGG | - | chr3.1:80126545-80126564 | MS.gene48445:intron | 30.0% | |
CTACAAACAGTACAAGATAT+AGG | + | chr3.1:80124277-80124296 | None:intergenic | 30.0% | |
CTCCTTACTACATAAACTAT+AGG | + | chr3.1:80126848-80126867 | None:intergenic | 30.0% | |
CTTAAATCTGCAATATCACA+AGG | - | chr3.1:80128594-80128613 | MS.gene48445:CDS | 30.0% | |
CTTATTTCCCTAAATTCACT+AGG | + | chr3.1:80123730-80123749 | None:intergenic | 30.0% | |
GAAGAAGGATGATGAAAAAA+TGG | - | chr3.1:80127686-80127705 | MS.gene48445:intron | 30.0% | |
GACCTATAGTTTATGTAGTA+AGG | - | chr3.1:80126843-80126862 | MS.gene48445:intron | 30.0% | |
GCTTGGATTTATCATAAGTA+GGG | + | chr3.1:80126089-80126108 | None:intergenic | 30.0% | |
GTTCCTCTTAGAATTGAAAT+TGG | - | chr3.1:80127962-80127981 | MS.gene48445:intron | 30.0% | |
GTTTGTAGTGTAAGAATATG+AGG | - | chr3.1:80124289-80124308 | MS.gene48445:intron | 30.0% | |
TAAGCTATCCTAGTGAATTT+AGG | - | chr3.1:80123719-80123738 | MS.gene48445:intron | 30.0% | |
TAGTAACAAATAAGAAGTCG+TGG | + | chr3.1:80125476-80125495 | None:intergenic | 30.0% | |
TCAACTGTGTCATGTATTAA+GGG | - | chr3.1:80125979-80125998 | MS.gene48445:intron | 30.0% | |
TCATGGAAGAAAATGAATTG+AGG | + | chr3.1:80127222-80127241 | None:intergenic | 30.0% | |
TCTTTCTCTATAAAGGAGTA+AGG | + | chr3.1:80124427-80124446 | None:intergenic | 30.0% | |
TGGATGGAAATTCAATTTCT+GGG | - | chr3.1:80127797-80127816 | MS.gene48445:intron | 30.0% | |
TGGTAATTAATGTTTACCTG+TGG | + | chr3.1:80123488-80123507 | None:intergenic | 30.0% | |
TTAAAAGTGAAAGAGGAAAC+TGG | - | chr3.1:80128780-80128799 | MS.gene48445:CDS | 30.0% | |
TTACATTACTTGTCTGATCA+AGG | + | chr3.1:80126607-80126626 | None:intergenic | 30.0% | |
TTCAAATGAGTCATCTATTG+CGG | + | chr3.1:80125770-80125789 | None:intergenic | 30.0% | |
TTCATTCAACAGGAAAAAAC+AGG | + | chr3.1:80124849-80124868 | None:intergenic | 30.0% | |
TTGATTAAATCCTTTCAACG+AGG | - | chr3.1:80126324-80126343 | MS.gene48445:intron | 30.0% | |
TTTACCTGATTAATCAAGAG+AGG | + | chr3.1:80124766-80124785 | None:intergenic | 30.0% | |
! | AAACATCTTTTAATCCCTTG+TGG | + | chr3.1:80128837-80128856 | None:intergenic | 30.0% |
! | ATTCAATTTCTGGGAAATGA+AGG | - | chr3.1:80127806-80127825 | MS.gene48445:intron | 30.0% |
! | CTAGTTGGATTTCCTATTTT+AGG | + | chr3.1:80125679-80125698 | None:intergenic | 30.0% |
! | GTTTTTCTGTAAATAAGAGG+AGG | - | chr3.1:80125586-80125605 | MS.gene48445:intron | 30.0% |
! | GTTTTTGTACAAGTGATAGT+AGG | + | chr3.1:80125703-80125722 | None:intergenic | 30.0% |
! | TAGTAACATGTATTTTCCAC+AGG | - | chr3.1:80123469-80123488 | MS.gene48445:intron | 30.0% |
! | TATCTGCAATTTGTTTGCAT+AGG | - | chr3.1:80123528-80123547 | MS.gene48445:intron | 30.0% |
! | TGAGATCAGATTTTGAATTG+AGG | + | chr3.1:80127117-80127136 | None:intergenic | 30.0% |
!! | AGATTTGCTACACAAGAATA+TGG | - | chr3.1:80126626-80126645 | MS.gene48445:intron | 30.0% |
!! | ATCAATTATATGGCCTTGTT+TGG | - | chr3.1:80123595-80123614 | MS.gene48445:intron | 30.0% |
!! | GATTTGCTACACAAGAATAT+GGG | - | chr3.1:80126627-80126646 | MS.gene48445:intron | 30.0% |
!! | TTACTGAAACTTTGAGTTGA+CGG | + | chr3.1:80125517-80125536 | None:intergenic | 30.0% |
!! | TTGGATTTCCTATTTTAGGA+AGG | + | chr3.1:80125675-80125694 | None:intergenic | 30.0% |
!!! | GCTGTTTTTCTGTAAATAAG+AGG | - | chr3.1:80125583-80125602 | MS.gene48445:intron | 30.0% |
!!! | GTTTTTTCCTGTTGAATGAA+CGG | - | chr3.1:80124849-80124868 | MS.gene48445:intron | 30.0% |
!!! | TTTTTTCCTGTTGAATGAAC+GGG | - | chr3.1:80124850-80124869 | MS.gene48445:intron | 30.0% |
AAAGAAGCAAGTCATGTTGA+GGG | - | chr3.1:80124442-80124461 | MS.gene48445:intron | 35.0% | |
AAATAAGAGGAGGTAGGATT+AGG | - | chr3.1:80125596-80125615 | MS.gene48445:intron | 35.0% | |
AACTGTCTCTAATGCTTTAG+TGG | - | chr3.1:80128382-80128401 | MS.gene48445:intron | 35.0% | |
AATGCCGAATTAGCAGATTA+CGG | - | chr3.1:80123258-80123277 | MS.gene48445:intron | 35.0% | |
ACAACATTAGAGAGAGACTT+GGG | - | chr3.1:80126758-80126777 | MS.gene48445:CDS | 35.0% | |
ACATACACCTCCAAAATTGA+AGG | + | chr3.1:80128076-80128095 | None:intergenic | 35.0% | |
AGACATTTGGATCTAACTGT+TGG | - | chr3.1:80128193-80128212 | MS.gene48445:intron | 35.0% | |
AGGTGGTAATTGTACCAATT+TGG | - | chr3.1:80127664-80127683 | MS.gene48445:intron | 35.0% | |
AGTAAGGAGAGTAGATAAGA+CGG | - | chr3.1:80126859-80126878 | MS.gene48445:intron | 35.0% | |
AGTTAGCAGTAGTGACAATT+GGG | - | chr3.1:80124476-80124495 | MS.gene48445:intron | 35.0% | |
ATCTTGACGAAGAGAATATG+CGG | + | chr3.1:80124998-80125017 | None:intergenic | 35.0% | |
CACAAAATACTTCATTCCTG+TGG | - | chr3.1:80125308-80125327 | MS.gene48445:intron | 35.0% | |
CACAGATGAAAATGGACAAA+GGG | - | chr3.1:80126380-80126399 | MS.gene48445:intron | 35.0% | |
CAGAAATTGAATTTCCATCC+AGG | + | chr3.1:80127798-80127817 | None:intergenic | 35.0% | |
CAGCATGAACTTGTCAAAAA+TGG | + | chr3.1:80127629-80127648 | None:intergenic | 35.0% | |
CTGGATGGAAATTCAATTTC+TGG | - | chr3.1:80127796-80127815 | MS.gene48445:intron | 35.0% | |
CTTGAATTTCTTTGGCAAGA+AGG | - | chr3.1:80124930-80124949 | MS.gene48445:intron | 35.0% | |
GAAATTGAATTTCCATCCAG+GGG | + | chr3.1:80127796-80127815 | None:intergenic | 35.0% | |
GAAGACCCCATAAAAGAAAA+TGG | + | chr3.1:80126275-80126294 | None:intergenic | 35.0% | |
GAATATCTGATCTGACACTA+TGG | + | chr3.1:80123867-80123886 | None:intergenic | 35.0% | |
GGACCAATTTCAATTCTAAG+AGG | + | chr3.1:80127968-80127987 | None:intergenic | 35.0% | |
GGCTTGGATTTATCATAAGT+AGG | + | chr3.1:80126090-80126109 | None:intergenic | 35.0% | |
GGTGTATGTTAAAGACAAGT+TGG | - | chr3.1:80128087-80128106 | MS.gene48445:intron | 35.0% | |
GGTTAAATGTAGCACTTTAG+AGG | - | chr3.1:80126566-80126585 | MS.gene48445:intron | 35.0% | |
GTCAACTGTGTCATGTATTA+AGG | - | chr3.1:80125978-80125997 | MS.gene48445:intron | 35.0% | |
GTCATTAGAGTTGTTAACCA+TGG | + | chr3.1:80128728-80128747 | None:intergenic | 35.0% | |
TAACATAACCAGAAAGACCA+TGG | - | chr3.1:80128708-80128727 | MS.gene48445:CDS | 35.0% | |
TAAGGCTGCTTGTAAAAACA+GGG | - | chr3.1:80123925-80123944 | MS.gene48445:CDS | 35.0% | |
TAATCAAGAGAGGAAGATCA+CGG | + | chr3.1:80124756-80124775 | None:intergenic | 35.0% | |
TCAAATGAGTCATCTATTGC+GGG | + | chr3.1:80125769-80125788 | None:intergenic | 35.0% | |
TCACAGATGAAAATGGACAA+AGG | - | chr3.1:80126379-80126398 | MS.gene48445:intron | 35.0% | |
TCAGTTAGAGTATATTCGGA+TGG | - | chr3.1:80127353-80127372 | MS.gene48445:intron | 35.0% | |
TCATCATCCTTCTTCCAAAT+TGG | + | chr3.1:80127681-80127700 | None:intergenic | 35.0% | |
TCTTCCTCTCTTGATTAATC+AGG | - | chr3.1:80124759-80124778 | MS.gene48445:intron | 35.0% | |
TGAAGGTTCGGATTTAAACT+TGG | - | chr3.1:80127823-80127842 | MS.gene48445:intron | 35.0% | |
TGAATCACATGTTTACTCAG+TGG | - | chr3.1:80124719-80124738 | MS.gene48445:intron | 35.0% | |
TGCAATATCACAAGGCAAAT+GGG | - | chr3.1:80128602-80128621 | MS.gene48445:CDS | 35.0% | |
TTAAGGCTGCTTGTAAAAAC+AGG | - | chr3.1:80123924-80123943 | MS.gene48445:CDS | 35.0% | |
TTAGAATTGAAATTGGTCCC+CGG | - | chr3.1:80127969-80127988 | MS.gene48445:intron | 35.0% | |
TTCACAATGGTTTCACTTGT+AGG | + | chr3.1:80124703-80124722 | None:intergenic | 35.0% | |
TTCTGTAAATAAGAGGAGGT+AGG | - | chr3.1:80125590-80125609 | MS.gene48445:intron | 35.0% | |
TTGCAGCTAATGTAGCATTA+AGG | - | chr3.1:80125558-80125577 | MS.gene48445:intron | 35.0% | |
TTTAAAGAGACCGAAATAGC+TGG | + | chr3.1:80125411-80125430 | None:intergenic | 35.0% | |
! | AAAGCATTAGAGACAGTTCT+CGG | + | chr3.1:80128380-80128399 | None:intergenic | 35.0% |
! | AGCTTGTTCAAAAGCAAATC+TGG | + | chr3.1:80125110-80125129 | None:intergenic | 35.0% |
! | ATGCATTGGTATGCGTAATA+GGG | - | chr3.1:80125956-80125975 | MS.gene48445:intron | 35.0% |
! | ATTGATTCTGTTTATGCTGC+TGG | - | chr3.1:80127878-80127897 | MS.gene48445:intron | 35.0% |
! | ATTTCTGGGAAATGAAGGTT+CGG | - | chr3.1:80127811-80127830 | MS.gene48445:intron | 35.0% |
! | CTTGATTTTGCCAGCTATTT+CGG | - | chr3.1:80125398-80125417 | MS.gene48445:intron | 35.0% |
! | GACTATAGCAAACCTTTTAG+TGG | - | chr3.1:80126188-80126207 | MS.gene48445:intron | 35.0% |
! | TATGCATTGGTATGCGTAAT+AGG | - | chr3.1:80125955-80125974 | MS.gene48445:intron | 35.0% |
! | TCTAAAGTGGAAACATTTGC+TGG | - | chr3.1:80125157-80125176 | MS.gene48445:intron | 35.0% |
! | TGAGAAATTGCTGTTGTTGA+GGG | + | chr3.1:80123060-80123079 | None:intergenic | 35.0% |
! | TGTATTACATAGAGTGGACT+TGG | + | chr3.1:80128347-80128366 | None:intergenic | 35.0% |
! | TTTTGCTTACAAACGAAACC+AGG | + | chr3.1:80124795-80124814 | None:intergenic | 35.0% |
!! | AGAAGGCATCAAACAAATGA+TGG | + | chr3.1:80124380-80124399 | None:intergenic | 35.0% |
!! | AGCTTGCTACTTAAAGTTCA+AGG | + | chr3.1:80125380-80125399 | None:intergenic | 35.0% |
!! | GAAAGTGTTTGGAATCTCTA+TGG | - | chr3.1:80128048-80128067 | MS.gene48445:intron | 35.0% |
!! | GAAGGCATCAAACAAATGAT+GGG | + | chr3.1:80124379-80124398 | None:intergenic | 35.0% |
!!! | CGCTTATTTTATGCTCGAAT+TGG | + | chr3.1:80126676-80126695 | None:intergenic | 35.0% |
!!! | TTTTCCATTTTTTGAGGCTG+TGG | - | chr3.1:80124668-80124687 | MS.gene48445:intron | 35.0% |
AAAATAGCCACTTCTTCAGC+AGG | + | chr3.1:80128873-80128892 | None:intergenic | 40.0% | |
AAAGAAGCTCTTCAAAGCTC+TGG | - | chr3.1:80127735-80127754 | MS.gene48445:intron | 40.0% | |
AAATAAGCGTAGAGGAGATG+AGG | - | chr3.1:80126687-80126706 | MS.gene48445:CDS | 40.0% | |
AAGAATATGGGACAGAGTGT+TGG | - | chr3.1:80126639-80126658 | MS.gene48445:CDS | 40.0% | |
AATGCTACATTAGCTGCAAC+CGG | + | chr3.1:80125557-80125576 | None:intergenic | 40.0% | |
AATGTCAAGTTCAAGGAGAC+TGG | - | chr3.1:80123443-80123462 | MS.gene48445:intron | 40.0% | |
ACAATGGTTATTCGTCCCTA+TGG | - | chr3.1:80123294-80123313 | MS.gene48445:CDS | 40.0% | |
ACAGTACAAGATATAGGCAC+AGG | + | chr3.1:80124271-80124290 | None:intergenic | 40.0% | |
AGCTGCCATACCTGTTATTA+CGG | - | chr3.1:80125126-80125145 | MS.gene48445:intron | 40.0% | |
ATATCCAGGAGAGATATTCC+TGG | - | chr3.1:80128016-80128035 | MS.gene48445:intron | 40.0% | |
ATGGCACAATCAATATGGCT+TGG | + | chr3.1:80126106-80126125 | None:intergenic | 40.0% | |
ATGTCAATTTGCCTGTTTGC+TGG | + | chr3.1:80128513-80128532 | None:intergenic | 40.0% | |
ATTGTCACTACTGCTAACTC+TGG | + | chr3.1:80124475-80124494 | None:intergenic | 40.0% | |
CAACATTAGAGAGAGACTTG+GGG | - | chr3.1:80126759-80126778 | MS.gene48445:CDS | 40.0% | |
CAATGGTTTCACTTGTAGGT+CGG | + | chr3.1:80124699-80124718 | None:intergenic | 40.0% | |
CAATTGGAATGAGTTCCTTG+TGG | - | chr3.1:80128442-80128461 | MS.gene48445:CDS | 40.0% | |
CACTCATGCTTTCTATAGCT+TGG | + | chr3.1:80126158-80126177 | None:intergenic | 40.0% | |
CACTGGATGTATTCATGCAT+CGG | - | chr3.1:80127319-80127338 | MS.gene48445:intron | 40.0% | |
CAGCTAATGTAGCATTAAGG+AGG | - | chr3.1:80125561-80125580 | MS.gene48445:intron | 40.0% | |
CGAGCATAAAATAAGCGTAG+AGG | - | chr3.1:80126679-80126698 | MS.gene48445:CDS | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr3.1:80123956-80123975 | MS.gene48445:intron | 40.0% | |
CTGCAATATCACAAGGCAAA+TGG | - | chr3.1:80128601-80128620 | MS.gene48445:CDS | 40.0% | |
CTGTGTCATGTATTAAGGGA+CGG | - | chr3.1:80125983-80126002 | MS.gene48445:intron | 40.0% | |
GAAAGAAGCAAGTCATGTTG+AGG | - | chr3.1:80124441-80124460 | MS.gene48445:intron | 40.0% | |
GAAGGATTGTTGTGTAAGTG+TGG | + | chr3.1:80125657-80125676 | None:intergenic | 40.0% | |
GACAACATTAGAGAGAGACT+TGG | - | chr3.1:80126757-80126776 | MS.gene48445:CDS | 40.0% | |
GAGGATAGTCAAATCACTAG+AGG | - | chr3.1:80126881-80126900 | MS.gene48445:intron | 40.0% | |
GAGTTAGCAGTAGTGACAAT+TGG | - | chr3.1:80124475-80124494 | MS.gene48445:intron | 40.0% | |
GTAATCTGCTAATTCGGCAT+TGG | + | chr3.1:80123259-80123278 | None:intergenic | 40.0% | |
GTACAATTACCACCTAAACC+AGG | + | chr3.1:80127659-80127678 | None:intergenic | 40.0% | |
GTGCAGTTCACAGATGAAAA+TGG | - | chr3.1:80126372-80126391 | MS.gene48445:intron | 40.0% | |
GTTAGAGTATATTCGGATGG+AGG | - | chr3.1:80127356-80127375 | MS.gene48445:intron | 40.0% | |
GTTAGCAGTAGTGACAATTG+GGG | - | chr3.1:80124477-80124496 | MS.gene48445:intron | 40.0% | |
GTTGTTAACCATGGTCTTTC+TGG | + | chr3.1:80128719-80128738 | None:intergenic | 40.0% | |
TAAGAGGAACTCCCTGAAAT+TGG | + | chr3.1:80127952-80127971 | None:intergenic | 40.0% | |
TAATCAGGTAAACGATGTCC+TGG | - | chr3.1:80124774-80124793 | MS.gene48445:intron | 40.0% | |
TACACGATTGAGGCAATGAT+GGG | - | chr3.1:80125193-80125212 | MS.gene48445:intron | 40.0% | |
TACGGGTCGAAAATCTAAAG+TGG | - | chr3.1:80125144-80125163 | MS.gene48445:intron | 40.0% | |
TAGAAAAGACGGTGAAAACC+CGG | - | chr3.1:80126794-80126813 | MS.gene48445:CDS | 40.0% | |
TAGAATTGAAATTGGTCCCC+GGG | - | chr3.1:80127970-80127989 | MS.gene48445:intron | 40.0% | |
TATCCAGGAGAGATATTCCT+GGG | - | chr3.1:80128017-80128036 | MS.gene48445:intron | 40.0% | |
TGAATTGAGGTGAGTCCTAT+TGG | + | chr3.1:80127104-80127123 | None:intergenic | 40.0% | |
TGCAGAACAGATTTGAGAGA+AGG | + | chr3.1:80124397-80124416 | None:intergenic | 40.0% | |
TGTCAATTTGCCTGTTTGCT+GGG | + | chr3.1:80128512-80128531 | None:intergenic | 40.0% | |
TGTGGTAAGACTAGCAAGAT+AGG | - | chr3.1:80126725-80126744 | MS.gene48445:CDS | 40.0% | |
TTAGCAGTAGTGACAATTGG+GGG | - | chr3.1:80124478-80124497 | MS.gene48445:intron | 40.0% | |
TTATACCACTAAGTGGTGGT+CGG | + | chr3.1:80127019-80127038 | None:intergenic | 40.0% | |
TTCCATTTGAACAGCCACAA+GGG | - | chr3.1:80128820-80128839 | MS.gene48445:CDS | 40.0% | |
TTGGATGTAGAAGTTTGGAG+TGG | + | chr3.1:80127548-80127567 | None:intergenic | 40.0% | |
TTGTAAGACCTACACGATTG+AGG | - | chr3.1:80125183-80125202 | MS.gene48445:intron | 40.0% | |
TTTCCATTTGAACAGCCACA+AGG | - | chr3.1:80128819-80128838 | MS.gene48445:CDS | 40.0% | |
! | ACAGTGAAAGCTGTCTCTTT+TGG | - | chr3.1:80127167-80127186 | MS.gene48445:CDS | 40.0% |
! | AGAAATTGCTGTTGTTGAGG+GGG | + | chr3.1:80123058-80123077 | None:intergenic | 40.0% |
! | AGAATATGGGACAGAGTGTT+GGG | - | chr3.1:80126640-80126659 | MS.gene48445:CDS | 40.0% |
! | CAAGTGATAGTAGGACTAGT+TGG | + | chr3.1:80125694-80125713 | None:intergenic | 40.0% |
! | CGAGATACAGTCTTCTCTTT+TGG | - | chr3.1:80128111-80128130 | MS.gene48445:intron | 40.0% |
! | CTCTATGGAGCCTTCAATTT+TGG | - | chr3.1:80128063-80128082 | MS.gene48445:intron | 40.0% |
! | CTGCAATTTGTTTGCATAGG+AGG | - | chr3.1:80123531-80123550 | MS.gene48445:intron | 40.0% |
! | GAGAAATTGCTGTTGTTGAG+GGG | + | chr3.1:80123059-80123078 | None:intergenic | 40.0% |
! | GATTTTCGACCCGTAATAAC+AGG | + | chr3.1:80125139-80125158 | None:intergenic | 40.0% |
! | GTGAGAAATTGCTGTTGTTG+AGG | + | chr3.1:80123061-80123080 | None:intergenic | 40.0% |
! | TACATAGAGTGGACTTGGTT+TGG | + | chr3.1:80128342-80128361 | None:intergenic | 40.0% |
! | TATGGAGCCTTCAATTTTGG+AGG | - | chr3.1:80128066-80128085 | MS.gene48445:intron | 40.0% |
! | TTCACCGTCTTTTCTACAAG+AGG | + | chr3.1:80126790-80126809 | None:intergenic | 40.0% |
!! | AAAAGTTTTGGCCAAGGTTG+TGG | + | chr3.1:80125249-80125268 | None:intergenic | 40.0% |
!! | ACAGTCTTCTCTTTTGGAGA+GGG | - | chr3.1:80128117-80128136 | MS.gene48445:intron | 40.0% |
!! | CAATCTTTGGAGGAAGCATT+AGG | + | chr3.1:80126485-80126504 | None:intergenic | 40.0% |
!! | GTTAGTACTCGTTTTGTTGG+AGG | - | chr3.1:80126429-80126448 | MS.gene48445:intron | 40.0% |
!! | TACAGTCTTCTCTTTTGGAG+AGG | - | chr3.1:80128116-80128135 | MS.gene48445:intron | 40.0% |
!! | TTGGATCTAACTGTTGGTTC+TGG | - | chr3.1:80128199-80128218 | MS.gene48445:intron | 40.0% |
!!! | TTTTGTTGGAGGCATCATCA+TGG | - | chr3.1:80126440-80126459 | MS.gene48445:intron | 40.0% |
AAACACAACCTAGCAGACCA+AGG | + | chr3.1:80128636-80128655 | None:intergenic | 45.0% | |
AACACAACCTAGCAGACCAA+GGG | + | chr3.1:80128635-80128654 | None:intergenic | 45.0% | |
AACCTGAATGGCTTCCCAAA+TGG | + | chr3.1:80123325-80123344 | None:intergenic | 45.0% | |
AAGCACTTGCGACACTGTTT+GGG | + | chr3.1:80123804-80123823 | None:intergenic | 45.0% | |
AAGGAGAGTAGATAAGACGG+AGG | - | chr3.1:80126862-80126881 | MS.gene48445:intron | 45.0% | |
AGACCTGTGTTTCAAAGGCA+CGG | + | chr3.1:80125273-80125292 | None:intergenic | 45.0% | |
AGAGATATTCCTGGGAAGCA+AGG | - | chr3.1:80128025-80128044 | MS.gene48445:intron | 45.0% | |
AGCGCCTCTTGTAGAAAAGA+CGG | - | chr3.1:80126783-80126802 | MS.gene48445:CDS | 45.0% | |
AGGAAACTGGAGCAACTATC+AGG | - | chr3.1:80128793-80128812 | MS.gene48445:CDS | 45.0% | |
AGGATGTTGCGTTGTATGTG+TGG | - | chr3.1:80126707-80126726 | MS.gene48445:CDS | 45.0% | |
AGTGGGCAAATGTCACAAGA+TGG | - | chr3.1:80124877-80124896 | MS.gene48445:intron | 45.0% | |
ATAACCATTGTACCGCGAAC+CGG | + | chr3.1:80123285-80123304 | None:intergenic | 45.0% | |
ATCACAAGGCAAATGGGCAA+GGG | - | chr3.1:80128608-80128627 | MS.gene48445:CDS | 45.0% | |
ATCCCTTGTGGCTGTTCAAA+TGG | + | chr3.1:80128825-80128844 | None:intergenic | 45.0% | |
ATGAGTCATCTATTGCGGGA+CGG | + | chr3.1:80125765-80125784 | None:intergenic | 45.0% | |
ATGGTACATGGAGATGATGC+TGG | - | chr3.1:80126459-80126478 | MS.gene48445:intron | 45.0% | |
CAAGTATTCTGCTCTGTTGC+AGG | - | chr3.1:80125060-80125079 | MS.gene48445:intron | 45.0% | |
CAGGTATGGTTGGATGCTAT+TGG | - | chr3.1:80126513-80126532 | MS.gene48445:intron | 45.0% | |
CATCATTGCCTCAATCGTGT+AGG | + | chr3.1:80125194-80125213 | None:intergenic | 45.0% | |
CCACTTAGTGGTATAAGGCT+TGG | - | chr3.1:80127023-80127042 | MS.gene48445:intron | 45.0% | |
CGAATTAGCAGATTACGGTC+CGG | - | chr3.1:80123263-80123282 | MS.gene48445:intron | 45.0% | |
CGGACCGTAATCTGCTAATT+CGG | + | chr3.1:80123265-80123284 | None:intergenic | 45.0% | |
CGTTGAAAAGCTGTGACCTA+AGG | - | chr3.1:80124632-80124651 | MS.gene48445:intron | 45.0% | |
CTACACGATTGAGGCAATGA+TGG | - | chr3.1:80125192-80125211 | MS.gene48445:intron | 45.0% | |
CTGCTTGTAAAAACAGGGCA+AGG | - | chr3.1:80123930-80123949 | MS.gene48445:CDS | 45.0% | |
GAAGTGGGGAAAACAGAATC+AGG | + | chr3.1:80126223-80126242 | None:intergenic | 45.0% | |
GACCACCACTTAGTGGTATA+AGG | - | chr3.1:80127018-80127037 | MS.gene48445:CDS | 45.0% | |
GAGATATTCCTGGGAAGCAA+GGG | - | chr3.1:80128026-80128045 | MS.gene48445:intron | 45.0% | |
GCATCAGACCTGTGTTTCAA+AGG | + | chr3.1:80125278-80125297 | None:intergenic | 45.0% | |
GCATCCAACCATACCTGTAT+CGG | + | chr3.1:80126510-80126529 | None:intergenic | 45.0% | |
GCGTACAATACACCAAATGG+TGG | - | chr3.1:80123955-80123974 | MS.gene48445:intron | 45.0% | |
GCTGCCATACCTGTTATTAC+GGG | - | chr3.1:80125127-80125146 | MS.gene48445:intron | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | - | chr3.1:80123952-80123971 | MS.gene48445:intron | 45.0% | |
GGAGGAGATTGAGAAGATGA+AGG | - | chr3.1:80127374-80127393 | MS.gene48445:intron | 45.0% | |
GGGCAATTGCATTTCGAGAT+AGG | - | chr3.1:80128137-80128156 | MS.gene48445:intron | 45.0% | |
GTCATGTATTAAGGGACGGA+GGG | - | chr3.1:80125987-80126006 | MS.gene48445:intron | 45.0% | |
GTGGGCAAATGTCACAAGAT+GGG | - | chr3.1:80124878-80124897 | MS.gene48445:intron | 45.0% | |
TAAGCACTTGCGACACTGTT+TGG | + | chr3.1:80123805-80123824 | None:intergenic | 45.0% | |
TATCACAAGGCAAATGGGCA+AGG | - | chr3.1:80128607-80128626 | MS.gene48445:CDS | 45.0% | |
TATTTGGCAGACATCATGGG+CGG | - | chr3.1:80126407-80126426 | MS.gene48445:intron | 45.0% | |
TCCAGAAGAGGCAGAAAATG+AGG | - | chr3.1:80124971-80124990 | MS.gene48445:intron | 45.0% | |
TCCCAAATGGCGTAACCATA+GGG | + | chr3.1:80123312-80123331 | None:intergenic | 45.0% | |
TCCCTATGGTTACGCCATTT+GGG | - | chr3.1:80123308-80123327 | MS.gene48445:CDS | 45.0% | |
TCGACCCGTAATAACAGGTA+TGG | + | chr3.1:80125134-80125153 | None:intergenic | 45.0% | |
TGCACAACATGATGACCACA+AGG | + | chr3.1:80128460-80128479 | None:intergenic | 45.0% | |
TGTCATGTATTAAGGGACGG+AGG | - | chr3.1:80125986-80126005 | MS.gene48445:intron | 45.0% | |
TTCCCAAATGGCGTAACCAT+AGG | + | chr3.1:80123313-80123332 | None:intergenic | 45.0% | |
! | ACCTCATTTTCTGCCTCTTC+TGG | + | chr3.1:80124975-80124994 | None:intergenic | 45.0% |
! | ACCTGTATCGGTGCAATCTT+TGG | + | chr3.1:80126498-80126517 | None:intergenic | 45.0% |
! | AGATTGCACCGATACAGGTA+TGG | - | chr3.1:80126499-80126518 | MS.gene48445:intron | 45.0% |
! | AGCCTTATACCACTAAGTGG+TGG | + | chr3.1:80127023-80127042 | None:intergenic | 45.0% |
! | CCAAGCCTTATACCACTAAG+TGG | + | chr3.1:80127026-80127045 | None:intergenic | 45.0% |
! | GCGGTTAGTACTCGTTTTGT+TGG | - | chr3.1:80126426-80126445 | MS.gene48445:intron | 45.0% |
! | GTCAATTTGCCTGTTTGCTG+GGG | + | chr3.1:80128511-80128530 | None:intergenic | 45.0% |
! | TCCAAAGATTGCACCGATAC+AGG | - | chr3.1:80126494-80126513 | MS.gene48445:intron | 45.0% |
! | TGTATCGGTGCAATCTTTGG+AGG | + | chr3.1:80126495-80126514 | None:intergenic | 45.0% |
! | TTGAATGAACGGGCTTCAGT+GGG | - | chr3.1:80124860-80124879 | MS.gene48445:intron | 45.0% |
!! | CAAAGGCACGGGAAAAGTTT+TGG | + | chr3.1:80125261-80125280 | None:intergenic | 45.0% |
!! | GACAAGAAAGCATTGCAAGC+AGG | - | chr3.1:80125217-80125236 | MS.gene48445:intron | 45.0% |
!! | GATTCTTCGAGTTGTCGACT+CGG | + | chr3.1:80123170-80123189 | None:intergenic | 45.0% |
!! | TGCTTGTACTTGGGTTAGTG+CGG | - | chr3.1:80124189-80124208 | MS.gene48445:CDS | 45.0% |
!! | ACATATTTATATAAAAATAA+AGG | + | chr3.1:80128669-80128688 | None:intergenic | 5.0% |
!! | ATTTATATAACAATAAAAAA+AGG | + | chr3.1:80124031-80124050 | None:intergenic | 5.0% |
!! | TATATATAATTAATTAAGTT+TGG | + | chr3.1:80123508-80123527 | None:intergenic | 5.0% |
!! | TTTATATAACAATAAAAAAA+GGG | + | chr3.1:80124030-80124049 | None:intergenic | 5.0% |
!! | TTTATTGTTATATAAATTTA+AGG | - | chr3.1:80123907-80123926 | MS.gene48445:CDS | 5.0% |
!!! | TTTTATATAAATATGTTATA+CGG | - | chr3.1:80128673-80128692 | MS.gene48445:CDS | 5.0% |
AAAACCCGGCTTAGGTGGTT+TGG | - | chr3.1:80126808-80126827 | MS.gene48445:CDS | 50.0% | |
AAACCCGGCTTAGGTGGTTT+GGG | - | chr3.1:80126809-80126828 | MS.gene48445:CDS | 50.0% | |
AACACTTTCCCTTGCTTCCC+AGG | + | chr3.1:80128037-80128056 | None:intergenic | 50.0% | |
ACTAAAGCTCCCTCATACGC+AGG | + | chr3.1:80123996-80124015 | None:intergenic | 50.0% | |
AGGAGATCCTGCTGAAGAAG+TGG | - | chr3.1:80128863-80128882 | MS.gene48445:CDS | 50.0% | |
AGGATGCTGCAGCCACTAAA+AGG | + | chr3.1:80126203-80126222 | None:intergenic | 50.0% | |
AGTGACAATTGGGGGTGGAA+AGG | - | chr3.1:80124486-80124505 | MS.gene48445:intron | 50.0% | |
AGTTCATGCTGTGCATTGCC+TGG | - | chr3.1:80127638-80127657 | MS.gene48445:intron | 50.0% | |
CAGATCAAAGAACCCCTGGA+TGG | - | chr3.1:80127781-80127800 | MS.gene48445:intron | 50.0% | |
CCTGCCACAGCCTCAAAAAA+TGG | + | chr3.1:80124675-80124694 | None:intergenic | 50.0% | |
CTAAAGCTCCCTCATACGCA+GGG | + | chr3.1:80123995-80124014 | None:intergenic | 50.0% | |
CTGAAGCCCGTTCATTCAAC+AGG | + | chr3.1:80124859-80124878 | None:intergenic | 50.0% | |
CTTCCCAGGAATATCTCTCC+TGG | + | chr3.1:80128023-80128042 | None:intergenic | 50.0% | |
GACTCAGATCAAAGAACCCC+TGG | - | chr3.1:80127777-80127796 | MS.gene48445:intron | 50.0% | |
GAGGAAGATCACGGTAGCTA+TGG | + | chr3.1:80124747-80124766 | None:intergenic | 50.0% | |
GCATTGAAGTCCTGTGACCT+AGG | + | chr3.1:80123216-80123235 | None:intergenic | 50.0% | |
GGAACTTGAAGAGAAGCTCG+TGG | - | chr3.1:80124507-80124526 | MS.gene48445:intron | 50.0% | |
GGCATGAACATGTGTGCGAT+GGG | + | chr3.1:80128486-80128505 | None:intergenic | 50.0% | |
GTCCCTATGGTTACGCCATT+TGG | - | chr3.1:80123307-80123326 | MS.gene48445:CDS | 50.0% | |
TCACAAGGCAAATGGGCAAG+GGG | - | chr3.1:80128609-80128628 | MS.gene48445:CDS | 50.0% | |
TCTGATCTGACACTATGGGC+TGG | + | chr3.1:80123862-80123881 | None:intergenic | 50.0% | |
TGCTCATGCAACTCCAGAAG+AGG | - | chr3.1:80124959-80124978 | MS.gene48445:intron | 50.0% | |
TGCTGTGCATTGCCTGGTTT+AGG | - | chr3.1:80127644-80127663 | MS.gene48445:intron | 50.0% | |
TGGCATGAACATGTGTGCGA+TGG | + | chr3.1:80128487-80128506 | None:intergenic | 50.0% | |
TGTGCATTGCCTGGTTTAGG+TGG | - | chr3.1:80127647-80127666 | MS.gene48445:intron | 50.0% | |
! | AATTGCTGTTGTTGAGGGGG+AGG | + | chr3.1:80123055-80123074 | None:intergenic | 50.0% |
! | ATGAGGGAGCTTTAGTGCAC+CGG | - | chr3.1:80124000-80124019 | MS.gene48445:intron | 50.0% |
! | ATTTGCCTGTTTGCTGGGGA+TGG | + | chr3.1:80128507-80128526 | None:intergenic | 50.0% |
! | GACCTGTGTTTCAAAGGCAC+GGG | + | chr3.1:80125272-80125291 | None:intergenic | 50.0% |
! | GTGGAAGTGTGGTGATATCC+AGG | - | chr3.1:80128002-80128021 | MS.gene48445:intron | 50.0% |
! | GTTGAATGAACGGGCTTCAG+TGG | - | chr3.1:80124859-80124878 | MS.gene48445:intron | 50.0% |
! | TGCACCGATACAGGTATGGT+TGG | - | chr3.1:80126503-80126522 | MS.gene48445:intron | 50.0% |
!! | ACACTATGGGCTGGTTTGGA+CGG | + | chr3.1:80123853-80123872 | None:intergenic | 50.0% |
!! | ATATGGGACAGAGTGTTGGG+CGG | - | chr3.1:80126643-80126662 | MS.gene48445:CDS | 50.0% |
!! | CACGGGAAAAGTTTTGGCCA+AGG | + | chr3.1:80125255-80125274 | None:intergenic | 50.0% |
!! | GGAGGCATCATCATGGTACA+TGG | - | chr3.1:80126447-80126466 | MS.gene48445:intron | 50.0% |
!! | GGGAAGCAAGGGAAAGTGTT+TGG | - | chr3.1:80128037-80128056 | MS.gene48445:intron | 50.0% |
!! | TCTGACACTATGGGCTGGTT+TGG | + | chr3.1:80123857-80123876 | None:intergenic | 50.0% |
!! | TTCCCGTGCCTTTGAAACAC+AGG | - | chr3.1:80125267-80125286 | MS.gene48445:intron | 50.0% |
!!! | CCATTTTTTGAGGCTGTGGC+AGG | - | chr3.1:80124672-80124691 | MS.gene48445:intron | 50.0% |
ACTTCCACTAGACACGTCCC+GGG | + | chr3.1:80127990-80128009 | None:intergenic | 55.0% | |
AGACGGTGAAAACCCGGCTT+AGG | - | chr3.1:80126800-80126819 | MS.gene48445:CDS | 55.0% | |
AGTCATCACGCCTAGGTCAC+AGG | - | chr3.1:80123203-80123222 | MS.gene48445:intron | 55.0% | |
AGTCATCTATTGCGGGACGG+AGG | + | chr3.1:80125762-80125781 | None:intergenic | 55.0% | |
ATGCCCAAACCACCTAAGCC+GGG | + | chr3.1:80126815-80126834 | None:intergenic | 55.0% | |
CACTTCCACTAGACACGTCC+CGG | + | chr3.1:80127991-80128010 | None:intergenic | 55.0% | |
CATGCCCAAACCACCTAAGC+CGG | + | chr3.1:80126816-80126835 | None:intergenic | 55.0% | |
CGCCATTTGGGAAGCCATTC+AGG | - | chr3.1:80123320-80123339 | MS.gene48445:CDS | 55.0% | |
CTAAGTGGTGGTCGGCTACA+TGG | + | chr3.1:80127011-80127030 | None:intergenic | 55.0% | |
GCAGCTGCATCCTCGTTGAA+AGG | + | chr3.1:80126337-80126356 | None:intergenic | 55.0% | |
GCAGTAGTGACAATTGGGGG+TGG | - | chr3.1:80124481-80124500 | MS.gene48445:intron | 55.0% | |
GGACGTGTCTAGTGGAAGTG+TGG | - | chr3.1:80127991-80128010 | MS.gene48445:intron | 55.0% | |
GGCGGAGAATGATTGGGGAA+CGG | + | chr3.1:80123083-80123102 | None:intergenic | 55.0% | |
GGTCACAGGACTTCAATGCG+TGG | - | chr3.1:80123217-80123236 | MS.gene48445:intron | 55.0% | |
GTCATCTATTGCGGGACGGA+GGG | + | chr3.1:80125761-80125780 | None:intergenic | 55.0% | |
GTCTTTGGTCTCTGCTGCAG+TGG | + | chr3.1:80123148-80123167 | None:intergenic | 55.0% | |
GTGACCTAGGCGTGATGACT+CGG | + | chr3.1:80123203-80123222 | None:intergenic | 55.0% | |
TCATGCCATCCCCAGCAAAC+AGG | - | chr3.1:80128499-80128518 | MS.gene48445:intron | 55.0% | |
TGTAGCCGACCACCACTTAG+TGG | - | chr3.1:80127011-80127030 | MS.gene48445:CDS | 55.0% | |
TTGTTGAGGGGGAGGAGAAG+AGG | + | chr3.1:80123047-80123066 | None:intergenic | 55.0% | |
! | AGAAGGTGGCGGTGAAAGGT+TGG | + | chr3.1:80123116-80123135 | None:intergenic | 55.0% |
! | GGTCTCTGCTGCAGTGGTTT+TGG | + | chr3.1:80123142-80123161 | None:intergenic | 55.0% |
! | GGTGGTTTGGGCATGTAGAG+AGG | - | chr3.1:80126821-80126840 | MS.gene48445:intron | 55.0% |
! | TGAGGGAGCTTTAGTGCACC+GGG | - | chr3.1:80124001-80124020 | MS.gene48445:intron | 55.0% |
!! | CGAGTTGTCGACTCGGTCTT+TGG | + | chr3.1:80123163-80123182 | None:intergenic | 55.0% |
!! | GTTTTGGCCAAGGTTGTGGC+TGG | + | chr3.1:80125245-80125264 | None:intergenic | 55.0% |
!! | TGGCGGTGAAAGGTTGGTGA+CGG | + | chr3.1:80123110-80123129 | None:intergenic | 55.0% |
!!! | AGTGGTTTTGGCGGAGAAGG+TGG | + | chr3.1:80123130-80123149 | None:intergenic | 55.0% |
!!! | CTCTGCTGCAGTGGTTTTGG+CGG | + | chr3.1:80123139-80123158 | None:intergenic | 55.0% |
!!! | TGCAGTGGTTTTGGCGGAGA+AGG | + | chr3.1:80123133-80123152 | None:intergenic | 55.0% |
CGGTGAAAACCCGGCTTAGG+TGG | - | chr3.1:80126803-80126822 | MS.gene48445:CDS | 60.0% | |
CTTCCACTAGACACGTCCCG+GGG | + | chr3.1:80127989-80128008 | None:intergenic | 60.0% | |
GCAGGAACCAGCCACAACCT+TGG | - | chr3.1:80125235-80125254 | MS.gene48445:intron | 60.0% | |
TCATACGCAGGGTCCGGGAA+GGG | + | chr3.1:80123984-80124003 | None:intergenic | 60.0% | |
TTCCCGGACCCTGCGTATGA+GGG | - | chr3.1:80123984-80124003 | MS.gene48445:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3.1:80123968-80123987 | MS.gene48445:intron | 60.0% |
! | GCAGATTACGGTCCGGTTCG+CGG | - | chr3.1:80123270-80123289 | MS.gene48445:intron | 60.0% |
!! | CCTAGGCGTGATGACTCGGT+CGG | + | chr3.1:80123199-80123218 | None:intergenic | 60.0% |
!! | CGGTGAAAGGTTGGTGACGG+CGG | + | chr3.1:80123107-80123126 | None:intergenic | 60.0% |
!! | CTAGGCGTGATGACTCGGTC+GGG | + | chr3.1:80123198-80123217 | None:intergenic | 60.0% |
!! | GCGGTGGCGGAGAATGATTG+GGG | + | chr3.1:80123088-80123107 | None:intergenic | 60.0% |
!! | GGCGGTGGCGGAGAATGATT+GGG | + | chr3.1:80123089-80123108 | None:intergenic | 60.0% |
!! | GGTTTTGGCGGAGAAGGTGG+CGG | + | chr3.1:80123127-80123146 | None:intergenic | 60.0% |
!! | TAGGCGTGATGACTCGGTCG+GGG | + | chr3.1:80123197-80123216 | None:intergenic | 60.0% |
!! | TGAAAGGTTGGTGACGGCGG+TGG | + | chr3.1:80123104-80123123 | None:intergenic | 60.0% |
CAAGGGGCCCTTGGTCTGCT+AGG | - | chr3.1:80128625-80128644 | MS.gene48445:CDS | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | + | chr3.1:80123983-80124002 | None:intergenic | 65.0% | |
CCGACCGAGTCATCACGCCT+AGG | - | chr3.1:80123196-80123215 | MS.gene48445:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | + | chr3.1:80123970-80123989 | None:intergenic | 65.0% | |
CTCATACGCAGGGTCCGGGA+AGG | + | chr3.1:80123985-80124004 | None:intergenic | 65.0% | |
CTCCCTCATACGCAGGGTCC+GGG | + | chr3.1:80123989-80124008 | None:intergenic | 65.0% | |
CTTCCCGGACCCTGCGTATG+AGG | - | chr3.1:80123983-80124002 | MS.gene48445:intron | 65.0% | |
GCAAATGGGCAAGGGGCCCT+TGG | - | chr3.1:80128616-80128635 | MS.gene48445:CDS | 65.0% | |
GCTCCCTCATACGCAGGGTC+CGG | + | chr3.1:80123990-80124009 | None:intergenic | 65.0% | |
! | CGGTCCGGTTCGCGGTACAA+TGG | - | chr3.1:80123278-80123297 | MS.gene48445:CDS | 65.0% |
! | GCGGAGAAGGTGGCGGTGAA+AGG | + | chr3.1:80123120-80123139 | None:intergenic | 65.0% |
!! | AAGGTTGGTGACGGCGGTGG+CGG | + | chr3.1:80123101-80123120 | None:intergenic | 65.0% |
!! | CGGCGGTGGCGGAGAATGAT+TGG | + | chr3.1:80123090-80123109 | None:intergenic | 65.0% |
GGTCCCCGGGACGTGTCTAG+TGG | - | chr3.1:80127983-80128002 | MS.gene48445:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 80123012 | 80128908 | 80123012 | ID=MS.gene48445 |
chr3.1 | mRNA | 80123012 | 80128908 | 80123012 | ID=MS.gene48445.t1;Parent=MS.gene48445 |
chr3.1 | exon | 80128579 | 80128908 | 80128579 | ID=MS.gene48445.t1.exon1;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80128579 | 80128908 | 80128579 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80128430 | 80128486 | 80128430 | ID=MS.gene48445.t1.exon2;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80128430 | 80128486 | 80128430 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80127392 | 80127502 | 80127392 | ID=MS.gene48445.t1.exon3;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80127392 | 80127502 | 80127392 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80127140 | 80127226 | 80127140 | ID=MS.gene48445.t1.exon4;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80127140 | 80127226 | 80127140 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80126928 | 80127041 | 80126928 | ID=MS.gene48445.t1.exon5;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80126928 | 80127041 | 80126928 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80126632 | 80126838 | 80126632 | ID=MS.gene48445.t1.exon6;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80126632 | 80126838 | 80126632 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80125405 | 80125542 | 80125405 | ID=MS.gene48445.t1.exon7;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80125405 | 80125542 | 80125405 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80124093 | 80124254 | 80124093 | ID=MS.gene48445.t1.exon8;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80124093 | 80124254 | 80124093 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80123762 | 80123961 | 80123762 | ID=MS.gene48445.t1.exon9;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80123762 | 80123961 | 80123762 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80123274 | 80123357 | 80123274 | ID=MS.gene48445.t1.exon10;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80123274 | 80123357 | 80123274 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
chr3.1 | exon | 80123012 | 80123153 | 80123012 | ID=MS.gene48445.t1.exon11;Parent=MS.gene48445.t1 |
chr3.1 | CDS | 80123012 | 80123153 | 80123012 | ID=cds.MS.gene48445.t1;Parent=MS.gene48445.t1 |
Gene Sequence |
Protein sequence |