Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78719.t1 | XP_003614423.1 | 98.6 | 575 | 6 | 1 | 1 | 573 | 1 | 575 | 0.00E+00 | 1142.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78719.t1 | Q9S713 | 79.8 | 515 | 104 | 0 | 59 | 573 | 48 | 562 | 1.9e-250 | 866.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78719.t1 | G7JX40 | 98.6 | 575 | 6 | 1 | 1 | 573 | 1 | 575 | 0.0e+00 | 1142.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene78719 | 0.814301 | 1.65E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene78719 | 0.903388 | 3.65E-79 | -1.69E-46 |
| MS.gene049369 | MS.gene78719 | 0.899572 | 1.74E-77 | -1.69E-46 |
| MS.gene049396 | MS.gene78719 | 0.862857 | 3.77E-64 | -1.69E-46 |
| MS.gene049427 | MS.gene78719 | 0.824778 | 6.71E-54 | -1.69E-46 |
| MS.gene049488 | MS.gene78719 | 0.811857 | 5.68E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene78719 | 0.831496 | 1.62E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene78719 | 0.829506 | 4.95E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene78719 | -0.802894 | 4.52E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene78719 | 0.802197 | 6.29E-49 | -1.69E-46 |
| MS.gene050499 | MS.gene78719 | 0.812116 | 4.98E-51 | -1.69E-46 |
| MS.gene050502 | MS.gene78719 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene78719 | 0.806772 | 6.99E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene78719 | 0.816485 | 5.40E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene78719 | 0.84076 | 7.16E-58 | -1.69E-46 |
| MS.gene050670 | MS.gene78719 | 0.86141 | 1.05E-63 | -1.69E-46 |
| MS.gene050747 | MS.gene78719 | 0.842888 | 1.96E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene78719 | 0.828486 | 8.76E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene78719 | 0.812739 | 3.64E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene78719 | 0.841104 | 5.82E-58 | -1.69E-46 |
| MS.gene050971 | MS.gene78719 | 0.835844 | 1.32E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene78719 | 0.856504 | 3.08E-62 | -1.69E-46 |
| MS.gene051360 | MS.gene78719 | 0.838104 | 3.51E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene78719 | 0.811466 | 6.90E-51 | -1.69E-46 |
| MS.gene051617 | MS.gene78719 | 0.807617 | 4.63E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene78719 | 0.847791 | 9.25E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene78719 | 0.813979 | 1.95E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene78719 | 0.830082 | 3.59E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene78719 | 0.833732 | 4.50E-56 | -1.69E-46 |
| MS.gene052134 | MS.gene78719 | 0.842107 | 3.16E-58 | -1.69E-46 |
| MS.gene052135 | MS.gene78719 | 0.854733 | 1.01E-61 | -1.69E-46 |
| MS.gene052136 | MS.gene78719 | 0.879497 | 1.19E-69 | -1.69E-46 |
| MS.gene052188 | MS.gene78719 | 0.865057 | 7.78E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene78719 | 0.831462 | 1.65E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene78719 | 0.817913 | 2.58E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene78719 | 0.845921 | 3.00E-59 | -1.69E-46 |
| MS.gene052346 | MS.gene78719 | 0.836909 | 7.10E-57 | -1.69E-46 |
| MS.gene052414 | MS.gene78719 | 0.907362 | 5.50E-81 | -1.69E-46 |
| MS.gene052421 | MS.gene78719 | 0.827333 | 1.66E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene78719 | 0.818978 | 1.48E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene78719 | 0.82959 | 4.73E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene78719 | 0.835043 | 2.11E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene78719 | 0.814547 | 1.46E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene78719 | 0.813144 | 2.97E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene78719 | 0.824274 | 8.82E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene78719 | 0.806228 | 9.11E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene78719 | 0.836962 | 6.88E-57 | -1.69E-46 |
| MS.gene05316 | MS.gene78719 | 0.803219 | 3.87E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene78719 | 0.814269 | 1.68E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene78719 | 0.823623 | 1.25E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene78719 | 0.872952 | 2.14E-67 | -1.69E-46 |
| MS.gene053557 | MS.gene78719 | 0.800494 | 1.40E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene78719 | 0.853521 | 2.26E-61 | -1.69E-46 |
| MS.gene053758 | MS.gene78719 | 0.840605 | 7.86E-58 | -1.69E-46 |
| MS.gene053912 | MS.gene78719 | 0.892036 | 2.30E-74 | -1.69E-46 |
| MS.gene053916 | MS.gene78719 | 0.822818 | 1.93E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene78719 | 0.818765 | 1.65E-52 | -1.69E-46 |
| MS.gene054349 | MS.gene78719 | 0.811551 | 6.62E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene78719 | 0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene78719 | 0.830217 | 3.33E-55 | -1.69E-46 |
| MS.gene054955 | MS.gene78719 | 0.816029 | 6.83E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene78719 | 0.850126 | 2.08E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene78719 | 0.867985 | 9.14E-66 | -1.69E-46 |
| MS.gene055224 | MS.gene78719 | 0.816182 | 6.31E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene78719 | 0.82152 | 3.86E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene78719 | 0.823612 | 1.26E-53 | -1.69E-46 |
| MS.gene055539 | MS.gene78719 | 0.826692 | 2.36E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene78719 | 0.82982 | 4.16E-55 | -1.69E-46 |
| MS.gene055741 | MS.gene78719 | 0.848623 | 5.45E-60 | -1.69E-46 |
| MS.gene055744 | MS.gene78719 | 0.853869 | 1.80E-61 | -1.69E-46 |
| MS.gene055909 | MS.gene78719 | 0.854538 | 1.15E-61 | -1.69E-46 |
| MS.gene055911 | MS.gene78719 | 0.850687 | 1.45E-60 | -1.69E-46 |
| MS.gene05592 | MS.gene78719 | 0.804586 | 2.01E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene78719 | 0.835339 | 1.78E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene78719 | 0.801972 | 7.00E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene78719 | 0.856352 | 3.41E-62 | -1.69E-46 |
| MS.gene056448 | MS.gene78719 | 0.806146 | 9.48E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene78719 | 0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene78719 | 0.893322 | 7.00E-75 | -1.69E-46 |
| MS.gene056609 | MS.gene78719 | 0.852777 | 3.69E-61 | -1.69E-46 |
| MS.gene05664 | MS.gene78719 | 0.865833 | 4.43E-65 | -1.69E-46 |
| MS.gene056659 | MS.gene78719 | 0.822637 | 2.13E-53 | -1.69E-46 |
| MS.gene05666 | MS.gene78719 | 0.869883 | 2.22E-66 | -1.69E-46 |
| MS.gene056876 | MS.gene78719 | 0.817186 | 3.76E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene78719 | 0.836589 | 8.56E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene78719 | 0.849463 | 3.18E-60 | -1.69E-46 |
| MS.gene057086 | MS.gene78719 | 0.828534 | 8.52E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene78719 | 0.874082 | 8.92E-68 | -1.69E-46 |
| MS.gene057331 | MS.gene78719 | 0.818723 | 1.69E-52 | -1.69E-46 |
| MS.gene05735 | MS.gene78719 | 0.837539 | 4.90E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene78719 | 0.839847 | 1.24E-57 | -1.69E-46 |
| MS.gene057448 | MS.gene78719 | 0.81849 | 1.91E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene78719 | 0.823781 | 1.15E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene78719 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene057503 | MS.gene78719 | 0.805053 | 1.61E-49 | -1.69E-46 |
| MS.gene057537 | MS.gene78719 | 0.859223 | 4.80E-63 | -1.69E-46 |
| MS.gene057734 | MS.gene78719 | 0.892805 | 1.13E-74 | -1.69E-46 |
| MS.gene057749 | MS.gene78719 | 0.817177 | 3.78E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene78719 | 0.820427 | 6.90E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene78719 | 0.811961 | 5.39E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene78719 | 0.817805 | 2.73E-52 | -1.69E-46 |
| MS.gene057927 | MS.gene78719 | 0.83865 | 2.53E-57 | -1.69E-46 |
| MS.gene058007 | MS.gene78719 | 0.848261 | 6.86E-60 | -1.69E-46 |
| MS.gene058019 | MS.gene78719 | 0.810169 | 1.32E-50 | -1.69E-46 |
| MS.gene058075 | MS.gene78719 | 0.807533 | 4.82E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene78719 | 0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene058090 | MS.gene78719 | 0.831999 | 1.21E-55 | -1.69E-46 |
| MS.gene058120 | MS.gene78719 | 0.863945 | 1.73E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene78719 | 0.813162 | 2.94E-51 | -1.69E-46 |
| MS.gene058365 | MS.gene78719 | 0.800758 | 1.24E-48 | -1.69E-46 |
| MS.gene058376 | MS.gene78719 | 0.826315 | 2.90E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene78719 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene058459 | MS.gene78719 | 0.814915 | 1.21E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene78719 | 0.80236 | 5.82E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene78719 | 0.82983 | 4.13E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene78719 | 0.870993 | 9.58E-67 | -1.69E-46 |
| MS.gene058948 | MS.gene78719 | 0.871198 | 8.20E-67 | -1.69E-46 |
| MS.gene058949 | MS.gene78719 | 0.801685 | 8.01E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene78719 | 0.81322 | 2.86E-51 | -1.69E-46 |
| MS.gene059305 | MS.gene78719 | 0.812751 | 3.62E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene78719 | 0.823739 | 1.18E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene78719 | 0.871198 | 8.20E-67 | -1.69E-46 |
| MS.gene059367 | MS.gene78719 | 0.808435 | 3.10E-50 | -1.69E-46 |
| MS.gene059368 | MS.gene78719 | 0.841768 | 3.89E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene78719 | 0.825988 | 3.47E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene78719 | 0.83608 | 1.15E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene78719 | 0.81616 | 6.38E-52 | -1.69E-46 |
| MS.gene05959 | MS.gene78719 | 0.810461 | 1.14E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene78719 | 0.80586 | 1.09E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene78719 | 0.851697 | 7.49E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene78719 | 0.81378 | 2.15E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene78719 | 0.854144 | 1.50E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene78719 | 0.837995 | 3.74E-57 | -1.69E-46 |
| MS.gene059695 | MS.gene78719 | 0.832267 | 1.04E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene78719 | 0.830063 | 3.63E-55 | -1.69E-46 |
| MS.gene059807 | MS.gene78719 | 0.882596 | 9.12E-71 | -1.69E-46 |
| MS.gene060372 | MS.gene78719 | 0.815662 | 8.24E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene78719 | 0.832156 | 1.11E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene78719 | 0.873846 | 1.07E-67 | -1.69E-46 |
| MS.gene060818 | MS.gene78719 | 0.833757 | 4.44E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene78719 | 0.876303 | 1.55E-68 | -1.69E-46 |
| MS.gene060837 | MS.gene78719 | 0.88278 | 7.82E-71 | -1.69E-46 |
| MS.gene06097 | MS.gene78719 | 0.83825 | 3.22E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene78719 | 0.880512 | 5.16E-70 | -1.69E-46 |
| MS.gene061051 | MS.gene78719 | -0.866406 | 2.92E-65 | -1.69E-46 |
| MS.gene061154 | MS.gene78719 | 0.865078 | 7.66E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78719.t1 | MTR_5g053450 | 98.609 | 575 | 6 | 1 | 1 | 573 | 1 | 575 | 0.0 | 1162 |
| MS.gene78719.t1 | MTR_7g073530 | 39.340 | 394 | 198 | 9 | 104 | 463 | 86 | 472 | 9.29e-85 | 272 |
| MS.gene78719.t1 | MTR_8g005720 | 40.580 | 414 | 185 | 9 | 105 | 479 | 92 | 483 | 5.77e-79 | 258 |
| MS.gene78719.t1 | MTR_7g073540 | 32.124 | 193 | 87 | 5 | 271 | 463 | 1 | 149 | 3.32e-21 | 91.3 |
| MS.gene78719.t1 | MTR_7g073560 | 41.905 | 105 | 52 | 2 | 362 | 463 | 21 | 119 | 2.66e-17 | 79.3 |
| MS.gene78719.t1 | MTR_7g073610 | 41.905 | 105 | 52 | 2 | 362 | 463 | 21 | 119 | 2.66e-17 | 79.3 |
| MS.gene78719.t1 | MTR_4g007750 | 30.374 | 214 | 109 | 7 | 264 | 464 | 118 | 304 | 2.53e-15 | 77.4 |
| MS.gene78719.t1 | MTR_1g075610 | 27.830 | 212 | 111 | 6 | 267 | 464 | 126 | 309 | 6.39e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78719.t1 | AT1G68830 | 76.963 | 573 | 121 | 3 | 1 | 573 | 1 | 562 | 0.0 | 905 |
| MS.gene78719.t1 | AT5G01920 | 41.191 | 403 | 193 | 7 | 112 | 477 | 96 | 491 | 2.40e-88 | 282 |
| MS.gene78719.t1 | AT5G01920 | 41.191 | 403 | 193 | 7 | 112 | 477 | 96 | 491 | 2.40e-88 | 282 |
| MS.gene78719.t1 | AT2G38620 | 30.986 | 213 | 111 | 7 | 263 | 464 | 55 | 242 | 1.33e-15 | 77.4 |
| MS.gene78719.t1 | AT2G38620 | 27.566 | 341 | 178 | 14 | 149 | 464 | 8 | 304 | 1.55e-15 | 78.2 |
Find 116 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATCCATACTCTCGTTTA+AGG | 0.134787 | 5.4:+42403796 | None:intergenic |
| TTGGTGCTTTGTCTTATCTT+TGG | 0.201448 | 5.4:-42407876 | MS.gene78719:CDS |
| CCTGGTGTTGTTCTTGCTTT+TGG | 0.208005 | 5.4:-42407895 | MS.gene78719:CDS |
| AAGTCTTTGGCCAAGGAAAA+TGG | 0.232514 | 5.4:+42408128 | None:intergenic |
| CTCCTGAATATTGGCTTATA+TGG | 0.234852 | 5.4:-42406264 | MS.gene78719:CDS |
| TGGTGCTTTGTCTTATCTTT+GGG | 0.266282 | 5.4:-42407875 | MS.gene78719:CDS |
| CGAGCAACACAACAGGATTA+TGG | 0.267381 | 5.4:-42404413 | MS.gene78719:CDS |
| GGTTGTTTAGACCCACTTTC+AGG | 0.267666 | 5.4:-42407795 | MS.gene78719:CDS |
| AGGGTTTGATTCTAAGTCTT+TGG | 0.275538 | 5.4:+42408115 | None:intergenic |
| GCCTTTGCCTTGCTTTATAT+CGG | 0.279262 | 5.4:+42404528 | None:intergenic |
| TTGTGCACCAGCCTTCTTCT+TGG | 0.291467 | 5.4:+42403868 | None:intergenic |
| AATATGGTGCTGTAGAAATT+TGG | 0.292645 | 5.4:-42406492 | MS.gene78719:CDS |
| ATTGACGGTTGAATTGTATA+AGG | 0.298216 | 5.4:+42404684 | None:intergenic |
| CTTTGTGACTCCAATTCCTT+TGG | 0.309079 | 5.4:+42408179 | None:intergenic |
| CAGGTCGAAACATTGATTCT+TGG | 0.309965 | 5.4:-42405810 | MS.gene78719:CDS |
| TTGAAGAAGGCGACTGAATA+TGG | 0.312551 | 5.4:-42406508 | MS.gene78719:CDS |
| TACAACTTTCATTCCTCTCT+TGG | 0.323203 | 5.4:+42403731 | None:intergenic |
| AAGAGACTACCAACATTATA+TGG | 0.329901 | 5.4:+42406190 | None:intergenic |
| CATTCCTAAAGAGTTTCTTT+TGG | 0.331479 | 5.4:-42405480 | MS.gene78719:CDS |
| GGATCCAAAAGAAACTCTTT+AGG | 0.332998 | 5.4:+42405476 | None:intergenic |
| TGGTGGTGGTTCATTGTTTG+AGG | 0.346610 | 5.4:+42408095 | None:intergenic |
| TGTGCACCAGCCTTCTTCTT+GGG | 0.348907 | 5.4:+42403869 | None:intergenic |
| CAAGTGGATTATTCAGCTTA+TGG | 0.349059 | 5.4:-42404381 | MS.gene78719:CDS |
| CAAAGAAGACTCCTGAATAT+TGG | 0.362523 | 5.4:-42406273 | MS.gene78719:CDS |
| CTGCACTCTCTCCAGTCTTA+TGG | 0.363671 | 5.4:-42405228 | MS.gene78719:CDS |
| ATTCAGCTTATGGCAAAATC+AGG | 0.382255 | 5.4:-42404371 | MS.gene78719:CDS |
| ACATTCAAAATAATTGATCT+TGG | 0.382791 | 5.4:-42405536 | MS.gene78719:CDS |
| CTCCATATAAGCCAATATTC+AGG | 0.386303 | 5.4:+42406262 | None:intergenic |
| TTGGATTTAGATGGCGGAAT+AGG | 0.392942 | 5.4:-42404575 | MS.gene78719:CDS |
| CAACACCAACACCTACAAAA+AGG | 0.400926 | 5.4:+42408001 | None:intergenic |
| ACTGTTGCAACCAAAGGAAT+TGG | 0.403712 | 5.4:-42408189 | MS.gene78719:CDS |
| TTTGAGCTGTTGGATTTAGA+TGG | 0.405059 | 5.4:-42404584 | MS.gene78719:CDS |
| AAGCCTTCTTTGTCAAAGTA+AGG | 0.405199 | 5.4:+42404479 | None:intergenic |
| CTTTGACAAAGAAGGCTTGT+TGG | 0.405734 | 5.4:-42404474 | MS.gene78719:CDS |
| GCTACACCTGGTGTTGCTCC+TGG | 0.415742 | 5.4:-42407853 | MS.gene78719:CDS |
| CATCCTTACTTTGACAAAGA+AGG | 0.421240 | 5.4:-42404482 | MS.gene78719:CDS |
| GGTGGTGGTTCATTGTTTGA+GGG | 0.422407 | 5.4:+42408096 | None:intergenic |
| ACAACTTTCATTCCTCTCTT+GGG | 0.423424 | 5.4:+42403732 | None:intergenic |
| GGAGAGAGTGCAGTTGCAAC+TGG | 0.425506 | 5.4:+42405238 | None:intergenic |
| TCTTATCTTTGGGCTACACC+TGG | 0.433977 | 5.4:-42407865 | MS.gene78719:CDS |
| ATCACCACAAAAGCCATTCA+TGG | 0.434279 | 5.4:-42408054 | MS.gene78719:CDS |
| TAGGAGAGGCTTTGAGCTGT+TGG | 0.438205 | 5.4:-42404594 | MS.gene78719:CDS |
| TGGCTTATATGGAGGTTTGA+AGG | 0.443769 | 5.4:-42406253 | MS.gene78719:CDS |
| AGTCACACCTCTTTAATTGA+CGG | 0.447260 | 5.4:+42404669 | None:intergenic |
| GGCTTGAATGTTACTGTCCC+TGG | 0.447608 | 5.4:-42407913 | MS.gene78719:CDS |
| GGCTTATATGGAGGTTTGAA+GGG | 0.452837 | 5.4:-42406252 | MS.gene78719:CDS |
| ATTTAGATGGCGGAATAGGA+TGG | 0.466045 | 5.4:-42404571 | MS.gene78719:CDS |
| CTCAACTGGTATTGTGCATA+GGG | 0.466971 | 5.4:-42405694 | MS.gene78719:CDS |
| CTATTATCAGAGCGTAAGCC+AGG | 0.468233 | 5.4:+42404707 | None:intergenic |
| TTAGACGGTCTTCACTCAAC+TGG | 0.479359 | 5.4:-42405708 | MS.gene78719:CDS |
| GGCAAAATCAGGAACAGAAA+AGG | 0.483650 | 5.4:-42404360 | MS.gene78719:CDS |
| AAAGCATTTGGTGGAGGAGA+TGG | 0.488211 | 5.4:-42403757 | MS.gene78719:CDS |
| TTGACAAACCTTCCTGAAAG+TGG | 0.489331 | 5.4:+42407783 | None:intergenic |
| CTTGCACTGCATGGTGGTGG+TGG | 0.491350 | 5.4:+42408081 | None:intergenic |
| AATAATAATACCTTTGAAGA+GGG | 0.497156 | 5.4:+42406902 | None:intergenic |
| AATCCATTCAGCACCATGAA+TGG | 0.498174 | 5.4:+42408041 | None:intergenic |
| CTCGATGTGGCGCTGAACTT+AGG | 0.499449 | 5.4:-42404613 | MS.gene78719:CDS |
| GGAAATTGTGCCCAAGAAGA+AGG | 0.504841 | 5.4:-42403879 | MS.gene78719:CDS |
| CTGAATATTGGCTTATATGG+AGG | 0.508004 | 5.4:-42406261 | MS.gene78719:CDS |
| CCAAAAGCAAGAACAACACC+AGG | 0.508205 | 5.4:+42407895 | None:intergenic |
| AAGCCATTCATGGTGCTGAA+TGG | 0.509311 | 5.4:-42408044 | MS.gene78719:CDS |
| ACTCAACTGGTATTGTGCAT+AGG | 0.510063 | 5.4:-42405695 | MS.gene78719:CDS |
| TGGTCTAATATTCCTCCAAA+TGG | 0.512216 | 5.4:-42405065 | MS.gene78719:intron |
| AATTCCTTTGGTTGCAACAG+TGG | 0.512321 | 5.4:+42408191 | None:intergenic |
| AGTTTAACCTGCCATAAGAC+TGG | 0.523445 | 5.4:+42405217 | None:intergenic |
| GTGCTCATAATGTACTGCTC+TGG | 0.529003 | 5.4:+42405286 | None:intergenic |
| ACATTCAAGCCACTAGACTT+AGG | 0.534526 | 5.4:+42407925 | None:intergenic |
| AATTCAACCGTCAATTAAAG+AGG | 0.535042 | 5.4:-42404676 | MS.gene78719:CDS |
| CTGTAGATATCAAATCTGTC+AGG | 0.543319 | 5.4:+42405091 | None:intergenic |
| AATCTTGCACTGCATGGTGG+TGG | 0.543569 | 5.4:+42408078 | None:intergenic |
| TGATTCTAAGTCTTTGGCCA+AGG | 0.549378 | 5.4:+42408121 | None:intergenic |
| CAACTCTTGTTCGCATTAGA+CGG | 0.553953 | 5.4:-42405723 | MS.gene78719:CDS |
| CTTCAGCTCTTAAAGTGCAA+AGG | 0.564633 | 5.4:-42403832 | MS.gene78719:CDS |
| ATTCACTGAAGCTCAACTAC+AGG | 0.570689 | 5.4:-42404330 | MS.gene78719:CDS |
| ACTCTCTCCAGTCTTATGGC+AGG | 0.570820 | 5.4:-42405224 | MS.gene78719:intron |
| CCACACTCCATCACAGTGCA+TGG | 0.571570 | 5.4:+42407973 | None:intergenic |
| ATTTGATACTCACCATTTGG+AGG | 0.574767 | 5.4:+42405053 | None:intergenic |
| ACTGGAGCTGAGGGTGCAGA+TGG | 0.578510 | 5.4:+42405256 | None:intergenic |
| AGATTTGATATCTACAGTAC+TGG | 0.579644 | 5.4:-42405085 | MS.gene78719:CDS |
| ATTGTGCCCAAGAAGAAGGC+TGG | 0.580227 | 5.4:-42403875 | MS.gene78719:CDS |
| TTTAGATGGCGGAATAGGAT+GGG | 0.582248 | 5.4:-42404570 | MS.gene78719:CDS |
| AAAACAGGAAAAGCATTTGG+TGG | 0.582619 | 5.4:-42403766 | MS.gene78719:CDS |
| GAGCTGTTGGATTTAGATGG+CGG | 0.583483 | 5.4:-42404581 | MS.gene78719:CDS |
| ACAGGAAAAGCATTTGGTGG+AGG | 0.584401 | 5.4:-42403763 | MS.gene78719:CDS |
| CGAAACATTGATTCTTGGCG+AGG | 0.584582 | 5.4:-42405805 | MS.gene78719:CDS |
| TGGGCTTCCATGCACTGTGA+TGG | 0.585692 | 5.4:-42407980 | MS.gene78719:CDS |
| GTGATGAATCTTGCACTGCA+TGG | 0.588583 | 5.4:+42408072 | None:intergenic |
| ATGGCCACTGTTGCAACCAA+AGG | 0.589790 | 5.4:-42408195 | MS.gene78719:CDS |
| TGACAAACCTTCCTGAAAGT+GGG | 0.590710 | 5.4:+42407784 | None:intergenic |
| GTGACTATGACTTGGTTGCA+TGG | 0.590726 | 5.4:-42404652 | MS.gene78719:CDS |
| TGCAGTTGCAACTGGAGCTG+AGG | 0.594722 | 5.4:+42405246 | None:intergenic |
| CAATAATAATACCTTTGAAG+AGG | 0.595715 | 5.4:+42406901 | None:intergenic |
| AGGTGACTTAGTCTTGAAGA+AGG | 0.596316 | 5.4:-42406521 | MS.gene78719:CDS |
| CATAAGCTGAATAATCCACT+TGG | 0.599152 | 5.4:+42404382 | None:intergenic |
| GCTTATATGGAGGTTTGAAG+GGG | 0.600363 | 5.4:-42406251 | MS.gene78719:CDS |
| ACTCTGCAATAGATCAGCTA+AGG | 0.600527 | 5.4:+42406222 | None:intergenic |
| AGCACTCTTCCTAAGTCTAG+TGG | 0.608042 | 5.4:-42407934 | MS.gene78719:CDS |
| CCATGCACTGTGATGGAGTG+TGG | 0.608377 | 5.4:-42407973 | MS.gene78719:CDS |
| AAAATCAGGAACAGAAAAGG+AGG | 0.609977 | 5.4:-42404357 | MS.gene78719:CDS |
| GCTGCTACAGACTTGCGAGT+TGG | 0.612827 | 5.4:-42405512 | MS.gene78719:CDS |
| GTTTAGACCCACTTTCAGGA+AGG | 0.613422 | 5.4:-42407791 | MS.gene78719:intron |
| CAATGGTCCGATATAAAGCA+AGG | 0.622058 | 5.4:-42404535 | MS.gene78719:CDS |
| TCCGATATAAAGCAAGGCAA+AGG | 0.623569 | 5.4:-42404529 | MS.gene78719:CDS |
| TATCTATCATGCAAAATCTG+AGG | 0.626573 | 5.4:-42404448 | MS.gene78719:CDS |
| GCAGTTGCAACTGGAGCTGA+GGG | 0.634177 | 5.4:+42405247 | None:intergenic |
| TCAGGAACAGAAAAGGAGGG+TGG | 0.634221 | 5.4:-42404353 | MS.gene78719:CDS |
| TCAGAGAAAATAATGTTCTG+CGG | 0.642515 | 5.4:+42405663 | None:intergenic |
| CAAAAGCAAGAACAACACCA+GGG | 0.646990 | 5.4:+42407896 | None:intergenic |
| GAGGAGATGGATCCCAAGAG+AGG | 0.662184 | 5.4:-42403744 | MS.gene78719:CDS |
| AAAGAGGTGTGACTATGACT+TGG | 0.672074 | 5.4:-42404660 | MS.gene78719:CDS |
| ATGAATCTTGCACTGCATGG+TGG | 0.677136 | 5.4:+42408075 | None:intergenic |
| AAAACTGTGGAGCCTCGATG+TGG | 0.677269 | 5.4:-42404626 | MS.gene78719:CDS |
| TGTGGCGCTGAACTTAGGAG+AGG | 0.694905 | 5.4:-42404608 | MS.gene78719:CDS |
| AAATCAGGAACAGAAAAGGA+GGG | 0.696429 | 5.4:-42404356 | MS.gene78719:CDS |
| ATTATGGAGAAGCTGCCAAG+TGG | 0.696799 | 5.4:-42404397 | MS.gene78719:CDS |
| CTAAGTTCAGCGCCACATCG+AGG | 0.705406 | 5.4:+42404614 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATATATTATATTTAT+AGG | - | chr5.4:42405147-42405166 | MS.gene78719:intron | 0.0% |
| !! | TATTATTATTGTTATGAATA+TGG | - | chr5.4:42405045-42405064 | MS.gene78719:intron | 10.0% |
| !!! | AAACTTTGTTATAAAATTTA+AGG | + | chr5.4:42405817-42405836 | None:intergenic | 10.0% |
| !!! | AATCAAAAGAATTTTTTTAT+CGG | - | chr5.4:42407851-42407870 | MS.gene78719:CDS | 10.0% |
| !!! | ATTTTTATGAAATAGTATTT+CGG | - | chr5.4:42404889-42404908 | MS.gene78719:intron | 10.0% |
| !!! | TTAATTTTTTTTATTAACCA+TGG | - | chr5.4:42406361-42406380 | MS.gene78719:intron | 10.0% |
| !! | AAAAAAATTAAAGCATAACT+TGG | + | chr5.4:42406352-42406371 | None:intergenic | 15.0% |
| !! | AAATTTAAATAGAACTTTCT+CGG | + | chr5.4:42406034-42406053 | None:intergenic | 15.0% |
| !! | AATAGAATAGAGATAATTTA+TGG | - | chr5.4:42404799-42404818 | MS.gene78719:intron | 15.0% |
| !! | ATTATTTATAGATTCTCTTA+AGG | - | chr5.4:42405262-42405281 | MS.gene78719:CDS | 15.0% |
| !! | GAGAATCTATAAATAATTAA+TGG | + | chr5.4:42405259-42405278 | None:intergenic | 15.0% |
| !! | TCTGATACTATATTAAAATT+TGG | - | chr5.4:42404732-42404751 | MS.gene78719:intron | 15.0% |
| !! | TGATTAATAGATACATTATT+AGG | - | chr5.4:42406543-42406562 | MS.gene78719:intron | 15.0% |
| !!! | AAATAAACAAGTTTTGATTT+TGG | + | chr5.4:42407879-42407898 | None:intergenic | 15.0% |
| !!! | AAATAAGCAAATTTTCATTT+TGG | + | chr5.4:42407957-42407976 | None:intergenic | 15.0% |
| !!! | ATCAAAAGAATTTTTTTATC+GGG | - | chr5.4:42407852-42407871 | MS.gene78719:CDS | 15.0% |
| !!! | CAATTTTGATCATTTTATAT+AGG | - | chr5.4:42407199-42407218 | MS.gene78719:intron | 15.0% |
| !!! | GTAAACTATTTTAATGTTTT+TGG | - | chr5.4:42405173-42405192 | MS.gene78719:intron | 15.0% |
| !!! | TATGGATTGAAAATAATTTA+GGG | + | chr5.4:42404683-42404702 | None:intergenic | 15.0% |
| !!! | TTATGGATTGAAAATAATTT+AGG | + | chr5.4:42404684-42404703 | None:intergenic | 15.0% |
| !!! | TTTTGTAGTTAAAATGATTA+TGG | - | chr5.4:42407036-42407055 | MS.gene78719:intron | 15.0% |
| !!! | TTTTTATGAAATAGTATTTC+GGG | - | chr5.4:42404890-42404909 | MS.gene78719:intron | 15.0% |
| !! | AATCAATTATATGATCAAAC+TGG | - | chr5.4:42407160-42407179 | MS.gene78719:intron | 20.0% |
| !! | ACATTCAAAATAATTGATCT+TGG | - | chr5.4:42406398-42406417 | MS.gene78719:intron | 20.0% |
| !! | ACTCGATAAATTAAAAATGT+CGG | - | chr5.4:42405783-42405802 | MS.gene78719:CDS | 20.0% |
| !! | ATTTCCATGATTAGAAATAT+AGG | + | chr5.4:42407113-42407132 | None:intergenic | 20.0% |
| !!! | AATAATAATACCTTTGAAGA+GGG | + | chr5.4:42405035-42405054 | None:intergenic | 20.0% |
| !!! | ACTGAAATTATTTTTTTTGC+TGG | - | chr5.4:42407649-42407668 | MS.gene78719:intron | 20.0% |
| !!! | ATTTAAATTTTATGCTTCCT+TGG | - | chr5.4:42406044-42406063 | MS.gene78719:intron | 20.0% |
| !!! | TCAAAACTTGTTTATTTTAG+TGG | - | chr5.4:42407882-42407901 | MS.gene78719:CDS | 20.0% |
| !!! | TTATGACTTATGATACTTTT+TGG | - | chr5.4:42405375-42405394 | MS.gene78719:intron | 20.0% |
| !!! | TTATTTTTACTAGCTTATAG+AGG | + | chr5.4:42404550-42404569 | None:intergenic | 20.0% |
| ! | AAAAGGGTTAAATATGTTTC+TGG | + | chr5.4:42407909-42407928 | None:intergenic | 25.0% |
| ! | AAATTTAGTGACGAAATTGA+AGG | - | chr5.4:42404841-42404860 | MS.gene78719:intron | 25.0% |
| ! | AAGACTGATAATTAATTCAC+TGG | + | chr5.4:42405845-42405864 | None:intergenic | 25.0% |
| ! | AAGCTATAAACTCAAATTTG+TGG | - | chr5.4:42404634-42404653 | MS.gene78719:CDS | 25.0% |
| ! | ACAAACATATCAAAAAAACC+AGG | + | chr5.4:42404102-42404121 | None:intergenic | 25.0% |
| ! | AGATAATTTATGGACCAAAT+AGG | - | chr5.4:42404809-42404828 | MS.gene78719:intron | 25.0% |
| ! | AGCTCATCAAACAATTTATT+AGG | + | chr5.4:42404232-42404251 | None:intergenic | 25.0% |
| ! | ATAGTGACTATGACAATAAA+AGG | + | chr5.4:42407926-42407945 | None:intergenic | 25.0% |
| ! | ATTATTTGATACTCACCATT+TGG | + | chr5.4:42406887-42406906 | None:intergenic | 25.0% |
| ! | CATGGAAATCATTTAAACAA+TGG | - | chr5.4:42407124-42407143 | MS.gene78719:intron | 25.0% |
| ! | TAGTGACTATGACAATAAAA+GGG | + | chr5.4:42407925-42407944 | None:intergenic | 25.0% |
| ! | TGGTTATTTATGATCTCTAA+AGG | - | chr5.4:42406064-42406083 | MS.gene78719:intron | 25.0% |
| ! | TTAGAGATCATAAATAACCA+AGG | + | chr5.4:42406064-42406083 | None:intergenic | 25.0% |
| !! | AAATAATTTAGGGCCTATTT+AGG | + | chr5.4:42404673-42404692 | None:intergenic | 25.0% |
| !! | AACAAAAAATCCATTTTCCT+TGG | - | chr5.4:42403796-42403815 | MS.gene78719:CDS | 25.0% |
| !! | AATTTTCACTCTTTCCTATT+TGG | + | chr5.4:42404826-42404845 | None:intergenic | 25.0% |
| !! | ACATGTGCTATTATTAATGA+TGG | + | chr5.4:42406758-42406777 | None:intergenic | 25.0% |
| !! | AGAGATTTTCCATATAATGT+TGG | - | chr5.4:42405735-42405754 | MS.gene78719:CDS | 25.0% |
| !! | CAATAATAATACCTTTGAAG+AGG | + | chr5.4:42405036-42405055 | None:intergenic | 25.0% |
| !! | GTTTCCTATATTTCTAATCA+TGG | - | chr5.4:42407106-42407125 | MS.gene78719:intron | 25.0% |
| !!! | AAGGAAAATGGATTTTTTGT+TGG | + | chr5.4:42403797-42403816 | None:intergenic | 25.0% |
| !!! | AGGAAAATGGATTTTTTGTT+GGG | + | chr5.4:42403796-42403815 | None:intergenic | 25.0% |
| !!! | TTTTGTTTATGGTTTTCTTG+AGG | - | chr5.4:42405509-42405528 | MS.gene78719:CDS | 25.0% |
| AAAAACCTTAAACGAGAGTA+TGG | - | chr5.4:42408133-42408152 | MS.gene78719:CDS | 30.0% | |
| AAAAGGGTTGAATATGTTTG+TGG | + | chr5.4:42407987-42408006 | None:intergenic | 30.0% | |
| AAAATGAAGAACCAACTTGT+GGG | - | chr5.4:42405298-42405317 | MS.gene78719:CDS | 30.0% | |
| AACAACTATGAGGGAAAAAA+GGG | + | chr5.4:42408003-42408022 | None:intergenic | 30.0% | |
| AAGAGACTACCAACATTATA+TGG | + | chr5.4:42405747-42405766 | None:intergenic | 30.0% | |
| AATTCAACCGTCAATTAAAG+AGG | - | chr5.4:42407258-42407277 | MS.gene78719:intron | 30.0% | |
| AGATTTGATATCTACAGTAC+TGG | - | chr5.4:42406849-42406868 | MS.gene78719:intron | 30.0% | |
| AGCCTCTTGTATAAAAAACA+GGG | + | chr5.4:42407747-42407766 | None:intergenic | 30.0% | |
| ATTGACGGTTGAATTGTATA+AGG | + | chr5.4:42407253-42407272 | None:intergenic | 30.0% | |
| ATTGTCATAGTCACTATCTT+AGG | - | chr5.4:42407929-42407948 | MS.gene78719:CDS | 30.0% | |
| CTTGCAAATAGATCCTAAAT+AGG | - | chr5.4:42404657-42404676 | MS.gene78719:CDS | 30.0% | |
| GTATCTAAAGAAATGACATG+TGG | + | chr5.4:42407690-42407709 | None:intergenic | 30.0% | |
| TAAAATGAAGAACCAACTTG+TGG | - | chr5.4:42405297-42405316 | MS.gene78719:CDS | 30.0% | |
| TAAACACAAACTTTGATCAG+TGG | + | chr5.4:42406514-42406533 | None:intergenic | 30.0% | |
| TAAGCGTGAAATAAGTGTTT+CGG | + | chr5.4:42405989-42406008 | None:intergenic | 30.0% | |
| TATAAAGTCATGAGAAAGTG+CGG | - | chr5.4:42404572-42404591 | MS.gene78719:CDS | 30.0% | |
| TATCTATCATGCAAAATCTG+AGG | - | chr5.4:42407486-42407505 | MS.gene78719:intron | 30.0% | |
| TCAGAGAAAATAATGTTCTG+CGG | + | chr5.4:42406274-42406293 | None:intergenic | 30.0% | |
| TGTGTTTGTGAAATTTCAGT+TGG | - | chr5.4:42405328-42405347 | MS.gene78719:intron | 30.0% | |
| TTCTTAGATATGATGAAGTC+AGG | - | chr5.4:42405082-42405101 | MS.gene78719:CDS | 30.0% | |
| TTGCTGAGAATGGTTTATTA+TGG | - | chr5.4:42404931-42404950 | MS.gene78719:intron | 30.0% | |
| TTGTCATAGTCACTATCTTA+GGG | - | chr5.4:42407930-42407949 | MS.gene78719:CDS | 30.0% | |
| ! | ATGTTTCGACCTGAAATTTT+TGG | + | chr5.4:42406117-42406136 | None:intergenic | 30.0% |
| ! | ATTTTCATCCCTCCAAAAAT+AGG | + | chr5.4:42407834-42407853 | None:intergenic | 30.0% |
| ! | CAGAACATTATTTTCTCTGA+AGG | - | chr5.4:42406274-42406293 | MS.gene78719:CDS | 30.0% |
| ! | CATTCCTAAAGAGTTTCTTT+TGG | - | chr5.4:42406454-42406473 | MS.gene78719:CDS | 30.0% |
| ! | CATTTTATATAGGCATTTCC+TGG | - | chr5.4:42407209-42407228 | MS.gene78719:intron | 30.0% |
| ! | GTGCTATTATTAATGATGGA+TGG | + | chr5.4:42406754-42406773 | None:intergenic | 30.0% |
| ! | TCTTATAAGCTAGCTTATAG+TGG | - | chr5.4:42404295-42404314 | MS.gene78719:intron | 30.0% |
| ! | TTCTTGAGGTAAGGATTTTT+GGG | - | chr5.4:42405523-42405542 | MS.gene78719:CDS | 30.0% |
| ! | TTGTCATTTACTATTTGCAG+AGG | - | chr5.4:42405634-42405653 | MS.gene78719:intron | 30.0% |
| ! | TTTATGGTTTTCTTGAGGTA+AGG | - | chr5.4:42405514-42405533 | MS.gene78719:CDS | 30.0% |
| ! | TTTCTTGAGGTAAGGATTTT+TGG | - | chr5.4:42405522-42405541 | MS.gene78719:CDS | 30.0% |
| ! | TTTTATTAACCATGGTCTCA+GGG | - | chr5.4:42406369-42406388 | MS.gene78719:intron | 30.0% |
| ! | TTTTCATCCCTCCAAAAATA+GGG | + | chr5.4:42407833-42407852 | None:intergenic | 30.0% |
| ! | TTTTTATTAACCATGGTCTC+AGG | - | chr5.4:42406368-42406387 | MS.gene78719:intron | 30.0% |
| !! | AATATGGTGCTGTAGAAATT+TGG | - | chr5.4:42405442-42405461 | MS.gene78719:intron | 30.0% |
| !! | AGCAAGAAATGATGGATAAA+TGG | + | chr5.4:42408030-42408049 | None:intergenic | 30.0% |
| !! | CTATTTGTTATTGCTGAGAA+TGG | - | chr5.4:42404921-42404940 | MS.gene78719:intron | 30.0% |
| !! | TACTAGCTTATAGAGGTTTT+TGG | + | chr5.4:42404543-42404562 | None:intergenic | 30.0% |
| !! | TTGTTCTTGCTTTTGTTGAA+AGG | - | chr5.4:42404118-42404137 | MS.gene78719:intron | 30.0% |
| !! | TTTTTCAATTAGGGCTACAA+AGG | - | chr5.4:42404468-42404487 | MS.gene78719:CDS | 30.0% |
| !!! | GGAAAATGGATTTTTTGTTG+GGG | + | chr5.4:42403795-42403814 | None:intergenic | 30.0% |
| !!! | TGATACTTTTTGGTTCTCAT+TGG | - | chr5.4:42405385-42405404 | MS.gene78719:intron | 30.0% |
| AAAATCAGGAACAGAAAAGG+AGG | - | chr5.4:42407577-42407596 | MS.gene78719:intron | 35.0% | |
| AAAGTCATCTGAAGATACCT+TGG | + | chr5.4:42406482-42406501 | None:intergenic | 35.0% | |
| AAAGTTGTTACGTGACTGAA+AGG | + | chr5.4:42407793-42407812 | None:intergenic | 35.0% | |
| AAATCAGGAACAGAAAAGGA+GGG | - | chr5.4:42407578-42407597 | MS.gene78719:intron | 35.0% | |
| AAGCCTTCTTTGTCAAAGTA+AGG | + | chr5.4:42407458-42407477 | None:intergenic | 35.0% | |
| AAGGATTGTACACAACATGA+GGG | + | chr5.4:42406609-42406628 | None:intergenic | 35.0% | |
| AGGGTTTGATTCTAAGTCTT+TGG | + | chr5.4:42403822-42403841 | None:intergenic | 35.0% | |
| AGTCACACCTCTTTAATTGA+CGG | + | chr5.4:42407268-42407287 | None:intergenic | 35.0% | |
| ATTCAGCTTATGGCAAAATC+AGG | - | chr5.4:42407563-42407582 | MS.gene78719:intron | 35.0% | |
| ATTTGATACTCACCATTTGG+AGG | + | chr5.4:42406884-42406903 | None:intergenic | 35.0% | |
| CAAAGAAGACTCCTGAATAT+TGG | - | chr5.4:42405661-42405680 | MS.gene78719:CDS | 35.0% | |
| CAACAACTATGAGGGAAAAA+AGG | + | chr5.4:42408004-42408023 | None:intergenic | 35.0% | |
| CAGCCTCTTGTATAAAAAAC+AGG | + | chr5.4:42407748-42407767 | None:intergenic | 35.0% | |
| CATAAGCTGAATAATCCACT+TGG | + | chr5.4:42407555-42407574 | None:intergenic | 35.0% | |
| CATCCTTACTTTGACAAAGA+AGG | - | chr5.4:42407452-42407471 | MS.gene78719:intron | 35.0% | |
| CTCCATATAAGCCAATATTC+AGG | + | chr5.4:42405675-42405694 | None:intergenic | 35.0% | |
| CTGTAGATATCAAATCTGTC+AGG | + | chr5.4:42406846-42406865 | None:intergenic | 35.0% | |
| CTTGTATAAAAAACAGGGTG+AGG | + | chr5.4:42407742-42407761 | None:intergenic | 35.0% | |
| CTTTCTAACTTGAGTCATCA+AGG | + | chr5.4:42406571-42406590 | None:intergenic | 35.0% | |
| GGATCCAAAAGAAACTCTTT+AGG | + | chr5.4:42406461-42406480 | None:intergenic | 35.0% | |
| GTATCACTGTCTTACTTGTT+TGG | - | chr5.4:42405546-42405565 | MS.gene78719:CDS | 35.0% | |
| TACTTGTTTGGAGAAATCGA+AGG | - | chr5.4:42405558-42405577 | MS.gene78719:intron | 35.0% | |
| TCCATCATTTCTTGCTTTGT+AGG | - | chr5.4:42408034-42408053 | MS.gene78719:CDS | 35.0% | |
| TCCTACAAAGCAAGAAATGA+TGG | + | chr5.4:42408038-42408057 | None:intergenic | 35.0% | |
| TGAGAATGGTTTATTATGGC+AGG | - | chr5.4:42404935-42404954 | MS.gene78719:intron | 35.0% | |
| TGGTCTAATATTCCTCCAAA+TGG | - | chr5.4:42406869-42406888 | MS.gene78719:intron | 35.0% | |
| TGGTGCTTTGTCTTATCTTT+GGG | - | chr5.4:42404059-42404078 | MS.gene78719:intron | 35.0% | |
| TGTCATAGTCACTATCTTAG+GGG | - | chr5.4:42407931-42407950 | MS.gene78719:CDS | 35.0% | |
| TTATCAGTCTTTCATCTGTG+AGG | - | chr5.4:42405854-42405873 | MS.gene78719:intron | 35.0% | |
| TTTGAGCTGTTGGATTTAGA+TGG | - | chr5.4:42407350-42407369 | MS.gene78719:intron | 35.0% | |
| ! | AAATGGTGTCAACAACTATG+AGG | + | chr5.4:42408013-42408032 | None:intergenic | 35.0% |
| ! | AAGAGTTTCTTTTGGATCCA+AGG | - | chr5.4:42406462-42406481 | MS.gene78719:CDS | 35.0% |
| ! | AATGGTGTCAACAACTATGA+GGG | + | chr5.4:42408012-42408031 | None:intergenic | 35.0% |
| ! | ACAAGATTTTCCAAAGGGAT+TGG | - | chr5.4:42406153-42406172 | MS.gene78719:intron | 35.0% |
| ! | ATAAAGTCATGAGAAAGTGC+GGG | - | chr5.4:42404573-42404592 | MS.gene78719:CDS | 35.0% |
| ! | GAGGTACAAGATTTTCCAAA+GGG | - | chr5.4:42406148-42406167 | MS.gene78719:intron | 35.0% |
| ! | GTTTATCAAGCCTGTTTTGT+CGG | + | chr5.4:42404775-42404794 | None:intergenic | 35.0% |
| ! | TCTTGAGGTAAGGATTTTTG+GGG | - | chr5.4:42405524-42405543 | MS.gene78719:CDS | 35.0% |
| ! | TGTGAAATTTCAGTTGGTCT+TGG | - | chr5.4:42405334-42405353 | MS.gene78719:intron | 35.0% |
| ! | TTGGTGCTTTGTCTTATCTT+TGG | - | chr5.4:42404058-42404077 | MS.gene78719:intron | 35.0% |
| ! | TTTTCTCTTTCCAATCCCTT+TGG | + | chr5.4:42406166-42406185 | None:intergenic | 35.0% |
| !! | AAAACAGGAAAAGCATTTGG+TGG | - | chr5.4:42408168-42408187 | MS.gene78719:CDS | 35.0% |
| !! | AGCTGTGCAGATTTTGTTTA+TGG | - | chr5.4:42405498-42405517 | MS.gene78719:CDS | 35.0% |
| !! | CAAGTGGATTATTCAGCTTA+TGG | - | chr5.4:42407553-42407572 | MS.gene78719:intron | 35.0% |
| !! | CTCCTGAATATTGGCTTATA+TGG | - | chr5.4:42405670-42405689 | MS.gene78719:CDS | 35.0% |
| !! | CTGAATATTGGCTTATATGG+AGG | - | chr5.4:42405673-42405692 | MS.gene78719:CDS | 35.0% |
| !! | GCAAAAACAGGAAAAGCATT+TGG | - | chr5.4:42408165-42408184 | MS.gene78719:CDS | 35.0% |
| !! | GTGAAATTTCAGTTGGTCTT+GGG | - | chr5.4:42405335-42405354 | MS.gene78719:intron | 35.0% |
| !!! | ACTTTTTGGTTCTCATTGGA+AGG | - | chr5.4:42405389-42405408 | MS.gene78719:intron | 35.0% |
| !!! | CACCCTGTTTTTTATACAAG+AGG | - | chr5.4:42407742-42407761 | MS.gene78719:intron | 35.0% |
| !!! | GATTTTTTGTTGGGGTTGTA+GGG | + | chr5.4:42403787-42403806 | None:intergenic | 35.0% |
| !!! | GGCAGGATGATTTTGTTTTA+GGG | - | chr5.4:42404952-42404971 | MS.gene78719:intron | 35.0% |
| !!! | TGGCAGGATGATTTTGTTTT+AGG | - | chr5.4:42404951-42404970 | MS.gene78719:intron | 35.0% |
| !!! | TTTGTTTTAGGGAAGAAGCT+GGG | - | chr5.4:42404963-42404982 | MS.gene78719:intron | 35.0% |
| !!! | TTTTGTTTTAGGGAAGAAGC+TGG | - | chr5.4:42404962-42404981 | MS.gene78719:intron | 35.0% |
| !!! | TTTTTGTAGGTGTTGGTGTT+GGG | - | chr5.4:42403935-42403954 | MS.gene78719:intron | 35.0% |
| AAGTCTTTGGCCAAGGAAAA+TGG | + | chr5.4:42403809-42403828 | None:intergenic | 40.0% | |
| AATCCATTCAGCACCATGAA+TGG | + | chr5.4:42403896-42403915 | None:intergenic | 40.0% | |
| AATTCCTTTGGTTGCAACAG+TGG | + | chr5.4:42403746-42403765 | None:intergenic | 40.0% | |
| ACATTCAAGCCACTAGACTT+AGG | + | chr5.4:42404012-42404031 | None:intergenic | 40.0% | |
| ACTCAACTGGTATTGTGCAT+AGG | - | chr5.4:42406239-42406258 | MS.gene78719:CDS | 40.0% | |
| ACTCTGCAATAGATCAGCTA+AGG | + | chr5.4:42405715-42405734 | None:intergenic | 40.0% | |
| ACTGTTGCAACCAAAGGAAT+TGG | - | chr5.4:42403745-42403764 | MS.gene78719:CDS | 40.0% | |
| AGTTTAACCTGCCATAAGAC+TGG | + | chr5.4:42406720-42406739 | None:intergenic | 40.0% | |
| ATCACCACAAAAGCCATTCA+TGG | - | chr5.4:42403880-42403899 | MS.gene78719:CDS | 40.0% | |
| ATTCACTGAAGCTCAACTAC+AGG | - | chr5.4:42407604-42407623 | MS.gene78719:intron | 40.0% | |
| CAAAAGCAAGAACAACACCA+GGG | + | chr5.4:42404041-42404060 | None:intergenic | 40.0% | |
| CAAACTTTGATCAGTGGAGT+AGG | + | chr5.4:42406508-42406527 | None:intergenic | 40.0% | |
| CAACACCAACACCTACAAAA+AGG | + | chr5.4:42403936-42403955 | None:intergenic | 40.0% | |
| CAACTCTTGTTCGCATTAGA+CGG | - | chr5.4:42406211-42406230 | MS.gene78719:CDS | 40.0% | |
| CAATGGTCCGATATAAAGCA+AGG | - | chr5.4:42407399-42407418 | MS.gene78719:intron | 40.0% | |
| CTCAACTGGTATTGTGCATA+GGG | - | chr5.4:42406240-42406259 | MS.gene78719:CDS | 40.0% | |
| CTCATCCATACTCTCGTTTA+AGG | + | chr5.4:42408141-42408160 | None:intergenic | 40.0% | |
| CTTCAGCTCTTAAAGTGCAA+AGG | - | chr5.4:42408102-42408121 | MS.gene78719:CDS | 40.0% | |
| CTTTGACAAAGAAGGCTTGT+TGG | - | chr5.4:42407460-42407479 | MS.gene78719:intron | 40.0% | |
| CTTTGTGACTCCAATTCCTT+TGG | + | chr5.4:42403758-42403777 | None:intergenic | 40.0% | |
| GAAGGATTGTACACAACATG+AGG | + | chr5.4:42406610-42406629 | None:intergenic | 40.0% | |
| GCCTTTGCCTTGCTTTATAT+CGG | + | chr5.4:42407409-42407428 | None:intergenic | 40.0% | |
| GCTTATATGGAGGTTTGAAG+GGG | - | chr5.4:42405683-42405702 | MS.gene78719:CDS | 40.0% | |
| GGCAAAATCAGGAACAGAAA+AGG | - | chr5.4:42407574-42407593 | MS.gene78719:intron | 40.0% | |
| GGCTTATATGGAGGTTTGAA+GGG | - | chr5.4:42405682-42405701 | MS.gene78719:CDS | 40.0% | |
| TCCGATATAAAGCAAGGCAA+AGG | - | chr5.4:42407405-42407424 | MS.gene78719:intron | 40.0% | |
| TGACAAACCTTCCTGAAAGT+GGG | + | chr5.4:42404153-42404172 | None:intergenic | 40.0% | |
| TGATTCTAAGTCTTTGGCCA+AGG | + | chr5.4:42403816-42403835 | None:intergenic | 40.0% | |
| TGGCTTATATGGAGGTTTGA+AGG | - | chr5.4:42405681-42405700 | MS.gene78719:CDS | 40.0% | |
| TTGAAGAAGGCGACTGAATA+TGG | - | chr5.4:42405426-42405445 | MS.gene78719:intron | 40.0% | |
| TTGACAAACCTTCCTGAAAG+TGG | + | chr5.4:42404154-42404173 | None:intergenic | 40.0% | |
| ! | AAAGAGGTGTGACTATGACT+TGG | - | chr5.4:42407274-42407293 | MS.gene78719:intron | 40.0% |
| ! | ATGGGAACTTTTGACGTCAA+TGG | - | chr5.4:42407382-42407401 | MS.gene78719:intron | 40.0% |
| ! | CACAACCTTTTTGTAGGTGT+TGG | - | chr5.4:42403928-42403947 | MS.gene78719:intron | 40.0% |
| ! | CAGATTGAGCTTGAAGTGTT+TGG | - | chr5.4:42404375-42404394 | MS.gene78719:CDS | 40.0% |
| ! | CAGTCTTGTATTTGTCAACG+AGG | + | chr5.4:42407005-42407024 | None:intergenic | 40.0% |
| ! | CGAGGTACAAGATTTTCCAA+AGG | - | chr5.4:42406147-42406166 | MS.gene78719:intron | 40.0% |
| ! | GTGATGGTGCCAAAAATTTC+AGG | - | chr5.4:42406105-42406124 | MS.gene78719:intron | 40.0% |
| ! | TCAGCTCACAACCTTTTTGT+AGG | - | chr5.4:42403922-42403941 | MS.gene78719:intron | 40.0% |
| ! | TGCAGCATATCTGAAATGGA+AGG | + | chr5.4:42406628-42406647 | None:intergenic | 40.0% |
| ! | TTATACAAGAGGCTGTTTCC+AGG | - | chr5.4:42407753-42407772 | MS.gene78719:intron | 40.0% |
| !! | AGGTGACTTAGTCTTGAAGA+AGG | - | chr5.4:42405413-42405432 | MS.gene78719:intron | 40.0% |
| !! | ATTTAGATGGCGGAATAGGA+TGG | - | chr5.4:42407363-42407382 | MS.gene78719:intron | 40.0% |
| !! | CAGGTCGAAACATTGATTCT+TGG | - | chr5.4:42406124-42406143 | MS.gene78719:intron | 40.0% |
| !! | TACCTTTGAAGAGGGCTTTT+TGG | + | chr5.4:42405027-42405046 | None:intergenic | 40.0% |
| !! | TTGGATTTAGATGGCGGAAT+AGG | - | chr5.4:42407359-42407378 | MS.gene78719:intron | 40.0% |
| !! | TTTAGATGGCGGAATAGGAT+GGG | - | chr5.4:42407364-42407383 | MS.gene78719:intron | 40.0% |
| !! | TTTGGTTCTCATTGGAAGGA+AGG | - | chr5.4:42405393-42405412 | MS.gene78719:intron | 40.0% |
| !!! | AAATTTTTGGCACCATCACC+GGG | + | chr5.4:42406104-42406123 | None:intergenic | 40.0% |
| !!! | CTTTTTGTAGGTGTTGGTGT+TGG | - | chr5.4:42403934-42403953 | MS.gene78719:intron | 40.0% |
| !!! | GAAATTTTTGGCACCATCAC+CGG | + | chr5.4:42406105-42406124 | None:intergenic | 40.0% |
| !!! | GGATTTTTTGTTGGGGTTGT+AGG | + | chr5.4:42403788-42403807 | None:intergenic | 40.0% |
| !!! | GTTTTTTCGAGCAACACAAC+AGG | - | chr5.4:42407514-42407533 | MS.gene78719:intron | 40.0% |
| !!! | TTGTTTTAGGGAAGAAGCTG+GGG | - | chr5.4:42404964-42404983 | MS.gene78719:intron | 40.0% |
| AAAAAACCAGGAGCAACACC+AGG | + | chr5.4:42404090-42404109 | None:intergenic | 45.0% | |
| AGCACTCTTCCTAAGTCTAG+TGG | - | chr5.4:42404000-42404019 | MS.gene78719:intron | 45.0% | |
| AGCCAAAAAGCCCTCTTCAA+AGG | - | chr5.4:42405022-42405041 | MS.gene78719:intron | 45.0% | |
| ATGAAGTCAGGATACGAGCT+GGG | - | chr5.4:42405094-42405113 | MS.gene78719:CDS | 45.0% | |
| ATGAATCTTGCACTGCATGG+TGG | + | chr5.4:42403862-42403881 | None:intergenic | 45.0% | |
| ATTATGGAGAAGCTGCCAAG+TGG | - | chr5.4:42407537-42407556 | MS.gene78719:intron | 45.0% | |
| CACATGCTATACCCACAAGT+TGG | + | chr5.4:42405312-42405331 | None:intergenic | 45.0% | |
| CCAAAAGCAAGAACAACACC+AGG | + | chr5.4:42404042-42404061 | None:intergenic | 45.0% | |
| CGAGCAACACAACAGGATTA+TGG | - | chr5.4:42407521-42407540 | MS.gene78719:intron | 45.0% | |
| CTAACTTGAGCCGACAAAAC+AGG | - | chr5.4:42404762-42404781 | MS.gene78719:intron | 45.0% | |
| CTATTATCAGAGCGTAAGCC+AGG | + | chr5.4:42407230-42407249 | None:intergenic | 45.0% | |
| CTGGTGCAGCATATCTGAAA+TGG | + | chr5.4:42406632-42406651 | None:intergenic | 45.0% | |
| GAGCTGTTGGATTTAGATGG+CGG | - | chr5.4:42407353-42407372 | MS.gene78719:intron | 45.0% | |
| GGAAATTGTGCCCAAGAAGA+AGG | - | chr5.4:42408055-42408074 | MS.gene78719:CDS | 45.0% | |
| GGTTGCATGGAGAAAAACTG+TGG | - | chr5.4:42407295-42407314 | MS.gene78719:intron | 45.0% | |
| GGTTGTTTAGACCCACTTTC+AGG | - | chr5.4:42404139-42404158 | MS.gene78719:intron | 45.0% | |
| GTGATGAATCTTGCACTGCA+TGG | + | chr5.4:42403865-42403884 | None:intergenic | 45.0% | |
| GTGCTCATAATGTACTGCTC+TGG | + | chr5.4:42406651-42406670 | None:intergenic | 45.0% | |
| GTTACGTGACTGAAAGGTCA+CGG | + | chr5.4:42407787-42407806 | None:intergenic | 45.0% | |
| GTTTAGACCCACTTTCAGGA+AGG | - | chr5.4:42404143-42404162 | MS.gene78719:intron | 45.0% | |
| TCTTATCTTTGGGCTACACC+TGG | - | chr5.4:42404069-42404088 | MS.gene78719:intron | 45.0% | |
| TGGATGAGCTCAGCAAAAAC+AGG | - | chr5.4:42408153-42408172 | MS.gene78719:CDS | 45.0% | |
| TTACGTGACTGAAAGGTCAC+GGG | + | chr5.4:42407786-42407805 | None:intergenic | 45.0% | |
| TTAGACGGTCTTCACTCAAC+TGG | - | chr5.4:42406226-42406245 | MS.gene78719:CDS | 45.0% | |
| ! | AAAGCATTTGGTGGAGGAGA+TGG | - | chr5.4:42408177-42408196 | MS.gene78719:CDS | 45.0% |
| ! | AAGCCATTCATGGTGCTGAA+TGG | - | chr5.4:42403890-42403909 | MS.gene78719:intron | 45.0% |
| ! | AGCACCATGAATGGCTTTTG+TGG | + | chr5.4:42403887-42403906 | None:intergenic | 45.0% |
| ! | GGTGGTGGTTCATTGTTTGA+GGG | + | chr5.4:42403841-42403860 | None:intergenic | 45.0% |
| ! | TTTTGTTGGGGTTGTAGGGA+TGG | + | chr5.4:42403783-42403802 | None:intergenic | 45.0% |
| !! | ACAGGAAAAGCATTTGGTGG+AGG | - | chr5.4:42408171-42408190 | MS.gene78719:CDS | 45.0% |
| !! | CGAAACATTGATTCTTGGCG+AGG | - | chr5.4:42406129-42406148 | MS.gene78719:intron | 45.0% |
| !! | GTGACTATGACTTGGTTGCA+TGG | - | chr5.4:42407282-42407301 | MS.gene78719:intron | 45.0% |
| !! | TGGTGGTGGTTCATTGTTTG+AGG | + | chr5.4:42403842-42403861 | None:intergenic | 45.0% |
| !!! | AATTTTTGGCACCATCACCG+GGG | + | chr5.4:42406103-42406122 | None:intergenic | 45.0% |
| !!! | CAAGGCTCCCTATTTTTGGA+GGG | - | chr5.4:42407823-42407842 | MS.gene78719:CDS | 45.0% |
| !!! | CCTGGTGTTGTTCTTGCTTT+TGG | - | chr5.4:42404039-42404058 | MS.gene78719:intron | 45.0% |
| !!! | CTGTTTTGTCGGCTCAAGTT+AGG | + | chr5.4:42404764-42404783 | None:intergenic | 45.0% |
| !!! | TGTTTTAGGGAAGAAGCTGG+GGG | - | chr5.4:42404965-42404984 | MS.gene78719:intron | 45.0% |
| !!! | AATATTTATTTTTTTCAATT+AGG | - | chr5.4:42404458-42404477 | MS.gene78719:CDS | 5.0% |
| !!! | ATATTTATTTTTTTCAATTA+GGG | - | chr5.4:42404459-42404478 | MS.gene78719:CDS | 5.0% |
| AAAACTGTGGAGCCTCGATG+TGG | - | chr5.4:42407308-42407327 | MS.gene78719:intron | 50.0% | |
| AATCTTGCACTGCATGGTGG+TGG | + | chr5.4:42403859-42403878 | None:intergenic | 50.0% | |
| ACAACTTTACCGTTGCGCCA+AGG | - | chr5.4:42407805-42407824 | MS.gene78719:CDS | 50.0% | |
| ATGGCCACTGTTGCAACCAA+AGG | - | chr5.4:42403739-42403758 | MS.gene78719:CDS | 50.0% | |
| ATTGTGCCCAAGAAGAAGGC+TGG | - | chr5.4:42408059-42408078 | MS.gene78719:CDS | 50.0% | |
| CCTCCAAAAATAGGGAGCCT+TGG | + | chr5.4:42407825-42407844 | None:intergenic | 50.0% | |
| CTGCACTCTCTCCAGTCTTA+TGG | - | chr5.4:42406706-42406725 | MS.gene78719:intron | 50.0% | |
| GATGAAGTCAGGATACGAGC+TGG | - | chr5.4:42405093-42405112 | MS.gene78719:CDS | 50.0% | |
| GGCTTGAATGTTACTGTCCC+TGG | - | chr5.4:42404021-42404040 | MS.gene78719:intron | 50.0% | |
| TCAGGAACAGAAAAGGAGGG+TGG | - | chr5.4:42407581-42407600 | MS.gene78719:intron | 50.0% | |
| TGAAGTCAGGATACGAGCTG+GGG | - | chr5.4:42405095-42405114 | MS.gene78719:CDS | 50.0% | |
| TGTGCACCAGCCTTCTTCTT+GGG | + | chr5.4:42408068-42408087 | None:intergenic | 50.0% | |
| TTGTGCACCAGCCTTCTTCT+TGG | + | chr5.4:42408069-42408088 | None:intergenic | 50.0% | |
| TTTGCTGGACACTCGACAGA+TGG | - | chr5.4:42407664-42407683 | MS.gene78719:intron | 50.0% | |
| ! | ACTCTCTCCAGTCTTATGGC+AGG | - | chr5.4:42406710-42406729 | MS.gene78719:intron | 50.0% |
| !! | TAGGAGAGGCTTTGAGCTGT+TGG | - | chr5.4:42407340-42407359 | MS.gene78719:intron | 50.0% |
| !!! | CCAAGGCTCCCTATTTTTGG+AGG | - | chr5.4:42407822-42407841 | MS.gene78719:CDS | 50.0% |
| AAGCTGGGGGAGGGATCATT+TGG | - | chr5.4:42404978-42404997 | MS.gene78719:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr5.4:42407774-42407793 | None:intergenic | 55.0% | |
| AATAGGGAGCCTTGGCGCAA+CGG | + | chr5.4:42407817-42407836 | None:intergenic | 55.0% | |
| CAGAGCCTCGTTTCGACCAA+GGG | + | chr5.4:42404716-42404735 | None:intergenic | 55.0% | |
| CCACACTCCATCACAGTGCA+TGG | + | chr5.4:42403964-42403983 | None:intergenic | 55.0% | |
| CTAAGTTCAGCGCCACATCG+AGG | + | chr5.4:42407323-42407342 | None:intergenic | 55.0% | |
| GAAGTCAGGATACGAGCTGG+GGG | - | chr5.4:42405096-42405115 | MS.gene78719:CDS | 55.0% | |
| GAGGAGATGGATCCCAAGAG+AGG | - | chr5.4:42408190-42408209 | MS.gene78719:CDS | 55.0% | |
| GCAGTTGCAACTGGAGCTGA+GGG | + | chr5.4:42406690-42406709 | None:intergenic | 55.0% | |
| GCTGCTACAGACTTGCGAGT+TGG | - | chr5.4:42406422-42406441 | MS.gene78719:intron | 55.0% | |
| GTTTCGACCAAGGGACGAGT+GGG | + | chr5.4:42404707-42404726 | None:intergenic | 55.0% | |
| TCAGAGCCTCGTTTCGACCA+AGG | + | chr5.4:42404717-42404736 | None:intergenic | 55.0% | |
| TCCATAACCCACTCGTCCCT+TGG | - | chr5.4:42404697-42404716 | MS.gene78719:CDS | 55.0% | |
| TGCAGTTGCAACTGGAGCTG+AGG | + | chr5.4:42406691-42406710 | None:intergenic | 55.0% | |
| TGGGCTTCCATGCACTGTGA+TGG | - | chr5.4:42403954-42403973 | MS.gene78719:intron | 55.0% | |
| TGTACGAGACCCTGAGACCA+TGG | + | chr5.4:42406381-42406400 | None:intergenic | 55.0% | |
| TTAGGGAAGAAGCTGGGGGA+GGG | - | chr5.4:42404969-42404988 | MS.gene78719:intron | 55.0% | |
| TTTAGGGAAGAAGCTGGGGG+AGG | - | chr5.4:42404968-42404987 | MS.gene78719:intron | 55.0% | |
| ! | CCATGCACTGTGATGGAGTG+TGG | - | chr5.4:42403961-42403980 | MS.gene78719:intron | 55.0% |
| ! | CTCGATGTGGCGCTGAACTT+AGG | - | chr5.4:42407321-42407340 | MS.gene78719:intron | 55.0% |
| ! | GCGCCAAGGCTCCCTATTTT+TGG | - | chr5.4:42407819-42407838 | MS.gene78719:CDS | 55.0% |
| ! | GGAGAGAGTGCAGTTGCAAC+TGG | + | chr5.4:42406699-42406718 | None:intergenic | 55.0% |
| ! | TGTGGCGCTGAACTTAGGAG+AGG | - | chr5.4:42407326-42407345 | MS.gene78719:intron | 55.0% |
| !! | ACCAAGGGACGAGTGGGTTA+TGG | + | chr5.4:42404701-42404720 | None:intergenic | 55.0% |
| AAGGTCGCCAGTATCAGCCC+CGG | - | chr5.4:42406083-42406102 | MS.gene78719:intron | 60.0% | |
| ACCATCACCGGGGCTGATAC+TGG | + | chr5.4:42406093-42406112 | None:intergenic | 60.0% | |
| CGTTTCGACCAAGGGACGAG+TGG | + | chr5.4:42404708-42404727 | None:intergenic | 60.0% | |
| CTCGTCCCTTGGTCGAAACG+AGG | - | chr5.4:42404708-42404727 | MS.gene78719:CDS | 60.0% | |
| ! | ACTGGAGCTGAGGGTGCAGA+TGG | + | chr5.4:42406681-42406700 | None:intergenic | 60.0% |
| !! | CTTGCACTGCATGGTGGTGG+TGG | + | chr5.4:42403856-42403875 | None:intergenic | 60.0% |
| !! | GCTACACCTGGTGTTGCTCC+TGG | - | chr5.4:42404081-42404100 | MS.gene78719:intron | 60.0% |
| GCCAGTATCAGCCCCGGTGA+TGG | - | chr5.4:42406089-42406108 | MS.gene78719:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 42403739 | 42408217 | 42403739 | ID=MS.gene78719 |
| chr5.4 | mRNA | 42403739 | 42408217 | 42403739 | ID=MS.gene78719.t1;Parent=MS.gene78719 |
| chr5.4 | exon | 42407792 | 42408217 | 42407792 | ID=MS.gene78719.t1.exon1;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42407792 | 42408217 | 42407792 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42406913 | 42406999 | 42406913 | ID=MS.gene78719.t1.exon2;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42406913 | 42406999 | 42406913 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42406426 | 42406545 | 42406426 | ID=MS.gene78719.t1.exon3;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42406426 | 42406545 | 42406426 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42406204 | 42406302 | 42406204 | ID=MS.gene78719.t1.exon4;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42406204 | 42406302 | 42406204 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42405661 | 42405829 | 42405661 | ID=MS.gene78719.t1.exon5;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42405661 | 42405829 | 42405661 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42405473 | 42405566 | 42405473 | ID=MS.gene78719.t1.exon6;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42405473 | 42405566 | 42405473 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42405225 | 42405318 | 42405225 | ID=MS.gene78719.t1.exon7;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42405225 | 42405318 | 42405225 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42405066 | 42405122 | 42405066 | ID=MS.gene78719.t1.exon8;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42405066 | 42405122 | 42405066 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42404322 | 42404735 | 42404322 | ID=MS.gene78719.t1.exon9;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42404322 | 42404735 | 42404322 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| chr5.4 | exon | 42403739 | 42403900 | 42403739 | ID=MS.gene78719.t1.exon10;Parent=MS.gene78719.t1 |
| chr5.4 | CDS | 42403739 | 42403900 | 42403739 | ID=cds.MS.gene78719.t1;Parent=MS.gene78719.t1 |
| Gene Sequence |
| Protein sequence |
