Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73547.t1 | QCE05440.1 | 55.3 | 499 | 107 | 5 | 1 | 497 | 1 | 385 | 1.90E-144 | 522.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73547.t1 | O04846 | 43.0 | 263 | 148 | 2 | 1 | 263 | 5 | 265 | 2.4e-63 | 244.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73547.t1 | A0A4D6MVC9 | 55.3 | 499 | 107 | 5 | 1 | 497 | 1 | 385 | 1.4e-144 | 522.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene73547 | 0.805499 | 1.30E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene73547 | 0.806906 | 6.55E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene73547 | 0.838978 | 2.09E-57 | -1.69E-46 |
| MS.gene049232 | MS.gene73547 | 0.860366 | 2.17E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene73547 | 0.813402 | 2.61E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene73547 | 0.817005 | 4.13E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene73547 | 0.842815 | 2.05E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene73547 | 0.838063 | 3.59E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene73547 | 0.806086 | 9.76E-50 | -1.69E-46 |
| MS.gene049656 | MS.gene73547 | 0.817373 | 3.41E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene73547 | 0.814064 | 1.86E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene73547 | 0.817276 | 3.59E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene73547 | 0.812433 | 4.25E-51 | -1.69E-46 |
| MS.gene050499 | MS.gene73547 | 0.831505 | 1.61E-55 | -1.69E-46 |
| MS.gene050502 | MS.gene73547 | 0.850835 | 1.31E-60 | -1.69E-46 |
| MS.gene050504 | MS.gene73547 | 0.80473 | 1.88E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene73547 | 0.805664 | 1.20E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene73547 | 0.800165 | 1.64E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene73547 | 0.818415 | 1.98E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene73547 | 0.841318 | 5.11E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene73547 | 0.852412 | 4.70E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene73547 | 0.813599 | 2.36E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene73547 | 0.831883 | 1.30E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene73547 | 0.832466 | 9.30E-56 | -1.69E-46 |
| MS.gene050950 | MS.gene73547 | 0.842388 | 2.67E-58 | -1.69E-46 |
| MS.gene05105 | MS.gene73547 | 0.805189 | 1.50E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene73547 | 0.848414 | 6.22E-60 | -1.69E-46 |
| MS.gene051551 | MS.gene73547 | 0.820482 | 6.70E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene73547 | 0.803758 | 2.99E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene73547 | 0.84135 | 5.01E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene73547 | 0.814722 | 1.33E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene73547 | 0.840989 | 6.23E-58 | -1.69E-46 |
| MS.gene052346 | MS.gene73547 | 0.826976 | 2.02E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene73547 | 0.82337 | 1.44E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene73547 | 0.829288 | 5.60E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene73547 | 0.835933 | 1.26E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene73547 | 0.825853 | 3.74E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene73547 | 0.845264 | 4.53E-59 | -1.69E-46 |
| MS.gene052505 | MS.gene73547 | 0.806329 | 8.67E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene73547 | 0.837688 | 4.48E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene73547 | 0.832646 | 8.40E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene73547 | 0.832749 | 7.92E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene73547 | 0.813442 | 2.55E-51 | -1.69E-46 |
| MS.gene053018 | MS.gene73547 | 0.807383 | 5.19E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene73547 | 0.824532 | 7.67E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene73547 | 0.801432 | 9.03E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene73547 | 0.844746 | 6.24E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene73547 | 0.840508 | 8.34E-58 | -1.69E-46 |
| MS.gene053436 | MS.gene73547 | 0.844185 | 8.84E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene73547 | 0.893722 | 4.82E-75 | -1.69E-46 |
| MS.gene053626 | MS.gene73547 | 0.825888 | 3.67E-54 | -1.69E-46 |
| MS.gene053633 | MS.gene73547 | 0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene73547 | 0.833174 | 6.21E-56 | -1.69E-46 |
| MS.gene054003 | MS.gene73547 | 0.823114 | 1.65E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene73547 | 0.80418 | 2.44E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene73547 | 0.824354 | 8.45E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene73547 | 0.815496 | 8.98E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene73547 | 0.806283 | 8.87E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene73547 | 0.854418 | 1.25E-61 | -1.69E-46 |
| MS.gene05492 | MS.gene73547 | 0.820787 | 5.70E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene73547 | 0.803374 | 3.59E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene73547 | 0.807425 | 5.09E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene73547 | 0.809283 | 2.04E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene73547 | 0.815076 | 1.11E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene73547 | 0.816084 | 6.64E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene73547 | 0.824213 | 9.12E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene73547 | 0.817656 | 2.95E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene73547 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene73547 | 0.872347 | 3.41E-67 | -1.69E-46 |
| MS.gene05589 | MS.gene73547 | 0.820023 | 8.54E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene73547 | 0.819863 | 9.29E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene73547 | 0.821147 | 4.71E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene73547 | 0.810721 | 1.00E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene73547 | 0.808346 | 3.24E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene73547 | 0.894792 | 1.77E-75 | -1.69E-46 |
| MS.gene056374 | MS.gene73547 | 0.804467 | 2.13E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene73547 | 0.842314 | 2.79E-58 | -1.69E-46 |
| MS.gene056446 | MS.gene73547 | 0.820886 | 5.41E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene73547 | 0.85625 | 3.65E-62 | -1.69E-46 |
| MS.gene056504 | MS.gene73547 | 0.845109 | 4.98E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene73547 | 0.8193 | 1.25E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene73547 | 0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene73547 | 0.823848 | 1.11E-53 | -1.69E-46 |
| MS.gene056878 | MS.gene73547 | 0.836478 | 9.14E-57 | -1.69E-46 |
| MS.gene056946 | MS.gene73547 | 0.803573 | 3.27E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene73547 | 0.824173 | 9.32E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene73547 | 0.820964 | 5.19E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene73547 | 0.815901 | 7.29E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene73547 | 0.812543 | 4.02E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene73547 | 0.842147 | 3.09E-58 | -1.69E-46 |
| MS.gene05787 | MS.gene73547 | 0.807719 | 4.40E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene73547 | 0.810206 | 1.29E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene73547 | 0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene73547 | 0.821766 | 3.39E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene73547 | 0.82852 | 8.59E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene73547 | 0.820491 | 6.67E-53 | -1.69E-46 |
| MS.gene05883 | MS.gene73547 | 0.805055 | 1.61E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene73547 | 0.810055 | 1.39E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene73547 | 0.810787 | 9.69E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene73547 | 0.831126 | 1.99E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene73547 | 0.804394 | 2.21E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene73547 | 0.85387 | 1.79E-61 | -1.69E-46 |
| MS.gene059368 | MS.gene73547 | 0.839841 | 1.24E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene73547 | 0.827767 | 1.30E-54 | -1.69E-46 |
| MS.gene059517 | MS.gene73547 | 0.841563 | 4.40E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene73547 | 0.820066 | 8.35E-53 | -1.69E-46 |
| MS.gene059680 | MS.gene73547 | 0.829284 | 5.61E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene73547 | 0.821208 | 4.56E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene73547 | 0.810603 | 1.06E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene73547 | 0.831317 | 1.79E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene73547 | 0.815293 | 9.96E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene73547 | 0.881591 | 2.11E-70 | -1.69E-46 |
| MS.gene060703 | MS.gene73547 | 0.823396 | 1.42E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene73547 | 0.809924 | 1.49E-50 | -1.69E-46 |
| MS.gene060778 | MS.gene73547 | 0.817904 | 2.59E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene73547 | 0.835751 | 1.40E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene73547 | 0.821771 | 3.38E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene73547 | 0.838838 | 2.27E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene73547 | 0.867922 | 9.57E-66 | -1.69E-46 |
| MS.gene06097 | MS.gene73547 | 0.844986 | 5.38E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene73547 | 0.82103 | 5.01E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73547.t1 | MTR_1g059940 | 94.677 | 263 | 14 | 0 | 1 | 263 | 1 | 263 | 0.0 | 518 |
| MS.gene73547.t1 | MTR_1g059940 | 84.615 | 234 | 36 | 0 | 263 | 496 | 30 | 263 | 6.82e-146 | 419 |
| MS.gene73547.t1 | MTR_1g059960 | 85.551 | 263 | 38 | 0 | 1 | 263 | 1 | 263 | 7.81e-168 | 475 |
| MS.gene73547.t1 | MTR_1g059960 | 96.154 | 234 | 9 | 0 | 263 | 496 | 30 | 263 | 2.31e-166 | 471 |
| MS.gene73547.t1 | MTR_1g059960 | 96.154 | 234 | 9 | 0 | 263 | 496 | 9 | 242 | 3.65e-166 | 469 |
| MS.gene73547.t1 | MTR_1g059960 | 85.833 | 240 | 34 | 0 | 24 | 263 | 3 | 242 | 1.07e-153 | 438 |
| MS.gene73547.t1 | MTR_1g059900 | 92.386 | 197 | 15 | 0 | 67 | 263 | 1 | 197 | 2.28e-131 | 379 |
| MS.gene73547.t1 | MTR_1g059900 | 85.787 | 197 | 28 | 0 | 300 | 496 | 1 | 197 | 2.68e-122 | 356 |
| MS.gene73547.t1 | MTR_1g062880 | 40.476 | 252 | 138 | 5 | 24 | 270 | 35 | 279 | 8.38e-59 | 196 |
| MS.gene73547.t1 | MTR_1g062880 | 41.810 | 232 | 126 | 3 | 268 | 496 | 48 | 273 | 4.50e-57 | 191 |
| MS.gene73547.t1 | MTR_7g102960 | 44.017 | 234 | 119 | 5 | 268 | 496 | 42 | 268 | 1.09e-58 | 196 |
| MS.gene73547.t1 | MTR_7g102960 | 39.326 | 267 | 145 | 7 | 7 | 263 | 9 | 268 | 7.70e-56 | 188 |
| MS.gene73547.t1 | MTR_0219s0070 | 40.000 | 275 | 152 | 8 | 2 | 269 | 6 | 274 | 1.13e-58 | 195 |
| MS.gene73547.t1 | MTR_0219s0070 | 42.194 | 237 | 130 | 5 | 265 | 500 | 42 | 272 | 2.13e-57 | 192 |
| MS.gene73547.t1 | MTR_1g062860 | 36.090 | 266 | 159 | 4 | 1 | 263 | 16 | 273 | 2.40e-55 | 187 |
| MS.gene73547.t1 | MTR_1g062860 | 37.447 | 235 | 139 | 3 | 268 | 499 | 47 | 276 | 1.66e-53 | 182 |
| MS.gene73547.t1 | MTR_7g090950 | 40.426 | 235 | 126 | 5 | 268 | 501 | 42 | 263 | 3.15e-51 | 176 |
| MS.gene73547.t1 | MTR_7g090950 | 36.364 | 264 | 148 | 5 | 10 | 263 | 8 | 261 | 5.68e-47 | 164 |
| MS.gene73547.t1 | MTR_0219s0130 | 50.820 | 61 | 30 | 0 | 435 | 495 | 3 | 63 | 6.69e-17 | 75.5 |
| MS.gene73547.t1 | MTR_0219s0130 | 49.180 | 61 | 31 | 0 | 202 | 262 | 3 | 63 | 1.33e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73547.t1 | AT3G52720 | 42.966 | 263 | 148 | 2 | 1 | 263 | 5 | 265 | 1.54e-78 | 248 |
| MS.gene73547.t1 | AT3G52720 | 46.154 | 234 | 125 | 1 | 263 | 496 | 33 | 265 | 1.48e-77 | 245 |
| MS.gene73547.t1 | AT3G52720 | 42.966 | 263 | 148 | 2 | 1 | 263 | 5 | 265 | 1.54e-78 | 248 |
| MS.gene73547.t1 | AT3G52720 | 46.154 | 234 | 125 | 1 | 263 | 496 | 33 | 265 | 1.48e-77 | 245 |
| MS.gene73547.t1 | AT3G52720 | 42.966 | 263 | 148 | 2 | 1 | 263 | 5 | 265 | 1.54e-78 | 248 |
| MS.gene73547.t1 | AT3G52720 | 46.154 | 234 | 125 | 1 | 263 | 496 | 33 | 265 | 1.48e-77 | 245 |
| MS.gene73547.t1 | AT3G52720 | 41.150 | 226 | 131 | 2 | 1 | 226 | 5 | 228 | 9.49e-60 | 197 |
| MS.gene73547.t1 | AT3G52720 | 44.162 | 197 | 109 | 1 | 263 | 459 | 33 | 228 | 1.48e-58 | 194 |
| MS.gene73547.t1 | AT2G28210 | 40.693 | 231 | 130 | 3 | 267 | 496 | 47 | 271 | 2.08e-57 | 192 |
| MS.gene73547.t1 | AT2G28210 | 36.940 | 268 | 154 | 4 | 5 | 263 | 10 | 271 | 1.72e-56 | 190 |
| MS.gene73547.t1 | AT1G08080 | 40.611 | 229 | 130 | 2 | 268 | 496 | 49 | 271 | 2.90e-57 | 192 |
| MS.gene73547.t1 | AT1G08080 | 39.241 | 237 | 138 | 2 | 27 | 263 | 41 | 271 | 3.27e-55 | 186 |
| MS.gene73547.t1 | AT4G20990 | 38.559 | 236 | 132 | 5 | 268 | 503 | 45 | 267 | 2.06e-52 | 179 |
| MS.gene73547.t1 | AT4G20990 | 34.848 | 264 | 158 | 6 | 3 | 263 | 11 | 263 | 1.46e-47 | 166 |
| MS.gene73547.t1 | AT1G08065 | 36.090 | 266 | 156 | 5 | 7 | 264 | 10 | 269 | 2.43e-50 | 174 |
| MS.gene73547.t1 | AT1G08065 | 38.034 | 234 | 137 | 3 | 265 | 496 | 41 | 268 | 2.11e-48 | 169 |
| MS.gene73547.t1 | AT5G04180 | 36.863 | 255 | 150 | 4 | 9 | 258 | 5 | 253 | 8.28e-50 | 172 |
| MS.gene73547.t1 | AT5G04180 | 40.444 | 225 | 125 | 4 | 269 | 491 | 36 | 253 | 4.74e-49 | 170 |
| MS.gene73547.t1 | AT4G21000 | 37.824 | 193 | 110 | 4 | 267 | 459 | 45 | 227 | 1.23e-39 | 144 |
| MS.gene73547.t1 | AT4G21000 | 37.824 | 193 | 110 | 4 | 34 | 226 | 45 | 227 | 1.05e-36 | 137 |
| MS.gene73547.t1 | AT5G56330 | 34.016 | 244 | 112 | 5 | 24 | 263 | 136 | 334 | 2.78e-34 | 132 |
| MS.gene73547.t1 | AT5G56330 | 32.479 | 234 | 111 | 4 | 265 | 496 | 146 | 334 | 3.16e-31 | 124 |
| MS.gene73547.t1 | AT5G56330 | 41.290 | 155 | 86 | 3 | 24 | 174 | 136 | 289 | 8.34e-31 | 122 |
| MS.gene73547.t1 | AT5G56330 | 38.994 | 159 | 90 | 3 | 265 | 417 | 146 | 303 | 7.11e-28 | 114 |
| MS.gene73547.t1 | AT2G28210 | 44.792 | 96 | 52 | 1 | 267 | 361 | 47 | 142 | 1.26e-22 | 94.7 |
| MS.gene73547.t1 | AT2G28210 | 36.090 | 133 | 76 | 2 | 5 | 128 | 10 | 142 | 2.61e-22 | 94.0 |
Find 128 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTAAGGGTTTCAATTCT+TGG | 0.170815 | 1.4:+48970912 | None:intergenic |
| AAACGTGCCAAGGGCAATTT+TGG | 0.183202 | 1.4:+48969290 | None:intergenic |
| TATTGCAGCCCTCTACAATT+TGG | 0.195816 | 1.4:-48969606 | MS.gene73547:CDS |
| GTGGGAGATATTAATATAAA+TGG | 0.232737 | 1.4:-48970538 | MS.gene73547:CDS |
| GTGGGAGATATTAATATAAA+TGG | 0.232737 | 1.4:-48974453 | MS.gene73547:CDS |
| TAGAAGTTCAAGTTGTTTCT+TGG | 0.257686 | 1.4:+48971882 | None:intergenic |
| TTAACCACCAATACAGTATT+GGG | 0.277671 | 1.4:-48974835 | MS.gene73547:CDS |
| AGGATGGTAGTTTCTGTCTA+AGG | 0.282486 | 1.4:+48970898 | None:intergenic |
| AACTCTACCTTGGAGATTAG+AGG | 0.309203 | 1.4:+48972407 | None:intergenic |
| CCCCATTTCACAGGACCATT+TGG | 0.310757 | 1.4:+48974995 | None:intergenic |
| AACTTTACCTTGGAGATTAG+AGG | 0.311376 | 1.4:+48969572 | None:intergenic |
| AGGAAGGTAGTTTCTGTCTA+AGG | 0.316157 | 1.4:+48974874 | None:intergenic |
| TTAACAAGTGTAGCATTTGT+AGG | 0.319349 | 1.4:+48970878 | None:intergenic |
| AATCCTTTCCATAGCTGCTT+TGG | 0.324221 | 1.4:-48975174 | MS.gene73547:CDS |
| CCCCACTTCTCAGGACCATT+TGG | 0.327367 | 1.4:+48971019 | None:intergenic |
| TTAACAACCAATTCAACATT+GGG | 0.341353 | 1.4:-48970859 | MS.gene73547:CDS |
| ATGTAGAGGAAATAAATAAA+AGG | 0.341861 | 1.4:-48969266 | MS.gene73547:CDS |
| TACATACCCCAATGTTGAAT+TGG | 0.343928 | 1.4:+48970852 | None:intergenic |
| CAACATATCTATAATATCTA+TGG | 0.348697 | 1.4:+48969241 | None:intergenic |
| ATTCATTGAAACAACTTCAT+TGG | 0.362363 | 1.4:-48970507 | MS.gene73547:CDS |
| ATTCATTGAAACAACTTCAT+TGG | 0.362363 | 1.4:-48974422 | MS.gene73547:CDS |
| ATTGCAGCCCTCTACAATTT+GGG | 0.374926 | 1.4:-48969605 | MS.gene73547:CDS |
| TCATTTGCAGCATGCTCAAA+TGG | 0.379451 | 1.4:-48974959 | MS.gene73547:CDS |
| CATGCAAAGAAGGTGTCATT+TGG | 0.384098 | 1.4:-48969200 | MS.gene73547:CDS |
| CATGCAAAGAAGGTGTCATT+TGG | 0.384098 | 1.4:-48972098 | MS.gene73547:CDS |
| TCGTTTGCAGCATGCTCAAA+TGG | 0.388881 | 1.4:-48970983 | MS.gene73547:CDS |
| GGCATGCTCCTGCAGAGCAC+CGG | 0.395484 | 1.4:-48970486 | MS.gene73547:CDS |
| CCATGAGCCCGGTGCTCTGC+AGG | 0.396230 | 1.4:+48970478 | None:intergenic |
| CTCAGGGTTCCCCACTTCTC+AGG | 0.400725 | 1.4:+48971010 | None:intergenic |
| ATTGCCTGCACGGTTCTTGT+TGG | 0.401804 | 1.4:+48972218 | None:intergenic |
| TTTAGTTATATTGGACCAAA+TGG | 0.408021 | 1.4:-48971034 | MS.gene73547:intron |
| GACCAAATGGTCCTGTGAAA+TGG | 0.408573 | 1.4:-48974997 | MS.gene73547:CDS |
| ACCTTGGAGATTAGAGGATC+AGG | 0.410512 | 1.4:+48969578 | None:intergenic |
| GGCATGCACCTGCAGAGCAC+AGG | 0.420992 | 1.4:-48974401 | MS.gene73547:CDS |
| GGTGTCATTTGGAACGTCAT+TGG | 0.427256 | 1.4:-48972087 | MS.gene73547:CDS |
| GTTAACCACCAATACAGTAT+TGG | 0.427378 | 1.4:-48974836 | MS.gene73547:CDS |
| CCATGAGCCCTGTGCTCTGC+AGG | 0.431436 | 1.4:+48974393 | None:intergenic |
| TTAACAAGTGAGGCATTTGT+AGG | 0.434746 | 1.4:+48974854 | None:intergenic |
| CCTGCAGAGCACCGGGCTCA+TGG | 0.434839 | 1.4:-48970478 | MS.gene73547:CDS |
| ACCAAATGGTCCTGTGAAAT+GGG | 0.434988 | 1.4:-48974996 | MS.gene73547:CDS |
| ATTGCCCACACGATTCTCAT+TGG | 0.437600 | 1.4:+48969320 | None:intergenic |
| GCAGGTTAGGACACTCTCTA+AGG | 0.441593 | 1.4:-48968986 | MS.gene73547:intron |
| GGTGTCATTTGGAACATCAT+TGG | 0.445336 | 1.4:-48969189 | MS.gene73547:CDS |
| ACCTTGGAGATTAGAGGATC+AGG | 0.451234 | 1.4:+48972413 | None:intergenic |
| GGATGGTAGTTTCTGTCTAA+GGG | 0.452303 | 1.4:+48970899 | None:intergenic |
| GTTAACAACCAATTCAACAT+TGG | 0.453599 | 1.4:-48970860 | MS.gene73547:CDS |
| TGAACTTCTAAAGGCACCAT+TGG | 0.460853 | 1.4:-48971869 | MS.gene73547:CDS |
| TATCTTCTGTGAGGTGAACT+AGG | 0.462726 | 1.4:+48969645 | None:intergenic |
| TACATACCCCAATACTGTAT+TGG | 0.463982 | 1.4:+48974828 | None:intergenic |
| TTTAGCTATACTGGACCAAA+TGG | 0.478961 | 1.4:-48975010 | MS.gene73547:CDS |
| AAAACTTCTAAAGGCACCAC+TGG | 0.479462 | 1.4:-48968956 | MS.gene73547:CDS |
| GCATGCTCCTGCAGAGCACC+GGG | 0.482296 | 1.4:-48970485 | MS.gene73547:CDS |
| TCATTTATTACAAGTTCCAC+TGG | 0.485353 | 1.4:+48970947 | None:intergenic |
| CATTTGCAGCATGCTCAAAT+GGG | 0.488791 | 1.4:-48974958 | MS.gene73547:CDS |
| AAAGATGCTAACATTGCTCT+TGG | 0.489406 | 1.4:-48972195 | MS.gene73547:CDS |
| CCTTGGCACGTTTGATGTAG+AGG | 0.490692 | 1.4:-48969280 | MS.gene73547:CDS |
| GAAACAACTTGAACTTCTAA+AGG | 0.491675 | 1.4:-48971878 | MS.gene73547:CDS |
| CAAATGACACCTTCTTTGCA+TGG | 0.493029 | 1.4:+48969201 | None:intergenic |
| CAAATGACACCTTCTTTGCA+TGG | 0.493029 | 1.4:+48972099 | None:intergenic |
| GCATAGAGCCAAAGCAGCTA+TGG | 0.493534 | 1.4:+48975166 | None:intergenic |
| TATAGATATTATAGATATGT+TGG | 0.493778 | 1.4:-48972138 | MS.gene73547:CDS |
| CATAGATATTATAGATATGT+TGG | 0.494664 | 1.4:-48969240 | MS.gene73547:CDS |
| TTTGTCATTGCAAGATCCAC+TGG | 0.495522 | 1.4:+48974923 | None:intergenic |
| CGTTTGCAGCATGCTCAAAT+GGG | 0.497742 | 1.4:-48970982 | MS.gene73547:CDS |
| TGTGGCACAGCTCTACAGAT+TGG | 0.499086 | 1.4:-48972441 | MS.gene73547:CDS |
| ATTTAATTCATTTACATCAA+AGG | 0.503559 | 1.4:+48972170 | None:intergenic |
| ATGCTGCAAACGATGGACTC+AGG | 0.504036 | 1.4:+48970993 | None:intergenic |
| CCTGCAGAGCACAGGGCTCA+TGG | 0.505272 | 1.4:-48974393 | MS.gene73547:CDS |
| GAACTTCTAAAGGCACCATT+GGG | 0.505367 | 1.4:-48971868 | MS.gene73547:CDS |
| CTTAATGTTCCCCATTTCAC+AGG | 0.508548 | 1.4:+48974986 | None:intergenic |
| CGACCATTCAATGGCTGAAG+AGG | 0.512040 | 1.4:+48971820 | None:intergenic |
| ACCACTCCTCCATGCAAAGA+AGG | 0.513960 | 1.4:-48972108 | MS.gene73547:CDS |
| GTGGCACAGCTCTACAGATT+GGG | 0.514666 | 1.4:-48972440 | MS.gene73547:CDS |
| GGAACAACTAAAACTTCTAA+AGG | 0.517615 | 1.4:-48968965 | MS.gene73547:CDS |
| CGACCATTCAGTGGCTGAAG+AGG | 0.517939 | 1.4:+48968907 | None:intergenic |
| AGACCTCTTCAGCCATTGAA+TGG | 0.520919 | 1.4:-48971823 | MS.gene73547:CDS |
| TGCTTTGGCTCTATGCACTT+CGG | 0.521358 | 1.4:-48975159 | MS.gene73547:CDS |
| ACTACCCCTCCATGCAAAGA+AGG | 0.533789 | 1.4:-48969210 | MS.gene73547:CDS |
| CCTCTACATCAAACGTGCCA+AGG | 0.536082 | 1.4:+48969280 | None:intergenic |
| AGGCCTCTTCAGCCACTGAA+TGG | 0.536775 | 1.4:-48968910 | MS.gene73547:CDS |
| CAAGTGTAGCATTTGTAGGA+TGG | 0.539412 | 1.4:+48970882 | None:intergenic |
| CTTACAAACGACCATGAGCC+CGG | 0.541180 | 1.4:+48970467 | None:intergenic |
| ACCAAATGGTCCTGAGAAGT+GGG | 0.541655 | 1.4:-48971020 | MS.gene73547:CDS |
| GACCAAATGGTCCTGAGAAG+TGG | 0.543240 | 1.4:-48971021 | MS.gene73547:CDS |
| TAGCATCTTTATTGCCTGCA+CGG | 0.545045 | 1.4:+48972208 | None:intergenic |
| CAAGTGAGGCATTTGTAGGA+AGG | 0.546338 | 1.4:+48974858 | None:intergenic |
| GCATGCACCTGCAGAGCACA+GGG | 0.546819 | 1.4:-48974400 | MS.gene73547:CDS |
| TGACACCTTCTTTGCATGGA+GGG | 0.546979 | 1.4:+48969205 | None:intergenic |
| ACCTTCTTTGCATGGAGGAG+TGG | 0.550121 | 1.4:+48972107 | None:intergenic |
| ACATGAAGCCGAGCTCCACT+TGG | 0.552067 | 1.4:-48972498 | MS.gene73547:CDS |
| TAACAATAACATAGCAGTTG+TGG | 0.558155 | 1.4:-48972459 | MS.gene73547:CDS |
| ATACCCCAATACTGTATTGG+TGG | 0.560192 | 1.4:+48974831 | None:intergenic |
| AAAGATGCCAAAATTGCCCT+TGG | 0.561911 | 1.4:-48969297 | MS.gene73547:CDS |
| TTCCAAATACAGACATGAAG+CGG | 0.562427 | 1.4:-48969675 | MS.gene73547:intron |
| CTAGCCAACAAGAACCGTGC+AGG | 0.568911 | 1.4:-48972222 | MS.gene73547:CDS |
| TTTAGAGGGATACTAACATC+AGG | 0.569976 | 1.4:+48968774 | None:intergenic |
| TGCTGCAAACGATGGACTCA+GGG | 0.573943 | 1.4:+48970994 | None:intergenic |
| TTTGAGCATGCTGCAAACGA+TGG | 0.579578 | 1.4:+48970986 | None:intergenic |
| GACACCTTCTTTGCATGGAG+GGG | 0.587126 | 1.4:+48969206 | None:intergenic |
| TCCTGATCCTCTAATCTCCA+AGG | 0.594512 | 1.4:-48972414 | MS.gene73547:intron |
| GAGCCAAAGCAGCTATGGAA+AGG | 0.595398 | 1.4:+48975171 | None:intergenic |
| CTCTACATCAAACGTGCCAA+GGG | 0.596044 | 1.4:+48969281 | None:intergenic |
| TCCTGATCCTCTAATCTCCA+AGG | 0.598297 | 1.4:-48969579 | MS.gene73547:intron |
| TGCTGAAACTCTACACCCAA+TGG | 0.601021 | 1.4:+48971853 | None:intergenic |
| GAAGTGAACCAAGTGGAGCT+CGG | 0.602702 | 1.4:+48972490 | None:intergenic |
| CTATGCACTTCGGCAAATCA+CGG | 0.603804 | 1.4:-48975149 | MS.gene73547:intron |
| TGTTATTGTTATCTTCTGTG+AGG | 0.604430 | 1.4:+48969636 | None:intergenic |
| CAGGATCACCCAAATTGTAG+AGG | 0.616295 | 1.4:+48969597 | None:intergenic |
| CATTTGGAACGTCATTGGCA+AGG | 0.620353 | 1.4:-48972082 | MS.gene73547:intron |
| CATTTGGAACATCATTGGCA+AGG | 0.625922 | 1.4:-48969184 | MS.gene73547:intron |
| AAACTTCTAAAGGCACCACT+GGG | 0.635766 | 1.4:-48968955 | MS.gene73547:CDS |
| AGGATCACCCAAATTGTAGA+GGG | 0.637120 | 1.4:+48969598 | None:intergenic |
| TAACAACCAATTCAACATTG+GGG | 0.644450 | 1.4:-48970858 | MS.gene73547:intron |
| ATGACACCTTCTTTGCATGG+AGG | 0.651112 | 1.4:+48969204 | None:intergenic |
| TAGAGTTTCAGCATAACGCA+AGG | 0.651374 | 1.4:-48968930 | MS.gene73547:CDS |
| TGGGAAAGCACAAAGTCCAG+TGG | 0.656897 | 1.4:-48974939 | MS.gene73547:CDS |
| GCTAGCCAATGAGAATCGTG+TGG | 0.657074 | 1.4:-48969325 | MS.gene73547:CDS |
| CTTCAGTGAAGTGAACCAAG+TGG | 0.660345 | 1.4:+48972483 | None:intergenic |
| TGGGAAAGCACAAAGTCCAG+TGG | 0.663928 | 1.4:-48970963 | MS.gene73547:CDS |
| GTATTGGTGGTTAACAAGTG+AGG | 0.664761 | 1.4:+48974844 | None:intergenic |
| GATTGAGAAGTAAATCTGCA+AGG | 0.670914 | 1.4:+48975193 | None:intergenic |
| CTAGCCAATGAGAATCGTGT+GGG | 0.675900 | 1.4:-48969324 | MS.gene73547:CDS |
| CTTCTGTGAGGTGAACTAGG+TGG | 0.676418 | 1.4:+48969648 | None:intergenic |
| TGCTGAAACTCTACACCCAG+TGG | 0.677645 | 1.4:+48968940 | None:intergenic |
| TAACCACCAATACAGTATTG+GGG | 0.678105 | 1.4:-48974834 | MS.gene73547:intron |
| ATGACACCTTCTTTGCATGG+AGG | 0.682346 | 1.4:+48972102 | None:intergenic |
| CCAAATGGTCCTGTGAAATG+GGG | 0.689479 | 1.4:-48974995 | MS.gene73547:CDS |
| CCAAATGGTCCTGAGAAGTG+GGG | 0.710021 | 1.4:-48971019 | MS.gene73547:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATAAAAATAAATTTT+AGG | - | chr1.4:48971351-48971370 | MS.gene73547:intron | 0.0% |
| !!! | AAAAATAAAAATAAATTTTA+GGG | - | chr1.4:48971352-48971371 | MS.gene73547:intron | 0.0% |
| !! | AATATTTCCAATATAAATTA+TGG | + | chr1.4:48969917-48969936 | None:intergenic | 10.0% |
| !! | ACATCTAATTTAATATATAT+TGG | - | chr1.4:48974158-48974177 | MS.gene73547:intron | 10.0% |
| !! | ATATTTCCAATATAAATTAT+GGG | + | chr1.4:48969916-48969935 | None:intergenic | 10.0% |
| !! | TAAATGTAGAATATATTATT+TGG | - | chr1.4:48974560-48974579 | MS.gene73547:intron | 10.0% |
| !! | TATTACTTTACTATATAAAA+AGG | - | chr1.4:48971038-48971057 | MS.gene73547:intron | 10.0% |
| !! | TATTATTATTATTATTAGCA+AGG | - | chr1.4:48969313-48969332 | MS.gene73547:CDS | 10.0% |
| !! | TGCAAAAAATTAATAATTAT+AGG | - | chr1.4:48969947-48969966 | MS.gene73547:intron | 10.0% |
| !! | TTTATTATGTACAAAATAAA+AGG | + | chr1.4:48969660-48969679 | None:intergenic | 10.0% |
| !!! | ATTTGTTATTAAAAAACTTT+TGG | + | chr1.4:48970760-48970779 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAAACAGAAATA+GGG | - | chr1.4:48970875-48970894 | MS.gene73547:CDS | 10.0% |
| !!! | TTATATTGGAAATATTTTTT+TGG | - | chr1.4:48969921-48969940 | MS.gene73547:intron | 10.0% |
| !! | AAAAAAAGAAATAGTGATAT+TGG | - | chr1.4:48971076-48971095 | MS.gene73547:intron | 15.0% |
| !! | AAATATCGTTAATAAACTTT+AGG | - | chr1.4:48972228-48972247 | MS.gene73547:CDS | 15.0% |
| !! | AGTTATATAAATAGTTTGAA+AGG | + | chr1.4:48973997-48974016 | None:intergenic | 15.0% |
| !! | ATTTAATATATATTGGTACA+AGG | - | chr1.4:48974165-48974184 | MS.gene73547:intron | 15.0% |
| !! | ATTTAATTCATTTACATCAA+AGG | + | chr1.4:48971800-48971819 | None:intergenic | 15.0% |
| !! | ATTTGAAAAGTAAAAATGAT+TGG | + | chr1.4:48973258-48973277 | None:intergenic | 15.0% |
| !! | CATTTCATTTACAAAATTTA+CGG | + | chr1.4:48970020-48970039 | None:intergenic | 15.0% |
| !! | TAAAAACTACATTTAATTCA+TGG | + | chr1.4:48975135-48975154 | None:intergenic | 15.0% |
| !! | TAATTCAACAGAATATATAA+AGG | - | chr1.4:48971119-48971138 | MS.gene73547:intron | 15.0% |
| !! | TATAGATATTATAGATATGT+TGG | - | chr1.4:48971829-48971848 | MS.gene73547:CDS | 15.0% |
| !! | TCAAATTTATAAAACCAATT+CGG | + | chr1.4:48974856-48974875 | None:intergenic | 15.0% |
| !! | TGAAAAATACTTTAATGATT+TGG | - | chr1.4:48970038-48970057 | MS.gene73547:intron | 15.0% |
| !!! | AAATAGTTTTCTAACTTTAT+TGG | - | chr1.4:48971399-48971418 | MS.gene73547:intron | 15.0% |
| !!! | AAATTAATTTTTACGAGTAT+TGG | - | chr1.4:48971957-48971976 | MS.gene73547:intron | 15.0% |
| !!! | AATTCTATAATGTTTTTTAG+TGG | + | chr1.4:48973595-48973614 | None:intergenic | 15.0% |
| !!! | AATTGATATTTTTTTTTCAG+AGG | + | chr1.4:48971223-48971242 | None:intergenic | 15.0% |
| !!! | ATATAAAACCCAATTTTAAA+CGG | + | chr1.4:48970627-48970646 | None:intergenic | 15.0% |
| !!! | ATCACTTTACAATATATTTT+AGG | - | chr1.4:48971315-48971334 | MS.gene73547:intron | 15.0% |
| !!! | ATTAATAATTATAGGAGTAT+TGG | - | chr1.4:48969955-48969974 | MS.gene73547:intron | 15.0% |
| !!! | CATTTTTTTAAAACAGAAAT+AGG | - | chr1.4:48970874-48970893 | MS.gene73547:CDS | 15.0% |
| !!! | CTAATTTAATTTTTTCAATG+GGG | + | chr1.4:48969871-48969890 | None:intergenic | 15.0% |
| !!! | GCTAATTTAATTTTTTCAAT+GGG | + | chr1.4:48969872-48969891 | None:intergenic | 15.0% |
| !!! | TCAATTTAGATTTTAATAAG+TGG | - | chr1.4:48970538-48970557 | MS.gene73547:CDS | 15.0% |
| !!! | TCACTTTACAATATATTTTA+GGG | - | chr1.4:48971316-48971335 | MS.gene73547:intron | 15.0% |
| !!! | TGAATTTATTTTATTGTAGT+AGG | - | chr1.4:48970721-48970740 | MS.gene73547:intron | 15.0% |
| !!! | TTTGGACATTATTTTTTTTT+TGG | + | chr1.4:48970349-48970368 | None:intergenic | 15.0% |
| !!! | TTTGTATTAATTTTTGCTTT+TGG | - | chr1.4:48974930-48974949 | MS.gene73547:CDS | 15.0% |
| !! | AAAAATTTATACGCATCATT+TGG | + | chr1.4:48973826-48973845 | None:intergenic | 20.0% |
| !! | AAACAAAGTACACAATTATA+AGG | - | chr1.4:48973329-48973348 | MS.gene73547:intron | 20.0% |
| !! | AACTATAATTTAAATCAGAG+AGG | + | chr1.4:48969710-48969729 | None:intergenic | 20.0% |
| !! | ACAACTATTAATGATTGTAT+TGG | + | chr1.4:48970463-48970482 | None:intergenic | 20.0% |
| !! | ACTATAATTTAAATCAGAGA+GGG | + | chr1.4:48969709-48969728 | None:intergenic | 20.0% |
| !! | AGAAATTATACATGAATAGA+AGG | + | chr1.4:48972034-48972053 | None:intergenic | 20.0% |
| !! | AGTATATAAGGTTTATCATT+TGG | - | chr1.4:48971624-48971643 | MS.gene73547:intron | 20.0% |
| !! | ATATATGTACTATAAAGCAA+AGG | - | chr1.4:48972636-48972655 | MS.gene73547:intron | 20.0% |
| !! | ATCAAAGGAAAATTCTTATA+TGG | - | chr1.4:48969454-48969473 | MS.gene73547:intron | 20.0% |
| !! | ATGTAGAGGAAATAAATAAA+AGG | - | chr1.4:48974701-48974720 | MS.gene73547:intron | 20.0% |
| !! | ATTCCTCAAAAAAAACTATA+TGG | - | chr1.4:48970085-48970104 | MS.gene73547:intron | 20.0% |
| !! | CAACATATCTATAATATCTA+TGG | + | chr1.4:48971831-48971850 | None:intergenic | 20.0% |
| !! | CATAGATATTATAGATATGT+TGG | - | chr1.4:48974727-48974746 | MS.gene73547:intron | 20.0% |
| !! | TAATTCAACAGAATGTTTAA+AGG | - | chr1.4:48973935-48973954 | MS.gene73547:intron | 20.0% |
| !! | TACTCATTACTAGAATTATT+AGG | + | chr1.4:48970307-48970326 | None:intergenic | 20.0% |
| !! | TAGATAATAGCTATTCAAAA+TGG | - | chr1.4:48972697-48972716 | MS.gene73547:intron | 20.0% |
| !! | TTACTATGGAATATAATGTT+TGG | - | chr1.4:48970798-48970817 | MS.gene73547:intron | 20.0% |
| !! | TTATAGTACATATATAGTGA+TGG | + | chr1.4:48972631-48972650 | None:intergenic | 20.0% |
| !! | TTTATTCCTTTACAAAAATC+TGG | + | chr1.4:48974102-48974121 | None:intergenic | 20.0% |
| !!! | AAAATATAGGTACATTTTGA+AGG | - | chr1.4:48973402-48973421 | MS.gene73547:intron | 20.0% |
| !!! | AAAGTTTATAGTTCGTTTTA+CGG | - | chr1.4:48970397-48970416 | MS.gene73547:intron | 20.0% |
| !!! | AACTAACATTGTAATTTGTA+AGG | + | chr1.4:48974252-48974271 | None:intergenic | 20.0% |
| !!! | AATGTAAAGTAATTTGTGTT+TGG | - | chr1.4:48974895-48974914 | MS.gene73547:CDS | 20.0% |
| !!! | AATTTTAAACTATGGTTAGA+TGG | + | chr1.4:48970237-48970256 | None:intergenic | 20.0% |
| !!! | ACAAATTTTATGATAAAGCT+AGG | - | chr1.4:48975155-48975174 | MS.gene73547:CDS | 20.0% |
| !!! | ACTAACATTGTAATTTGTAA+GGG | + | chr1.4:48974251-48974270 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTTATGCTAGATT+CGG | - | chr1.4:48972905-48972924 | MS.gene73547:intron | 20.0% |
| !!! | ATACTTTTCCTATATAGAAA+AGG | - | chr1.4:48972480-48972499 | MS.gene73547:CDS | 20.0% |
| !!! | ATTAACGATATTTTAGTTCA+TGG | + | chr1.4:48972221-48972240 | None:intergenic | 20.0% |
| !!! | ATTGGAAACATTTTTTTTGA+GGG | - | chr1.4:48969973-48969992 | MS.gene73547:intron | 20.0% |
| !!! | CTAAAAAAGTGTAAAAATTG+TGG | - | chr1.4:48973160-48973179 | MS.gene73547:intron | 20.0% |
| !!! | GCTAAATAGATTTTTATTAG+AGG | + | chr1.4:48974229-48974248 | None:intergenic | 20.0% |
| !!! | GGCTAATTTAATTTTTTCAA+TGG | + | chr1.4:48969873-48969892 | None:intergenic | 20.0% |
| !!! | GTTTTGGTTTTTTTTTTATG+TGG | - | chr1.4:48969354-48969373 | MS.gene73547:intron | 20.0% |
| !!! | TAACCATATAGTTTTTTTTG+AGG | + | chr1.4:48970091-48970110 | None:intergenic | 20.0% |
| !!! | TAAGTGCAAATTTTTAGTTT+TGG | - | chr1.4:48969338-48969357 | MS.gene73547:CDS | 20.0% |
| !!! | TATAAAACCCAATTTTAAAC+GGG | + | chr1.4:48970626-48970645 | None:intergenic | 20.0% |
| !!! | TATTGGAAACATTTTTTTTG+AGG | - | chr1.4:48969972-48969991 | MS.gene73547:intron | 20.0% |
| !!! | TCGGTTAATTTTAGTTATAT+TGG | - | chr1.4:48972924-48972943 | MS.gene73547:intron | 20.0% |
| !!! | TTAGATTTTAATAAGTGGTT+GGG | - | chr1.4:48970543-48970562 | MS.gene73547:CDS | 20.0% |
| !!! | TTTAGATTTTAATAAGTGGT+TGG | - | chr1.4:48970542-48970561 | MS.gene73547:CDS | 20.0% |
| !!! | TTTTTTTTGAGGGATTATAT+TGG | - | chr1.4:48969983-48970002 | MS.gene73547:intron | 20.0% |
| ! | AAAATAGTTCTTGTGATCTT+TGG | + | chr1.4:48970367-48970386 | None:intergenic | 25.0% |
| ! | AACGTTCATATTTGATATCA+CGG | - | chr1.4:48974438-48974457 | MS.gene73547:CDS | 25.0% |
| ! | AACTATAATTTAAGTCAGAG+AGG | + | chr1.4:48973671-48973690 | None:intergenic | 25.0% |
| ! | AAGTACACAATTATAAGGTA+AGG | - | chr1.4:48973334-48973353 | MS.gene73547:intron | 25.0% |
| ! | AATTCTTATATGGTTGAGTT+TGG | - | chr1.4:48969464-48969483 | MS.gene73547:intron | 25.0% |
| ! | AATTCTTCTTATTGCAACTT+TGG | - | chr1.4:48972739-48972758 | MS.gene73547:intron | 25.0% |
| ! | ACTATAATTTAAGTCAGAGA+GGG | + | chr1.4:48973670-48973689 | None:intergenic | 25.0% |
| ! | ATATATATTGGTACAAGGAA+TGG | - | chr1.4:48974170-48974189 | MS.gene73547:intron | 25.0% |
| ! | ATCACATATTCACATGTAAT+TGG | + | chr1.4:48971692-48971711 | None:intergenic | 25.0% |
| ! | ATTCATTGAAACAACTTCAT+TGG | - | chr1.4:48969545-48969564 | MS.gene73547:intron | 25.0% |
| ! | CAATACATTCACAAAATCAA+GGG | - | chr1.4:48973554-48973573 | MS.gene73547:intron | 25.0% |
| ! | CTCCAATATTATGGTTAATT+TGG | + | chr1.4:48972588-48972607 | None:intergenic | 25.0% |
| ! | GTCCAAATTAACCATAATAT+TGG | - | chr1.4:48972583-48972602 | MS.gene73547:intron | 25.0% |
| ! | GTGGGAGATATTAATATAAA+TGG | - | chr1.4:48969514-48969533 | MS.gene73547:intron | 25.0% |
| ! | TAGATGTAGAATATACGATA+TGG | + | chr1.4:48974145-48974164 | None:intergenic | 25.0% |
| ! | TATATATTGGTACAAGGAAT+GGG | - | chr1.4:48974171-48974190 | MS.gene73547:intron | 25.0% |
| ! | TCAATTCTTTCATAGTCTAT+AGG | + | chr1.4:48972297-48972316 | None:intergenic | 25.0% |
| ! | TGACAACCCATAATTTATAT+TGG | - | chr1.4:48969907-48969926 | MS.gene73547:intron | 25.0% |
| ! | TGACTTAAATAACTTTACCT+TGG | + | chr1.4:48974408-48974427 | None:intergenic | 25.0% |
| ! | TGGAGTTTAGAAAAATGATA+CGG | - | chr1.4:48971096-48971115 | MS.gene73547:intron | 25.0% |
| ! | TTAACAACCAATTCAACATT+GGG | - | chr1.4:48973108-48973127 | MS.gene73547:intron | 25.0% |
| ! | TTTAGTTATATTGGACCAAA+TGG | - | chr1.4:48972933-48972952 | MS.gene73547:intron | 25.0% |
| !! | AATGTAAACCCGTTTAAAAT+TGG | - | chr1.4:48970615-48970634 | MS.gene73547:intron | 25.0% |
| !! | ACATGTGAATATGTGATTTT+TGG | - | chr1.4:48971695-48971714 | MS.gene73547:intron | 25.0% |
| !! | ACCATAGTTTAAAATTCTTC+AGG | - | chr1.4:48970241-48970260 | MS.gene73547:intron | 25.0% |
| !! | ACCTGAAGAATTTTAAACTA+TGG | + | chr1.4:48970245-48970264 | None:intergenic | 25.0% |
| !! | ATCAACTGCATCTATTATTT+TGG | + | chr1.4:48972843-48972862 | None:intergenic | 25.0% |
| !! | ATGTAAACCCGTTTAAAATT+GGG | - | chr1.4:48970616-48970635 | MS.gene73547:intron | 25.0% |
| !! | CTTGATTTTGTGAATGTATT+GGG | + | chr1.4:48973555-48973574 | None:intergenic | 25.0% |
| !! | TAGTTTTCTAACTTTATTGG+AGG | - | chr1.4:48971402-48971421 | MS.gene73547:intron | 25.0% |
| !! | TATTTATAGGTGCATTTTGA+AGG | - | chr1.4:48969487-48969506 | MS.gene73547:intron | 25.0% |
| !! | TTAGTTCCAGATTTTTGTAA+AGG | - | chr1.4:48974093-48974112 | MS.gene73547:intron | 25.0% |
| !! | TTATCTTTTCATGCTAGATT+CGG | - | chr1.4:48968929-48968948 | MS.gene73547:CDS | 25.0% |
| !! | TTTGTTGTCAAATTCTAGTT+TGG | + | chr1.4:48971183-48971202 | None:intergenic | 25.0% |
| !!! | ACAATAATCAAAAGGTACTA+TGG | + | chr1.4:48970901-48970920 | None:intergenic | 25.0% |
| !!! | ACTAGTTTTGGTTTTATCAA+AGG | - | chr1.4:48969439-48969458 | MS.gene73547:intron | 25.0% |
| !!! | ATTGGTTTTGTCATCTAAAT+AGG | - | chr1.4:48971975-48971994 | MS.gene73547:intron | 25.0% |
| !!! | CATGTTTTTATATGAAGTGT+CGG | + | chr1.4:48969225-48969244 | None:intergenic | 25.0% |
| !!! | GGTTGAGTTTGTTAAAATAT+AGG | - | chr1.4:48973389-48973408 | MS.gene73547:intron | 25.0% |
| !!! | TTGGTTTTTTTTTTATGTGG+TGG | - | chr1.4:48969357-48969376 | MS.gene73547:intron | 25.0% |
| AATTGTGATGTCAACTGATA+TGG | - | chr1.4:48973368-48973387 | MS.gene73547:intron | 30.0% | |
| ACAACATAACCAAATACACT+TGG | + | chr1.4:48971913-48971932 | None:intergenic | 30.0% | |
| AGGTACTAAGTTTAATCAGT+TGG | - | chr1.4:48974803-48974822 | MS.gene73547:intron | 30.0% | |
| AGTTTAATCAGTTGGTTATG+CGG | - | chr1.4:48974811-48974830 | MS.gene73547:intron | 30.0% | |
| ATCAAACAAAGCTGTCAAAA+TGG | + | chr1.4:48969771-48969790 | None:intergenic | 30.0% | |
| ATTATAAGGTAAGGTTGTTG+AGG | - | chr1.4:48973343-48973362 | MS.gene73547:intron | 30.0% | |
| CAACAGAATGTTTAAAGGAT+AGG | - | chr1.4:48973940-48973959 | MS.gene73547:intron | 30.0% | |
| CCAATACATTCACAAAATCA+AGG | - | chr1.4:48973553-48973572 | MS.gene73547:intron | 30.0% | |
| CGAGTTTCACAATAATCAAA+AGG | + | chr1.4:48970909-48970928 | None:intergenic | 30.0% | |
| CGGTAGTATATAGTTATGAT+GGG | + | chr1.4:48973190-48973209 | None:intergenic | 30.0% | |
| CTAGAATAAATCAGAATGCA+TGG | + | chr1.4:48974200-48974219 | None:intergenic | 30.0% | |
| GAAACAACTTGAACTTCTAA+AGG | - | chr1.4:48972089-48972108 | MS.gene73547:CDS | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr1.4:48969402-48969421 | None:intergenic | 30.0% | |
| GGAACAACTAAAACTTCTAA+AGG | - | chr1.4:48975002-48975021 | MS.gene73547:CDS | 30.0% | |
| GGTAGTATATAGTTATGATG+GGG | + | chr1.4:48973189-48973208 | None:intergenic | 30.0% | |
| GTATAGCTACTAATTACATG+TGG | - | chr1.4:48974586-48974605 | MS.gene73547:intron | 30.0% | |
| GTTAACAACCAATTCAACAT+TGG | - | chr1.4:48973107-48973126 | MS.gene73547:intron | 30.0% | |
| TAAAAAAGAGCTGCTTACTA+TGG | - | chr1.4:48970784-48970803 | MS.gene73547:intron | 30.0% | |
| TAACAACCAATTCAACATTG+GGG | - | chr1.4:48973109-48973128 | MS.gene73547:intron | 30.0% | |
| TAACAATAACATAGCAGTTG+TGG | - | chr1.4:48971508-48971527 | MS.gene73547:intron | 30.0% | |
| TATTATTATTAGTCGTGCCT+AGG | - | chr1.4:48973278-48973297 | MS.gene73547:intron | 30.0% | |
| TATTCTAATGATGTTCTACG+TGG | - | chr1.4:48972341-48972360 | MS.gene73547:intron | 30.0% | |
| TCATTTATTACAAGTTCCAC+TGG | + | chr1.4:48973023-48973042 | None:intergenic | 30.0% | |
| TCGGTAGTATATAGTTATGA+TGG | + | chr1.4:48973191-48973210 | None:intergenic | 30.0% | |
| TGAGTTTCACAATAATGAAC+AGG | + | chr1.4:48973725-48973744 | None:intergenic | 30.0% | |
| TGGTTGAGTTTGGTATTTAT+AGG | - | chr1.4:48969474-48969493 | MS.gene73547:intron | 30.0% | |
| TGTGTTCTTCTCCAATATTA+TGG | + | chr1.4:48972597-48972616 | None:intergenic | 30.0% | |
| TGTTATTGTTATCTTCTGTG+AGG | + | chr1.4:48974334-48974353 | None:intergenic | 30.0% | |
| TTAACAAGTGTAGCATTTGT+AGG | + | chr1.4:48973092-48973111 | None:intergenic | 30.0% | |
| TTAACCACCAATACAGTATT+GGG | - | chr1.4:48969132-48969151 | MS.gene73547:intron | 30.0% | |
| TTGGTGAAACATACACTATA+TGG | - | chr1.4:48970057-48970076 | MS.gene73547:intron | 30.0% | |
| TTTATGATAAAGCTAGGTAC+TGG | - | chr1.4:48975161-48975180 | MS.gene73547:CDS | 30.0% | |
| ! | AATGCTGTCCTTTTCTATAT+AGG | + | chr1.4:48972491-48972510 | None:intergenic | 30.0% |
| ! | ACTTTGTTTGTAACAGACAT+TGG | + | chr1.4:48973318-48973337 | None:intergenic | 30.0% |
| ! | CCTTGATTTTGTGAATGTAT+TGG | + | chr1.4:48973556-48973575 | None:intergenic | 30.0% |
| ! | TGGACAGTTTTCTATGATTA+AGG | - | chr1.4:48972361-48972380 | MS.gene73547:intron | 30.0% |
| !! | GAAATTGATTTTGACCGAAT+TGG | - | chr1.4:48974839-48974858 | MS.gene73547:CDS | 30.0% |
| !! | GTACATTTTGAAGGTAAAGT+GGG | - | chr1.4:48973411-48973430 | MS.gene73547:intron | 30.0% |
| !! | TAGAAGTTCAAGTTGTTTCT+TGG | + | chr1.4:48972088-48972107 | None:intergenic | 30.0% |
| !! | TGGTTAATTTGGACATTTTG+AGG | + | chr1.4:48972577-48972596 | None:intergenic | 30.0% |
| !!! | ATGTGATTTTAACTCTACCT+TGG | + | chr1.4:48971573-48971592 | None:intergenic | 30.0% |
| !!! | TCGGTTAATTTTAGCTATAC+TGG | - | chr1.4:48968948-48968967 | MS.gene73547:CDS | 30.0% |
| !!! | TTTTTTTTTATGTGGTGGCA+GGG | - | chr1.4:48969362-48969381 | MS.gene73547:intron | 30.0% |
| !!! | TTTTTTTTTTATGTGGTGGC+AGG | - | chr1.4:48969361-48969380 | MS.gene73547:intron | 30.0% |
| AAAGATGCTAACATTGCTCT+TGG | - | chr1.4:48971772-48971791 | MS.gene73547:intron | 35.0% | |
| AACTACCACAAATAGAGACA+TGG | - | chr1.4:48975099-48975118 | MS.gene73547:intron | 35.0% | |
| AACTTTACCTTGGAGATTAG+AGG | + | chr1.4:48974398-48974417 | None:intergenic | 35.0% | |
| AATACATTCCACCCAATCAA+GGG | - | chr1.4:48969629-48969648 | MS.gene73547:CDS | 35.0% | |
| ACTACCACAAATAGAGACAT+GGG | - | chr1.4:48975100-48975119 | MS.gene73547:intron | 35.0% | |
| ATTTACCACGAATCCAAACA+AGG | - | chr1.4:48974503-48974522 | MS.gene73547:intron | 35.0% | |
| CAAGAGTCAAGACTATAAAG+TGG | - | chr1.4:48974537-48974556 | MS.gene73547:intron | 35.0% | |
| CAGAATGTTTAAAGGATAGG+AGG | - | chr1.4:48973943-48973962 | MS.gene73547:intron | 35.0% | |
| CATATATAGTGATGGTTGTG+TGG | + | chr1.4:48972623-48972642 | None:intergenic | 35.0% | |
| CTATGGTTAGATGGAGAAAA+TGG | + | chr1.4:48970228-48970247 | None:intergenic | 35.0% | |
| GATTGAGAAGTAAATCTGCA+AGG | + | chr1.4:48968777-48968796 | None:intergenic | 35.0% | |
| GTTAACCACCAATACAGTAT+TGG | - | chr1.4:48969131-48969150 | MS.gene73547:intron | 35.0% | |
| TAACCACCAATACAGTATTG+GGG | - | chr1.4:48969133-48969152 | MS.gene73547:intron | 35.0% | |
| TACATACCCCAATACTGTAT+TGG | + | chr1.4:48969142-48969161 | None:intergenic | 35.0% | |
| TACATACCCCAATGTTGAAT+TGG | + | chr1.4:48973118-48973137 | None:intergenic | 35.0% | |
| TACATTCACAAAATCAAGGG+CGG | - | chr1.4:48973557-48973576 | MS.gene73547:intron | 35.0% | |
| TGAGTCATGTAATCCTTGTT+TGG | + | chr1.4:48974519-48974538 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | + | chr1.4:48969397-48969416 | None:intergenic | 35.0% | |
| TTCCAAATACAGACATGAAG+CGG | - | chr1.4:48974292-48974311 | MS.gene73547:intron | 35.0% | |
| TTCTTACCTATTGAACATGC+AGG | - | chr1.4:48972050-48972069 | MS.gene73547:intron | 35.0% | |
| TTCTTACTTAATGAGCATGC+AGG | - | chr1.4:48974963-48974982 | MS.gene73547:CDS | 35.0% | |
| TTGATTGGGTGGAATGTATT+GGG | + | chr1.4:48969629-48969648 | None:intergenic | 35.0% | |
| TTTAGAGGGATACTAACATC+AGG | + | chr1.4:48975196-48975215 | None:intergenic | 35.0% | |
| TTTAGCTATACTGGACCAAA+TGG | - | chr1.4:48968957-48968976 | MS.gene73547:CDS | 35.0% | |
| TTTGAGGATATGCTCAACTT+TGG | + | chr1.4:48972561-48972580 | None:intergenic | 35.0% | |
| ! | AGGTCAAAGCACTTTGTAAT+TGG | - | chr1.4:48972381-48972400 | MS.gene73547:intron | 35.0% |
| ! | TCAATTTTGCGACCATTCAA+TGG | + | chr1.4:48972159-48972178 | None:intergenic | 35.0% |
| ! | TTAACAAGTGAGGCATTTGT+AGG | + | chr1.4:48969116-48969135 | None:intergenic | 35.0% |
| !! | ACATAGTCGATTTGAAGTGT+CGG | + | chr1.4:48973210-48973229 | None:intergenic | 35.0% |
| !! | ACTTTATTGGAGGACTAGTT+TGG | - | chr1.4:48971412-48971431 | MS.gene73547:intron | 35.0% |
| !! | AGCTTGATAATGACAACTTG+AGG | - | chr1.4:48974025-48974044 | MS.gene73547:intron | 35.0% |
| !! | CTGATTACTTGTTATGACTG+AGG | - | chr1.4:48968904-48968923 | MS.gene73547:CDS | 35.0% |
| !! | GAACGTTTTGATAAGTGGTT+GGG | - | chr1.4:48970565-48970584 | MS.gene73547:intron | 35.0% |
| !! | GGTACATTTTGAAGGTAAAG+TGG | - | chr1.4:48973410-48973429 | MS.gene73547:intron | 35.0% |
| !! | GTGCATTTTGAAGGAAAAGT+GGG | - | chr1.4:48969496-48969515 | MS.gene73547:intron | 35.0% |
| AAAGATGCCAAAATTGCCCT+TGG | - | chr1.4:48974670-48974689 | MS.gene73547:intron | 40.0% | |
| AACTCTACCTTGGAGATTAG+AGG | + | chr1.4:48971563-48971582 | None:intergenic | 40.0% | |
| AAGAAGAAGAGAGAGGGAAA+AGG | + | chr1.4:48973528-48973547 | None:intergenic | 40.0% | |
| AATCCTTTCCATAGCTGCTT+TGG | - | chr1.4:48968793-48968812 | MS.gene73547:CDS | 40.0% | |
| ACCAAATGGTCCTGTGAAAT+GGG | - | chr1.4:48968971-48968990 | MS.gene73547:CDS | 40.0% | |
| ACCCTCTTTCTGATATACCA+CGG | + | chr1.4:48970825-48970844 | None:intergenic | 40.0% | |
| ACCTATTGAACATGCAGGTT+CGG | - | chr1.4:48972055-48972074 | MS.gene73547:intron | 40.0% | |
| ACTTAATGAGCATGCAGGTT+AGG | - | chr1.4:48974968-48974987 | MS.gene73547:CDS | 40.0% | |
| AGAAGAAGAGAGAGGGAAAA+GGG | + | chr1.4:48973527-48973546 | None:intergenic | 40.0% | |
| AGGAACCATAGATACTACTC+TGG | + | chr1.4:48970287-48970306 | None:intergenic | 40.0% | |
| AGGAAGGTAGTTTCTGTCTA+AGG | + | chr1.4:48969096-48969115 | None:intergenic | 40.0% | |
| AGGATATGCTCAACTTTGGA+TGG | + | chr1.4:48972557-48972576 | None:intergenic | 40.0% | |
| AGGATCACCCAAATTGTAGA+GGG | + | chr1.4:48974372-48974391 | None:intergenic | 40.0% | |
| ATACCCCAATACTGTATTGG+TGG | + | chr1.4:48969139-48969158 | None:intergenic | 40.0% | |
| ATATGCTCAACTTTGGATGG+TGG | + | chr1.4:48972554-48972573 | None:intergenic | 40.0% | |
| ATTGCAGCCCTCTACAATTT+GGG | - | chr1.4:48974362-48974381 | MS.gene73547:intron | 40.0% | |
| CAAATGACACCTTCTTTGCA+TGG | + | chr1.4:48971871-48971890 | None:intergenic | 40.0% | |
| CAAGTGTAGCATTTGTAGGA+TGG | + | chr1.4:48973088-48973107 | None:intergenic | 40.0% | |
| CAATACATTCCACCCAATCA+AGG | - | chr1.4:48969628-48969647 | MS.gene73547:CDS | 40.0% | |
| CAGAATCTGTAAATGCTCCT+TGG | - | chr1.4:48972453-48972472 | MS.gene73547:CDS | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | + | chr1.4:48969395-48969414 | None:intergenic | 40.0% | |
| CATTTGCAGCATGCTCAAAT+GGG | - | chr1.4:48969009-48969028 | MS.gene73547:intron | 40.0% | |
| CGGTAAATTTGTCGAAGTCA+TGG | - | chr1.4:48974458-48974477 | MS.gene73547:CDS | 40.0% | |
| CTTAATGTTCCCCATTTCAC+AGG | + | chr1.4:48968984-48969003 | None:intergenic | 40.0% | |
| CTTGATTGGGTGGAATGTAT+TGG | + | chr1.4:48969630-48969649 | None:intergenic | 40.0% | |
| GAATCCCATGTCTCTATTTG+TGG | + | chr1.4:48975107-48975126 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | + | chr1.4:48969396-48969415 | None:intergenic | 40.0% | |
| TAGAGTTTCAGCATAACGCA+AGG | - | chr1.4:48975037-48975056 | MS.gene73547:intron | 40.0% | |
| TAGCATCTTTATTGCCTGCA+CGG | + | chr1.4:48971762-48971781 | None:intergenic | 40.0% | |
| TATCTTCTGTGAGGTGAACT+AGG | + | chr1.4:48974325-48974344 | None:intergenic | 40.0% | |
| TATTAGTCGTGCCTAGGTAT+CGG | - | chr1.4:48973284-48973303 | MS.gene73547:intron | 40.0% | |
| TATTGCAGCCCTCTACAATT+TGG | - | chr1.4:48974361-48974380 | MS.gene73547:intron | 40.0% | |
| TCATTTGCAGCATGCTCAAA+TGG | - | chr1.4:48969008-48969027 | MS.gene73547:intron | 40.0% | |
| TGTACAACTACCACACATAG+AGG | - | chr1.4:48972181-48972200 | MS.gene73547:CDS | 40.0% | |
| TTTGTCATTGCAAGATCCAC+TGG | + | chr1.4:48969047-48969066 | None:intergenic | 40.0% | |
| ! | ATAGGAAAAGTATGCTGCCA+AGG | + | chr1.4:48972473-48972492 | None:intergenic | 40.0% |
| ! | ATTATGGGTTGTCACTGTTG+TGG | + | chr1.4:48969901-48969920 | None:intergenic | 40.0% |
| ! | CATTTGGAACATCATTGGCA+AGG | - | chr1.4:48974783-48974802 | MS.gene73547:intron | 40.0% |
| ! | GGAGTATCATACGAGGAATA+TGG | + | chr1.4:48972434-48972453 | None:intergenic | 40.0% |
| ! | GTAATCCTTGTTTGGATTCG+TGG | + | chr1.4:48974511-48974530 | None:intergenic | 40.0% |
| ! | GTATTGGTGGTTAACAAGTG+AGG | + | chr1.4:48969126-48969145 | None:intergenic | 40.0% |
| ! | TCAATTTTGCGACCATTCAG+TGG | + | chr1.4:48975072-48975091 | None:intergenic | 40.0% |
| !! | AAAACTTCTAAAGGCACCAC+TGG | - | chr1.4:48975011-48975030 | MS.gene73547:CDS | 40.0% |
| !! | AAAAGGCATCACCCTTGATT+GGG | + | chr1.4:48969643-48969662 | None:intergenic | 40.0% |
| !! | AAACTTCTAAAGGCACCACT+GGG | - | chr1.4:48975012-48975031 | MS.gene73547:CDS | 40.0% |
| !! | AGATTCTGGAGTATCATACG+AGG | + | chr1.4:48972441-48972460 | None:intergenic | 40.0% |
| !! | CAAGGAGCATTTACAGATTC+TGG | + | chr1.4:48972455-48972474 | None:intergenic | 40.0% |
| !! | CATGCAAAGAAGGTGTCATT+TGG | - | chr1.4:48971869-48971888 | MS.gene73547:CDS | 40.0% |
| !! | GAACTTCTAAAGGCACCATT+GGG | - | chr1.4:48972099-48972118 | MS.gene73547:CDS | 40.0% |
| !! | GATGGTGGATGAATTTGTTG+GGG | + | chr1.4:48972539-48972558 | None:intergenic | 40.0% |
| !! | GGAACGTTTTGATAAGTGGT+TGG | - | chr1.4:48970564-48970583 | MS.gene73547:intron | 40.0% |
| !! | GGATGGTGGATGAATTTGTT+GGG | + | chr1.4:48972540-48972559 | None:intergenic | 40.0% |
| !! | GGTGCATTTTGAAGGAAAAG+TGG | - | chr1.4:48969495-48969514 | MS.gene73547:intron | 40.0% |
| !! | GGTGTCATTTGGAACATCAT+TGG | - | chr1.4:48974778-48974797 | MS.gene73547:intron | 40.0% |
| !! | GTTGGGAACGTTTTGATAAG+TGG | - | chr1.4:48970560-48970579 | MS.gene73547:intron | 40.0% |
| !! | TAAAAGGCATCACCCTTGAT+TGG | + | chr1.4:48969644-48969663 | None:intergenic | 40.0% |
| !! | TGAACTTCTAAAGGCACCAT+TGG | - | chr1.4:48972098-48972117 | MS.gene73547:CDS | 40.0% |
| !! | TGGATGGTGGATGAATTTGT+TGG | + | chr1.4:48972541-48972560 | None:intergenic | 40.0% |
| !!! | TGTTTTTTAGTGGCCATACG+AGG | + | chr1.4:48973585-48973604 | None:intergenic | 40.0% |
| ACCAAATGGTCCTGAGAAGT+GGG | - | chr1.4:48972947-48972966 | MS.gene73547:intron | 45.0% | |
| ACCTTGGAGATTAGAGGATC+AGG | + | chr1.4:48971557-48971576 | None:intergenic | 45.0% | |
| AGACCTCTTCAGCCATTGAA+TGG | - | chr1.4:48972144-48972163 | MS.gene73547:CDS | 45.0% | |
| AGAGAGGGTTTCATCGATGT+TGG | + | chr1.4:48973655-48973674 | None:intergenic | 45.0% | |
| ATGACACCTTCTTTGCATGG+AGG | + | chr1.4:48971868-48971887 | None:intergenic | 45.0% | |
| ATTGCCCACACGATTCTCAT+TGG | + | chr1.4:48974650-48974669 | None:intergenic | 45.0% | |
| ATTGTCCCTACCAACTGATG+GGG | - | chr1.4:48969416-48969435 | MS.gene73547:intron | 45.0% | |
| CAAAACTAGTCCCCATCAGT+TGG | + | chr1.4:48969429-48969448 | None:intergenic | 45.0% | |
| CACGACCAGAGTAGTATCTA+TGG | - | chr1.4:48970279-48970298 | MS.gene73547:intron | 45.0% | |
| CAGGATCACCCAAATTGTAG+AGG | + | chr1.4:48974373-48974392 | None:intergenic | 45.0% | |
| CATTGTCCCTACCAACTGAT+GGG | - | chr1.4:48969415-48969434 | MS.gene73547:intron | 45.0% | |
| CCAAATGGTCCTGTGAAATG+GGG | - | chr1.4:48968972-48968991 | MS.gene73547:CDS | 45.0% | |
| CCCGTGGTATATCAGAAAGA+GGG | - | chr1.4:48970821-48970840 | MS.gene73547:intron | 45.0% | |
| CCCTCTTTCTGATATACCAC+GGG | + | chr1.4:48970824-48970843 | None:intergenic | 45.0% | |
| CGTTTGCAGCATGCTCAAAT+GGG | - | chr1.4:48972985-48973004 | MS.gene73547:intron | 45.0% | |
| CTAGCCAATGAGAATCGTGT+GGG | - | chr1.4:48974643-48974662 | MS.gene73547:intron | 45.0% | |
| CTATGCACTTCGGCAAATCA+CGG | - | chr1.4:48968818-48968837 | MS.gene73547:intron | 45.0% | |
| CTCCGCTTCATGTCTGTATT+TGG | + | chr1.4:48974297-48974316 | None:intergenic | 45.0% | |
| CTCTACATCAAACGTGCCAA+GGG | + | chr1.4:48974689-48974708 | None:intergenic | 45.0% | |
| CTTCAGTGAAGTGAACCAAG+TGG | + | chr1.4:48971487-48971506 | None:intergenic | 45.0% | |
| GACCAAATGGTCCTGTGAAA+TGG | - | chr1.4:48968970-48968989 | MS.gene73547:CDS | 45.0% | |
| GGAATATAATGTTTGGCCCG+TGG | - | chr1.4:48970805-48970824 | MS.gene73547:intron | 45.0% | |
| GGAGAGAAGAAGAAGAGAGA+GGG | + | chr1.4:48973534-48973553 | None:intergenic | 45.0% | |
| GGGGTTACTTACAAGATCAG+TGG | + | chr1.4:48972520-48972539 | None:intergenic | 45.0% | |
| TATTGGGAGAGCAGAAGAGA+GGG | + | chr1.4:48969613-48969632 | None:intergenic | 45.0% | |
| TCCGAACCTGCATGTTCAAT+AGG | + | chr1.4:48972059-48972078 | None:intergenic | 45.0% | |
| TCCTGATCCTCTAATCTCCA+AGG | - | chr1.4:48971553-48971572 | MS.gene73547:intron | 45.0% | |
| TCGTTTGCAGCATGCTCAAA+TGG | - | chr1.4:48972984-48973003 | MS.gene73547:intron | 45.0% | |
| TGACACCTTCTTTGCATGGA+GGG | + | chr1.4:48971867-48971886 | None:intergenic | 45.0% | |
| TGCTGAAACTCTACACCCAA+TGG | + | chr1.4:48972117-48972136 | None:intergenic | 45.0% | |
| TTTGAGCATGCTGCAAACGA+TGG | + | chr1.4:48972984-48973003 | None:intergenic | 45.0% | |
| ! | AAACGTGCCAAGGGCAATTT+TGG | + | chr1.4:48974680-48974699 | None:intergenic | 45.0% |
| ! | CAAGTGAGGCATTTGTAGGA+AGG | + | chr1.4:48969112-48969131 | None:intergenic | 45.0% |
| ! | CATTTGGAACGTCATTGGCA+AGG | - | chr1.4:48971885-48971904 | MS.gene73547:CDS | 45.0% |
| ! | GGCAAGGTACCAAGTGTATT+TGG | - | chr1.4:48971901-48971920 | MS.gene73547:intron | 45.0% |
| !! | GGTGTCATTTGGAACGTCAT+TGG | - | chr1.4:48971880-48971899 | MS.gene73547:CDS | 45.0% |
| !! | TGCTTTGGCTCTATGCACTT+CGG | - | chr1.4:48968808-48968827 | MS.gene73547:intron | 45.0% |
| !!! | CAACTGATGGGGACTAGTTT+TGG | - | chr1.4:48969427-48969446 | MS.gene73547:intron | 45.0% |
| !! | TATATAATATAAAGTATATA+AGG | - | chr1.4:48971612-48971631 | MS.gene73547:intron | 5.0% |
| !!! | AAAATAAAAATAAATTTTAG+GGG | - | chr1.4:48971353-48971372 | MS.gene73547:intron | 5.0% |
| !!! | AATTTTTTAAAAAAAAGATA+TGG | - | chr1.4:48973912-48973931 | MS.gene73547:intron | 5.0% |
| !!! | TTATTTTTATTTTTTTTGAA+AGG | + | chr1.4:48971346-48971365 | None:intergenic | 5.0% |
| ACCACTCCTCCATGCAAAGA+AGG | - | chr1.4:48971859-48971878 | MS.gene73547:CDS | 50.0% | |
| ACCTTCTTTGCATGGAGGAG+TGG | + | chr1.4:48971863-48971882 | None:intergenic | 50.0% | |
| ACTACCCCTCCATGCAAAGA+AGG | - | chr1.4:48974757-48974776 | MS.gene73547:intron | 50.0% | |
| ACTAGTCCCCATCAGTTGGT+AGG | + | chr1.4:48969425-48969444 | None:intergenic | 50.0% | |
| ATTGCCTGCACGGTTCTTGT+TGG | + | chr1.4:48971752-48971771 | None:intergenic | 50.0% | |
| CAACTACCACACATAGAGGC+AGG | - | chr1.4:48972185-48972204 | MS.gene73547:CDS | 50.0% | |
| CCAAATGGTCCTGAGAAGTG+GGG | - | chr1.4:48972948-48972967 | MS.gene73547:intron | 50.0% | |
| CCCCATTTCACAGGACCATT+TGG | + | chr1.4:48968975-48968994 | None:intergenic | 50.0% | |
| CCTCTACATCAAACGTGCCA+AGG | + | chr1.4:48974690-48974709 | None:intergenic | 50.0% | |
| CCTTGGCACGTTTGATGTAG+AGG | - | chr1.4:48974687-48974706 | MS.gene73547:intron | 50.0% | |
| CGACCATTCAATGGCTGAAG+AGG | + | chr1.4:48972150-48972169 | None:intergenic | 50.0% | |
| CTTACAAACGACCATGAGCC+CGG | + | chr1.4:48973503-48973522 | None:intergenic | 50.0% | |
| CTTCTGTGAGGTGAACTAGG+TGG | + | chr1.4:48974322-48974341 | None:intergenic | 50.0% | |
| GAAGTGAACCAAGTGGAGCT+CGG | + | chr1.4:48971480-48971499 | None:intergenic | 50.0% | |
| GACACCTTCTTTGCATGGAG+GGG | + | chr1.4:48971866-48971885 | None:intergenic | 50.0% | |
| GACCAAATGGTCCTGAGAAG+TGG | - | chr1.4:48972946-48972965 | MS.gene73547:intron | 50.0% | |
| GAGCCAAAGCAGCTATGGAA+AGG | + | chr1.4:48968799-48968818 | None:intergenic | 50.0% | |
| GCAGGTTAGGACACTCTCTA+AGG | - | chr1.4:48974981-48975000 | MS.gene73547:CDS | 50.0% | |
| GCATAGAGCCAAAGCAGCTA+TGG | + | chr1.4:48968804-48968823 | None:intergenic | 50.0% | |
| GCATTGTCCCTACCAACTGA+TGG | - | chr1.4:48969414-48969433 | MS.gene73547:intron | 50.0% | |
| GCCCGTGGTATATCAGAAAG+AGG | - | chr1.4:48970820-48970839 | MS.gene73547:intron | 50.0% | |
| GCTAGCCAATGAGAATCGTG+TGG | - | chr1.4:48974642-48974661 | MS.gene73547:intron | 50.0% | |
| GGGAGAGAAGAAGAAGAGAG+AGG | + | chr1.4:48973535-48973554 | None:intergenic | 50.0% | |
| GTATTGGGAGAGCAGAAGAG+AGG | + | chr1.4:48969614-48969633 | None:intergenic | 50.0% | |
| GTGGCACAGCTCTACAGATT+GGG | - | chr1.4:48971527-48971546 | MS.gene73547:intron | 50.0% | |
| GTTGTCACTGTTGTGGCACA+CGG | + | chr1.4:48969894-48969913 | None:intergenic | 50.0% | |
| TGAACTCCTGCCTCTATGTG+TGG | + | chr1.4:48972194-48972213 | None:intergenic | 50.0% | |
| TGCTGAAACTCTACACCCAG+TGG | + | chr1.4:48975030-48975049 | None:intergenic | 50.0% | |
| TGTGGCACAGCTCTACAGAT+TGG | - | chr1.4:48971526-48971545 | MS.gene73547:intron | 50.0% | |
| ! | ATGCTGCAAACGATGGACTC+AGG | + | chr1.4:48972977-48972996 | None:intergenic | 50.0% |
| ! | CTAGTCCCCATCAGTTGGTA+GGG | + | chr1.4:48969424-48969443 | None:intergenic | 50.0% |
| ! | TGCTGCAAACGATGGACTCA+GGG | + | chr1.4:48972976-48972995 | None:intergenic | 50.0% |
| ! | TGGGAAAGCACAAAGTCCAG+TGG | - | chr1.4:48969028-48969047 | MS.gene73547:intron | 50.0% |
| ACATGAAGCCGAGCTCCACT+TGG | - | chr1.4:48971469-48971488 | MS.gene73547:intron | 55.0% | |
| AGGCATCACCCTTGATTGGG+TGG | + | chr1.4:48969640-48969659 | None:intergenic | 55.0% | |
| AGGCCTCTTCAGCCACTGAA+TGG | - | chr1.4:48975057-48975076 | MS.gene73547:intron | 55.0% | |
| CCCCACTTCTCAGGACCATT+TGG | + | chr1.4:48972951-48972970 | None:intergenic | 55.0% | |
| CGACCATTCAGTGGCTGAAG+AGG | + | chr1.4:48975063-48975082 | None:intergenic | 55.0% | |
| CTAGCCAACAAGAACCGTGC+AGG | - | chr1.4:48971745-48971764 | MS.gene73547:intron | 55.0% | |
| TGGACCCAACACCGATACCT+AGG | + | chr1.4:48973298-48973317 | None:intergenic | 55.0% | |
| !! | CGTGCCTAGGTATCGGTGTT+GGG | - | chr1.4:48973291-48973310 | MS.gene73547:intron | 55.0% |
| !! | TCGTGCCTAGGTATCGGTGT+TGG | - | chr1.4:48973290-48973309 | MS.gene73547:intron | 55.0% |
| ATCAAGGGCGGTGCCTCGTA+TGG | - | chr1.4:48973569-48973588 | MS.gene73547:intron | 60.0% | |
| CTCAGGGTTCCCCACTTCTC+AGG | + | chr1.4:48972960-48972979 | None:intergenic | 60.0% | |
| GCATGCACCTGCAGAGCACA+GGG | - | chr1.4:48969567-48969586 | MS.gene73547:intron | 60.0% | |
| GGTGGCAGGGATTTGAACCC+CGG | - | chr1.4:48969375-48969394 | MS.gene73547:intron | 60.0% | |
| CCATGAGCCCTGTGCTCTGC+AGG | + | chr1.4:48969577-48969596 | None:intergenic | 65.0% | |
| CCTGCAGAGCACAGGGCTCA+TGG | - | chr1.4:48969574-48969593 | MS.gene73547:intron | 65.0% | |
| GGCATGCACCTGCAGAGCAC+AGG | - | chr1.4:48969566-48969585 | MS.gene73547:intron | 65.0% | |
| GGCATGCTCCTGCAGAGCAC+CGG | - | chr1.4:48973481-48973500 | MS.gene73547:intron | 65.0% | |
| ! | GCATGCTCCTGCAGAGCACC+GGG | - | chr1.4:48973482-48973501 | MS.gene73547:intron | 65.0% |
| CCATGAGCCCGGTGCTCTGC+AGG | + | chr1.4:48973492-48973511 | None:intergenic | 70.0% | |
| !! | CCTGCAGAGCACCGGGCTCA+TGG | - | chr1.4:48973489-48973508 | MS.gene73547:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 48968770 | 48975219 | 48968770 | ID=MS.gene73547 |
| chr1.4 | mRNA | 48968770 | 48975219 | 48968770 | ID=MS.gene73547.t1;Parent=MS.gene73547 |
| chr1.4 | exon | 48975150 | 48975219 | 48975150 | ID=MS.gene73547.t1.exon1;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48975150 | 48975219 | 48975150 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48974835 | 48975043 | 48974835 | ID=MS.gene73547.t1.exon2;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48974835 | 48975043 | 48974835 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48974387 | 48974493 | 48974387 | ID=MS.gene73547.t1.exon3;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48974387 | 48974493 | 48974387 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48972415 | 48972520 | 48972415 | ID=MS.gene73547.t1.exon4;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48972415 | 48972520 | 48972415 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48972083 | 48972265 | 48972083 | ID=MS.gene73547.t1.exon5;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48972083 | 48972265 | 48972083 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48971808 | 48971917 | 48971808 | ID=MS.gene73547.t1.exon6;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48971808 | 48971917 | 48971808 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48970859 | 48971051 | 48970859 | ID=MS.gene73547.t1.exon7;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48970859 | 48971051 | 48970859 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48970472 | 48970578 | 48970472 | ID=MS.gene73547.t1.exon8;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48970472 | 48970578 | 48970472 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48969580 | 48969685 | 48969580 | ID=MS.gene73547.t1.exon9;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48969580 | 48969685 | 48969580 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48969185 | 48969367 | 48969185 | ID=MS.gene73547.t1.exon10;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48969185 | 48969367 | 48969185 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48968895 | 48969004 | 48968895 | ID=MS.gene73547.t1.exon11;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48968895 | 48969004 | 48968895 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| chr1.4 | exon | 48968770 | 48968812 | 48968770 | ID=MS.gene73547.t1.exon12;Parent=MS.gene73547.t1 |
| chr1.4 | CDS | 48968770 | 48968812 | 48968770 | ID=cds.MS.gene73547.t1;Parent=MS.gene73547.t1 |
| Gene Sequence |
| Protein sequence |
