AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70102


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70102.t1 MTR_8g100040 96.004 926 3 1 1 892 1 926 0.0 1784
MS.gene70102.t1 MTR_3g102830 92.449 927 35 2 1 892 1 927 0.0 1721
MS.gene70102.t1 MTR_3g498725 86.609 926 86 3 1 892 1 922 0.0 1577
MS.gene70102.t1 MTR_3g461000 49.212 825 310 14 95 877 1 758 0.0 734
MS.gene70102.t1 MTR_3g098310 43.917 863 395 13 95 877 100 953 0.0 691
MS.gene70102.t1 MTR_6g013660 43.131 888 375 16 89 868 71 936 0.0 670
MS.gene70102.t1 MTR_7g012820 42.273 880 375 14 97 868 86 940 0.0 659
MS.gene70102.t1 MTR_3g106160 40.000 970 430 14 5 868 26 949 0.0 658
MS.gene70102.t1 MTR_7g012820 42.159 880 376 13 97 868 15 869 0.0 655
MS.gene70102.t1 MTR_4g109450 39.227 905 418 15 97 891 4 886 0.0 600
MS.gene70102.t1 MTR_7g028970 40.341 880 399 17 98 875 5 860 0.0 575
MS.gene70102.t1 MTR_4g109450 40.408 834 374 14 97 829 4 815 0.0 573
MS.gene70102.t1 MTR_3g098310 42.529 696 314 10 95 711 100 788 6.42e-176 529
MS.gene70102.t1 MTR_2g099075 40.606 330 179 3 547 875 143 456 5.76e-76 256
MS.gene70102.t1 MTR_2g006950 36.962 395 216 7 473 864 11 375 1.32e-71 248
MS.gene70102.t1 MTR_2g006950 33.803 213 109 5 667 875 371 555 6.63e-27 117
MS.gene70102.t1 MTR_6g048860 90.083 121 8 1 231 351 112 228 2.29e-64 221
MS.gene70102.t1 MTR_1g076440 84.762 105 16 0 128 232 7 111 5.25e-50 179
MS.gene70102.t1 MTR_1g076440 65.891 129 33 2 635 763 158 275 1.81e-42 157
MS.gene70102.t1 MTR_1g076440 91.892 37 1 1 856 892 276 310 4.84e-12 68.6
MS.gene70102.t1 MTR_1614s0010 37.313 201 107 4 642 840 1 184 3.45e-29 115
MS.gene70102.t1 MTR_5g098360 41.000 100 58 1 557 656 69 167 1.51e-19 87.4
MS.gene70102.t1 MTR_5g011550 25.373 201 144 4 29 224 15 214 1.30e-12 68.9
MS.gene70102.t1 MTR_7g096480 29.661 118 50 1 544 661 11 95 2.15e-11 65.5
MS.gene70102.t1 MTR_4g129230 26.946 167 99 3 561 727 657 800 7.96e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70102.t1 AT5G50920 82.239 929 122 5 2 892 5 928 0.0 1471
MS.gene70102.t1 AT3G48870 80.488 902 133 3 31 892 22 920 0.0 1403
MS.gene70102.t1 AT3G48870 80.488 902 133 3 31 892 53 951 0.0 1402
MS.gene70102.t1 AT3G48870 80.488 902 133 3 31 892 53 951 0.0 1402
MS.gene70102.t1 AT3G48870 80.488 902 133 3 31 892 53 951 0.0 1402
MS.gene70102.t1 AT5G51070 45.858 857 376 12 94 872 78 924 0.0 714
MS.gene70102.t1 AT2G25140 42.123 895 388 16 90 875 77 950 0.0 654
MS.gene70102.t1 AT5G15450 42.694 876 376 13 97 868 80 933 0.0 652
MS.gene70102.t1 AT1G74310 40.181 886 411 14 97 885 4 867 0.0 608
MS.gene70102.t1 AT1G74310 40.843 830 373 13 97 829 4 812 0.0 582
MS.gene70102.t1 AT4G14670 41.021 568 222 10 190 665 77 623 2.48e-124 389
MS.gene70102.t1 AT3G45450 56.583 357 90 6 95 423 1 320 9.12e-107 333
MS.gene70102.t1 AT4G30350 30.994 171 105 3 557 727 563 720 1.20e-13 75.9
MS.gene70102.t1 AT4G12060 31.111 135 90 2 91 222 86 220 1.71e-11 65.9
MS.gene70102.t1 AT4G25370 28.906 128 88 2 98 222 85 212 8.97e-11 63.5

Find 249 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAGTGACAGAGAGATTT+AGG 0.125238 4.1:-6963739 MS.gene70102:CDS
TTCAGTATTTGTATGGTTTC+AGG 0.145881 4.1:+6965636 None:intergenic
TTCTTTCCCTCTATGGTTTC+GGG 0.165534 4.1:+6966417 None:intergenic
CAGATTCTATTGGGTCTTAT+TGG 0.178181 4.1:-6967572 MS.gene70102:CDS
AGCACGTGTTCTTGAAAATT+TGG 0.179133 4.1:-6966982 MS.gene70102:CDS
CGGATCTGAGCACTTGCTTT+TGG 0.186791 4.1:-6967033 MS.gene70102:CDS
GTCAAAATCACAGGGAAAAT+TGG 0.189560 4.1:-6966592 MS.gene70102:intron
AAAATAATCCTTGTCTTATT+GGG 0.195129 4.1:-6966506 MS.gene70102:CDS
CTCTGCTAGCTTGGTCAAAT+TGG 0.202101 4.1:+6966707 None:intergenic
ACATTACACAAACGCATTAT+TGG 0.214703 4.1:-6964457 MS.gene70102:CDS
ATTACGTACTTTGAATTCTT+TGG 0.223172 4.1:-6967792 MS.gene70102:CDS
CTTCTTTCCCTCTATGGTTT+CGG 0.225647 4.1:+6966416 None:intergenic
CACTGAGAGTTCAATCTCTT+TGG 0.226936 4.1:+6963754 None:intergenic
CTGTTAGCCTCCCATCTTCT+AGG 0.244391 4.1:+6964071 None:intergenic
ACCAACCTTCTTTCCCTCTA+TGG 0.244485 4.1:+6966410 None:intergenic
TCAAGACCTCTTGCCTCTTC+AGG 0.272725 4.1:+6965042 None:intergenic
AGGAATCATGTCGAGGGTTT+TGG 0.273755 4.1:-6967954 None:intergenic
ACGAGCCATAATGCGACTTT+TGG 0.309688 4.1:-6963663 MS.gene70102:CDS
GTTGGCTCTGGCACTTTAAC+AGG 0.313503 4.1:+6965663 None:intergenic
AAGCTGGCGATTGGCCTGTT+AGG 0.315733 4.1:+6964370 None:intergenic
AGCTGTCGCATCAATATATT+AGG 0.322138 4.1:-6965542 MS.gene70102:intron
CGCATTATGGCTCGTCTTAG+AGG 0.322921 4.1:+6963671 None:intergenic
TCTTGATATGAGTGAATTCA+TGG 0.325696 4.1:-6964257 MS.gene70102:CDS
TCAGGAGGAGGCAAGGCGGC+TGG 0.337825 4.1:-6967618 MS.gene70102:CDS
TGGAACTGAACAGATTCTAT+TGG 0.339561 4.1:-6967582 MS.gene70102:CDS
GTCCTCCAAAAGTCGCATTA+TGG 0.346892 4.1:+6963658 None:intergenic
GTCGAGGTAGAGAAGATAAT+TGG 0.347679 4.1:-6967485 MS.gene70102:CDS
GCACGTGTTCTTGAAAATTT+GGG 0.360653 4.1:-6966981 MS.gene70102:CDS
GTAGGTTATAACCCTAGATA+TGG 0.368738 4.1:-6966200 MS.gene70102:intron
CTACAAGTAGACCCATATCT+AGG 0.370031 4.1:+6966188 None:intergenic
TTTCAGGCAACTCACTAAAC+TGG 0.370563 4.1:-6963831 MS.gene70102:CDS
GTGAGGGTGCTGATAGTGTT+GGG 0.370689 4.1:-6966788 MS.gene70102:CDS
CTCAGTGACAGAGAGATTTA+GGG 0.374480 4.1:-6963738 MS.gene70102:CDS
TGAACGTGTCACTCAAATCT+TGG 0.375274 4.1:-6966541 MS.gene70102:CDS
TGGAGGTGAACCAATGAGTT+TGG 0.375955 4.1:+6964219 None:intergenic
CTCTTGGCACGTGGGGTAAA+CGG 0.377703 4.1:+6967431 None:intergenic
AGAGCATCTGGCAATGAATC+TGG 0.383859 4.1:+6963527 None:intergenic
TTTCCAGGTCACAATTATAT+CGG 0.383974 4.1:-6967053 MS.gene70102:intron
GGAACTGAACAGATTCTATT+GGG 0.395625 4.1:-6967581 MS.gene70102:CDS
CCTTGTCTTATTGGGGAACC+TGG 0.397535 4.1:-6966498 MS.gene70102:CDS
TCCCGAGTAACTAGACAGTC+TGG 0.401943 4.1:+6967814 None:intergenic
AAGTCCTTTCAGTATTTGTA+TGG 0.403240 4.1:+6965629 None:intergenic
AAGGTTATAATCCTAGTTAT+GGG 0.408036 4.1:-6963700 MS.gene70102:CDS
CCACAACTCTAGATGAATAT+AGG 0.408234 4.1:-6965728 MS.gene70102:CDS
AAGATAATTGGAAGGGGAAG+TGG 0.413810 4.1:-6967473 MS.gene70102:CDS
AAAATACTTATGCAGTGTAT+AGG 0.417632 4.1:-6965753 MS.gene70102:intron
GAAGGTTATAATCCTAGTTA+TGG 0.419366 4.1:-6963701 MS.gene70102:CDS
GTTGGGGCTACCGTTGGCTC+TGG 0.423794 4.1:-6966771 MS.gene70102:CDS
GGTCTTATTGGTGAAGGAAC+TGG 0.424307 4.1:-6967560 MS.gene70102:CDS
TGGGAGGCTAACAGATAGTA+AGG 0.426292 4.1:-6964062 MS.gene70102:CDS
TTAGGCCAGAGTTCTTGAAT+AGG 0.427859 4.1:-6963871 MS.gene70102:CDS
ATGCCAACTTTGGAGGAGTA+TGG 0.429557 4.1:-6966732 MS.gene70102:CDS
GAGAGTCTTGGAACTCTCAT+TGG 0.431062 4.1:-6967411 MS.gene70102:CDS
TACAACATATTGTTGCCTCT+TGG 0.434175 4.1:-6964543 MS.gene70102:CDS
CATATTGTTGCCTCTTGGAC+TGG 0.442718 4.1:-6964538 MS.gene70102:CDS
GAGGTCTTGAAAAGGAAGTT+AGG 0.443885 4.1:-6965029 MS.gene70102:CDS
AAGCAGTAGAAGCCATTAGC+AGG 0.446141 4.1:-6964426 MS.gene70102:CDS
GCATTGGCCTCATACTACTT+TGG 0.446338 4.1:-6964301 MS.gene70102:CDS
GCCTGGGTGCGAATATTAGT+TGG 0.447285 4.1:+6966951 None:intergenic
CAGGAGGAGGCAAGGCGGCT+GGG 0.447536 4.1:-6967617 MS.gene70102:CDS
TCAACCGAGACTTTGTCAAC+AGG 0.449665 4.1:+6964511 None:intergenic
TGGAATCGCCTCTCCAAAGC+TGG 0.451335 4.1:+6965687 None:intergenic
ATCAAATCTATAGCTTTGTC+AGG 0.451675 4.1:+6965193 None:intergenic
GGTGAGGGTGCTGATAGTGT+TGG 0.456497 4.1:-6966789 MS.gene70102:CDS
AGTTACCTCCTCTGCTAGCT+TGG 0.457680 4.1:+6966698 None:intergenic
TAACAATAAGATGCCAACTT+TGG 0.458624 4.1:-6966742 MS.gene70102:CDS
TTGGACTTAAGAACCCTAAC+AGG 0.460747 4.1:-6964384 MS.gene70102:CDS
GTGCATGTTGAAGTCGGACT+CGG 0.460857 4.1:+6965155 None:intergenic
AACAAGGCAGAGAGTGAGGC+AGG 0.463527 4.1:-6964598 MS.gene70102:CDS
AGCATCATGTTGAAGACATC+AGG 0.464962 4.1:+6964100 None:intergenic
AGCTGGCGATTGGCCTGTTA+GGG 0.465113 4.1:+6964371 None:intergenic
TCGACGGATAGCCCTGCTAA+TGG 0.465463 4.1:+6964414 None:intergenic
AGGAACTGGTATTGCGGCTA+AGG 0.466745 4.1:-6967546 MS.gene70102:CDS
AAACTCATTGGTTCACCTCC+AGG 0.469560 4.1:-6964217 MS.gene70102:CDS
AGGAGCTGAAACAATACTTT+AGG 0.470372 4.1:-6963889 MS.gene70102:CDS
GAGAGTGAGGCAGGAGATGT+AGG 0.476103 4.1:-6964589 MS.gene70102:CDS
GATAGCGGATATAATGTTGA+AGG 0.477705 4.1:-6963798 MS.gene70102:CDS
GTCAACTGACTGAGGCAGTT+CGG 0.478584 4.1:-6964171 MS.gene70102:CDS
TGGCTGAAAAGATGCTTGCT+AGG 0.481331 4.1:-6963631 MS.gene70102:CDS
ATGCTTCAAATCCTAGAAGA+TGG 0.482486 4.1:-6964082 MS.gene70102:CDS
AGAGCTAAGGGATAAAGAAA+TGG 0.482796 4.1:-6964668 MS.gene70102:CDS
AGAGGCCTGGCCCCATAACT+AGG 0.483439 4.1:+6963689 None:intergenic
TGTGGCTGCCTACCCACAAC+AGG 0.484594 4.1:+6966567 None:intergenic
GAACGTGTCACTCAAATCTT+GGG 0.488197 4.1:-6966540 MS.gene70102:CDS
ACCCAGACTGTCTAGTTACT+CGG 0.490173 4.1:-6967816 MS.gene70102:CDS
CACACAGTCTCCAAACTCAT+TGG 0.490778 4.1:-6964229 MS.gene70102:CDS
ACTCATATCAAGACGAATCA+TGG 0.492017 4.1:+6964267 None:intergenic
CAAAGTAATTATGTTGGCTC+AGG 0.492161 4.1:-6967636 MS.gene70102:CDS
ACTCACTAAACTGGAGGTTA+AGG 0.492407 4.1:-6963822 MS.gene70102:CDS
CTTGCTCAACGGATTGCAAA+TGG 0.493862 4.1:-6966447 MS.gene70102:CDS
TATGGCTCGTCTTAGAGGCC+TGG 0.495631 4.1:+6963676 None:intergenic
GTCTGAATTGGCTAAGGCAT+TGG 0.499413 4.1:-6964317 MS.gene70102:CDS
GCACCTTAGAATGAAAATCT+TGG 0.499615 4.1:+6967750 None:intergenic
TGAGTGACACGTTCAATTTG+TGG 0.499806 4.1:+6966549 None:intergenic
ATAGATTTGATTGATGAAGC+TGG 0.500246 4.1:-6965181 MS.gene70102:CDS
TCAAAGAGTACAACCGTGTA+GGG 0.502030 4.1:+6964142 None:intergenic
CCTATATTCATCTAGAGTTG+TGG 0.502316 4.1:+6965728 None:intergenic
GGAAGTTAGGCAGATAGTAA+AGG 0.502653 4.1:-6965016 MS.gene70102:CDS
TCTAAGGTGCTCACTCAGAT+TGG 0.504328 4.1:-6967737 MS.gene70102:CDS
GGGAAAATTGGATCCTGTTG+TGG 0.505719 4.1:-6966580 MS.gene70102:CDS
AGAGGGCGACTCTGTTATAG+TGG 0.506335 4.1:-6963600 MS.gene70102:CDS
TGGTGTGGGGAAGTCTGAAT+TGG 0.506886 4.1:-6964329 MS.gene70102:CDS
GTTTCAGGAACAGTTGGCTC+TGG 0.507634 4.1:+6965651 None:intergenic
GGAAAATTGGATCCTGTTGT+GGG 0.508304 4.1:-6966579 MS.gene70102:CDS
AATGTCCCTGGTCTAGTGGC+TGG 0.508918 4.1:-6967920 MS.gene70102:CDS
ATCTGATCGTCTTCTCAAGA+TGG 0.509066 4.1:-6964485 MS.gene70102:CDS
CAATAAGATGCCAACTTTGG+AGG 0.509184 4.1:-6966739 MS.gene70102:CDS
CTTCGACCAGCCACTAGACC+AGG 0.509991 4.1:+6967914 None:intergenic
GGAAGCAGTGTGATCGAGAA+AGG 0.510531 4.1:-6963989 MS.gene70102:CDS
TGAGAGTTCCAAGACTCTCT+TGG 0.510742 4.1:+6967415 None:intergenic
ATACTTGCAGTTACCTGAAG+AGG 0.512391 4.1:-6965055 MS.gene70102:intron
TCAGTATAACCAACATATCC+TGG 0.513853 4.1:+6964199 None:intergenic
CTGAATAGGCTGGAGAGCTA+AGG 0.514789 4.1:-6964681 MS.gene70102:intron
CTTATAATGACATCAAATGT+TGG 0.515383 4.1:-6964010 MS.gene70102:CDS
AGTAATTATGTTGGCTCAGG+AGG 0.515651 4.1:-6967633 MS.gene70102:CDS
GCTCTGGCACTTTAACAGGT+TGG 0.519765 4.1:+6965667 None:intergenic
TTCAGATCCAAAGTAGTATG+AGG 0.520690 4.1:+6964294 None:intergenic
GGTTCACCTCCAGGATATGT+TGG 0.521392 4.1:-6964208 MS.gene70102:CDS
CTATTGGGTCTTATTGGTGA+AGG 0.521471 4.1:-6967566 MS.gene70102:CDS
GTGCCATACTCCTCCAAAGT+TGG 0.521933 4.1:+6966729 None:intergenic
TTGGAGGAAGCTCGTCAACT+TGG 0.522024 4.1:-6967392 MS.gene70102:intron
AAAGTATTGTTTCAGCTCCT+CGG 0.523545 4.1:+6963892 None:intergenic
CTCTGTAAAACGCTCAAACA+TGG 0.524422 4.1:+6967667 None:intergenic
GAAAAGATGAAGCTGGCGAT+TGG 0.524522 4.1:+6964361 None:intergenic
GATTGGTACTAATCGAGCTA+AGG 0.525728 4.1:-6967720 MS.gene70102:CDS
AATTATGTTGGCTCAGGAGG+AGG 0.526333 4.1:-6967630 MS.gene70102:CDS
TGTATGGTTTCAGGAACAGT+TGG 0.528654 4.1:+6965645 None:intergenic
GCGCAGTCGATTAATGTCCC+TGG 0.531046 4.1:-6967932 MS.gene70102:CDS
ATGGCTGTCTTTCCGACACC+AGG 0.532374 4.1:+6966480 None:intergenic
CTGGTCTAGTGGCTGGTCGA+AGG 0.533789 4.1:-6967913 MS.gene70102:CDS
AAATAATCCTTGTCTTATTG+GGG 0.534007 4.1:-6966505 MS.gene70102:CDS
GAGAAAGGAGGCCGTCGCAT+AGG 0.534709 4.1:-6963974 MS.gene70102:CDS
TCTTGCTAGAGGTGAACTAC+AGG 0.537146 4.1:-6966001 MS.gene70102:intron
TCCAAGACTCTCTTGGCACG+TGG 0.537851 4.1:+6967422 None:intergenic
GGTAGAGAAGATAATTGGAA+GGG 0.540976 4.1:-6967480 MS.gene70102:CDS
ATTGTGCTCAACGGTAGTAC+TGG 0.541363 4.1:-6963554 MS.gene70102:CDS
GTTATTCGCATGGTTGGTGA+GGG 0.544259 4.1:-6966804 MS.gene70102:CDS
ATAATCCTAGTTATGGGGCC+AGG 0.544978 4.1:-6963694 MS.gene70102:CDS
AGGTAGAGAAGATAATTGGA+AGG 0.545059 4.1:-6967481 MS.gene70102:CDS
GTAGAGAAGATAATTGGAAG+GGG 0.545295 4.1:-6967479 MS.gene70102:CDS
CAAGAGCCTCATCAGTATAA+CGG 0.549394 4.1:+6965577 None:intergenic
AGAGGCAAGAGGTCTTGAAA+AGG 0.550450 4.1:-6965037 MS.gene70102:CDS
TGAATAGGCTGGAGAGCTAA+GGG 0.551002 4.1:-6964680 MS.gene70102:intron
TTAGAATGAAAATCTTGGCC+AGG 0.551842 4.1:+6967755 None:intergenic
AATCGAGCTAAGGGTGGTAG+AGG 0.552487 4.1:-6967710 MS.gene70102:CDS
CGAAACCATAGAGGGAAAGA+AGG 0.554723 4.1:-6966415 MS.gene70102:intron
GATAGTGTTGGGGCTACCGT+TGG 0.556248 4.1:-6966777 MS.gene70102:CDS
GGCTGAAAAGATGCTTGCTA+GGG 0.556352 4.1:-6963630 MS.gene70102:CDS
TGCATGTTGAAGTCGGACTC+GGG 0.557579 4.1:+6965156 None:intergenic
AGCTATCAAAGTAATTATGT+TGG 0.558080 4.1:-6967642 MS.gene70102:CDS
GGTTATTCGCATGGTTGGTG+AGG 0.559144 4.1:-6966805 MS.gene70102:CDS
TCGCAACCAAGAGTTTGAAA+AGG 0.559598 4.1:-6964977 MS.gene70102:intron
TGCTTCAAATCCTAGAAGAT+GGG 0.561107 4.1:-6964081 MS.gene70102:CDS
AGTCTTGGAACTCTCATTGG+AGG 0.561170 4.1:-6967408 MS.gene70102:CDS
TCAAGCCTATTCAAGAACTC+TGG 0.561431 4.1:+6963866 None:intergenic
CCCACGTGCCAAGAGAGTCT+TGG 0.563576 4.1:-6967423 MS.gene70102:CDS
TTGCTGAAGGTCTTGCTCAA+CGG 0.563976 4.1:-6966458 MS.gene70102:CDS
GATGAACAAGGCAGAGAGTG+AGG 0.564477 4.1:-6964602 MS.gene70102:CDS
CCCAGACTGTCTAGTTACTC+GGG 0.564773 4.1:-6967815 MS.gene70102:CDS
TACAAGTAGACCCATATCTA+GGG 0.567209 4.1:+6966189 None:intergenic
GATTAATGTCCCTGGTCTAG+TGG 0.568714 4.1:-6967924 MS.gene70102:CDS
TGACCTTGACTATGATGAGA+AGG 0.570760 4.1:-6963948 MS.gene70102:CDS
ATTGGAGCAGGAGCAGCTGA+AGG 0.572423 4.1:-6966057 MS.gene70102:intron
TTGGAGCAGGAGCAGCTGAA+GGG 0.573404 4.1:-6966056 MS.gene70102:intron
GGTCTTCTTAGAGAGGGTGA+AGG 0.574148 4.1:-6967011 MS.gene70102:CDS
GAACAGGTTATTCGCATGGT+TGG 0.577586 4.1:-6966810 MS.gene70102:intron
AGCTGAAGGGGCAATTGATG+CGG 0.578062 4.1:-6966043 MS.gene70102:CDS
AGAGAGATTTAGGGAGAGAG+TGG 0.578335 4.1:-6963729 MS.gene70102:CDS
CAGGCAACTCACTAAACTGG+AGG 0.580885 4.1:-6963828 MS.gene70102:CDS
ATGGGAACAGGTTATTCGCA+TGG 0.580936 4.1:-6966814 MS.gene70102:intron
ATTGGTACTAATCGAGCTAA+GGG 0.582672 4.1:-6967719 MS.gene70102:CDS
TTTCTGGCCCTACTGGTGTG+GGG 0.583111 4.1:-6964342 MS.gene70102:CDS
AGTTCACCTCTAGCAAGAGC+TGG 0.583470 4.1:+6966006 None:intergenic
TGGAGCAGGAGCAGCTGAAG+GGG 0.584707 4.1:-6966055 MS.gene70102:intron
TAGGTTATAACCCTAGATAT+GGG 0.587092 4.1:-6966199 MS.gene70102:CDS
CATCAGTATAACGGAGCTTG+TGG 0.587701 4.1:+6965586 None:intergenic
GCTATCCGTCGAGCTCGTGT+TGG 0.588676 4.1:-6964403 MS.gene70102:CDS
TTGGATTCAATGTTTAGACC+TGG 0.588863 4.1:-6967773 MS.gene70102:CDS
CTTATTGGGGAACCTGGTGT+CGG 0.589543 4.1:-6966492 MS.gene70102:CDS
GATATGGGTCTACTTGTAGC+GGG 0.589741 4.1:-6966184 MS.gene70102:CDS
TTATAACAGAATCAAGAGCT+TGG 0.591045 4.1:-6963918 MS.gene70102:CDS
GCTTGCTAGGGAGATTAAAG+AGG 0.591894 4.1:-6963618 MS.gene70102:CDS
GGATATGTTGGTTATACTGA+GGG 0.591922 4.1:-6964196 MS.gene70102:CDS
AGGGCCAGAAAAGATGAAGC+TGG 0.593390 4.1:+6964354 None:intergenic
TGATGTCCCCGAAACCATAG+AGG 0.595369 4.1:-6966424 MS.gene70102:CDS
TCAGACTTCCCCACACCAGT+AGG 0.597091 4.1:+6964334 None:intergenic
GGAAAGACAGCCATTGCTGA+AGG 0.598239 4.1:-6966471 MS.gene70102:CDS
TCTTAGAGAGGGTGAAGGTG+TGG 0.599604 4.1:-6967006 MS.gene70102:CDS
AGTTCGGCGTCGTCCCTACA+CGG 0.600953 4.1:-6964155 MS.gene70102:CDS
TGAGGGTGCTGATAGTGTTG+GGG 0.601686 4.1:-6966787 MS.gene70102:CDS
GGGGAAGTCTGAATTGGCTA+AGG 0.601878 4.1:-6964323 MS.gene70102:CDS
TAAGTCCAACACGAGCTCGA+CGG 0.602184 4.1:+6964398 None:intergenic
TCTTTCCCTCTATGGTTTCG+GGG 0.604706 4.1:+6966418 None:intergenic
CAATTCAGGAATCATGTCGA+GGG 0.605004 4.1:-6967960 None:intergenic
CCCGAGTAACTAGACAGTCT+GGG 0.606554 4.1:+6967815 None:intergenic
TATCCCTGTTGACAAAGTCT+CGG 0.606924 4.1:-6964515 MS.gene70102:CDS
TGTTGGCTCAGGAGGAGGCA+AGG 0.607258 4.1:-6967625 MS.gene70102:CDS
TTTGACCAAGCTAGCAGAGG+AGG 0.607369 4.1:-6966703 MS.gene70102:intron
CAGACTTCCCCACACCAGTA+GGG 0.610250 4.1:+6964335 None:intergenic
AGCGGATATAATGTTGAAGG+AGG 0.610347 4.1:-6963795 MS.gene70102:CDS
CATGTTGAAGACATCAGGAT+GGG 0.610516 4.1:+6964105 None:intergenic
GAAACCATACAAATACTGAA+AGG 0.611115 4.1:-6965633 MS.gene70102:CDS
CCTAAAAGATGCACGTGTCG+AGG 0.614327 4.1:-6967501 MS.gene70102:CDS
AGTCCGACTTCAACATGCAC+AGG 0.614688 4.1:-6965152 MS.gene70102:intron
TGGTGAAGGAACTGGTATTG+CGG 0.615599 4.1:-6967552 MS.gene70102:CDS
CAGTTACCTGAAGAGGCAAG+AGG 0.619646 4.1:-6965048 MS.gene70102:CDS
GTTACTACTTCCAGAGCCAA+CGG 0.622846 4.1:+6966761 None:intergenic
CCAAGACTCTCTTGGCACGT+GGG 0.623311 4.1:+6967423 None:intergenic
TTGAAGCCAGCTCTTGCTAG+AGG 0.624182 4.1:-6966012 MS.gene70102:CDS
CAAGACTCTCTTGGCACGTG+GGG 0.624750 4.1:+6967424 None:intergenic
AATTGGATCCTGTTGTGGGT+AGG 0.625477 4.1:-6966575 MS.gene70102:CDS
TTGAGCAAGACCTTCAGCAA+TGG 0.626338 4.1:+6966461 None:intergenic
TCATGTTGAAGACATCAGGA+TGG 0.628699 4.1:+6964104 None:intergenic
AAGGAGCAGCTAGATCAAGA+AGG 0.632838 4.1:-6967874 MS.gene70102:CDS
TGTCCTTCTCATCATAGTCA+AGG 0.633612 4.1:+6963945 None:intergenic
CAAGCTCCGTTATACTGATG+AGG 0.634549 4.1:-6965583 MS.gene70102:CDS
ATCAAAGAGTACAACCGTGT+AGG 0.635792 4.1:+6964141 None:intergenic
AATCAAGAGCTTGGTGACCG+AGG 0.635925 4.1:-6963909 MS.gene70102:CDS
AGGGAGAGAGTGGTCGACGA+AGG 0.636473 4.1:-6963719 MS.gene70102:CDS
AGGATATGTTGGTTATACTG+AGG 0.636582 4.1:-6964197 MS.gene70102:CDS
AGATATGGGTCTACTTGTAG+CGG 0.638102 4.1:-6966185 MS.gene70102:CDS
CAAGGTCAAATCCTATGCGA+CGG 0.639546 4.1:+6963963 None:intergenic
CAACCGAGACTTTGTCAACA+GGG 0.642126 4.1:+6964512 None:intergenic
ACTGGAGGTTAAGGAGATAG+CGG 0.642477 4.1:-6963813 MS.gene70102:CDS
ACAATTCAGGAATCATGTCG+AGG 0.643511 4.1:-6967961 None:intergenic
CTTGCTAGGGAGATTAAAGA+GGG 0.645642 4.1:-6963617 MS.gene70102:CDS
TTCGACCAGCCACTAGACCA+GGG 0.645722 4.1:+6967915 None:intergenic
ATACCTGTGCATGTTGAAGT+CGG 0.645864 4.1:+6965149 None:intergenic
AGCAGTAGAAGCCATTAGCA+GGG 0.646108 4.1:-6964425 MS.gene70102:CDS
TCTGGGTGCAGCAGTTCGTG+TGG 0.646472 4.1:+6967832 None:intergenic
AGGTTATAATCCTAGTTATG+GGG 0.648482 4.1:-6963699 MS.gene70102:CDS
GATGTCCCCGAAACCATAGA+GGG 0.650692 4.1:-6966423 MS.gene70102:CDS
TATGTTGGTTATACTGAGGG+TGG 0.650997 4.1:-6964193 MS.gene70102:CDS
CCAGGTTCCCCAATAAGACA+AGG 0.651573 4.1:+6966498 None:intergenic
ATATGAGTGAATTCATGGAA+AGG 0.652142 4.1:-6964252 MS.gene70102:CDS
GGGAGGCTAACAGATAGTAA+GGG 0.655267 4.1:-6964061 MS.gene70102:CDS
AACAGGGATACCAGTCCAAG+AGG 0.658998 4.1:+6964528 None:intergenic
ATAGTGGATGCTGATTCTGA+TGG 0.662089 4.1:-6963584 MS.gene70102:CDS
AGGCATGTCAATAACAACAA+AGG 0.662987 4.1:-6967893 MS.gene70102:CDS
TTCAAATCCTAGAAGATGGG+AGG 0.665767 4.1:-6964078 MS.gene70102:CDS
TCCAACTAATATTCGCACCC+AGG 0.666203 4.1:-6966952 MS.gene70102:intron
CAATTTGACCAAGCTAGCAG+AGG 0.667069 4.1:-6966706 MS.gene70102:CDS
AGATAGTAAGGGAAGAACTG+TGG 0.671130 4.1:-6964050 MS.gene70102:CDS
TGAGGGTGGTCAACTGACTG+AGG 0.676897 4.1:-6964179 MS.gene70102:CDS
AGCAGTGTGATCGAGAAAGG+AGG 0.677611 4.1:-6963986 MS.gene70102:CDS
GGTACTAATCGAGCTAAGGG+TGG 0.687277 4.1:-6967716 MS.gene70102:CDS
GGAAACGTGATTGTGCTCAA+CGG 0.722695 4.1:-6963563 MS.gene70102:CDS
GTATAACCAACATATCCTGG+AGG 0.727417 4.1:+6964202 None:intergenic
TGGCTCAGGAGGAGGCAAGG+CGG 0.734449 4.1:-6967622 MS.gene70102:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATCAAAAACAATTTA+TGG + chr4.1:6965099-6965118 None:intergenic 10.0%
!! TAAAATCAAAAACAATTTAT+GGG + chr4.1:6965098-6965117 None:intergenic 10.0%
!! TCATAAATTAAAATTGAAAA+CGG + chr4.1:6965982-6966001 None:intergenic 10.0%
!! ATTTGGATATATATAATTGA+AGG + chr4.1:6966715-6966734 None:intergenic 15.0%
!! CATAAATTAAAATTGAAAAC+GGG + chr4.1:6965981-6966000 None:intergenic 15.0%
!!! AATTGTTTTTGATTTTATTC+AGG - chr4.1:6965101-6965120 MS.gene70102:intron 15.0%
!!! ATTGTTTTACAACATTATTT+TGG - chr4.1:6966101-6966120 MS.gene70102:intron 15.0%
!!! ATTGTTTTTGATTTTATTCA+GGG - chr4.1:6965102-6965121 MS.gene70102:intron 15.0%
!!! GTTCTTTTGTTTATTTTATT+TGG - chr4.1:6964316-6964335 MS.gene70102:CDS 15.0%
!!! TAAATTCTTAATGATCATTT+TGG - chr4.1:6965653-6965672 MS.gene70102:CDS 15.0%
!!! TTCAATTTTAATTTATGATG+TGG - chr4.1:6965984-6966003 MS.gene70102:intron 15.0%
!! AAAAATAATCCTTGTCTTAT+TGG - chr4.1:6964957-6964976 MS.gene70102:intron 20.0%
!! AAAATATAATGTAATCTCAC+TGG + chr4.1:6966589-6966608 None:intergenic 20.0%
!! AAATAAACAAAAGAACAGAA+AGG + chr4.1:6964312-6964331 None:intergenic 20.0%
!! AATGTTGTAAAACAATTCAA+AGG + chr4.1:6966097-6966116 None:intergenic 20.0%
!! GAAAGATTGAAAAAAACTAA+TGG - chr4.1:6965328-6965347 MS.gene70102:intron 20.0%
!!! AAAATAATCCTTGTCTTATT+GGG - chr4.1:6964958-6964977 MS.gene70102:intron 20.0%
!!! AATAAGACAAGGATTATTTT+TGG + chr4.1:6964958-6964977 None:intergenic 20.0%
!!! AGAGAATTTTTTTATAGTTC+TGG - chr4.1:6966010-6966029 MS.gene70102:CDS 20.0%
!!! TTGTTTTTGATTTTATTCAG+GGG - chr4.1:6965103-6965122 MS.gene70102:intron 20.0%
! AAAATACTTATGCAGTGTAT+AGG - chr4.1:6965711-6965730 MS.gene70102:CDS 25.0%
! AAATTCCAGATGATTAACTT+CGG + chr4.1:6966065-6966084 None:intergenic 25.0%
! AAGGTTATAATCCTAGTTAT+GGG - chr4.1:6967764-6967783 MS.gene70102:CDS 25.0%
! AGATTGAAAAAAACTAATGG+AGG - chr4.1:6965331-6965350 MS.gene70102:intron 25.0%
! AGCACTTATAGAAAAAAACA+AGG - chr4.1:6966838-6966857 MS.gene70102:intron 25.0%
! AGCTATCAAAGTAATTATGT+TGG - chr4.1:6963822-6963841 MS.gene70102:CDS 25.0%
! ATTACGTACTTTGAATTCTT+TGG - chr4.1:6963672-6963691 MS.gene70102:CDS 25.0%
! ATTTATTACCCAGAATGTAA+AGG + chr4.1:6966739-6966758 None:intergenic 25.0%
! CTGATTATAATTCTTAGATG+TGG - chr4.1:6965187-6965206 MS.gene70102:CDS 25.0%
! CTGGTATTACATGTTTAAAT+GGG - chr4.1:6966029-6966048 MS.gene70102:CDS 25.0%
! CTTATAATGACATCAAATGT+TGG - chr4.1:6967454-6967473 MS.gene70102:CDS 25.0%
! GTTGAAATTTATCCATGAAT+TGG - chr4.1:6964265-6964284 MS.gene70102:CDS 25.0%
! TCTGGTATTACATGTTTAAA+TGG - chr4.1:6966028-6966047 MS.gene70102:CDS 25.0%
! TGATACCTTAATTTCTGAAT+AGG - chr4.1:6966769-6966788 MS.gene70102:CDS 25.0%
!! AAATAATCCTTGTCTTATTG+GGG - chr4.1:6964959-6964978 MS.gene70102:intron 25.0%
!! TTGATGAAATGATTGTTTTC+AGG - chr4.1:6967617-6967636 MS.gene70102:CDS 25.0%
!!! ATGTGGAATTTTAGTACTTT+CGG - chr4.1:6965204-6965223 MS.gene70102:CDS 25.0%
!!! TGTTTTTGATTTTATTCAGG+GGG - chr4.1:6965104-6965123 MS.gene70102:intron 25.0%
AAAAAACAAGGAGATGAACA+AGG - chr4.1:6966850-6966869 MS.gene70102:intron 30.0%
AAGTCCTTTCAGTATTTGTA+TGG + chr4.1:6965838-6965857 None:intergenic 30.0%
ACATCACGAAAGAGAAAAAT+TGG + chr4.1:6964854-6964873 None:intergenic 30.0%
ACATTACACAAACGCATTAT+TGG - chr4.1:6967007-6967026 MS.gene70102:CDS 30.0%
ACATTCTGGGTAATAAATAG+TGG - chr4.1:6966741-6966760 MS.gene70102:CDS 30.0%
AGCAAAAATCAAGTCATGTT+TGG + chr4.1:6964196-6964215 None:intergenic 30.0%
AGGTTATAATCCTAGTTATG+GGG - chr4.1:6967765-6967784 MS.gene70102:CDS 30.0%
ATAGATTTGATTGATGAAGC+TGG - chr4.1:6966283-6966302 MS.gene70102:intron 30.0%
ATATGAGTGAATTCATGGAA+AGG - chr4.1:6967212-6967231 MS.gene70102:intron 30.0%
ATCCAAATTCCTTTACATTC+TGG - chr4.1:6966727-6966746 MS.gene70102:CDS 30.0%
ATCTTTCTTCAAATTCTCCA+CGG + chr4.1:6965315-6965334 None:intergenic 30.0%
ATGTAATCTCACTGGAAAAA+AGG + chr4.1:6966581-6966600 None:intergenic 30.0%
CATTCTGGGTAATAAATAGT+GGG - chr4.1:6966742-6966761 MS.gene70102:CDS 30.0%
CTATGAAATGTAAAGACTGA+AGG - chr4.1:6965681-6965700 MS.gene70102:CDS 30.0%
GAAACCATACAAATACTGAA+AGG - chr4.1:6965831-6965850 MS.gene70102:intron 30.0%
GAAGATAACAAGATAGAAGA+AGG + chr4.1:6966181-6966200 None:intergenic 30.0%
GAAGGTTATAATCCTAGTTA+TGG - chr4.1:6967763-6967782 MS.gene70102:CDS 30.0%
GTTGAGTATCCTAAAAATGT+GGG + chr4.1:6966556-6966575 None:intergenic 30.0%
TAACAATAAGATGCCAACTT+TGG - chr4.1:6964722-6964741 MS.gene70102:intron 30.0%
TAGGTTATAACCCTAGATAT+GGG - chr4.1:6965265-6965284 MS.gene70102:intron 30.0%
TCCAAATTCCTTTACATTCT+GGG - chr4.1:6966728-6966747 MS.gene70102:CDS 30.0%
TCTTGATATGAGTGAATTCA+TGG - chr4.1:6967207-6967226 MS.gene70102:intron 30.0%
TCTTTCCTAAAGTTCTATAG+CGG - chr4.1:6966645-6966664 MS.gene70102:intron 30.0%
TTAAACCGAAGTTAATCATC+TGG - chr4.1:6966057-6966076 MS.gene70102:intron 30.0%
TTATAACAGAATCAAGAGCT+TGG - chr4.1:6967546-6967565 MS.gene70102:CDS 30.0%
TTCAGTATTTGTATGGTTTC+AGG + chr4.1:6965831-6965850 None:intergenic 30.0%
TTGAGTATCCTAAAAATGTG+GGG + chr4.1:6966555-6966574 None:intergenic 30.0%
TTTCCAGGTCACAATTATAT+CGG - chr4.1:6964411-6964430 MS.gene70102:CDS 30.0%
TTTGTTTGAAGACATTGTAG+TGG - chr4.1:6966683-6966702 MS.gene70102:intron 30.0%
! CTACAGGTAATGTTTTCTTT+TGG - chr4.1:6965479-6965498 MS.gene70102:intron 30.0%
! TAACATAACCCCACATTTTT+AGG - chr4.1:6966544-6966563 MS.gene70102:CDS 30.0%
! TTCTTTTGGCATCTCAAAAA+TGG - chr4.1:6965493-6965512 MS.gene70102:intron 30.0%
!! ATCAAATCTATAGCTTTGTC+AGG + chr4.1:6966274-6966293 None:intergenic 30.0%
!! TGTGGAATTTTAGTACTTTC+GGG - chr4.1:6965205-6965224 MS.gene70102:CDS 30.0%
AAACAAAAGAACAGAAAGGC+CGG + chr4.1:6964308-6964327 None:intergenic 35.0%
AAAGATAAAACAGCCTTACG+TGG + chr4.1:6966630-6966649 None:intergenic 35.0%
AATCTTGTACTCCACTTGAT+GGG - chr4.1:6964632-6964651 MS.gene70102:CDS 35.0%
ACATAAATCACGCCAATTCA+TGG + chr4.1:6964280-6964299 None:intergenic 35.0%
ACCCAGAATGTAAAGGAATT+TGG + chr4.1:6966732-6966751 None:intergenic 35.0%
ACCTTAATTTCTGAATAGGC+TGG - chr4.1:6966773-6966792 MS.gene70102:CDS 35.0%
ACTCATATCAAGACGAATCA+TGG + chr4.1:6967200-6967219 None:intergenic 35.0%
AGAGCTAAGGGATAAAGAAA+TGG - chr4.1:6966796-6966815 MS.gene70102:CDS 35.0%
AGCACGTGTTCTTGAAAATT+TGG - chr4.1:6964482-6964501 MS.gene70102:CDS 35.0%
AGCTGTCGCATCAATATATT+AGG - chr4.1:6965922-6965941 MS.gene70102:intron 35.0%
AGGAGCTGAAACAATACTTT+AGG - chr4.1:6967575-6967594 MS.gene70102:CDS 35.0%
AGGCATGTCAATAACAACAA+AGG - chr4.1:6963571-6963590 MS.gene70102:CDS 35.0%
AGGTAGAGAAGATAATTGGA+AGG - chr4.1:6963983-6964002 MS.gene70102:CDS 35.0%
ATGATGACATAATACTTGCC+TGG + chr4.1:6964533-6964552 None:intergenic 35.0%
ATGCTTCAAATCCTAGAAGA+TGG - chr4.1:6967382-6967401 MS.gene70102:intron 35.0%
ATTGGTACTAATCGAGCTAA+GGG - chr4.1:6963745-6963764 MS.gene70102:CDS 35.0%
CATCTGTCATGAAGAAAACT+AGG + chr4.1:6964799-6964818 None:intergenic 35.0%
CATTGAAAAAGATCCAGCTT+TGG - chr4.1:6965764-6965783 MS.gene70102:intron 35.0%
CCACAACTCTAGATGAATAT+AGG - chr4.1:6965736-6965755 MS.gene70102:CDS 35.0%
CCTGGAAATTGCAAAATGTA+AGG + chr4.1:6964399-6964418 None:intergenic 35.0%
GAGCAAGTTAAACATGTTCA+AGG + chr4.1:6965158-6965177 None:intergenic 35.0%
GCACCTTAGAATGAAAATCT+TGG + chr4.1:6963717-6963736 None:intergenic 35.0%
GCACGTGTTCTTGAAAATTT+GGG - chr4.1:6964483-6964502 MS.gene70102:CDS 35.0%
GGAACTGAACAGATTCTATT+GGG - chr4.1:6963883-6963902 MS.gene70102:CDS 35.0%
GGTAGAGAAGATAATTGGAA+GGG - chr4.1:6963984-6964003 MS.gene70102:CDS 35.0%
GGTTGAGTATCCTAAAAATG+TGG + chr4.1:6966557-6966576 None:intergenic 35.0%
GTAGAGAAGATAATTGGAAG+GGG - chr4.1:6963985-6964004 MS.gene70102:CDS 35.0%
GTAGGTTATAACCCTAGATA+TGG - chr4.1:6965264-6965283 MS.gene70102:intron 35.0%
GTCAAAATCACAGGGAAAAT+TGG - chr4.1:6964872-6964891 MS.gene70102:intron 35.0%
TAATCTCACTGGAAAAAAGG+TGG + chr4.1:6966578-6966597 None:intergenic 35.0%
TAATCTTGTACTCCACTTGA+TGG - chr4.1:6964631-6964650 MS.gene70102:CDS 35.0%
TACAACATATTGTTGCCTCT+TGG - chr4.1:6966921-6966940 MS.gene70102:intron 35.0%
TACAAGTAGACCCATATCTA+GGG + chr4.1:6965278-6965297 None:intergenic 35.0%
TCAGTATAACCAACATATCC+TGG + chr4.1:6967268-6967287 None:intergenic 35.0%
TCCAGCCTATTCAGAAATTA+AGG + chr4.1:6966777-6966796 None:intergenic 35.0%
TGATGACATAATACTTGCCT+GGG + chr4.1:6964532-6964551 None:intergenic 35.0%
TGCTTCAAATCCTAGAAGAT+GGG - chr4.1:6967383-6967402 MS.gene70102:intron 35.0%
TGGAACTGAACAGATTCTAT+TGG - chr4.1:6963882-6963901 MS.gene70102:CDS 35.0%
TTAGAATGAAAATCTTGGCC+AGG + chr4.1:6963712-6963731 None:intergenic 35.0%
TTCAGATCCAAAGTAGTATG+AGG + chr4.1:6967173-6967192 None:intergenic 35.0%
TTCGTGATGTCAAAATCACA+GGG - chr4.1:6964864-6964883 MS.gene70102:intron 35.0%
TTGGATTCAATGTTTAGACC+TGG - chr4.1:6963691-6963710 MS.gene70102:CDS 35.0%
TTTCGTGATGTCAAAATCAC+AGG - chr4.1:6964863-6964882 MS.gene70102:intron 35.0%
! AGGATATGTTGGTTATACTG+AGG - chr4.1:6967267-6967286 MS.gene70102:intron 35.0%
! CAGATTCTATTGGGTCTTAT+TGG - chr4.1:6963892-6963911 MS.gene70102:CDS 35.0%
! CCTATATTCATCTAGAGTTG+TGG + chr4.1:6965739-6965758 None:intergenic 35.0%
! CCTTACATTTTGCAATTTCC+AGG - chr4.1:6964396-6964415 MS.gene70102:CDS 35.0%
! GCATTACCTTTTCAAACTCT+TGG + chr4.1:6966496-6966515 None:intergenic 35.0%
! GGATATGTTGGTTATACTGA+GGG - chr4.1:6967268-6967287 MS.gene70102:intron 35.0%
! TGATTTTATTCAGGGGGTAA+GGG - chr4.1:6965110-6965129 MS.gene70102:intron 35.0%
! TGGCCAAGATTTTCATTCTA+AGG - chr4.1:6963711-6963730 MS.gene70102:CDS 35.0%
! TTGATTTTATTCAGGGGGTA+AGG - chr4.1:6965109-6965128 MS.gene70102:intron 35.0%
!! AAAGTATTGTTTCAGCTCCT+CGG + chr4.1:6967575-6967594 None:intergenic 35.0%
!! CAAAGTAATTATGTTGGCTC+AGG - chr4.1:6963828-6963847 MS.gene70102:CDS 35.0%
!! CTAGTTTTCTTCATGACAGA+TGG - chr4.1:6964797-6964816 MS.gene70102:intron 35.0%
!! GATAGCGGATATAATGTTGA+AGG - chr4.1:6967666-6967685 MS.gene70102:CDS 35.0%
!! TTTTGCTTTGAGTGATCTGT+CGG - chr4.1:6964209-6964228 MS.gene70102:CDS 35.0%
!!! ATCTTTTAGGTTAATCCCCA+TGG + chr4.1:6963953-6963972 None:intergenic 35.0%
AACCTACATCATGCAGAACA+AGG + chr4.1:6965251-6965270 None:intergenic 40.0%
AAGATAATTGGAAGGGGAAG+TGG - chr4.1:6963991-6964010 MS.gene70102:CDS 40.0%
AATAACCTGTTCCCATCAAG+TGG + chr4.1:6964646-6964665 None:intergenic 40.0%
ACTCACTAAACTGGAGGTTA+AGG - chr4.1:6967642-6967661 MS.gene70102:CDS 40.0%
AGATAGTAAGGGAAGAACTG+TGG - chr4.1:6967414-6967433 MS.gene70102:CDS 40.0%
AGATATGGGTCTACTTGTAG+CGG - chr4.1:6965279-6965298 MS.gene70102:intron 40.0%
AGCATCATGTTGAAGACATC+AGG + chr4.1:6967367-6967386 None:intergenic 40.0%
AGCGGATATAATGTTGAAGG+AGG - chr4.1:6967669-6967688 MS.gene70102:CDS 40.0%
ATACCTGTGCATGTTGAAGT+CGG + chr4.1:6966318-6966337 None:intergenic 40.0%
ATACTTGCAGTTACCTGAAG+AGG - chr4.1:6966409-6966428 MS.gene70102:intron 40.0%
ATAGACGAGAAAAGAACTGC+TGG + chr4.1:6966363-6966382 None:intergenic 40.0%
ATCTGATCGTCTTCTCAAGA+TGG - chr4.1:6966979-6966998 MS.gene70102:CDS 40.0%
CAAAGCCGCTATAGAACTTT+AGG + chr4.1:6966653-6966672 None:intergenic 40.0%
CAAGAGCCTCATCAGTATAA+CGG + chr4.1:6965890-6965909 None:intergenic 40.0%
CAATAAGATGCCAACTTTGG+AGG - chr4.1:6964725-6964744 MS.gene70102:intron 40.0%
CACTGAGAGTTCAATCTCTT+TGG + chr4.1:6967713-6967732 None:intergenic 40.0%
CATGTTGAAGACATCAGGAT+GGG + chr4.1:6967362-6967381 None:intergenic 40.0%
CTACAAGTAGACCCATATCT+AGG + chr4.1:6965279-6965298 None:intergenic 40.0%
CTCAGTGACAGAGAGATTTA+GGG - chr4.1:6967726-6967745 MS.gene70102:CDS 40.0%
CTCTGTAAAACGCTCAAACA+TGG + chr4.1:6963800-6963819 None:intergenic 40.0%
CTTCTTTCCCTCTATGGTTT+CGG + chr4.1:6965051-6965070 None:intergenic 40.0%
CTTGCTAGGGAGATTAAAGA+GGG - chr4.1:6967847-6967866 MS.gene70102:CDS 40.0%
GAAGAAAAGTAAGCCACGTA+AGG - chr4.1:6966614-6966633 MS.gene70102:intron 40.0%
GAGGTCTTGAAAAGGAAGTT+AGG - chr4.1:6966435-6966454 MS.gene70102:CDS 40.0%
GATCCGATATAATTGTGACC+TGG + chr4.1:6964417-6964436 None:intergenic 40.0%
GATGAAGTGCACACTCTAAT+TGG - chr4.1:6965389-6965408 MS.gene70102:intron 40.0%
GATTGGTACTAATCGAGCTA+AGG - chr4.1:6963744-6963763 MS.gene70102:CDS 40.0%
GGAAAATTGGATCCTGTTGT+GGG - chr4.1:6964885-6964904 MS.gene70102:intron 40.0%
GGAAGTTAGGCAGATAGTAA+AGG - chr4.1:6966448-6966467 MS.gene70102:CDS 40.0%
GTATAACCAACATATCCTGG+AGG + chr4.1:6967265-6967284 None:intergenic 40.0%
GTCGAGGTAGAGAAGATAAT+TGG - chr4.1:6963979-6963998 MS.gene70102:CDS 40.0%
TATCCCTGTTGACAAAGTCT+CGG - chr4.1:6966949-6966968 MS.gene70102:intron 40.0%
TCAAGCCTATTCAAGAACTC+TGG + chr4.1:6967601-6967620 None:intergenic 40.0%
TCATGTTGAAGACATCAGGA+TGG + chr4.1:6967363-6967382 None:intergenic 40.0%
TCGCAACCAAGAGTTTGAAA+AGG - chr4.1:6966487-6966506 MS.gene70102:CDS 40.0%
TCTCAGTGACAGAGAGATTT+AGG - chr4.1:6967725-6967744 MS.gene70102:CDS 40.0%
TGAGTGACACGTTCAATTTG+TGG + chr4.1:6964918-6964937 None:intergenic 40.0%
TGTATGGTTTCAGGAACAGT+TGG + chr4.1:6965822-6965841 None:intergenic 40.0%
TGTCCTTCTCATCATAGTCA+AGG + chr4.1:6967522-6967541 None:intergenic 40.0%
TTAGGCCAGAGTTCTTGAAT+AGG - chr4.1:6967593-6967612 MS.gene70102:CDS 40.0%
TTCAAATCCTAGAAGATGGG+AGG - chr4.1:6967386-6967405 MS.gene70102:intron 40.0%
TTCTTTCCCTCTATGGTTTC+GGG + chr4.1:6965050-6965069 None:intergenic 40.0%
TTGGACTTAAGAACCCTAAC+AGG - chr4.1:6967080-6967099 MS.gene70102:intron 40.0%
TTTCAGGCAACTCACTAAAC+TGG - chr4.1:6967633-6967652 MS.gene70102:CDS 40.0%
! ATCAAAGAGTACAACCGTGT+AGG + chr4.1:6967326-6967345 None:intergenic 40.0%
! GAACGTGTCACTCAAATCTT+GGG - chr4.1:6964924-6964943 MS.gene70102:intron 40.0%
! GATTTTATTCAGGGGGTAAG+GGG - chr4.1:6965111-6965130 MS.gene70102:intron 40.0%
! GGCGTGATTTATGTTTTGTC+CGG - chr4.1:6964286-6964305 MS.gene70102:CDS 40.0%
! TATGTTGGTTATACTGAGGG+TGG - chr4.1:6967271-6967290 MS.gene70102:intron 40.0%
! TCAAAGAGTACAACCGTGTA+GGG + chr4.1:6967325-6967344 None:intergenic 40.0%
! TGAACGTGTCACTCAAATCT+TGG - chr4.1:6964923-6964942 MS.gene70102:intron 40.0%
!! AAAAAGATCCAGCTTTGGAG+AGG - chr4.1:6965769-6965788 MS.gene70102:intron 40.0%
!! AGAAAAGAACTGCTGGTTCA+GGG + chr4.1:6966356-6966375 None:intergenic 40.0%
!! AGTAATTATGTTGGCTCAGG+AGG - chr4.1:6963831-6963850 MS.gene70102:CDS 40.0%
!! ATAGTGGATGCTGATTCTGA+TGG - chr4.1:6967880-6967899 MS.gene70102:CDS 40.0%
!! CTATTGGGTCTTATTGGTGA+AGG - chr4.1:6963898-6963917 MS.gene70102:CDS 40.0%
!! CTTTTGGGTCTTCTTAGAGA+GGG - chr4.1:6964447-6964466 MS.gene70102:CDS 40.0%
!!! CTAAGGTTTTGAAGTCCATG+GGG - chr4.1:6963935-6963954 MS.gene70102:CDS 40.0%
!!! GCTAAGGTTTTGAAGTCCAT+GGG - chr4.1:6963934-6963953 MS.gene70102:CDS 40.0%
AAGCAGTAGAAGCCATTAGC+AGG - chr4.1:6967038-6967057 MS.gene70102:CDS 45.0%
AAGGAGCAGCTAGATCAAGA+AGG - chr4.1:6963590-6963609 MS.gene70102:CDS 45.0%
AATTGGATCCTGTTGTGGGT+AGG - chr4.1:6964889-6964908 MS.gene70102:intron 45.0%
ACAAGGCTTTCACGTCATTC+AGG + chr4.1:6965234-6965253 None:intergenic 45.0%
ACCAACCTTCTTTCCCTCTA+TGG + chr4.1:6965057-6965076 None:intergenic 45.0%
ACCATAGAGGGAAAGAAGGT+TGG - chr4.1:6965053-6965072 MS.gene70102:intron 45.0%
ACCCAGACTGTCTAGTTACT+CGG - chr4.1:6963648-6963667 MS.gene70102:CDS 45.0%
ACTGGAGGTTAAGGAGATAG+CGG - chr4.1:6967651-6967670 MS.gene70102:CDS 45.0%
AGAGAGATTTAGGGAGAGAG+TGG - chr4.1:6967735-6967754 MS.gene70102:CDS 45.0%
AGAGGCAAGAGGTCTTGAAA+AGG - chr4.1:6966427-6966446 MS.gene70102:CDS 45.0%
AGCAGTAGAAGCCATTAGCA+GGG - chr4.1:6967039-6967058 MS.gene70102:CDS 45.0%
AGTCTTGGAACTCTCATTGG+AGG - chr4.1:6964056-6964075 MS.gene70102:CDS 45.0%
ATAATCCTAGTTATGGGGCC+AGG - chr4.1:6967770-6967789 MS.gene70102:CDS 45.0%
ATGGGAACAGGTTATTCGCA+TGG - chr4.1:6964650-6964669 MS.gene70102:CDS 45.0%
ATTGTGCTCAACGGTAGTAC+TGG - chr4.1:6967910-6967929 MS.gene70102:CDS 45.0%
CAACCGAGACTTTGTCAACA+GGG + chr4.1:6966955-6966974 None:intergenic 45.0%
CAAGCTCCGTTATACTGATG+AGG - chr4.1:6965881-6965900 MS.gene70102:intron 45.0%
CAATTTGACCAAGCTAGCAG+AGG - chr4.1:6964758-6964777 MS.gene70102:intron 45.0%
CACACAGTCTCCAAACTCAT+TGG - chr4.1:6967235-6967254 MS.gene70102:intron 45.0%
CATATTGTTGCCTCTTGGAC+TGG - chr4.1:6966926-6966945 MS.gene70102:intron 45.0%
CGAAACCATAGAGGGAAAGA+AGG - chr4.1:6965049-6965068 MS.gene70102:intron 45.0%
GAAAAGATGAAGCTGGCGAT+TGG + chr4.1:6967106-6967125 None:intergenic 45.0%
GAACAGGTTATTCGCATGGT+TGG - chr4.1:6964654-6964673 MS.gene70102:CDS 45.0%
GAGAGTCTTGGAACTCTCAT+TGG - chr4.1:6964053-6964072 MS.gene70102:CDS 45.0%
GATATGGGTCTACTTGTAGC+GGG - chr4.1:6965280-6965299 MS.gene70102:intron 45.0%
GATTAATGTCCCTGGTCTAG+TGG - chr4.1:6963540-6963559 MS.gene70102:CDS 45.0%
GGAAACGTGATTGTGCTCAA+CGG - chr4.1:6967901-6967920 MS.gene70102:CDS 45.0%
GGGAAAATTGGATCCTGTTG+TGG - chr4.1:6964884-6964903 MS.gene70102:intron 45.0%
GGGAGGCTAACAGATAGTAA+GGG - chr4.1:6967403-6967422 MS.gene70102:CDS 45.0%
GTCCTCCAAAAGTCGCATTA+TGG + chr4.1:6967809-6967828 None:intergenic 45.0%
GTCTCGCATAGTGCTTGTAT+GGG - chr4.1:6966139-6966158 MS.gene70102:intron 45.0%
GTCTGAATTGGCTAAGGCAT+TGG - chr4.1:6967147-6967166 MS.gene70102:intron 45.0%
GTTACTACTTCCAGAGCCAA+CGG + chr4.1:6964706-6964725 None:intergenic 45.0%
TCAACCGAGACTTTGTCAAC+AGG + chr4.1:6966956-6966975 None:intergenic 45.0%
TCCAACTAATATTCGCACCC+AGG - chr4.1:6964512-6964531 MS.gene70102:CDS 45.0%
TCTTGCTAGAGGTGAACTAC+AGG - chr4.1:6965463-6965482 MS.gene70102:intron 45.0%
TCTTTCCCTCTATGGTTTCG+GGG + chr4.1:6965049-6965068 None:intergenic 45.0%
TGAATAGGCTGGAGAGCTAA+GGG - chr4.1:6966784-6966803 MS.gene70102:CDS 45.0%
TGAGAGTTCCAAGACTCTCT+TGG + chr4.1:6964052-6964071 None:intergenic 45.0%
TGGAGGTGAACCAATGAGTT+TGG + chr4.1:6967248-6967267 None:intergenic 45.0%
TGGCTGAAAAGATGCTTGCT+AGG - chr4.1:6967833-6967852 MS.gene70102:CDS 45.0%
TGGGAGGCTAACAGATAGTA+AGG - chr4.1:6967402-6967421 MS.gene70102:CDS 45.0%
TGGTGAAGGAACTGGTATTG+CGG - chr4.1:6963912-6963931 MS.gene70102:CDS 45.0%
TGTCTCGCATAGTGCTTGTA+TGG - chr4.1:6966138-6966157 MS.gene70102:intron 45.0%
TTGAGCAAGACCTTCAGCAA+TGG + chr4.1:6965006-6965025 None:intergenic 45.0%
TTGCTGAAGGTCTTGCTCAA+CGG - chr4.1:6965006-6965025 MS.gene70102:CDS 45.0%
! ACGAGCCATAATGCGACTTT+TGG - chr4.1:6967801-6967820 MS.gene70102:CDS 45.0%
! AGAGCATCTGGCAATGAATC+TGG + chr4.1:6967940-6967959 None:intergenic 45.0%
! AGCCATAATGCGACTTTTGG+AGG - chr4.1:6967804-6967823 MS.gene70102:CDS 45.0%
! ATCGCCAGCTTCATCTTTTC+TGG - chr4.1:6967106-6967125 MS.gene70102:intron 45.0%
! ATGCCAACTTTGGAGGAGTA+TGG - chr4.1:6964732-6964751 MS.gene70102:intron 45.0%
! CATCAGTATAACGGAGCTTG+TGG + chr4.1:6965881-6965900 None:intergenic 45.0%
! CTCTGCTAGCTTGGTCAAAT+TGG + chr4.1:6964760-6964779 None:intergenic 45.0%
! GCATTGGCCTCATACTACTT+TGG - chr4.1:6967163-6967182 MS.gene70102:intron 45.0%
! GCTTGCTAGGGAGATTAAAG+AGG - chr4.1:6967846-6967865 MS.gene70102:CDS 45.0%
! GGCTGAAAAGATGCTTGCTA+GGG - chr4.1:6967834-6967853 MS.gene70102:CDS 45.0%
! TCTAAGGTGCTCACTCAGAT+TGG - chr4.1:6963727-6963746 MS.gene70102:CDS 45.0%
!! AAACTCATTGGTTCACCTCC+AGG - chr4.1:6967247-6967266 MS.gene70102:intron 45.0%
!! AATTATGTTGGCTCAGGAGG+AGG - chr4.1:6963834-6963853 MS.gene70102:CDS 45.0%
!! AGCCTTGTTCTGCATGATGT+AGG - chr4.1:6965246-6965265 MS.gene70102:intron 45.0%
!! CTTGCTCAACGGATTGCAAA+TGG - chr4.1:6965017-6965036 MS.gene70102:CDS 45.0%
!! GAGAAAAGAACTGCTGGTTC+AGG + chr4.1:6966357-6966376 None:intergenic 45.0%
!! GCTTTTGGGTCTTCTTAGAG+AGG - chr4.1:6964446-6964465 MS.gene70102:CDS 45.0%
!! GGATCTGAGCACTTGCTTTT+GGG - chr4.1:6964432-6964451 MS.gene70102:CDS 45.0%
!! GGTCTTATTGGTGAAGGAAC+TGG - chr4.1:6963904-6963923 MS.gene70102:CDS 45.0%
!! GTTATTCGCATGGTTGGTGA+GGG - chr4.1:6964660-6964679 MS.gene70102:CDS 45.0%
!! TTCATCTTTTCTGGCCCTAC+TGG - chr4.1:6967115-6967134 MS.gene70102:intron 45.0%
!!! GGCTAAGGTTTTGAAGTCCA+TGG - chr4.1:6963933-6963952 MS.gene70102:CDS 45.0%
!! ATATAATAAAAATACATAAA+AGG + chr4.1:6964561-6964580 None:intergenic 5.0%
AACAGGGATACCAGTCCAAG+AGG + chr4.1:6966939-6966958 None:intergenic 50.0%
AATCGAGCTAAGGGTGGTAG+AGG - chr4.1:6963754-6963773 MS.gene70102:CDS 50.0%
AGAGGGCGACTCTGTTATAG+TGG - chr4.1:6967864-6967883 MS.gene70102:CDS 50.0%
AGCAGTGTGATCGAGAAAGG+AGG - chr4.1:6967478-6967497 MS.gene70102:CDS 50.0%
AGCTGAAGGGGCAATTGATG+CGG - chr4.1:6965421-6965440 MS.gene70102:intron 50.0%
AGGAACTGGTATTGCGGCTA+AGG - chr4.1:6963918-6963937 MS.gene70102:CDS 50.0%
AGGGCCAGAAAAGATGAAGC+TGG + chr4.1:6967113-6967132 None:intergenic 50.0%
AGTCCGACTTCAACATGCAC+AGG - chr4.1:6966312-6966331 MS.gene70102:intron 50.0%
AGTTACCTCCTCTGCTAGCT+TGG + chr4.1:6964769-6964788 None:intergenic 50.0%
AGTTCACCTCTAGCAAGAGC+TGG + chr4.1:6965461-6965480 None:intergenic 50.0%
CAGGCAACTCACTAAACTGG+AGG - chr4.1:6967636-6967655 MS.gene70102:CDS 50.0%
CAGTTACCTGAAGAGGCAAG+AGG - chr4.1:6966416-6966435 MS.gene70102:CDS 50.0%
CCAGGTTCCCCAATAAGACA+AGG + chr4.1:6964969-6964988 None:intergenic 50.0%
CCCAGACTGTCTAGTTACTC+GGG - chr4.1:6963649-6963668 MS.gene70102:CDS 50.0%
CCCGAGTAACTAGACAGTCT+GGG + chr4.1:6963652-6963671 None:intergenic 50.0%
CCTAAAAGATGCACGTGTCG+AGG - chr4.1:6963963-6963982 MS.gene70102:CDS 50.0%
CGCATTATGGCTCGTCTTAG+AGG + chr4.1:6967796-6967815 None:intergenic 50.0%
CTGAATAGGCTGGAGAGCTA+AGG - chr4.1:6966783-6966802 MS.gene70102:CDS 50.0%
CTTATTGGGGAACCTGGTGT+CGG - chr4.1:6964972-6964991 MS.gene70102:intron 50.0%
GATGAACAAGGCAGAGAGTG+AGG - chr4.1:6966862-6966881 MS.gene70102:intron 50.0%
GATGTCCCCGAAACCATAGA+GGG - chr4.1:6965041-6965060 MS.gene70102:CDS 50.0%
GCCTGGGTGCGAATATTAGT+TGG + chr4.1:6964516-6964535 None:intergenic 50.0%
GCTCTGGCACTTTAACAGGT+TGG + chr4.1:6965800-6965819 None:intergenic 50.0%
GGAAAGACAGCCATTGCTGA+AGG - chr4.1:6964993-6965012 MS.gene70102:CDS 50.0%
GGAAGCAGTGTGATCGAGAA+AGG - chr4.1:6967475-6967494 MS.gene70102:CDS 50.0%
GGGGAAGTCTGAATTGGCTA+AGG - chr4.1:6967141-6967160 MS.gene70102:intron 50.0%
GGTACTAATCGAGCTAAGGG+TGG - chr4.1:6963748-6963767 MS.gene70102:CDS 50.0%
GGTCTTCTTAGAGAGGGTGA+AGG - chr4.1:6964453-6964472 MS.gene70102:CDS 50.0%
GGTTCACCTCCAGGATATGT+TGG - chr4.1:6967256-6967275 MS.gene70102:intron 50.0%
GTACTCCACTTGATGGGAAC+AGG - chr4.1:6964638-6964657 MS.gene70102:CDS 50.0%
GTCAACTGACTGAGGCAGTT+CGG - chr4.1:6967293-6967312 MS.gene70102:intron 50.0%
GTGCACACTCTAATTGGAGC+AGG - chr4.1:6965395-6965414 MS.gene70102:intron 50.0%
GTGCATGTTGAAGTCGGACT+CGG + chr4.1:6966312-6966331 None:intergenic 50.0%
GTGCCATACTCCTCCAAAGT+TGG + chr4.1:6964738-6964757 None:intergenic 50.0%
TAAGTCCAACACGAGCTCGA+CGG + chr4.1:6967069-6967088 None:intergenic 50.0%
TCAAGACCTCTTGCCTCTTC+AGG + chr4.1:6966425-6966444 None:intergenic 50.0%
TCCCGAGTAACTAGACAGTC+TGG + chr4.1:6963653-6963672 None:intergenic 50.0%
TCTTAGAGAGGGTGAAGGTG+TGG - chr4.1:6964458-6964477 MS.gene70102:CDS 50.0%
TGATGTCCCCGAAACCATAG+AGG - chr4.1:6965040-6965059 MS.gene70102:CDS 50.0%
TGCATGTTGAAGTCGGACTC+GGG + chr4.1:6966311-6966330 None:intergenic 50.0%
TGGTGTGGGGAAGTCTGAAT+TGG - chr4.1:6967135-6967154 MS.gene70102:intron 50.0%
TTGAAGCCAGCTCTTGCTAG+AGG - chr4.1:6965452-6965471 MS.gene70102:intron 50.0%
TTGGAGGAAGCTCGTCAACT+TGG - chr4.1:6964072-6964091 MS.gene70102:CDS 50.0%
TTTGACCAAGCTAGCAGAGG+AGG - chr4.1:6964761-6964780 MS.gene70102:intron 50.0%
! AATCAAGAGCTTGGTGACCG+AGG - chr4.1:6967555-6967574 MS.gene70102:CDS 50.0%
! CCTCGACACGTGCATCTTTT+AGG + chr4.1:6963966-6963985 None:intergenic 50.0%
! CCTTGTCTTATTGGGGAACC+TGG - chr4.1:6964966-6964985 MS.gene70102:intron 50.0%
! CGGATCTGAGCACTTGCTTT+TGG - chr4.1:6964431-6964450 MS.gene70102:CDS 50.0%
! CGGCTGGGACACAATTTTGT+TGG - chr4.1:6963862-6963881 MS.gene70102:CDS 50.0%
! CTGTTAGCCTCCCATCTTCT+AGG + chr4.1:6967396-6967415 None:intergenic 50.0%
! GGTTATTCGCATGGTTGGTG+AGG - chr4.1:6964659-6964678 MS.gene70102:CDS 50.0%
! GTAGCGGGAACTAAATACCG+TGG - chr4.1:6965295-6965314 MS.gene70102:intron 50.0%
! GTTTCAGGAACAGTTGGCTC+TGG + chr4.1:6965816-6965835 None:intergenic 50.0%
!! AGAACTGCTGGTTCAGGGAA+TGG + chr4.1:6966351-6966370 None:intergenic 50.0%
!! GTGAGGGTGCTGATAGTGTT+GGG - chr4.1:6964676-6964695 MS.gene70102:CDS 50.0%
!! GTTGGCTCTGGCACTTTAAC+AGG + chr4.1:6965804-6965823 None:intergenic 50.0%
!! TGAGGGTGCTGATAGTGTTG+GGG - chr4.1:6964677-6964696 MS.gene70102:intron 50.0%
!! TTTTCTGGCCCTACTGGTGT+GGG - chr4.1:6967121-6967140 MS.gene70102:intron 50.0%
AACAAGGCAGAGAGTGAGGC+AGG - chr4.1:6966866-6966885 MS.gene70102:intron 55.0%
AATGTCCCTGGTCTAGTGGC+TGG - chr4.1:6963544-6963563 MS.gene70102:CDS 55.0%
ATGGCTGTCTTTCCGACACC+AGG + chr4.1:6964987-6965006 None:intergenic 55.0%
ATTGGAGCAGGAGCAGCTGA+AGG - chr4.1:6965407-6965426 MS.gene70102:intron 55.0%
CAAGACTCTCTTGGCACGTG+GGG + chr4.1:6964043-6964062 None:intergenic 55.0%
CAGACTTCCCCACACCAGTA+GGG + chr4.1:6967132-6967151 None:intergenic 55.0%
CCAAGACTCTCTTGGCACGT+GGG + chr4.1:6964044-6964063 None:intergenic 55.0%
CTCTTGGCACGTGGGGTAAA+CGG + chr4.1:6964036-6964055 None:intergenic 55.0%
GAGAGTGAGGCAGGAGATGT+AGG - chr4.1:6966875-6966894 MS.gene70102:intron 55.0%
GCGCAGTCGATTAATGTCCC+TGG - chr4.1:6963532-6963551 MS.gene70102:CDS 55.0%
TATGGCTCGTCTTAGAGGCC+TGG + chr4.1:6967791-6967810 None:intergenic 55.0%
TCAGACTTCCCCACACCAGT+AGG + chr4.1:6967133-6967152 None:intergenic 55.0%
TCCAAGACTCTCTTGGCACG+TGG + chr4.1:6964045-6964064 None:intergenic 55.0%
TCGACGGATAGCCCTGCTAA+TGG + chr4.1:6967053-6967072 None:intergenic 55.0%
TGAGGGTGGTCAACTGACTG+AGG - chr4.1:6967285-6967304 MS.gene70102:intron 55.0%
TGGAATCGCCTCTCCAAAGC+TGG + chr4.1:6965780-6965799 None:intergenic 55.0%
TTCGACCAGCCACTAGACCA+GGG + chr4.1:6963552-6963571 None:intergenic 55.0%
TTGGAGCAGGAGCAGCTGAA+GGG - chr4.1:6965408-6965427 MS.gene70102:intron 55.0%
! GATAGTGTTGGGGCTACCGT+TGG - chr4.1:6964687-6964706 MS.gene70102:intron 55.0%
! TTTCTGGCCCTACTGGTGTG+GGG - chr4.1:6967122-6967141 MS.gene70102:intron 55.0%
!! AAGCTGGCGATTGGCCTGTT+AGG + chr4.1:6967097-6967116 None:intergenic 55.0%
!! ACTGCTGGTTCAGGGAATGG+TGG + chr4.1:6966348-6966367 None:intergenic 55.0%
!! AGCTGGCGATTGGCCTGTTA+GGG + chr4.1:6967096-6967115 None:intergenic 55.0%
!! CTTTTCTGGCCCTACTGGTG+TGG - chr4.1:6967120-6967139 MS.gene70102:intron 55.0%
!! GCGACTTTTGGAGGACAGCA+TGG - chr4.1:6967813-6967832 MS.gene70102:CDS 55.0%
!! GGTGAGGGTGCTGATAGTGT+TGG - chr4.1:6964675-6964694 MS.gene70102:CDS 55.0%
AGAGGCCTGGCCCCATAACT+AGG + chr4.1:6967778-6967797 None:intergenic 60.0%
AGGGAGAGAGTGGTCGACGA+AGG - chr4.1:6967745-6967764 MS.gene70102:CDS 60.0%
AGTTCGGCGTCGTCCCTACA+CGG - chr4.1:6967309-6967328 MS.gene70102:intron 60.0%
CCCACGTGCCAAGAGAGTCT+TGG - chr4.1:6964041-6964060 MS.gene70102:CDS 60.0%
CTTCGACCAGCCACTAGACC+AGG + chr4.1:6963553-6963572 None:intergenic 60.0%
GAGAAAGGAGGCCGTCGCAT+AGG - chr4.1:6967490-6967509 MS.gene70102:CDS 60.0%
GCTATCCGTCGAGCTCGTGT+TGG - chr4.1:6967061-6967080 MS.gene70102:intron 60.0%
TCTGGGTGCAGCAGTTCGTG+TGG + chr4.1:6963635-6963654 None:intergenic 60.0%
TGGAGCAGGAGCAGCTGAAG+GGG - chr4.1:6965409-6965428 MS.gene70102:intron 60.0%
TGTGGCTGCCTACCCACAAC+AGG + chr4.1:6964900-6964919 None:intergenic 60.0%
! CTGGTCTAGTGGCTGGTCGA+AGG - chr4.1:6963551-6963570 MS.gene70102:CDS 60.0%
!! TGTTGGCTCAGGAGGAGGCA+AGG - chr4.1:6963839-6963858 MS.gene70102:CDS 60.0%
TGGCTCAGGAGGAGGCAAGG+CGG - chr4.1:6963842-6963861 MS.gene70102:CDS 65.0%
!! GTTGGGGCTACCGTTGGCTC+TGG - chr4.1:6964693-6964712 MS.gene70102:intron 65.0%
CAGGAGGAGGCAAGGCGGCT+GGG - chr4.1:6963847-6963866 MS.gene70102:CDS 70.0%
TCAGGAGGAGGCAAGGCGGC+TGG - chr4.1:6963846-6963865 MS.gene70102:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 6963517 6967969 6963517 ID=MS.gene70102
chr4.1 mRNA 6963517 6967969 6963517 ID=MS.gene70102.t1;Parent=MS.gene70102
chr4.1 exon 6967393 6967969 6967393 ID=MS.gene70102.t1.exon1;Parent=MS.gene70102.t1
chr4.1 CDS 6967393 6967969 6967393 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6966953 6967068 6966953 ID=MS.gene70102.t1.exon2;Parent=MS.gene70102.t1
chr4.1 CDS 6966953 6967068 6966953 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6966704 6966826 6966704 ID=MS.gene70102.t1.exon3;Parent=MS.gene70102.t1
chr4.1 CDS 6966704 6966826 6966704 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6966416 6966601 6966416 ID=MS.gene70102.t1.exon4;Parent=MS.gene70102.t1
chr4.1 CDS 6966416 6966601 6966416 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6966173 6966218 6966173 ID=MS.gene70102.t1.exon5;Parent=MS.gene70102.t1
chr4.1 CDS 6966173 6966218 6966173 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6966002 6966069 6966002 ID=MS.gene70102.t1.exon6;Parent=MS.gene70102.t1
chr4.1 CDS 6966002 6966069 6966002 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6965543 6965760 6965543 ID=MS.gene70102.t1.exon7;Parent=MS.gene70102.t1
chr4.1 CDS 6965543 6965760 6965543 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6965153 6965228 6965153 ID=MS.gene70102.t1.exon8;Parent=MS.gene70102.t1
chr4.1 CDS 6965153 6965228 6965153 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6964978 6965067 6964978 ID=MS.gene70102.t1.exon9;Parent=MS.gene70102.t1
chr4.1 CDS 6964978 6965067 6964978 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
chr4.1 exon 6963517 6964695 6963517 ID=MS.gene70102.t1.exon10;Parent=MS.gene70102.t1
chr4.1 CDS 6963517 6964695 6963517 ID=cds.MS.gene70102.t1;Parent=MS.gene70102.t1
Gene Sequence

>MS.gene70102

ATGTCGAGGGTTTTGGCGCAGTCGATTAATGTCCCTGGTCTAGTGGCTGGTCGAAGGCATGTCAATAACAACAAAGGAGCAGCTAGATCAAGAAGGTCTGTCAGAATGATGTTTACCACACGAACTGCTGCACCCAGACTGTCTAGTTACTCGGGATTACGTACTTTGAATTCTTTGGATTCAATGTTTAGACCTGGCCAAGATTTTCATTCTAAGGTGCTCACTCAGATTGGTACTAATCGAGCTAAGGGTGGTAGAGGTAGCAGATGCGTTACTAAAGCCATGTTTGAGCGTTTTACAGAGAAAGCTATCAAAGTAATTATGTTGGCTCAGGAGGAGGCAAGGCGGCTGGGACACAATTTTGTTGGAACTGAACAGATTCTATTGGGTCTTATTGGTGAAGGAACTGGTATTGCGGCTAAGGTTTTGAAGTCCATGGGGATTAACCTAAAAGATGCACGTGTCGAGGTAGAGAAGATAATTGGAAGGGGAAGTGGTTTTGTCGCTGTTGAGATTCCGTTTACCCCACGTGCCAAGAGAGTCTTGGAACTCTCATTGGAGGAAGCTCGTCAACTTGGTAAACGATAGCATACTTTTATAATGTCGTTTTGCATATCTAATCAATTACTTTGTTTACAAAAAATGTGTTCACGACTTATTATTTGTATGATATATTCCAAACATGACTTGATTTTTGCTTTGAGTGATCTGTCGGTTGACTAATTTGAATTATTTTCATTCAAAGTGAGTTGAAATTTATCCATGAATTGGCGTGATTTATGTTTTGTCCGGCCTTTCTGTTCTTTTGTTTATTTTATTTGGAGTGTTTAAAAATTAGTATTCACGTGCAATACTTTGCTTGTGCTTGCTGAAAGTTTGCCTTACATTTTGCAATTTCCAGGTCACAATTATATCGGATCTGAGCACTTGCTTTTGGGTCTTCTTAGAGAGGGTGAAGGTGTGGCAGCACGTGTTCTTGAAAATTTGGGTGCTGATCCAACTAATATTCGCACCCAGGCAAGTATTATGTCATCATTTATTCCTTTTATGTATTTTTATTATATAAGAACATGTTTTCATTTCACTTTTTATCTGAATTTATGTTTTTGTGTGTTAATCTTGTACTCCACTTGATGGGAACAGGTTATTCGCATGGTTGGTGAGGGTGCTGATAGTGTTGGGGCTACCGTTGGCTCTGGAAGTAGTAACAATAAGATGCCAACTTTGGAGGAGTATGGCACCAATTTGACCAAGCTAGCAGAGGAGGTAACTTACAATTCCTAGTTTTCTTCATGACAGATGGTAGATAATGTCTCAGTCTGTGTTGATGCTTACCAATTTTTCTCTTTCGTGATGTCAAAATCACAGGGAAAATTGGATCCTGTTGTGGGTAGGCAGCCACAAATTGAACGTGTCACTCAAATCTTGGGTCGTCGTACCAAAAATAATCCTTGTCTTATTGGGGAACCTGGTGTCGGAAAGACAGCCATTGCTGAAGGTCTTGCTCAACGGATTGCAAATGGTGATGTCCCCGAAACCATAGAGGGAAAGAAGGTTGGTGTTTGTTTCTATCTCTAGCCCATAAATTGTTTTTGATTTTATTCAGGGGGTAAGGGGTTTGCTCTTTCATTTTCAGCACCTTGAACATGTTTAACTTGCTCAATCTTGATCTGATTATAATTCTTAGATGTGGAATTTTAGTACTTTCGGGTGTCCTGAATGACGTGAAAGCCTTGTTCTGCATGATGTAGGTTATAACCCTAGATATGGGTCTACTTGTAGCGGGAACTAAATACCGTGGAGAATTTGAAGAAAGATTGAAAAAAACTAATGGAGGAAATCAAACAAAGTGATGAAATAATACTTTTCATTGATGAAGTGCACACTCTAATTGGAGCAGGAGCAGCTGAAGGGGCAATTGATGCGGCAAACATATTGAAGCCAGCTCTTGCTAGAGGTGAACTACAGGTAATGTTTTCTTTTGGCATCTCAAAAATGGATACGCTGCACTTTTGACTTGCAGATCAATGAAAATATGTATGCAGAAGTTTCAATAATAAGCTTTTGATTACTTCTATCTATAAAAAAGTGTACACATTTTCACAGTTCATTTTTAATCAATAGTATTAAAAAATTTAAATTCTTAATGATCATTTTGGATTGTCTATGAAATGTAAAGACTGAAGGCATAATTAAAATACTTATGCAGTGTATAGGAGCCACAACTCTAGATGAATATAGGAAGCACATTGAAAAAGATCCAGCTTTGGAGAGGCGATTCCAACCTGTTAAAGTGCCAGAGCCAACTGTTCCTGAAACCATACAAATACTGAAAGGACTTAGAGAGCGCTATGAGATTCACCACAAGCTCCGTTATACTGATGAGGCTCTTGTAGCTGCTGCAGAGCTGTCGCATCAATATATTAGGTTTGTCATAATTTATATTTATGCACATTCTCTGCCCGTTTTCAATTTTAATTTATGATGTGGAAAAGAGAATTTTTTTATAGTTCTGGTATTACATGTTTAAATGGGAATTTTTAAACCGAAGTTAATCATCTGGAATTTAGTATTATGCCTTTGAATTGTTTTACAACATTATTTTGGAACTCTCACGTAGTTGTCTCGCATAGTGCTTGTATGGGAATGAATCAAACTGCACCTTCTTCTATCTTGTTATCTTCTACTTGCTGTTTATCTCAAGTGTTTTCTCGCTCATAAAATAATTATGATTTTTGCAGTGATCGATTTTTGCCTGACAAAGCTATAGATTTGATTGATGAAGCTGGTTCCCGAGTCCGACTTCAACATGCACAGGTATTGTTCATCCACCATTCCCTGAACCAGCAGTTCTTTTCTCGTCTATTATTGAGCTAATTGTGTCAGATTTACATACTTGCAGTTACCTGAAGAGGCAAGAGGTCTTGAAAAGGAAGTTAGGCAGATAGTAAAGGAGAAAGATGAAGCTGTTCGCAACCAAGAGTTTGAAAAGGTAATGCTTTAATTTAAAACTTAACTTGTAAACTTTAACATAACCCCACATTTTTAGGATACTCAACCACCTTTTTTCCAGTGAGATTACATTATATTTTTCAAAGAAGAAAAGTAAGCCACGTAAGGCTGTTTTATCTTTCCTAAAGTTCTATAGCGGCTTTGTTCTCTAGTTTTTGTTTGAAGACATTGTAGTGGTTTGTTCCTTCAATTATATATATCCAAATTCCTTTACATTCTGGGTAATAAATAGTGGGCTGATGATACCTTAATTTCTGAATAGGCTGGAGAGCTAAGGGATAAAGAAATGGATCTCAAGACTCAGATATCAGCACTTATAGAAAAAAACAAGGAGATGAACAAGGCAGAGAGTGAGGCAGGAGATGTAGGTGCACTTGTGACTGAAGTTGACATACAACATATTGTTGCCTCTTGGACTGGTATCCCTGTTGACAAAGTCTCGGTTGACGAATCTGATCGTCTTCTCAAGATGGAAGACACATTACACAAACGCATTATTGGTCAGCATGAAGCAGTAGAAGCCATTAGCAGGGCTATCCGTCGAGCTCGTGTTGGACTTAAGAACCCTAACAGGCCAATCGCCAGCTTCATCTTTTCTGGCCCTACTGGTGTGGGGAAGTCTGAATTGGCTAAGGCATTGGCCTCATACTACTTTGGATCTGAAGAAGCCATGATTCGTCTTGATATGAGTGAATTCATGGAAAGGCACACAGTCTCCAAACTCATTGGTTCACCTCCAGGATATGTTGGTTATACTGAGGGTGGTCAACTGACTGAGGCAGTTCGGCGTCGTCCCTACACGGTTGTACTCTTTGATGAGATTGAGAAAGCCCATCCTGATGTCTTCAACATGATGCTTCAAATCCTAGAAGATGGGAGGCTAACAGATAGTAAGGGAAGAACTGTGGACTTCAAGAACACACTTCTTATAATGACATCAAATGTTGGAAGCAGTGTGATCGAGAAAGGAGGCCGTCGCATAGGATTTGACCTTGACTATGATGAGAAGGACAGCAGTTATAACAGAATCAAGAGCTTGGTGACCGAGGAGCTGAAACAATACTTTAGGCCAGAGTTCTTGAATAGGCTTGATGAAATGATTGTTTTCAGGCAACTCACTAAACTGGAGGTTAAGGAGATAGCGGATATAATGTTGAAGGAGGTGTTCGAGAGACTGAAAACCAAAGAGATTGAACTCTCAGTGACAGAGAGATTTAGGGAGAGAGTGGTCGACGAAGGTTATAATCCTAGTTATGGGGCCAGGCCTCTAAGACGAGCCATAATGCGACTTTTGGAGGACAGCATGGCTGAAAAGATGCTTGCTAGGGAGATTAAAGAGGGCGACTCTGTTATAGTGGATGCTGATTCTGATGGAAACGTGATTGTGCTCAACGGTAGTACTGGTGCTCCAGATTCATTGCCAGATGCTCTTCCTGTGTAA

Protein sequence

>MS.gene70102.t1

MSRVLAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTAAPRLSSYSGLRTLNSLDSMFRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTGAPDSLPDALPV