Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81068.t1 | XP_013444510.1 | 98.2 | 224 | 4 | 0 | 96 | 319 | 92 | 315 | 1.80E-122 | 449.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81068.t1 | Q9H9Y2 | 51.2 | 201 | 97 | 1 | 96 | 295 | 109 | 309 | 1.4e-51 | 204.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81068.t1 | A0A072TYA8 | 98.2 | 224 | 4 | 0 | 96 | 319 | 92 | 315 | 1.3e-122 | 449.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene81068 | 0.824126 | 9.56E-54 | -1.69E-46 |
| MS.gene050985 | MS.gene81068 | 0.828978 | 6.65E-55 | -1.69E-46 |
| MS.gene051963 | MS.gene81068 | 0.802253 | 6.13E-49 | -1.69E-46 |
| MS.gene052962 | MS.gene81068 | 0.808243 | 3.41E-50 | -1.69E-46 |
| MS.gene054413 | MS.gene81068 | 0.823784 | 1.15E-53 | -1.69E-46 |
| MS.gene055765 | MS.gene81068 | 0.80237 | 5.79E-49 | -1.69E-46 |
| MS.gene058245 | MS.gene81068 | 0.815019 | 1.15E-51 | -1.69E-46 |
| MS.gene060574 | MS.gene81068 | 0.835543 | 1.58E-56 | -1.69E-46 |
| MS.gene060871 | MS.gene81068 | 0.804925 | 1.71E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81068.t1 | MTR_8g023820 | 93.373 | 332 | 17 | 2 | 1 | 331 | 1 | 328 | 0.0 | 626 |
| MS.gene81068.t1 | MTR_3g019370 | 34.419 | 215 | 111 | 5 | 70 | 281 | 50 | 237 | 2.54e-31 | 119 |
| MS.gene81068.t1 | MTR_1g054855 | 80.357 | 56 | 11 | 0 | 40 | 95 | 1 | 56 | 3.88e-20 | 83.2 |
| MS.gene81068.t1 | MTR_1g087510 | 62.821 | 78 | 10 | 2 | 33 | 110 | 2 | 60 | 4.09e-20 | 86.7 |
| MS.gene81068.t1 | MTR_8g066245 | 48.810 | 84 | 27 | 4 | 33 | 110 | 2 | 75 | 5.88e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81068.t1 | AT4G01560 | 74.747 | 297 | 71 | 3 | 3 | 298 | 1 | 294 | 2.19e-158 | 447 |
| MS.gene81068.t1 | AT1G63780 | 41.667 | 168 | 92 | 3 | 117 | 281 | 73 | 237 | 1.16e-34 | 129 |
Find 74 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGATGCTCTCTTGATTAT+TGG | 0.136869 | 8.4:-71259910 | MS.gene81068:intron |
| CCCCAAGATCCCGAGTTTAA+AGG | 0.228228 | 8.4:-71258968 | MS.gene81068:CDS |
| CCCTTTAAACTCGGGATCTT+GGG | 0.231737 | 8.4:+71258967 | None:intergenic |
| TTCCGTTTCTGTTTCCGTTC+TGG | 0.284839 | 8.4:+71263239 | None:intergenic |
| GCCCTTTAAACTCGGGATCT+TGG | 0.298570 | 8.4:+71258966 | None:intergenic |
| TAAAACAATTGCCCGTCTTC+AGG | 0.332177 | 8.4:-71258717 | MS.gene81068:intron |
| GCAAGTGGTGATTAATATCT+TGG | 0.337449 | 8.4:+71260485 | None:intergenic |
| ATTTGTTTGCAGCTATTTGC+TGG | 0.345769 | 8.4:-71260555 | MS.gene81068:intron |
| TTTAATATCAGAATTGCTTC+AGG | 0.350037 | 8.4:-71260237 | MS.gene81068:CDS |
| AAATGAGCAGTAGGTCCTTC+AGG | 0.362193 | 8.4:+71259883 | None:intergenic |
| CTCTTGAAGTAATGTGCATT+TGG | 0.364971 | 8.4:+71260209 | None:intergenic |
| CCCAAGATCCCGAGTTTAAA+GGG | 0.366033 | 8.4:-71258967 | MS.gene81068:CDS |
| TGTTGAATATGCAAACAAAA+AGG | 0.392477 | 8.4:-71260066 | MS.gene81068:CDS |
| AACTCAACCTCTTCATCATC+AGG | 0.420118 | 8.4:+71262907 | None:intergenic |
| TGTGTCCCCTTGCAGAATCA+TGG | 0.442254 | 8.4:-71259410 | MS.gene81068:intron |
| TAATCATCGAAGGACGGAAC+GGG | 0.458251 | 8.4:+71263208 | None:intergenic |
| CAGTGGTAGACTGGTAGTCT+TGG | 0.463649 | 8.4:-71258327 | MS.gene81068:CDS |
| AGCTCAGGCTGGTGACTGGT+TGG | 0.478829 | 8.4:+71259383 | None:intergenic |
| CACTTGCCGCTTCAATTCTA+CGG | 0.479733 | 8.4:-71260469 | MS.gene81068:intron |
| GCTCAGGCTGGTGACTGGTT+GGG | 0.480294 | 8.4:+71259384 | None:intergenic |
| GTCTTCGGCACCTTCTTCTC+CGG | 0.480606 | 8.4:+71262970 | None:intergenic |
| ATATGAAGTCTCTCTGGTTG+TGG | 0.489756 | 8.4:+71258927 | None:intergenic |
| AACCAGAACGGAAACAGAAA+CGG | 0.491238 | 8.4:-71263241 | MS.gene81068:CDS |
| AGAGAGACTTCATATTCTTC+CGG | 0.494821 | 8.4:-71258919 | MS.gene81068:CDS |
| TTGGTGGATGCAGTATCCTC+AGG | 0.495230 | 8.4:-71258308 | MS.gene81068:CDS |
| ATTATAGCTCAGTGGTAGAC+TGG | 0.499120 | 8.4:-71258336 | MS.gene81068:intron |
| CGAAGACGATTGAAAATACA+AGG | 0.499632 | 8.4:-71262954 | MS.gene81068:CDS |
| TACACGTCGCCCTTTAAACT+CGG | 0.500125 | 8.4:+71258958 | None:intergenic |
| CACAAGCTCAGGCTGGTGAC+TGG | 0.500662 | 8.4:+71259379 | None:intergenic |
| TGGTAGACTGGTAGTCTTGG+TGG | 0.501565 | 8.4:-71258324 | MS.gene81068:CDS |
| CAAGTGGTGATTAATATCTT+GGG | 0.501651 | 8.4:+71260486 | None:intergenic |
| CTTCTTCTGATGCTTAAGCT+TGG | 0.508564 | 8.4:+71263155 | None:intergenic |
| AAGTTGTTCAACACAAGCTC+AGG | 0.513960 | 8.4:+71259368 | None:intergenic |
| CCTTTAAACTCGGGATCTTG+GGG | 0.514110 | 8.4:+71258968 | None:intergenic |
| GTTGTAGCCTCCGGAGAAGA+AGG | 0.514510 | 8.4:-71262980 | MS.gene81068:intron |
| TTGATTATTGGCTTACCTGA+AGG | 0.520117 | 8.4:-71259898 | MS.gene81068:CDS |
| TCATATTCTTCCGGCATCAT+CGG | 0.521685 | 8.4:-71258910 | MS.gene81068:intron |
| GGAAGAATATGAAGTCTCTC+TGG | 0.523080 | 8.4:+71258921 | None:intergenic |
| CCTACTTGGTTCCCTACGAT+TGG | 0.527299 | 8.4:+71260016 | None:intergenic |
| AGCAATTCTGATATTAAAGC+AGG | 0.533676 | 8.4:+71260242 | None:intergenic |
| AACAACTTCACAACACGCCT+AGG | 0.543084 | 8.4:-71259353 | MS.gene81068:CDS |
| TCTTTGTTCTTAATCATCGA+AGG | 0.545212 | 8.4:+71263198 | None:intergenic |
| ATTGACACCAACCTGAAGAC+GGG | 0.550528 | 8.4:+71258706 | None:intergenic |
| CAATGGCGATCGGTGGAAAG+AGG | 0.566083 | 8.4:-71263311 | MS.gene81068:CDS |
| TTAATCATCGAAGGACGGAA+CGG | 0.568387 | 8.4:+71263207 | None:intergenic |
| GTGAGTTTGAAATGAGCAGT+AGG | 0.571962 | 8.4:+71259874 | None:intergenic |
| AAGAATTGTACCGATGATGC+CGG | 0.586114 | 8.4:+71258900 | None:intergenic |
| GTTAAAAGAGCTATTGAGCT+CGG | 0.586757 | 8.4:-71263093 | MS.gene81068:CDS |
| AATTGACACCAACCTGAAGA+CGG | 0.586946 | 8.4:+71258705 | None:intergenic |
| TGTTCTTAATCATCGAAGGA+CGG | 0.587385 | 8.4:+71263202 | None:intergenic |
| TTGCAAGCCTGATGATGAAG+AGG | 0.594460 | 8.4:-71262914 | MS.gene81068:intron |
| GAAGTCTCTCTGGTTGTGGA+AGG | 0.594781 | 8.4:+71258931 | None:intergenic |
| TGTTCAACACAAGCTCAGGC+TGG | 0.595435 | 8.4:+71259372 | None:intergenic |
| AATTCAGTTCAATATTAAAG+CGG | 0.596200 | 8.4:-71260518 | MS.gene81068:CDS |
| ACCTTCCAACTCGATGCCCT+AGG | 0.597115 | 8.4:+71259336 | None:intergenic |
| GGAAACAGAAACGGAAACGA+AGG | 0.598065 | 8.4:-71263232 | MS.gene81068:CDS |
| TTCGGCACCTTCTTCTCCGG+AGG | 0.599893 | 8.4:+71262973 | None:intergenic |
| TAGTTGTACACACCAATCGT+AGG | 0.607640 | 8.4:-71260028 | MS.gene81068:CDS |
| CGTAGAATTGAAGCGGCAAG+TGG | 0.609118 | 8.4:+71260470 | None:intergenic |
| GTTATTCCTACAATGGCGAT+CGG | 0.609248 | 8.4:-71263321 | None:intergenic |
| AGCTATTGAGCTCGGCGAAG+AGG | 0.611918 | 8.4:-71263085 | MS.gene81068:intron |
| TTCTTGCCATTATAGCTCAG+TGG | 0.612720 | 8.4:-71258344 | MS.gene81068:intron |
| AACATACCGTAGAATTGAAG+CGG | 0.614066 | 8.4:+71260463 | None:intergenic |
| ACACGTCGCCCTTTAAACTC+GGG | 0.626716 | 8.4:+71258959 | None:intergenic |
| GCCTAGGGCATCGAGTTGGA+AGG | 0.627771 | 8.4:-71259337 | MS.gene81068:intron |
| ACACGCCTAGGGCATCGAGT+TGG | 0.629464 | 8.4:-71259341 | MS.gene81068:CDS |
| ACAACTTCACAACACGCCTA+GGG | 0.637320 | 8.4:-71259352 | MS.gene81068:CDS |
| AGTTGTACACACCAATCGTA+GGG | 0.643789 | 8.4:-71260027 | MS.gene81068:CDS |
| ATTCCTACAATGGCGATCGG+TGG | 0.646182 | 8.4:-71263318 | None:intergenic |
| AATGCACATTACTTCAAGAG+AGG | 0.646448 | 8.4:-71260206 | MS.gene81068:CDS |
| AAGCGCAACAATGATTCAGA+CGG | 0.648847 | 8.4:-71263288 | MS.gene81068:CDS |
| CTTTAAACTCGGGATCTTGG+GGG | 0.666978 | 8.4:+71258969 | None:intergenic |
| TTGCAGGTACTCAAAACCTG+AGG | 0.724418 | 8.4:+71258292 | None:intergenic |
| GAAGACGATTGAAAATACAA+GGG | 0.727075 | 8.4:-71262953 | MS.gene81068:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTGTTATAATGAAAAA+TGG | + | chr8.4:71262494-71262513 | None:intergenic | 10.0% |
| !! | AAAAACAAAATCAACAAATA+AGG | + | chr8.4:71262583-71262602 | None:intergenic | 15.0% |
| !! | CAATACTTAAAATATACAAT+GGG | - | chr8.4:71260203-71260222 | MS.gene81068:CDS | 15.0% |
| !! | GTTGTTTATAAATATAACAA+TGG | - | chr8.4:71261783-71261802 | MS.gene81068:intron | 15.0% |
| !!! | AAATACTTCTAGTTTTTAAA+TGG | + | chr8.4:71259814-71259833 | None:intergenic | 15.0% |
| !!! | AAATGATGTATTCAATTTTT+TGG | - | chr8.4:71259841-71259860 | MS.gene81068:intron | 15.0% |
| !!! | AACTATTTTAAGAGAATTTA+AGG | - | chr8.4:71260670-71260689 | MS.gene81068:intron | 15.0% |
| !!! | AACTTAATAGAAGATTTTTA+AGG | - | chr8.4:71259091-71259110 | MS.gene81068:intron | 15.0% |
| !!! | AATACTTCTAGTTTTTAAAT+GGG | + | chr8.4:71259813-71259832 | None:intergenic | 15.0% |
| !!! | ACTATTTTAAGAGAATTTAA+GGG | - | chr8.4:71260671-71260690 | MS.gene81068:intron | 15.0% |
| !!! | AGAATATATATTTTGGTTAT+TGG | - | chr8.4:71258780-71258799 | MS.gene81068:CDS | 15.0% |
| !!! | ATTATTTTCAAGGTTTTTAA+AGG | + | chr8.4:71260482-71260501 | None:intergenic | 15.0% |
| !!! | CTGTTTTTCTTTTTTTTTTT+GGG | - | chr8.4:71259613-71259632 | MS.gene81068:intron | 15.0% |
| !!! | GAGATTAGAAATTTTTTTAA+CGG | + | chr8.4:71260119-71260138 | None:intergenic | 15.0% |
| !!! | TGACTTTTTTTTTTTTTTAC+AGG | + | chr8.4:71261941-71261960 | None:intergenic | 15.0% |
| !!! | TGTTATTTAAAGATATCTTA+GGG | - | chr8.4:71260731-71260750 | MS.gene81068:intron | 15.0% |
| !!! | TGTTTTTCTTTTTTTTTTTG+GGG | - | chr8.4:71259614-71259633 | MS.gene81068:intron | 15.0% |
| !! | AAAAAATAAACTATGATGCT+AGG | - | chr8.4:71258852-71258871 | MS.gene81068:intron | 20.0% |
| !! | AAAAACCTTGAAAATAATGA+TGG | - | chr8.4:71260484-71260503 | MS.gene81068:CDS | 20.0% |
| !! | AACTCTAGATTATATAAACT+AGG | - | chr8.4:71260873-71260892 | MS.gene81068:intron | 20.0% |
| !! | AATTCAGTTCAATATTAAAG+CGG | - | chr8.4:71261077-71261096 | MS.gene81068:intron | 20.0% |
| !! | ACGTAAGTTATATATAATAG+TGG | - | chr8.4:71263040-71263059 | MS.gene81068:intron | 20.0% |
| !! | ACTCTAGATTATATAAACTA+GGG | - | chr8.4:71260874-71260893 | MS.gene81068:intron | 20.0% |
| !! | AGAGTATAAACCTATTAATT+TGG | + | chr8.4:71260391-71260410 | None:intergenic | 20.0% |
| !! | ATCCATTCATTTATTTGAAT+AGG | - | chr8.4:71259483-71259502 | MS.gene81068:intron | 20.0% |
| !! | ATGTCTATTATAAAACTAGA+GGG | - | chr8.4:71260700-71260719 | MS.gene81068:intron | 20.0% |
| !! | ATTAAAAAGATTGAGTCTAA+AGG | - | chr8.4:71262813-71262832 | MS.gene81068:intron | 20.0% |
| !! | CCAATCATACATAAAAATTT+AGG | + | chr8.4:71258736-71258755 | None:intergenic | 20.0% |
| !! | GAAAATAATGATGTTCTTAA+CGG | - | chr8.4:71260611-71260630 | MS.gene81068:intron | 20.0% |
| !! | GCAATACTTAAAATATACAA+TGG | - | chr8.4:71260202-71260221 | MS.gene81068:CDS | 20.0% |
| !! | GTTATTTAAAGATATCTTAG+GGG | - | chr8.4:71260732-71260751 | MS.gene81068:intron | 20.0% |
| !! | TAAGAGAAATTATATGGATT+TGG | - | chr8.4:71259048-71259067 | MS.gene81068:intron | 20.0% |
| !! | TAATAAGAAAATGATGAAAG+TGG | - | chr8.4:71258997-71259016 | MS.gene81068:intron | 20.0% |
| !! | TATGATTTAAAAAAGGTGAT+GGG | - | chr8.4:71261416-71261435 | MS.gene81068:intron | 20.0% |
| !! | TTATTTCCTTTAAGCTTAAA+GGG | + | chr8.4:71260855-71260874 | None:intergenic | 20.0% |
| !!! | AAAAACTAGAAGTATTTTGT+TGG | - | chr8.4:71259817-71259836 | MS.gene81068:intron | 20.0% |
| !!! | AAAATATACAATGGGTTTTT+TGG | - | chr8.4:71260211-71260230 | MS.gene81068:CDS | 20.0% |
| !!! | AAATATACAATGGGTTTTTT+GGG | - | chr8.4:71260212-71260231 | MS.gene81068:CDS | 20.0% |
| !!! | AAGAACATCATTATTTTCAA+TGG | + | chr8.4:71260609-71260628 | None:intergenic | 20.0% |
| !!! | AATTTCGATCATTGATTTTT+GGG | - | chr8.4:71259991-71260010 | MS.gene81068:intron | 20.0% |
| !!! | ACAATCTTTAAAATATGAGT+AGG | + | chr8.4:71261625-71261644 | None:intergenic | 20.0% |
| !!! | CCTAAATTTTTATGTATGAT+TGG | - | chr8.4:71258733-71258752 | MS.gene81068:CDS | 20.0% |
| !!! | CTCAATCTTTTTAATTTCTT+TGG | + | chr8.4:71262808-71262827 | None:intergenic | 20.0% |
| !!! | GATTTTTAAGGTTTCAAAAT+TGG | - | chr8.4:71259103-71259122 | MS.gene81068:intron | 20.0% |
| !!! | GCTGTTTTTCTTTTTTTTTT+TGG | - | chr8.4:71259612-71259631 | MS.gene81068:intron | 20.0% |
| !!! | GTGTTATTTAAAGATATCTT+AGG | - | chr8.4:71260730-71260749 | MS.gene81068:intron | 20.0% |
| !!! | TGAGTGTAGAATATATATTT+TGG | - | chr8.4:71258773-71258792 | MS.gene81068:CDS | 20.0% |
| !!! | TTAGTCAACAGAATTTATTT+TGG | + | chr8.4:71261014-71261033 | None:intergenic | 20.0% |
| !!! | TTTTTTGCAATCACTTATTT+GGG | - | chr8.4:71260349-71260368 | MS.gene81068:intron | 20.0% |
| !!! | TTTTTTTGCAATCACTTATT+TGG | - | chr8.4:71260348-71260367 | MS.gene81068:intron | 20.0% |
| ! | AAAGTGGAATTCATCTAAAT+AGG | + | chr8.4:71262063-71262082 | None:intergenic | 25.0% |
| ! | AACAAAGTCTAATCAAAAAG+TGG | + | chr8.4:71262079-71262098 | None:intergenic | 25.0% |
| ! | AGGAACCTATGATTTAAAAA+AGG | - | chr8.4:71261409-71261428 | MS.gene81068:intron | 25.0% |
| ! | AGTTGCTAAGAGAAATTATA+TGG | - | chr8.4:71259042-71259061 | MS.gene81068:intron | 25.0% |
| ! | ATGGACAAAACCAAATTAAT+AGG | - | chr8.4:71260378-71260397 | MS.gene81068:intron | 25.0% |
| ! | ATTATAACAAATTTCTCCTC+TGG | - | chr8.4:71262500-71262519 | MS.gene81068:intron | 25.0% |
| ! | CACCTATTCAAATAAATGAA+TGG | + | chr8.4:71259488-71259507 | None:intergenic | 25.0% |
| ! | CATGTCTATTATAAAACTAG+AGG | - | chr8.4:71260699-71260718 | MS.gene81068:intron | 25.0% |
| ! | CTAAGCAGTAAGTATTATTA+TGG | - | chr8.4:71262416-71262435 | MS.gene81068:intron | 25.0% |
| ! | CTATGATTTAAAAAAGGTGA+TGG | - | chr8.4:71261415-71261434 | MS.gene81068:intron | 25.0% |
| ! | GGATTTGGCTATTATAAAAT+AGG | - | chr8.4:71259063-71259082 | MS.gene81068:intron | 25.0% |
| ! | TGTCTATTATAAAACTAGAG+GGG | - | chr8.4:71260701-71260720 | MS.gene81068:intron | 25.0% |
| ! | TGTTGAATATGCAAACAAAA+AGG | - | chr8.4:71261529-71261548 | MS.gene81068:intron | 25.0% |
| ! | TTTAATATCAGAATTGCTTC+AGG | - | chr8.4:71261358-71261377 | MS.gene81068:intron | 25.0% |
| !! | AATTTACATTGACTAGTCAA+TGG | + | chr8.4:71262957-71262976 | None:intergenic | 25.0% |
| !! | CACCAATAATTTGAAACAAA+TGG | + | chr8.4:71262737-71262756 | None:intergenic | 25.0% |
| !! | GTTAGGATTTTATCATCAAA+GGG | - | chr8.4:71259148-71259167 | MS.gene81068:intron | 25.0% |
| !! | GTTATTTCCTTTAAGCTTAA+AGG | + | chr8.4:71260856-71260875 | None:intergenic | 25.0% |
| !! | TACTCCTAAAAGTGTAAAAT+AGG | + | chr8.4:71261247-71261266 | None:intergenic | 25.0% |
| !! | TCACTTATTTGGGATAAAAA+TGG | - | chr8.4:71260359-71260378 | MS.gene81068:intron | 25.0% |
| !! | TGCCATTTGTTTCAAATTAT+TGG | - | chr8.4:71262732-71262751 | MS.gene81068:intron | 25.0% |
| !! | TGTTAGGATTTTATCATCAA+AGG | - | chr8.4:71259147-71259166 | MS.gene81068:intron | 25.0% |
| !! | TTTGATTAGACTTTGTTATC+TGG | - | chr8.4:71262082-71262101 | MS.gene81068:intron | 25.0% |
| !!! | ATTTTAAGAGAATTTAAGGG+AGG | - | chr8.4:71260674-71260693 | MS.gene81068:intron | 25.0% |
| !!! | CAATTTCGATCATTGATTTT+TGG | - | chr8.4:71259990-71260009 | MS.gene81068:intron | 25.0% |
| !!! | CATCACCTTTTTTAAATCAT+AGG | + | chr8.4:71261417-71261436 | None:intergenic | 25.0% |
| !!! | TTTTCATTGCTTTTATTGTG+TGG | - | chr8.4:71263013-71263032 | MS.gene81068:intron | 25.0% |
| AAATCAAATCAAGAAGGCAA+GGG | + | chr8.4:71261219-71261238 | None:intergenic | 30.0% | |
| AAATGATCTGAATCAACATG+TGG | + | chr8.4:71260313-71260332 | None:intergenic | 30.0% | |
| AATAGGTTTATACTCTGCAA+CGG | - | chr8.4:71260395-71260414 | MS.gene81068:intron | 30.0% | |
| AATATACCTAAGAACGTGAT+TGG | + | chr8.4:71262778-71262797 | None:intergenic | 30.0% | |
| ACAACAATGGCAGTAATATT+CGG | - | chr8.4:71260549-71260568 | MS.gene81068:intron | 30.0% | |
| ACGAAACAAGAGTAATTCTT+GGG | - | chr8.4:71260906-71260925 | MS.gene81068:intron | 30.0% | |
| AGCAATTCTGATATTAAAGC+AGG | + | chr8.4:71261356-71261375 | None:intergenic | 30.0% | |
| AGCTATTCAACGAAAAATCA+AGG | + | chr8.4:71260775-71260794 | None:intergenic | 30.0% | |
| AGTAGTAGTAAAAGGAAGAT+AGG | - | chr8.4:71263176-71263195 | MS.gene81068:CDS | 30.0% | |
| AGTATTGCAATATGCTTTCA+TGG | + | chr8.4:71260190-71260209 | None:intergenic | 30.0% | |
| ATTGTCTACTCATGTGATTT+AGG | - | chr8.4:71263125-71263144 | MS.gene81068:CDS | 30.0% | |
| ATTTAAAGATATCTTAGGGG+AGG | - | chr8.4:71260735-71260754 | MS.gene81068:intron | 30.0% | |
| CAACAGAAATTCTAAACAAC+AGG | + | chr8.4:71259721-71259740 | None:intergenic | 30.0% | |
| CAAGTGGTGATTAATATCTT+GGG | + | chr8.4:71261112-71261131 | None:intergenic | 30.0% | |
| CCTTGAAAAGTTTACAACAA+TGG | - | chr8.4:71260536-71260555 | MS.gene81068:CDS | 30.0% | |
| GAAGACGATTGAAAATACAA+GGG | - | chr8.4:71258642-71258661 | MS.gene81068:intron | 30.0% | |
| GACATTTACACAAAGCTTAA+GGG | + | chr8.4:71260033-71260052 | None:intergenic | 30.0% | |
| GCTATTCAACGAAAAATCAA+GGG | + | chr8.4:71260774-71260793 | None:intergenic | 30.0% | |
| GTCTATTATAAAACTAGAGG+GGG | - | chr8.4:71260702-71260721 | MS.gene81068:intron | 30.0% | |
| GTTTGTTCTATGAATGGTAT+TGG | - | chr8.4:71259459-71259478 | MS.gene81068:intron | 30.0% | |
| TAACAGTGTTAAGTCACAAA+GGG | - | chr8.4:71260639-71260658 | MS.gene81068:intron | 30.0% | |
| TACACTGTGAGATTTGAATT+AGG | - | chr8.4:71258818-71258837 | MS.gene81068:intron | 30.0% | |
| TCTTTGTTCTTAATCATCGA+AGG | + | chr8.4:71258400-71258419 | None:intergenic | 30.0% | |
| TGACATTTACACAAAGCTTA+AGG | + | chr8.4:71260034-71260053 | None:intergenic | 30.0% | |
| TGGCACTAACAATATAAGAA+AGG | + | chr8.4:71262474-71262493 | None:intergenic | 30.0% | |
| TTAACAGTGTTAAGTCACAA+AGG | - | chr8.4:71260638-71260657 | MS.gene81068:intron | 30.0% | |
| TTCCACTTAAATTCGTAGAT+AGG | - | chr8.4:71261883-71261902 | MS.gene81068:intron | 30.0% | |
| TTGTCATGTGAGAAAATAGA+GGG | + | chr8.4:71260065-71260084 | None:intergenic | 30.0% | |
| TTTGTCATGTGAGAAAATAG+AGG | + | chr8.4:71260066-71260085 | None:intergenic | 30.0% | |
| ! | ACAGTGTTTCTATGTAATGA+TGG | - | chr8.4:71262526-71262545 | MS.gene81068:intron | 30.0% |
| ! | CAAATTATTGACTAGTAGTC+TGG | - | chr8.4:71263094-71263113 | MS.gene81068:CDS | 30.0% |
| ! | CAACTTGTTTGTTCTATGAA+TGG | - | chr8.4:71259453-71259472 | MS.gene81068:intron | 30.0% |
| ! | CAGTGTTTCTATGTAATGAT+GGG | - | chr8.4:71262527-71262546 | MS.gene81068:intron | 30.0% |
| ! | CCATTGTTGTAAACTTTTCA+AGG | + | chr8.4:71260539-71260558 | None:intergenic | 30.0% |
| ! | CTTGTATTTTCAATCGTCTT+CGG | + | chr8.4:71258643-71258662 | None:intergenic | 30.0% |
| ! | GCATCCTATTTTACACTTTT+AGG | - | chr8.4:71261240-71261259 | MS.gene81068:intron | 30.0% |
| ! | TGTTTTACGCAAGGATATTA+AGG | - | chr8.4:71261750-71261769 | MS.gene81068:intron | 30.0% |
| !! | AAGGAAACTTAGTTTGTAGT+TGG | - | chr8.4:71259203-71259222 | MS.gene81068:intron | 30.0% |
| !!! | TTTAGTCATGCGTTTTGATT+TGG | - | chr8.4:71259255-71259274 | MS.gene81068:intron | 30.0% |
| AAACGCATGACTAAATTGTG+TGG | + | chr8.4:71259250-71259269 | None:intergenic | 35.0% | |
| AAAGGTAAAAATGACGAGGA+TGG | - | chr8.4:71262831-71262850 | MS.gene81068:intron | 35.0% | |
| AAATAGGTAAGACAAAGTGC+AGG | + | chr8.4:71262047-71262066 | None:intergenic | 35.0% | |
| AACATACCGTAGAATTGAAG+CGG | + | chr8.4:71261135-71261154 | None:intergenic | 35.0% | |
| AATGCACATTACTTCAAGAG+AGG | - | chr8.4:71261389-71261408 | MS.gene81068:intron | 35.0% | |
| AGAGAGACTTCATATTCTTC+CGG | - | chr8.4:71262676-71262695 | MS.gene81068:intron | 35.0% | |
| ATATGACAATCTGGGTTCTT+TGG | - | chr8.4:71259336-71259355 | MS.gene81068:intron | 35.0% | |
| ATCTGAATCAACATGTGGAT+AGG | + | chr8.4:71260308-71260327 | None:intergenic | 35.0% | |
| ATGGCCATTGAGTTTGAAAA+TGG | + | chr8.4:71262938-71262957 | None:intergenic | 35.0% | |
| ATTGCAATATGCTTTCATGG+TGG | + | chr8.4:71260187-71260206 | None:intergenic | 35.0% | |
| ATTTACACAAAGCTTAAGGG+AGG | + | chr8.4:71260030-71260049 | None:intergenic | 35.0% | |
| ATTTGTTTGCAGCTATTTGC+TGG | - | chr8.4:71261040-71261059 | MS.gene81068:intron | 35.0% | |
| CAAATCAAATCAAGAAGGCA+AGG | + | chr8.4:71261220-71261239 | None:intergenic | 35.0% | |
| CACGAAACAAGAGTAATTCT+TGG | - | chr8.4:71260905-71260924 | MS.gene81068:intron | 35.0% | |
| CCATTGAGTTTGAAAATGGA+AGG | + | chr8.4:71262934-71262953 | None:intergenic | 35.0% | |
| CGAAGACGATTGAAAATACA+AGG | - | chr8.4:71258641-71258660 | MS.gene81068:intron | 35.0% | |
| CTCCTATCTACGAATTTAAG+TGG | + | chr8.4:71261888-71261907 | None:intergenic | 35.0% | |
| CTCTTGAAGTAATGTGCATT+TGG | + | chr8.4:71261389-71261408 | None:intergenic | 35.0% | |
| GAATACAAACAACAGACTAG+AGG | + | chr8.4:71261159-71261178 | None:intergenic | 35.0% | |
| GATGCCAAATCAAATCAAGA+AGG | + | chr8.4:71261225-71261244 | None:intergenic | 35.0% | |
| GCAAGTGGTGATTAATATCT+TGG | + | chr8.4:71261113-71261132 | None:intergenic | 35.0% | |
| GCGTTGAAAGTAGTAGTAAA+AGG | - | chr8.4:71263168-71263187 | MS.gene81068:CDS | 35.0% | |
| GTCAAAAATCAACAGACAGA+TGG | + | chr8.4:71261316-71261335 | None:intergenic | 35.0% | |
| GTCTAAAGGTAAAAATGACG+AGG | - | chr8.4:71262827-71262846 | MS.gene81068:intron | 35.0% | |
| GTTAAAAGAGCTATTGAGCT+CGG | - | chr8.4:71258502-71258521 | MS.gene81068:intron | 35.0% | |
| TCAGATGCTCTCTTGATTAT+TGG | - | chr8.4:71261685-71261704 | MS.gene81068:intron | 35.0% | |
| TCCTTTAAGCTTAAAGGGAT+GGG | + | chr8.4:71260850-71260869 | None:intergenic | 35.0% | |
| TGAGTAGGATCTTTACTCAA+AGG | + | chr8.4:71261610-71261629 | None:intergenic | 35.0% | |
| TGTCATGTGAGAAAATAGAG+GGG | + | chr8.4:71260064-71260083 | None:intergenic | 35.0% | |
| TGTTATCTGGAAAGATCAAG+TGG | - | chr8.4:71262095-71262114 | MS.gene81068:intron | 35.0% | |
| TGTTCTTAATCATCGAAGGA+CGG | + | chr8.4:71258396-71258415 | None:intergenic | 35.0% | |
| TTCCAAGAGAAAAACCAGAA+CGG | - | chr8.4:71258342-71258361 | MS.gene81068:intron | 35.0% | |
| TTCCTTAACTAGTGCTCTAA+GGG | + | chr8.4:71259189-71259208 | None:intergenic | 35.0% | |
| TTCCTTTAAGCTTAAAGGGA+TGG | + | chr8.4:71260851-71260870 | None:intergenic | 35.0% | |
| TTTCCTTAACTAGTGCTCTA+AGG | + | chr8.4:71259190-71259209 | None:intergenic | 35.0% | |
| ! | AGAAAATTCGAAAGGGGTTT+TGG | - | chr8.4:71259303-71259322 | MS.gene81068:intron | 35.0% |
| ! | AGAATTACTCTTGTTTCGTG+TGG | + | chr8.4:71260905-71260924 | None:intergenic | 35.0% |
| ! | ATCAACTTCAAGTTTGTCAG+TGG | + | chr8.4:71258963-71258982 | None:intergenic | 35.0% |
| ! | CAACATTTAGAGCAACTGTT+AGG | - | chr8.4:71259131-71259150 | MS.gene81068:intron | 35.0% |
| ! | CCTTCCATTTTCAAACTCAA+TGG | - | chr8.4:71262931-71262950 | MS.gene81068:CDS | 35.0% |
| ! | CTTGCCTTCTTGATTTGATT+TGG | - | chr8.4:71261218-71261237 | MS.gene81068:intron | 35.0% |
| ! | TATACTCTGCAACGGTTTTA+TGG | - | chr8.4:71260403-71260422 | MS.gene81068:intron | 35.0% |
| ! | TTTTTCTGCTTTGTGTGTGT+TGG | - | chr8.4:71259641-71259660 | MS.gene81068:intron | 35.0% |
| !! | AACTTAGTTTGTAGTTGGCT+CGG | - | chr8.4:71259208-71259227 | MS.gene81068:intron | 35.0% |
| !! | AACTTTAGAGTGTAAAGTGC+AGG | + | chr8.4:71260801-71260820 | None:intergenic | 35.0% |
| !! | ATACTCTGCAACGGTTTTAT+GGG | - | chr8.4:71260404-71260423 | MS.gene81068:intron | 35.0% |
| !! | CAAGAGAGCATCTGAAAAAT+AGG | + | chr8.4:71261680-71261699 | None:intergenic | 35.0% |
| !! | TTGATTATTGGCTTACCTGA+AGG | - | chr8.4:71261697-71261716 | MS.gene81068:intron | 35.0% |
| !!! | ATTTTTGACTTCATCTGCAG+AGG | - | chr8.4:71261327-71261346 | MS.gene81068:intron | 35.0% |
| !!! | CACAAATCTTGTTTTACGCA+AGG | - | chr8.4:71261741-71261760 | MS.gene81068:intron | 35.0% |
| !!! | GAGTGTGGGTATCATTTTTT+AGG | + | chr8.4:71260160-71260179 | None:intergenic | 35.0% |
| !!! | GTAATATTCGGTGGTTTTAG+TGG | - | chr8.4:71260561-71260580 | MS.gene81068:intron | 35.0% |
| !!! | TTTTTGACTTCATCTGCAGA+GGG | - | chr8.4:71261328-71261347 | MS.gene81068:intron | 35.0% |
| AAATGTGATATGCCCATGCT+AGG | - | chr8.4:71262359-71262378 | MS.gene81068:intron | 40.0% | |
| AACCAGAACGGAAACAGAAA+CGG | - | chr8.4:71258354-71258373 | MS.gene81068:intron | 40.0% | |
| AACTCAACCTCTTCATCATC+AGG | + | chr8.4:71258691-71258710 | None:intergenic | 40.0% | |
| AAGCGCAACAATGATTCAGA+CGG | - | chr8.4:71258307-71258326 | MS.gene81068:CDS | 40.0% | |
| AAGTTGTTCAACACAAGCTC+AGG | + | chr8.4:71262230-71262249 | None:intergenic | 40.0% | |
| AATCAACATGTGGATAGGAG+CGG | + | chr8.4:71260303-71260322 | None:intergenic | 40.0% | |
| AATGTACACCGACATCAATG+AGG | + | chr8.4:71261829-71261848 | None:intergenic | 40.0% | |
| AATTGACACCAACCTGAAGA+CGG | + | chr8.4:71262893-71262912 | None:intergenic | 40.0% | |
| ACAATGGCAGTAATATTCGG+TGG | - | chr8.4:71260552-71260571 | MS.gene81068:intron | 40.0% | |
| ACCCATCCCTTTAAGCTTAA+AGG | - | chr8.4:71260846-71260865 | MS.gene81068:intron | 40.0% | |
| AGAAACACACCAGTAAGGAA+TGG | + | chr8.4:71260251-71260270 | None:intergenic | 40.0% | |
| AGCCGAGAAGAAAATTCGAA+AGG | - | chr8.4:71259295-71259314 | MS.gene81068:intron | 40.0% | |
| AGTCTACCACTGAGCTATAA+TGG | + | chr8.4:71263260-71263279 | None:intergenic | 40.0% | |
| AGTTGTACACACCAATCGTA+GGG | - | chr8.4:71261568-71261587 | MS.gene81068:intron | 40.0% | |
| ATAGAAACACTGTGAACCAG+AGG | + | chr8.4:71262519-71262538 | None:intergenic | 40.0% | |
| ATATGAAGTCTCTCTGGTTG+TGG | + | chr8.4:71262671-71262690 | None:intergenic | 40.0% | |
| ATGTGTCCAATCACGTTCTT+AGG | - | chr8.4:71262769-71262788 | MS.gene81068:intron | 40.0% | |
| ATTATAGCTCAGTGGTAGAC+TGG | - | chr8.4:71263259-71263278 | MS.gene81068:CDS | 40.0% | |
| ATTTCAGTCAGACCTAGCAT+GGG | + | chr8.4:71262374-71262393 | None:intergenic | 40.0% | |
| CCGAGAAGAAAATTCGAAAG+GGG | - | chr8.4:71259297-71259316 | MS.gene81068:intron | 40.0% | |
| CGTATGGCATATGACAATCT+GGG | - | chr8.4:71259328-71259347 | MS.gene81068:intron | 40.0% | |
| CTGCTTAGAAAACAACTGAC+AGG | + | chr8.4:71262404-71262423 | None:intergenic | 40.0% | |
| CTTCTTCTGATGCTTAAGCT+TGG | + | chr8.4:71258443-71258462 | None:intergenic | 40.0% | |
| CTTTGTGTGTGTTGGATTGT+TGG | - | chr8.4:71259649-71259668 | MS.gene81068:intron | 40.0% | |
| GAAAGAGGTTTGCAATGCAT+TGG | + | chr8.4:71263234-71263253 | None:intergenic | 40.0% | |
| GAGCTATAATGGCAAGAAAG+AGG | + | chr8.4:71263249-71263268 | None:intergenic | 40.0% | |
| GCATCTGAAAAATAGGAGCA+AGG | + | chr8.4:71261673-71261692 | None:intergenic | 40.0% | |
| GCCGAGAAGAAAATTCGAAA+GGG | - | chr8.4:71259296-71259315 | MS.gene81068:intron | 40.0% | |
| GGAAGAATATGAAGTCTCTC+TGG | + | chr8.4:71262677-71262696 | None:intergenic | 40.0% | |
| TAAAACAATTGCCCGTCTTC+AGG | - | chr8.4:71262878-71262897 | MS.gene81068:intron | 40.0% | |
| TAGTTGTACACACCAATCGT+AGG | - | chr8.4:71261567-71261586 | MS.gene81068:intron | 40.0% | |
| TATTTCAGTCAGACCTAGCA+TGG | + | chr8.4:71262375-71262394 | None:intergenic | 40.0% | |
| TCACTAGAAACACACCAGTA+AGG | + | chr8.4:71260256-71260275 | None:intergenic | 40.0% | |
| TCATATTCTTCCGGCATCAT+CGG | - | chr8.4:71262685-71262704 | MS.gene81068:intron | 40.0% | |
| TCGTATGGCATATGACAATC+TGG | - | chr8.4:71259327-71259346 | MS.gene81068:intron | 40.0% | |
| TCTGATCTCCTCATTGATGT+CGG | - | chr8.4:71261818-71261837 | MS.gene81068:intron | 40.0% | |
| TTAATCATCGAAGGACGGAA+CGG | + | chr8.4:71258391-71258410 | None:intergenic | 40.0% | |
| TTCTTGCCATTATAGCTCAG+TGG | - | chr8.4:71263251-71263270 | MS.gene81068:CDS | 40.0% | |
| TTTAGGAGTAAGAGTCGAGT+TGG | - | chr8.4:71261257-71261276 | MS.gene81068:intron | 40.0% | |
| ! | AAGAATTGTACCGATGATGC+CGG | + | chr8.4:71262698-71262717 | None:intergenic | 40.0% |
| ! | CATCATGTTTTCTTGCCTTC+TGG | - | chr8.4:71259563-71259582 | MS.gene81068:intron | 40.0% |
| ! | CCCCTTTCGAATTTTCTTCT+CGG | + | chr8.4:71259300-71259319 | None:intergenic | 40.0% |
| ! | CGCTGCCATCATTATTTTCA+AGG | + | chr8.4:71260492-71260511 | None:intergenic | 40.0% |
| ! | GATAGTTGATGCTAACGAGA+TGG | - | chr8.4:71259395-71259414 | MS.gene81068:CDS | 40.0% |
| ! | GTGAGTTTGAAATGAGCAGT+AGG | + | chr8.4:71261724-71261743 | None:intergenic | 40.0% |
| !! | GAAGACGGGCAATTGTTTTA+TGG | + | chr8.4:71262878-71262897 | None:intergenic | 40.0% |
| !! | GTAGGAGAACTTTAGAGTGT+AGG | + | chr8.4:71260808-71260827 | None:intergenic | 40.0% |
| !! | TACTCTGCAACGGTTTTATG+GGG | - | chr8.4:71260405-71260424 | MS.gene81068:intron | 40.0% |
| !!! | ATATTCGGTGGTTTTAGTGG+AGG | - | chr8.4:71260564-71260583 | MS.gene81068:intron | 40.0% |
| !!! | CTGACTGCTTTTTATCCACA+CGG | + | chr8.4:71261461-71261480 | None:intergenic | 40.0% |
| !!! | TTCCGTTCTGGTTTTTCTCT+TGG | + | chr8.4:71258347-71258366 | None:intergenic | 40.0% |
| !!! | TTTTGACTTCATCTGCAGAG+GGG | - | chr8.4:71261329-71261348 | MS.gene81068:intron | 40.0% |
| AAATGAGCAGTAGGTCCTTC+AGG | + | chr8.4:71261715-71261734 | None:intergenic | 45.0% | |
| AACAACTTCACAACACGCCT+AGG | - | chr8.4:71262242-71262261 | MS.gene81068:intron | 45.0% | |
| AACTAGACTGCTCTAACAGC+TGG | + | chr8.4:71260096-71260115 | None:intergenic | 45.0% | |
| AAGCTTAAAGGGATGGGTGT+AGG | + | chr8.4:71260844-71260863 | None:intergenic | 45.0% | |
| ACAACTTCACAACACGCCTA+GGG | - | chr8.4:71262243-71262262 | MS.gene81068:intron | 45.0% | |
| ACTAGACTGCTCTAACAGCT+GGG | + | chr8.4:71260095-71260114 | None:intergenic | 45.0% | |
| ATGGCAGCGCTAGATATTTG+GGG | - | chr8.4:71260503-71260522 | MS.gene81068:CDS | 45.0% | |
| ATTGACACCAACCTGAAGAC+GGG | + | chr8.4:71262892-71262911 | None:intergenic | 45.0% | |
| CAGTGTTAAGTCACAAAGGG+AGG | - | chr8.4:71260642-71260661 | MS.gene81068:intron | 45.0% | |
| CCCAAGATCCCGAGTTTAAA+GGG | - | chr8.4:71262628-71262647 | MS.gene81068:intron | 45.0% | |
| CCCTTTAAACTCGGGATCTT+GGG | + | chr8.4:71262631-71262650 | None:intergenic | 45.0% | |
| CCTTTAAACTCGGGATCTTG+GGG | + | chr8.4:71262630-71262649 | None:intergenic | 45.0% | |
| CGAAAAACGCGCTAAGTCTA+AGG | - | chr8.4:71258465-71258484 | MS.gene81068:intron | 45.0% | |
| CGTGTGTTTCCATTCCTTAC+TGG | - | chr8.4:71260239-71260258 | MS.gene81068:CDS | 45.0% | |
| CTTTAAACTCGGGATCTTGG+GGG | + | chr8.4:71262629-71262648 | None:intergenic | 45.0% | |
| GATGGCAGCGCTAGATATTT+GGG | - | chr8.4:71260502-71260521 | MS.gene81068:CDS | 45.0% | |
| GCTATGATGACTCGTGCAAA+CGG | + | chr8.4:71259520-71259539 | None:intergenic | 45.0% | |
| GGAAACAGAAACGGAAACGA+AGG | - | chr8.4:71258363-71258382 | MS.gene81068:intron | 45.0% | |
| GTGTGTTGGATTGTTGGTGT+GGG | - | chr8.4:71259655-71259674 | MS.gene81068:intron | 45.0% | |
| TAATCATCGAAGGACGGAAC+GGG | + | chr8.4:71258390-71258409 | None:intergenic | 45.0% | |
| TACACGTCGCCCTTTAAACT+CGG | + | chr8.4:71262640-71262659 | None:intergenic | 45.0% | |
| TCACTATCTCTTTCACCGTG+TGG | - | chr8.4:71261443-71261462 | MS.gene81068:intron | 45.0% | |
| TCATGCTAACATGTGCCCTA+CGG | + | chr8.4:71259911-71259930 | None:intergenic | 45.0% | |
| TGATGGCAGCGCTAGATATT+TGG | - | chr8.4:71260501-71260520 | MS.gene81068:CDS | 45.0% | |
| TGTGTGTTGGATTGTTGGTG+TGG | - | chr8.4:71259654-71259673 | MS.gene81068:intron | 45.0% | |
| TGTGTTGGATTGTTGGTGTG+GGG | - | chr8.4:71259656-71259675 | MS.gene81068:intron | 45.0% | |
| TTCCGTTTCTGTTTCCGTTC+TGG | + | chr8.4:71258359-71258378 | None:intergenic | 45.0% | |
| TTGCAGGTACTCAAAACCTG+AGG | + | chr8.4:71263306-71263325 | None:intergenic | 45.0% | |
| ! | CACTTGCCGCTTCAATTCTA+CGG | - | chr8.4:71261126-71261145 | MS.gene81068:intron | 45.0% |
| ! | TGCCCTTAGAGCACTAGTTA+AGG | - | chr8.4:71259184-71259203 | MS.gene81068:intron | 45.0% |
| ! | TTCATGGTGGAAGAGAGTGT+GGG | + | chr8.4:71260174-71260193 | None:intergenic | 45.0% |
| ! | TTGCAAGCCTGATGATGAAG+AGG | - | chr8.4:71258681-71258700 | MS.gene81068:intron | 45.0% |
| ! | TTGTGTGTTGTTGTAGCCTC+CGG | - | chr8.4:71258606-71258625 | MS.gene81068:intron | 45.0% |
| ! | TTTCATGGTGGAAGAGAGTG+TGG | + | chr8.4:71260175-71260194 | None:intergenic | 45.0% |
| !! | CGGGCAATTGTTTTATGGTC+AGG | + | chr8.4:71262873-71262892 | None:intergenic | 45.0% |
| !! | TTGCTTAAAGAGTGCCCGTA+GGG | - | chr8.4:71259893-71259912 | MS.gene81068:CDS | 45.0% |
| !!! | TAGTTGGCTCGGTTTTGCAT+TGG | - | chr8.4:71259219-71259238 | MS.gene81068:intron | 45.0% |
| !! | AATAAATAATAATTAGTTAA+AGG | + | chr8.4:71259935-71259954 | None:intergenic | 5.0% |
| !! | ATAAATAATAATTAGTTAAA+GGG | + | chr8.4:71259934-71259953 | None:intergenic | 5.0% |
| ACAATTGCCCGTCTTCAGGT+TGG | - | chr8.4:71262882-71262901 | MS.gene81068:intron | 50.0% | |
| ACACGTCGCCCTTTAAACTC+GGG | + | chr8.4:71262639-71262658 | None:intergenic | 50.0% | |
| ATAGCTGTTGTGTGAGCTGC+AGG | - | chr8.4:71259535-71259554 | MS.gene81068:intron | 50.0% | |
| ATCGTAGGGAACCAAGTAGG+TGG | - | chr8.4:71261582-71261601 | MS.gene81068:intron | 50.0% | |
| CAGTGGTAGACTGGTAGTCT+TGG | - | chr8.4:71263268-71263287 | MS.gene81068:CDS | 50.0% | |
| CATGCTAACATGTGCCCTAC+GGG | + | chr8.4:71259910-71259929 | None:intergenic | 50.0% | |
| CCAATCGTAGGGAACCAAGT+AGG | - | chr8.4:71261579-71261598 | MS.gene81068:intron | 50.0% | |
| CCCCAAGATCCCGAGTTTAA+AGG | - | chr8.4:71262627-71262646 | MS.gene81068:intron | 50.0% | |
| CCTACTTGGTTCCCTACGAT+TGG | + | chr8.4:71261582-71261601 | None:intergenic | 50.0% | |
| CGTAGAATTGAAGCGGCAAG+TGG | + | chr8.4:71261128-71261147 | None:intergenic | 50.0% | |
| CTAGACTGCTCTAACAGCTG+GGG | + | chr8.4:71260094-71260113 | None:intergenic | 50.0% | |
| GAAGTCTCTCTGGTTGTGGA+AGG | + | chr8.4:71262667-71262686 | None:intergenic | 50.0% | |
| GATGCTAACGAGATGGTCGA+TGG | - | chr8.4:71259402-71259421 | MS.gene81068:intron | 50.0% | |
| GCCCTTTAAACTCGGGATCT+TGG | + | chr8.4:71262632-71262651 | None:intergenic | 50.0% | |
| GGACTCCATGATTCTGCAAG+GGG | + | chr8.4:71262193-71262212 | None:intergenic | 50.0% | |
| GGGACTCCATGATTCTGCAA+GGG | + | chr8.4:71262194-71262213 | None:intergenic | 50.0% | |
| GGTCGATGGAGATGTAGTCT+TGG | - | chr8.4:71259416-71259435 | MS.gene81068:intron | 50.0% | |
| TGGGACTCCATGATTCTGCA+AGG | + | chr8.4:71262195-71262214 | None:intergenic | 50.0% | |
| TGGGGATCTGTTGGATACAG+CGG | - | chr8.4:71259674-71259693 | MS.gene81068:intron | 50.0% | |
| TGTGTCCCCTTGCAGAATCA+TGG | - | chr8.4:71262185-71262204 | MS.gene81068:intron | 50.0% | |
| TGTTCAACACAAGCTCAGGC+TGG | + | chr8.4:71262226-71262245 | None:intergenic | 50.0% | |
| TTGTTGGTGTGGGGATCTGT+TGG | - | chr8.4:71259665-71259684 | MS.gene81068:intron | 50.0% | |
| ! | CTGATTTGTGCGCGCATGTA+CGG | - | chr8.4:71259759-71259778 | MS.gene81068:intron | 50.0% |
| ! | TGGTAGACTGGTAGTCTTGG+TGG | - | chr8.4:71263271-71263290 | MS.gene81068:CDS | 50.0% |
| ! | TTGGTGGATGCAGTATCCTC+AGG | - | chr8.4:71263287-71263306 | MS.gene81068:CDS | 50.0% |
| !! | ACTCAAAGGCACCACCTACT+TGG | + | chr8.4:71261596-71261615 | None:intergenic | 50.0% |
| !! | AGGAGTAAGAGTCGAGTTGG+AGG | - | chr8.4:71261260-71261279 | MS.gene81068:intron | 50.0% |
| !! | CTTGCTTAAAGAGTGCCCGT+AGG | - | chr8.4:71259892-71259911 | MS.gene81068:CDS | 50.0% |
| !!! | GAAAGGGGTTTTGGCTCGTA+TGG | - | chr8.4:71259312-71259331 | MS.gene81068:intron | 50.0% |
| ACCTTCCAACTCGATGCCCT+AGG | + | chr8.4:71262262-71262281 | None:intergenic | 55.0% | |
| AGCTATTGAGCTCGGCGAAG+AGG | - | chr8.4:71258510-71258529 | MS.gene81068:intron | 55.0% | |
| CTGTTGTGTGAGCTGCAGGT+CGG | - | chr8.4:71259539-71259558 | MS.gene81068:intron | 55.0% | |
| GCTCTAATTGACCCGTGCCT+CGG | + | chr8.4:71258885-71258904 | None:intergenic | 55.0% | |
| GTCTTCGGCACCTTCTTCTC+CGG | + | chr8.4:71258628-71258647 | None:intergenic | 55.0% | |
| GTTGTAGCCTCCGGAGAAGA+AGG | - | chr8.4:71258615-71258634 | MS.gene81068:intron | 55.0% | |
| AGCTCAGGCTGGTGACTGGT+TGG | + | chr8.4:71262215-71262234 | None:intergenic | 60.0% | |
| CACAAGCTCAGGCTGGTGAC+TGG | + | chr8.4:71262219-71262238 | None:intergenic | 60.0% | |
| CAGCAGTACCACTGCACCAG+AGG | + | chr8.4:71259593-71259612 | None:intergenic | 60.0% | |
| CTTGCCTTCTGGTCTGCCTC+TGG | - | chr8.4:71259574-71259593 | MS.gene81068:intron | 60.0% | |
| GACTGCTCTAACAGCTGGGG+AGG | + | chr8.4:71260091-71260110 | None:intergenic | 60.0% | |
| TGCACCAGAGGCAGACCAGA+AGG | + | chr8.4:71259581-71259600 | None:intergenic | 60.0% | |
| TTCGGCACCTTCTTCTCCGG+AGG | + | chr8.4:71258625-71258644 | None:intergenic | 60.0% | |
| ! | GCTCAGGCTGGTGACTGGTT+GGG | + | chr8.4:71262214-71262233 | None:intergenic | 60.0% |
| !! | ACACGCCTAGGGCATCGAGT+TGG | - | chr8.4:71262254-71262273 | MS.gene81068:intron | 60.0% |
| !! | GCCTAGGGCATCGAGTTGGA+AGG | - | chr8.4:71262258-71262277 | MS.gene81068:intron | 60.0% |
| !! | TGATGCTAGGTGTCGCTCCG+AGG | - | chr8.4:71258865-71258884 | MS.gene81068:intron | 60.0% |
| CTGGTCTGCCTCTGGTGCAG+TGG | - | chr8.4:71259582-71259601 | MS.gene81068:intron | 65.0% | |
| !! | CTAGGTGTCGCTCCGAGGCA+CGG | - | chr8.4:71258870-71258889 | MS.gene81068:intron | 65.0% |
| !! | TAGGTGTCGCTCCGAGGCAC+GGG | - | chr8.4:71258871-71258890 | MS.gene81068:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 71258286 | 71263331 | 71258286 | ID=MS.gene81068 |
| chr8.4 | mRNA | 71258286 | 71263331 | 71258286 | ID=MS.gene81068.t1;Parent=MS.gene81068 |
| chr8.4 | exon | 71263086 | 71263331 | 71263086 | ID=MS.gene81068.t1.exon1;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71263086 | 71263331 | 71263086 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71262915 | 71262995 | 71262915 | ID=MS.gene81068.t1.exon2;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71262915 | 71262995 | 71262915 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71260470 | 71260565 | 71260470 | ID=MS.gene81068.t1.exon3;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71260470 | 71260565 | 71260470 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71260187 | 71260270 | 71260187 | ID=MS.gene81068.t1.exon4;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71260187 | 71260270 | 71260187 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71260021 | 71260090 | 71260021 | ID=MS.gene81068.t1.exon5;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71260021 | 71260090 | 71260021 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71259846 | 71259928 | 71259846 | ID=MS.gene81068.t1.exon6;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71259846 | 71259928 | 71259846 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71259338 | 71259417 | 71259338 | ID=MS.gene81068.t1.exon7;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71259338 | 71259417 | 71259338 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71258911 | 71259009 | 71258911 | ID=MS.gene81068.t1.exon8;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71258911 | 71259009 | 71258911 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71258718 | 71258826 | 71258718 | ID=MS.gene81068.t1.exon9;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71258718 | 71258826 | 71258718 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| chr8.4 | exon | 71258286 | 71258351 | 71258286 | ID=MS.gene81068.t1.exon10;Parent=MS.gene81068.t1 |
| chr8.4 | CDS | 71258286 | 71258351 | 71258286 | ID=cds.MS.gene81068.t1;Parent=MS.gene81068.t1 |
| Gene Sequence |
| Protein sequence |
