Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86086.t1 | XP_024641790.1 | 59.7 | 635 | 235 | 8 | 1 | 623 | 1 | 626 | 3.40E-208 | 734.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86086.t1 | A0A2K3NMQ5 | 58.2 | 634 | 234 | 5 | 20 | 641 | 206 | 820 | 1.3e-201 | 712.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene86086 | 0.816266 | 6.04E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene86086 | 0.821471 | 3.97E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene86086 | 0.817909 | 2.58E-52 | -1.69E-46 |
| MS.gene049271 | MS.gene86086 | 0.805769 | 1.14E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene86086 | 0.816987 | 4.17E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene86086 | 0.810165 | 1.32E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene86086 | 0.848704 | 5.17E-60 | -1.69E-46 |
| MS.gene049672 | MS.gene86086 | 0.801357 | 9.35E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene86086 | 0.806917 | 6.52E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene86086 | 0.823481 | 1.35E-53 | -1.69E-46 |
| MS.gene049824 | MS.gene86086 | 0.815942 | 7.14E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene86086 | 0.833134 | 6.35E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene86086 | 0.841783 | 3.85E-58 | -1.69E-46 |
| MS.gene049873 | MS.gene86086 | 0.837198 | 5.99E-57 | -1.69E-46 |
| MS.gene050020 | MS.gene86086 | 0.817678 | 2.91E-52 | -1.69E-46 |
| MS.gene050026 | MS.gene86086 | 0.825036 | 5.84E-54 | -1.69E-46 |
| MS.gene050137 | MS.gene86086 | 0.805241 | 1.47E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene86086 | 0.818539 | 1.86E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene86086 | 0.81265 | 3.81E-51 | -1.69E-46 |
| MS.gene05045 | MS.gene86086 | 0.847531 | 1.09E-59 | -1.69E-46 |
| MS.gene050719 | MS.gene86086 | 0.822049 | 2.92E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene86086 | 0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene86086 | 0.803026 | 4.24E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene86086 | 0.804429 | 2.17E-49 | -1.69E-46 |
| MS.gene050799 | MS.gene86086 | 0.803229 | 3.85E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene86086 | 0.813241 | 2.83E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene86086 | 0.802742 | 4.86E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene86086 | 0.831492 | 1.62E-55 | -1.69E-46 |
| MS.gene050901 | MS.gene86086 | 0.801549 | 8.54E-49 | -1.69E-46 |
| MS.gene051018 | MS.gene86086 | 0.810359 | 1.20E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene86086 | 0.806329 | 8.67E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene86086 | 0.885289 | 9.25E-72 | -1.69E-46 |
| MS.gene051265 | MS.gene86086 | 0.820144 | 8.01E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene86086 | 0.81124 | 7.73E-51 | -1.69E-46 |
| MS.gene051388 | MS.gene86086 | 0.84408 | 9.43E-59 | -1.69E-46 |
| MS.gene05157 | MS.gene86086 | 0.829768 | 4.28E-55 | -1.69E-46 |
| MS.gene051594 | MS.gene86086 | 0.84325 | 1.57E-58 | -1.69E-46 |
| MS.gene051700 | MS.gene86086 | 0.835865 | 1.31E-56 | -1.69E-46 |
| MS.gene051719 | MS.gene86086 | 0.869258 | 3.54E-66 | -1.69E-46 |
| MS.gene051720 | MS.gene86086 | 0.859918 | 2.97E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene86086 | 0.852863 | 3.49E-61 | -1.69E-46 |
| MS.gene051957 | MS.gene86086 | 0.830681 | 2.56E-55 | -1.69E-46 |
| MS.gene052012 | MS.gene86086 | 0.823574 | 1.29E-53 | -1.69E-46 |
| MS.gene052020 | MS.gene86086 | 0.8479 | 8.63E-60 | -1.69E-46 |
| MS.gene052190 | MS.gene86086 | 0.80514 | 1.54E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene86086 | 0.811488 | 6.83E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene86086 | 0.804528 | 2.07E-49 | -1.69E-46 |
| MS.gene052488 | MS.gene86086 | 0.828315 | 9.63E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene86086 | 0.809043 | 2.30E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene86086 | 0.864794 | 9.41E-65 | -1.69E-46 |
| MS.gene052561 | MS.gene86086 | 0.806562 | 7.75E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene86086 | 0.840462 | 8.57E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene86086 | 0.85169 | 7.53E-61 | -1.69E-46 |
| MS.gene052611 | MS.gene86086 | 0.846538 | 2.04E-59 | -1.69E-46 |
| MS.gene052612 | MS.gene86086 | 0.802191 | 6.31E-49 | -1.69E-46 |
| MS.gene052613 | MS.gene86086 | 0.80395 | 2.73E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene86086 | 0.811282 | 7.57E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene86086 | 0.835249 | 1.87E-56 | -1.69E-46 |
| MS.gene052829 | MS.gene86086 | 0.803356 | 3.63E-49 | -1.69E-46 |
| MS.gene052843 | MS.gene86086 | 0.804104 | 2.54E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene86086 | 0.838477 | 2.81E-57 | -1.69E-46 |
| MS.gene052867 | MS.gene86086 | 0.823048 | 1.71E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene86086 | 0.829912 | 3.95E-55 | -1.69E-46 |
| MS.gene053008 | MS.gene86086 | 0.806645 | 7.44E-50 | -1.69E-46 |
| MS.gene053054 | MS.gene86086 | -0.821147 | 4.71E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene86086 | 0.828784 | 7.42E-55 | -1.69E-46 |
| MS.gene053221 | MS.gene86086 | 0.845432 | 4.08E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene86086 | 0.884016 | 2.75E-71 | -1.69E-46 |
| MS.gene053581 | MS.gene86086 | 0.805868 | 1.08E-49 | -1.69E-46 |
| MS.gene053592 | MS.gene86086 | 0.808192 | 3.49E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene86086 | 0.817784 | 2.76E-52 | -1.69E-46 |
| MS.gene053883 | MS.gene86086 | 0.839072 | 1.97E-57 | -1.69E-46 |
| MS.gene053900 | MS.gene86086 | 0.805881 | 1.08E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene86086 | 0.825187 | 5.38E-54 | -1.69E-46 |
| MS.gene053967 | MS.gene86086 | 0.81748 | 3.23E-52 | -1.69E-46 |
| MS.gene053974 | MS.gene86086 | 0.800854 | 1.19E-48 | -1.69E-46 |
| MS.gene05414 | MS.gene86086 | 0.814925 | 1.20E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene86086 | 0.818856 | 1.58E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene86086 | 0.81559 | 8.55E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene86086 | -0.802495 | 5.46E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene86086 | 0.814092 | 1.84E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene86086 | 0.822609 | 2.16E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene86086 | 0.823262 | 1.52E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene86086 | 0.83282 | 7.60E-56 | -1.69E-46 |
| MS.gene05468 | MS.gene86086 | 0.812137 | 4.93E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene86086 | 0.861484 | 9.93E-64 | -1.69E-46 |
| MS.gene054801 | MS.gene86086 | 0.809528 | 1.81E-50 | -1.69E-46 |
| MS.gene054967 | MS.gene86086 | 0.803301 | 3.72E-49 | -1.69E-46 |
| MS.gene054991 | MS.gene86086 | 0.81633 | 5.85E-52 | -1.69E-46 |
| MS.gene055357 | MS.gene86086 | 0.8204 | 7.00E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene86086 | 0.845502 | 3.90E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene86086 | 0.878429 | 2.83E-69 | -1.69E-46 |
| MS.gene055468 | MS.gene86086 | 0.858201 | 9.69E-63 | -1.69E-46 |
| MS.gene055580 | MS.gene86086 | -0.830242 | 3.28E-55 | -1.69E-46 |
| MS.gene055589 | MS.gene86086 | 0.814755 | 1.31E-51 | -1.69E-46 |
| MS.gene055608 | MS.gene86086 | 0.803205 | 3.90E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene86086 | 0.875243 | 3.59E-68 | -1.69E-46 |
| MS.gene055808 | MS.gene86086 | 0.804816 | 1.80E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene86086 | 0.858377 | 8.59E-63 | -1.69E-46 |
| MS.gene056043 | MS.gene86086 | -0.809841 | 1.55E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene86086 | 0.806792 | 6.93E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene86086 | 0.839968 | 1.15E-57 | -1.69E-46 |
| MS.gene056173 | MS.gene86086 | 0.848657 | 5.33E-60 | -1.69E-46 |
| MS.gene056174 | MS.gene86086 | 0.803266 | 3.78E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene86086 | 0.831537 | 1.58E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene86086 | 0.825746 | 3.96E-54 | -1.69E-46 |
| MS.gene056366 | MS.gene86086 | 0.839435 | 1.59E-57 | -1.69E-46 |
| MS.gene056373 | MS.gene86086 | 0.820704 | 5.96E-53 | -1.69E-46 |
| MS.gene056498 | MS.gene86086 | 0.830641 | 2.62E-55 | -1.69E-46 |
| MS.gene056545 | MS.gene86086 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene86086 | 0.835274 | 1.85E-56 | -1.69E-46 |
| MS.gene056595 | MS.gene86086 | 0.839921 | 1.19E-57 | -1.69E-46 |
| MS.gene057026 | MS.gene86086 | 0.813633 | 2.32E-51 | -1.69E-46 |
| MS.gene057027 | MS.gene86086 | 0.821636 | 3.63E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene86086 | 0.825994 | 3.46E-54 | -1.69E-46 |
| MS.gene057414 | MS.gene86086 | 0.814799 | 1.28E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene86086 | 0.829194 | 5.90E-55 | -1.69E-46 |
| MS.gene057693 | MS.gene86086 | 0.820175 | 7.88E-53 | -1.69E-46 |
| MS.gene057736 | MS.gene86086 | 0.807874 | 4.08E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene86086 | 0.830946 | 2.21E-55 | -1.69E-46 |
| MS.gene058037 | MS.gene86086 | 0.82613 | 3.21E-54 | -1.69E-46 |
| MS.gene058084 | MS.gene86086 | 0.805875 | 1.08E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene86086 | 0.804654 | 1.95E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene86086 | 0.861719 | 8.42E-64 | -1.69E-46 |
| MS.gene058636 | MS.gene86086 | 0.852587 | 4.19E-61 | -1.69E-46 |
| MS.gene058829 | MS.gene86086 | 0.813126 | 3.00E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene86086 | 0.833413 | 5.41E-56 | -1.69E-46 |
| MS.gene059015 | MS.gene86086 | 0.801596 | 8.36E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene86086 | 0.837141 | 6.19E-57 | -1.69E-46 |
| MS.gene059272 | MS.gene86086 | 0.814759 | 1.31E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene86086 | 0.84182 | 3.77E-58 | -1.69E-46 |
| MS.gene059625 | MS.gene86086 | 0.875939 | 2.07E-68 | -1.69E-46 |
| MS.gene059725 | MS.gene86086 | 0.805646 | 1.21E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene86086 | 0.825781 | 3.89E-54 | -1.69E-46 |
| MS.gene059937 | MS.gene86086 | 0.823889 | 1.09E-53 | -1.69E-46 |
| MS.gene060137 | MS.gene86086 | -0.822606 | 2.17E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene86086 | 0.806922 | 6.50E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene86086 | 0.859348 | 4.40E-63 | -1.69E-46 |
| MS.gene060521 | MS.gene86086 | 0.819489 | 1.13E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene86086 | 0.82726 | 1.73E-54 | -1.69E-46 |
| MS.gene060587 | MS.gene86086 | 0.866235 | 3.31E-65 | -1.69E-46 |
| MS.gene060634 | MS.gene86086 | -0.804229 | 2.39E-49 | -1.69E-46 |
| MS.gene060781 | MS.gene86086 | 0.809565 | 1.78E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene86086 | 0.827081 | 1.91E-54 | -1.69E-46 |
| MS.gene060907 | MS.gene86086 | 0.808706 | 2.71E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene86086 | -0.80244 | 5.60E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86086.t1 | MTR_6g013815 | 84.167 | 120 | 9 | 1 | 584 | 703 | 25 | 134 | 2.01e-62 | 204 |
| MS.gene86086.t1 | MTR_3g028350 | 30.556 | 144 | 73 | 3 | 396 | 538 | 21 | 138 | 8.84e-16 | 75.1 |
| MS.gene86086.t1 | MTR_7g105550 | 48.750 | 80 | 36 | 1 | 370 | 449 | 5 | 79 | 2.05e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86086.t1 | AT3G17450 | 34.328 | 469 | 302 | 6 | 144 | 608 | 299 | 765 | 3.71e-94 | 311 |
| MS.gene86086.t1 | AT3G17450 | 34.328 | 469 | 302 | 6 | 144 | 608 | 299 | 765 | 3.71e-94 | 311 |
| MS.gene86086.t1 | AT4G15020 | 35.498 | 462 | 292 | 3 | 134 | 592 | 178 | 636 | 9.18e-88 | 291 |
| MS.gene86086.t1 | AT4G15020 | 35.498 | 462 | 292 | 3 | 134 | 592 | 178 | 636 | 9.18e-88 | 291 |
| MS.gene86086.t1 | AT3G22220 | 32.287 | 446 | 297 | 2 | 150 | 595 | 193 | 633 | 1.47e-77 | 264 |
| MS.gene86086.t1 | AT3G22220 | 32.287 | 446 | 297 | 2 | 150 | 595 | 193 | 633 | 1.47e-77 | 264 |
| MS.gene86086.t1 | AT3G22220 | 32.287 | 446 | 297 | 2 | 150 | 595 | 193 | 633 | 1.47e-77 | 264 |
| MS.gene86086.t1 | AT3G22220 | 32.287 | 446 | 297 | 2 | 150 | 595 | 193 | 633 | 1.47e-77 | 264 |
| MS.gene86086.t1 | AT1G79740 | 27.119 | 590 | 399 | 10 | 29 | 614 | 6 | 568 | 2.68e-71 | 244 |
| MS.gene86086.t1 | AT1G79740 | 27.119 | 590 | 399 | 10 | 29 | 614 | 6 | 568 | 2.68e-71 | 244 |
| MS.gene86086.t1 | AT1G79740 | 30.159 | 441 | 293 | 6 | 173 | 609 | 1 | 430 | 3.28e-65 | 225 |
| MS.gene86086.t1 | AT1G79740 | 30.159 | 441 | 293 | 6 | 173 | 609 | 1 | 430 | 3.28e-65 | 225 |
| MS.gene86086.t1 | AT3G13020 | 28.472 | 576 | 371 | 15 | 31 | 590 | 8 | 558 | 3.91e-62 | 218 |
| MS.gene86086.t1 | AT3G13030 | 28.074 | 488 | 334 | 7 | 105 | 590 | 14 | 486 | 4.28e-57 | 203 |
| MS.gene86086.t1 | AT3G13030 | 28.074 | 488 | 334 | 7 | 105 | 590 | 14 | 486 | 4.28e-57 | 203 |
| MS.gene86086.t1 | AT3G13030 | 28.074 | 488 | 334 | 7 | 105 | 590 | 14 | 486 | 4.28e-57 | 203 |
| MS.gene86086.t1 | AT3G13030 | 28.074 | 488 | 334 | 7 | 105 | 590 | 14 | 486 | 4.28e-57 | 203 |
| MS.gene86086.t1 | AT5G33406 | 35.926 | 270 | 170 | 3 | 352 | 619 | 2 | 270 | 1.01e-49 | 182 |
| MS.gene86086.t1 | AT3G13010 | 28.953 | 449 | 294 | 12 | 147 | 589 | 95 | 524 | 9.11e-47 | 175 |
| MS.gene86086.t1 | AT3G13030 | 25.820 | 488 | 312 | 8 | 105 | 590 | 14 | 453 | 1.42e-45 | 170 |
| MS.gene86086.t1 | AT1G43260 | 32.911 | 237 | 158 | 1 | 151 | 386 | 39 | 275 | 1.59e-40 | 150 |
| MS.gene86086.t1 | AT3G29280 | 54.015 | 137 | 46 | 3 | 570 | 699 | 48 | 174 | 1.62e-40 | 147 |
| MS.gene86086.t1 | AT3G29280 | 50.685 | 146 | 46 | 4 | 570 | 699 | 48 | 183 | 9.50e-38 | 139 |
| MS.gene86086.t1 | AT1G36095 | 34.356 | 163 | 107 | 0 | 257 | 419 | 135 | 297 | 2.78e-24 | 104 |
| MS.gene86086.t1 | AT5G31412 | 38.281 | 128 | 77 | 1 | 199 | 326 | 115 | 240 | 1.16e-20 | 95.9 |
Find 180 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTCAAATATTTACCTTTA+AGG | 0.051897 | 6.3:-8624411 | None:intergenic |
| ACAATTTCTGGGCTGGATTT+TGG | 0.147980 | 6.3:+8628388 | MS.gene86086:CDS |
| TTTAGTATGTTCCTCTTCTT+TGG | 0.151097 | 6.3:-8624526 | None:intergenic |
| TCCAGGACTATAGTGATATT+TGG | 0.181611 | 6.3:-8625450 | None:intergenic |
| GTTGGAAAGATGACAATTTC+TGG | 0.233986 | 6.3:+8628376 | MS.gene86086:CDS |
| AGCTTGACATGCAGTTCTTA+TGG | 0.234883 | 6.3:+8625707 | MS.gene86086:CDS |
| AGAGCTATATGGAAGATAAA+AGG | 0.235932 | 6.3:+8624472 | MS.gene86086:CDS |
| ACCAAATCAGTAACATTCTT+TGG | 0.278283 | 6.3:-8623908 | None:intergenic |
| GCTGCATCTTACCTAACTTT+AGG | 0.286313 | 6.3:+8624946 | MS.gene86086:CDS |
| AGGAATAGATTTGGTGAAAC+AGG | 0.295450 | 6.3:+8624909 | MS.gene86086:CDS |
| TTGTATTGTCTGTCACAATT+TGG | 0.299212 | 6.3:-8624681 | None:intergenic |
| CACTATAGTCCTGGATTTAG+AGG | 0.304361 | 6.3:+8625458 | MS.gene86086:CDS |
| GCACATTGGTGGGACTGTTT+TGG | 0.304418 | 6.3:+8625641 | MS.gene86086:CDS |
| ACAATCAGAGCTAACAAAAT+TGG | 0.305053 | 6.3:+8625670 | MS.gene86086:CDS |
| GCCAAAGAATGTTACTGATT+TGG | 0.305432 | 6.3:+8623907 | MS.gene86086:CDS |
| CTCAATCTTAGCTCTTTCTT+CGG | 0.308027 | 6.3:-8625537 | None:intergenic |
| TGGTTTAGATTCTAAGATAA+TGG | 0.310688 | 6.3:+8623883 | MS.gene86086:CDS |
| CCGTAAGGGCGGCTGATAAA+TGG | 0.325903 | 6.3:+8625612 | MS.gene86086:CDS |
| TTGCTCCAATGCCTCATAAA+TGG | 0.327403 | 6.3:-8625184 | None:intergenic |
| ATATGTCGAGGATGTGGTTT+TGG | 0.335955 | 6.3:+8625059 | MS.gene86086:CDS |
| GGTTTAGATTCTAAGATAAT+GGG | 0.339023 | 6.3:+8623884 | MS.gene86086:CDS |
| GCTTGACATGCAGTTCTTAT+GGG | 0.340385 | 6.3:+8625708 | MS.gene86086:CDS |
| GCATCCATCCCAGCTAGTTT+TGG | 0.340791 | 6.3:-8627954 | None:intergenic |
| CATTCCTCGTCTTCGCCAAC+TGG | 0.340904 | 6.3:-8625032 | None:intergenic |
| TTACGTCACTTGGCTGGAAC+TGG | 0.345492 | 6.3:+8624019 | MS.gene86086:CDS |
| ATCATCTTAAAGAGTTTGTT+AGG | 0.355223 | 6.3:-8624619 | None:intergenic |
| CCAGGACTATAGTGATATTT+GGG | 0.359234 | 6.3:-8625449 | None:intergenic |
| GAATGTTACTGATTTGGTTA+TGG | 0.361350 | 6.3:+8623913 | MS.gene86086:CDS |
| TCAATCTTAGCTCTTTCTTC+GGG | 0.361654 | 6.3:-8625536 | None:intergenic |
| GGCATTGGAGCAAGCTAAAC+AGG | 0.361924 | 6.3:+8625194 | MS.gene86086:CDS |
| TGTAATTGTCTCTTCATGAA+TGG | 0.362539 | 6.3:-8624815 | None:intergenic |
| TAAGTTGACAAGGGAAGCTT+TGG | 0.365983 | 6.3:+8624441 | MS.gene86086:CDS |
| TTACCTTTCTGTGACACCTT+TGG | 0.366893 | 6.3:-8625235 | None:intergenic |
| TTGGTTTCAAGACATGGATT+AGG | 0.372024 | 6.3:+8624364 | MS.gene86086:CDS |
| GGTCCATCCATCAACCATTA+TGG | 0.374680 | 6.3:-8624500 | None:intergenic |
| AACTTGATGATTTCGATAAA+CGG | 0.377584 | 6.3:+8625564 | MS.gene86086:CDS |
| CCTGGTTAAAGTGCTTTGTT+TGG | 0.388256 | 6.3:+8625131 | MS.gene86086:CDS |
| CATGAATACAACCTAAAGTT+AGG | 0.389412 | 6.3:-8624957 | None:intergenic |
| ACACACAATTGAGATGATAT+TGG | 0.393937 | 6.3:+8624774 | MS.gene86086:CDS |
| CTTCACTAAAGGAATAGATT+TGG | 0.395812 | 6.3:+8624900 | MS.gene86086:CDS |
| TTAGTATGTTCCTCTTCTTT+GGG | 0.398516 | 6.3:-8624525 | None:intergenic |
| CACAGGTATGGTTGAACAAA+AGG | 0.398980 | 6.3:+8627845 | MS.gene86086:CDS |
| GTAATTGTCTCTTCATGAAT+GGG | 0.406055 | 6.3:-8624814 | None:intergenic |
| CCATTTATCAGCCGCCCTTA+CGG | 0.417710 | 6.3:-8625612 | None:intergenic |
| ATGAAATTGTTGAAGAGGTT+GGG | 0.421082 | 6.3:+8624644 | MS.gene86086:CDS |
| AGAAGCCCTTGAATGAATAA+AGG | 0.422807 | 6.3:-8624857 | None:intergenic |
| AGTCATGAGGAAGGGTGTGT+TGG | 0.428618 | 6.3:+8624127 | MS.gene86086:CDS |
| CTGGCTGGACTTCCACTCCT+TGG | 0.428723 | 6.3:-8625013 | None:intergenic |
| AGCCACAGGTTCCATTTATG+AGG | 0.433469 | 6.3:+8625173 | MS.gene86086:CDS |
| CAAGGGCTTCTCTCATTCCT+CGG | 0.436209 | 6.3:+8624869 | MS.gene86086:CDS |
| GTTCTAGAGATGATTTGAAA+AGG | 0.436323 | 6.3:+8624191 | MS.gene86086:CDS |
| AAGTTCATGCCAAAACTAGC+TGG | 0.442466 | 6.3:+8627945 | MS.gene86086:CDS |
| TGGAAGAACATAGAGCTATA+TGG | 0.444164 | 6.3:+8624461 | MS.gene86086:CDS |
| TTGGAAAGATGACAATTTCT+GGG | 0.446900 | 6.3:+8628377 | MS.gene86086:CDS |
| ACAACATACTACAAAGTTGC+TGG | 0.447151 | 6.3:+8624700 | MS.gene86086:CDS |
| CGAAAAGGACTAGGTTGTAT+TGG | 0.449104 | 6.3:+8624737 | MS.gene86086:CDS |
| GATAAAAGGGTGCACCATAA+TGG | 0.450002 | 6.3:+8624486 | MS.gene86086:CDS |
| TTGTTTGGTCAGTTCAATAG+AGG | 0.450742 | 6.3:+8625146 | MS.gene86086:CDS |
| TAAACCATCATTTCCAGAAA+AGG | 0.450880 | 6.3:-8623867 | None:intergenic |
| CCCAAATATCACTATAGTCC+TGG | 0.451084 | 6.3:+8625449 | MS.gene86086:CDS |
| ACTTGATGATTTCGATAAAC+GGG | 0.452100 | 6.3:+8625565 | MS.gene86086:CDS |
| AAGGGAATGAAGTGGCTGTT+GGG | 0.455501 | 6.3:+8624167 | MS.gene86086:CDS |
| CTTAGCTCTTTCTTCGGGAT+CGG | 0.457185 | 6.3:-8625531 | None:intergenic |
| ATGCAGCTGAAGACCACATC+AGG | 0.457770 | 6.3:+8627922 | MS.gene86086:CDS |
| CCTCGTCTTCGCCAACTGGC+TGG | 0.459626 | 6.3:-8625028 | None:intergenic |
| TAACAAACTCTTTAAGATGA+TGG | 0.467474 | 6.3:+8624621 | MS.gene86086:CDS |
| CAGTTGGCGAAGACGAGGAA+TGG | 0.470149 | 6.3:+8625033 | MS.gene86086:CDS |
| CCTTTAAGGTCATCAAAAGA+AGG | 0.475758 | 6.3:-8624397 | None:intergenic |
| ATCAGCCGCCCTTACGGCTA+CGG | 0.476259 | 6.3:-8625606 | None:intergenic |
| GAGCTATATGGAAGATAAAA+GGG | 0.478658 | 6.3:+8624473 | MS.gene86086:CDS |
| AAAGATGACAATTTCTGGGC+TGG | 0.478819 | 6.3:+8628381 | MS.gene86086:CDS |
| CACTGCATTGATCATGCTCA+TGG | 0.480055 | 6.3:+8627517 | MS.gene86086:CDS |
| TCATAAATGGAACCTGTGGC+TGG | 0.481667 | 6.3:-8625171 | None:intergenic |
| TCAATAGAGGAGCCAGCCAC+AGG | 0.484351 | 6.3:+8625159 | MS.gene86086:CDS |
| TGGGTGATCCCGTAGCCGTA+AGG | 0.485493 | 6.3:+8625597 | MS.gene86086:CDS |
| TGAGGTGAGAGAGGAAATGC+TGG | 0.485652 | 6.3:+8624081 | MS.gene86086:CDS |
| TTGAATTATGCAGTTAACGT+TGG | 0.489090 | 6.3:+8628358 | MS.gene86086:intron |
| AAAGGGAATGAAGTGGCTGT+TGG | 0.490439 | 6.3:+8624166 | MS.gene86086:CDS |
| GGGTGCACCATAATGGTTGA+TGG | 0.497106 | 6.3:+8624493 | MS.gene86086:CDS |
| AGGTTCCATTTATGAGGCAT+TGG | 0.499117 | 6.3:+8625179 | MS.gene86086:CDS |
| TGGGAAATATGTCGAGGATG+TGG | 0.500347 | 6.3:+8625053 | MS.gene86086:CDS |
| GATGAAATTGTTGAAGAGGT+TGG | 0.502560 | 6.3:+8624643 | MS.gene86086:CDS |
| CCTTAAAGGTAAATATTTGA+CGG | 0.503436 | 6.3:+8624411 | MS.gene86086:CDS |
| CTAGAGATGATTTGAAAAGG+AGG | 0.505092 | 6.3:+8624194 | MS.gene86086:CDS |
| CGGTTGCAGCACTTCACTAA+AGG | 0.505508 | 6.3:+8624889 | MS.gene86086:CDS |
| GATTTGAAAAGGAGGAGAGT+TGG | 0.505908 | 6.3:+8624202 | MS.gene86086:CDS |
| TATGTTCCTCTTCTTTGGGT+CGG | 0.509046 | 6.3:-8624521 | None:intergenic |
| TTTAGCCTTTATTCATTCAA+GGG | 0.512486 | 6.3:+8624852 | MS.gene86086:CDS |
| AGTTGGCGAAGACGAGGAAT+GGG | 0.512875 | 6.3:+8625034 | MS.gene86086:CDS |
| CACAGCCCCTTGCATACTGC+AGG | 0.516801 | 6.3:+8625413 | MS.gene86086:CDS |
| TTGGCATGAACTTCCTGATG+TGG | 0.518276 | 6.3:-8627935 | None:intergenic |
| CGGAAGAAGTTAAGTTGACA+AGG | 0.518982 | 6.3:+8624431 | MS.gene86086:CDS |
| ACTGATTTGGTTATGGAGCA+TGG | 0.519145 | 6.3:+8623920 | MS.gene86086:CDS |
| AAACAGTCCCACCAATGTGC+AGG | 0.520573 | 6.3:-8625638 | None:intergenic |
| GTGATGACTACTTGTCTCGC+GGG | 0.522896 | 6.3:+8623984 | MS.gene86086:CDS |
| AAAATAGCCTGCAGTATGCA+AGG | 0.524163 | 6.3:-8625420 | None:intergenic |
| TGTTGATGGCGAAAAGGACT+AGG | 0.525094 | 6.3:+8624728 | MS.gene86086:CDS |
| CGTTGATGCGTCAAATATGT+TGG | 0.528217 | 6.3:+8624591 | MS.gene86086:CDS |
| TCAGCCGCCCTTACGGCTAC+GGG | 0.530821 | 6.3:-8625605 | None:intergenic |
| GTTGAAGTTTGTGAGGGTGT+TGG | 0.532860 | 6.3:+8624055 | MS.gene86086:CDS |
| GGGTGATCCCGTAGCCGTAA+GGG | 0.533972 | 6.3:+8625598 | MS.gene86086:CDS |
| AAGCTTCTCGAGCGGTTGCA+AGG | 0.538858 | 6.3:+8624275 | MS.gene86086:CDS |
| TTTCCAAAGGTGTCACAGAA+AGG | 0.539920 | 6.3:+8625232 | MS.gene86086:CDS |
| TTAATATCACCTCTAAATCC+AGG | 0.541578 | 6.3:-8625467 | None:intergenic |
| TTGTGAGGGTGTTGGTGATG+AGG | 0.542544 | 6.3:+8624063 | MS.gene86086:CDS |
| AATGGATTCCTGCACATTGG+TGG | 0.546930 | 6.3:+8625630 | MS.gene86086:CDS |
| AGAAAATTGTATAACAAGGA+TGG | 0.549016 | 6.3:+8625505 | MS.gene86086:CDS |
| CCAAACAAAGCACTTTAACC+AGG | 0.554111 | 6.3:-8625131 | None:intergenic |
| GAGGAAGGGTGTGTTGGAGT+TGG | 0.555127 | 6.3:+8624133 | MS.gene86086:CDS |
| GAGAAGAATGTTCACATCCA+AGG | 0.556716 | 6.3:+8624996 | MS.gene86086:CDS |
| TGAAATTGTTGAAGAGGTTG+GGG | 0.557345 | 6.3:+8624645 | MS.gene86086:CDS |
| CATGCCAAAACTAGCTGGGA+TGG | 0.557559 | 6.3:+8627950 | MS.gene86086:CDS |
| GGTATGGTTGAACAAAAGGA+TGG | 0.563367 | 6.3:+8627849 | MS.gene86086:CDS |
| AGTTGCTGGTGAGATGTTGA+TGG | 0.565937 | 6.3:+8624714 | MS.gene86086:CDS |
| GTGAGATGTTGATGGCGAAA+AGG | 0.569828 | 6.3:+8624722 | MS.gene86086:CDS |
| TGTGAGTTGGTTTCAAGACA+TGG | 0.572437 | 6.3:+8624358 | MS.gene86086:CDS |
| CTTGACATGCAGTTCTTATG+GGG | 0.573706 | 6.3:+8625709 | MS.gene86086:CDS |
| GTTTATTACTATGTGTGAGT+TGG | 0.574917 | 6.3:+8624345 | MS.gene86086:CDS |
| TGTTGGTGATGAGGTGAGAG+AGG | 0.579278 | 6.3:+8624072 | MS.gene86086:CDS |
| ATGGATTCCTGCACATTGGT+GGG | 0.581348 | 6.3:+8625631 | MS.gene86086:CDS |
| GGATAAGGAGATCACAGGTA+TGG | 0.582254 | 6.3:+8627833 | MS.gene86086:CDS |
| GATGGATGAAATTGTTGAAG+AGG | 0.583327 | 6.3:+8624639 | MS.gene86086:CDS |
| TTATCATCTTACCATCTCGA+AGG | 0.584228 | 6.3:-8625750 | None:intergenic |
| CAACATATTTGACGCATCAA+CGG | 0.585450 | 6.3:-8624590 | None:intergenic |
| TTAGTGAAGTGCTGCAACCG+AGG | 0.586944 | 6.3:-8624886 | None:intergenic |
| AAATAGCCTGCAGTATGCAA+GGG | 0.590672 | 6.3:-8625419 | None:intergenic |
| TGTGATGACTACTTGTCTCG+CGG | 0.591359 | 6.3:+8623983 | MS.gene86086:CDS |
| GCCACTGTTGTGGAGTGCAA+AGG | 0.593450 | 6.3:+8627475 | MS.gene86086:CDS |
| AGTTCATGCCAAAACTAGCT+GGG | 0.594981 | 6.3:+8627946 | MS.gene86086:CDS |
| CAAACAAAGCACTTTAACCA+GGG | 0.596306 | 6.3:-8625130 | None:intergenic |
| ATGGTTAAGAAGACTTTGAG+AGG | 0.598226 | 6.3:+8624250 | MS.gene86086:CDS |
| ATATCTTAGTGAATAATCCC+AGG | 0.599732 | 6.3:+8624548 | MS.gene86086:CDS |
| TTGCAAGAGAGTCATGAGGA+AGG | 0.602697 | 6.3:+8624118 | MS.gene86086:CDS |
| GTCTAGAAAATTGTATAACA+AGG | 0.607022 | 6.3:+8625501 | MS.gene86086:CDS |
| TGCAAGAGAGTCATGAGGAA+GGG | 0.607581 | 6.3:+8624119 | MS.gene86086:CDS |
| ACTGCATTGATCATGCTCAT+GGG | 0.609253 | 6.3:+8627518 | MS.gene86086:CDS |
| GCACCATAATGGTTGATGGA+TGG | 0.610235 | 6.3:+8624497 | MS.gene86086:CDS |
| AGTTGGGATAAGGAGATCAC+AGG | 0.611502 | 6.3:+8627828 | MS.gene86086:intron |
| GGAATAGATTTGGTGAAACA+GGG | 0.611878 | 6.3:+8624910 | MS.gene86086:CDS |
| GAATGTTCACATCCAAGGAG+TGG | 0.612273 | 6.3:+8625001 | MS.gene86086:CDS |
| GATGGACCGACCCAAAGAAG+AGG | 0.613918 | 6.3:+8624515 | MS.gene86086:CDS |
| CCAGCCAGTTGGCGAAGACG+AGG | 0.614547 | 6.3:+8625028 | MS.gene86086:CDS |
| TAATCAGAGTGCCTTCGAGA+TGG | 0.615533 | 6.3:+8625739 | MS.gene86086:CDS |
| ACCTTTGCACTCCACAACAG+TGG | 0.620667 | 6.3:-8627476 | None:intergenic |
| AAAAGAACAAGCCACTGTTG+TGG | 0.622805 | 6.3:+8627465 | MS.gene86086:CDS |
| GTTTAGATTCTAAGATAATG+GGG | 0.628119 | 6.3:+8623885 | MS.gene86086:CDS |
| GGAGTGGAAGTCCAGCCAGT+TGG | 0.628223 | 6.3:+8625017 | MS.gene86086:CDS |
| AGCTATTGCTGTCAATAACA+TGG | 0.628294 | 6.3:+8624231 | MS.gene86086:CDS |
| TGGTTAAGAAGACTTTGAGA+GGG | 0.629677 | 6.3:+8624251 | MS.gene86086:CDS |
| GGTTGTATTCATGAGAACGA+AGG | 0.633370 | 6.3:+8624967 | MS.gene86086:CDS |
| TGCCTCATAAATGGAACCTG+TGG | 0.634402 | 6.3:-8625175 | None:intergenic |
| TGTCAAGCTCAATATACGAA+TGG | 0.634622 | 6.3:-8625693 | None:intergenic |
| AGGTGAGAGAGGAAATGCTG+GGG | 0.642079 | 6.3:+8624083 | MS.gene86086:CDS |
| CAATGACATACCGCTCGATG+CGG | 0.642376 | 6.3:+8624309 | MS.gene86086:CDS |
| TGATCCCGTAGCCGTAAGGG+CGG | 0.642386 | 6.3:+8625601 | MS.gene86086:CDS |
| CATGAGCATGATCAATGCAG+TGG | 0.642794 | 6.3:-8627516 | None:intergenic |
| TTGACATGCAGTTCTTATGG+GGG | 0.643346 | 6.3:+8625710 | MS.gene86086:CDS |
| GAGGTGAGAGAGGAAATGCT+GGG | 0.644686 | 6.3:+8624082 | MS.gene86086:CDS |
| AAATGATGTTGAAGTTTGTG+AGG | 0.647447 | 6.3:+8624048 | MS.gene86086:CDS |
| CTAGCTGGGATGGATGCTGT+TGG | 0.649663 | 6.3:+8627960 | MS.gene86086:CDS |
| GAGAGGGGAAGCTTCTCGAG+CGG | 0.650063 | 6.3:+8624267 | MS.gene86086:CDS |
| TCAATTGTGTGTGTTGCACA+AGG | 0.651808 | 6.3:-8624763 | None:intergenic |
| GTATGGTTGAACAAAAGGAT+GGG | 0.653224 | 6.3:+8627850 | MS.gene86086:CDS |
| TGATTTGCAAGAGAGTCATG+AGG | 0.653227 | 6.3:+8624114 | MS.gene86086:CDS |
| AATGATGTTGAAGTTTGTGA+GGG | 0.658615 | 6.3:+8624049 | MS.gene86086:CDS |
| TCATGAAGAGACAATTACAA+AGG | 0.662380 | 6.3:+8624819 | MS.gene86086:CDS |
| ATAAATGGATTCCTGCACAT+TGG | 0.663493 | 6.3:+8625627 | MS.gene86086:CDS |
| GAGGAATGGGAAATATGTCG+AGG | 0.663935 | 6.3:+8625047 | MS.gene86086:CDS |
| AATAGCCTGCAGTATGCAAG+GGG | 0.664304 | 6.3:-8625418 | None:intergenic |
| TGATGACTACTTGTCTCGCG+GGG | 0.665196 | 6.3:+8623985 | MS.gene86086:CDS |
| TCACTCTTTACCGCATCGAG+CGG | 0.667186 | 6.3:-8624319 | None:intergenic |
| GGTTAAGAAGACTTTGAGAG+GGG | 0.667282 | 6.3:+8624252 | MS.gene86086:CDS |
| AAATTGTATAACAAGGATGG+TGG | 0.669219 | 6.3:+8625508 | MS.gene86086:CDS |
| TTAAGGTCATCAAAAGAAGG+TGG | 0.670390 | 6.3:-8624394 | None:intergenic |
| AAACAAAGCACTTTAACCAG+GGG | 0.695208 | 6.3:-8625129 | None:intergenic |
| TCATTAATGATCTCCCATGG+AGG | 0.700841 | 6.3:-8625371 | None:intergenic |
| ATACGAATGAGTCTTTCCAA+AGG | 0.701346 | 6.3:+8625219 | MS.gene86086:CDS |
| GGAAGAAGTTAAGTTGACAA+GGG | 0.723485 | 6.3:+8624432 | MS.gene86086:CDS |
| GTGTGAGACACTGAAAGCTG+AGG | 0.748209 | 6.3:+8627899 | MS.gene86086:CDS |
| GGTGATATTAAAGTTAAACG+TGG | 0.757074 | 6.3:+8625479 | MS.gene86086:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTAATTGTATTTGTAT+TGG | + | chr6.3:8625813-8625832 | MS.gene86086:intron | 10.0% |
| !!! | AAAACCTTAAAATATTTTGA+AGG | - | chr6.3:8628178-8628197 | None:intergenic | 15.0% |
| !!! | AAGATTAGATTTTAATTTTG+AGG | + | chr6.3:8626110-8626129 | MS.gene86086:intron | 15.0% |
| !!! | TGTTTTATATAAACTGTTAT+AGG | + | chr6.3:8626497-8626516 | MS.gene86086:intron | 15.0% |
| !!! | TTACTTTTTTATAACTCTAT+TGG | + | chr6.3:8628029-8628048 | MS.gene86086:intron | 15.0% |
| !!! | TTGACTTTTACTATTTTATT+TGG | + | chr6.3:8626711-8626730 | MS.gene86086:intron | 15.0% |
| !! | AACATACAAATTAATCAACA+AGG | - | chr6.3:8627167-8627186 | None:intergenic | 20.0% |
| !! | AATTAATATAAGCAAGTAGT+AGG | - | chr6.3:8625803-8625822 | None:intergenic | 20.0% |
| !! | AGCTTAAATCTTAATGATAA+TGG | + | chr6.3:8625950-8625969 | MS.gene86086:intron | 20.0% |
| !! | ATTGAATAATTACTTACGTA+TGG | + | chr6.3:8627257-8627276 | MS.gene86086:intron | 20.0% |
| !! | CAAGAAAGTAATAATAAAAC+TGG | - | chr6.3:8626944-8626963 | None:intergenic | 20.0% |
| !! | CTGTTATATCAAAAACATAT+AGG | - | chr6.3:8627440-8627459 | None:intergenic | 20.0% |
| !! | TAGGAATCAAAATAAAAATC+TGG | + | chr6.3:8627605-8627624 | MS.gene86086:intron | 20.0% |
| !! | TATAGGAAGCTTATTATAAT+AGG | + | chr6.3:8626514-8626533 | MS.gene86086:intron | 20.0% |
| !!! | AAAAAGTGAATTACTTTTCA+CGG | - | chr6.3:8625331-8625350 | None:intergenic | 20.0% |
| !!! | AAGTCCTTCAAAATATTTTA+AGG | + | chr6.3:8628171-8628190 | MS.gene86086:intron | 20.0% |
| !!! | AATAATAAAACTGGCTTTTA+AGG | - | chr6.3:8626935-8626954 | None:intergenic | 20.0% |
| !!! | AATTGTATTTGTATTGGTAT+AGG | + | chr6.3:8625819-8625838 | MS.gene86086:intron | 20.0% |
| !!! | ACTTTTACTATTTTATTTGG+TGG | + | chr6.3:8626714-8626733 | MS.gene86086:intron | 20.0% |
| !!! | CTTTTACTATTTTATTTGGT+GGG | + | chr6.3:8626715-8626734 | MS.gene86086:intron | 20.0% |
| ! | AATTGCATATGACTTTCTTA+TGG | + | chr6.3:8626241-8626260 | MS.gene86086:intron | 25.0% |
| ! | ACTTTACACACAAATTAAGA+AGG | - | chr6.3:8626453-8626472 | None:intergenic | 25.0% |
| ! | AGAAAATTGTATAACAAGGA+TGG | + | chr6.3:8625505-8625524 | MS.gene86086:CDS | 25.0% |
| ! | ATCAGTATCATAAATTGTGT+AGG | + | chr6.3:8626345-8626364 | MS.gene86086:intron | 25.0% |
| ! | ATTCTCTACTTAAAGGAAAT+TGG | - | chr6.3:8626635-8626654 | None:intergenic | 25.0% |
| ! | ATTGCATATGACTTTCTTAT+GGG | + | chr6.3:8626242-8626261 | MS.gene86086:intron | 25.0% |
| ! | CAAAATTACTGTAAAGAGAA+TGG | - | chr6.3:8627221-8627240 | None:intergenic | 25.0% |
| ! | CCTTAAAGGTAAATATTTGA+CGG | + | chr6.3:8624411-8624430 | MS.gene86086:CDS | 25.0% |
| ! | CCTTTAAGTAGAGAATATAT+CGG | + | chr6.3:8626639-8626658 | MS.gene86086:intron | 25.0% |
| ! | CTTTACACACAAATTAAGAA+GGG | - | chr6.3:8626452-8626471 | None:intergenic | 25.0% |
| ! | GTCTAGAAAATTGTATAACA+AGG | + | chr6.3:8625501-8625520 | MS.gene86086:CDS | 25.0% |
| ! | TAATGTGATCAAAGAGAAAT+CGG | - | chr6.3:8627766-8627785 | None:intergenic | 25.0% |
| !! | AACTTGATGATTTCGATAAA+CGG | + | chr6.3:8625564-8625583 | MS.gene86086:CDS | 25.0% |
| !! | ATCATCTTAAAGAGTTTGTT+AGG | - | chr6.3:8624622-8624641 | None:intergenic | 25.0% |
| !! | TTATTAGTTTCATGTCAGTT+CGG | + | chr6.3:8628064-8628083 | MS.gene86086:intron | 25.0% |
| !! | TTTAGCCTTTATTCATTCAA+GGG | + | chr6.3:8624852-8624871 | MS.gene86086:CDS | 25.0% |
| !!! | CTTTTTTATGGTGAAAGAAT+TGG | + | chr6.3:8627290-8627309 | MS.gene86086:intron | 25.0% |
| !!! | GGTTTAGATTCTAAGATAAT+GGG | + | chr6.3:8623884-8623903 | MS.gene86086:CDS | 25.0% |
| !!! | GTTTAGATTCTAAGATAATG+GGG | + | chr6.3:8623885-8623904 | MS.gene86086:CDS | 25.0% |
| !!! | TAACAAACTCTTTAAGATGA+TGG | + | chr6.3:8624621-8624640 | MS.gene86086:CDS | 25.0% |
| !!! | TGGTTTAGATTCTAAGATAA+TGG | + | chr6.3:8623883-8623902 | MS.gene86086:CDS | 25.0% |
| !!! | TTTTAGCCTTTATTCATTCA+AGG | + | chr6.3:8624851-8624870 | MS.gene86086:CDS | 25.0% |
| AAAAAGAAAAGGGAATGAAG+TGG | + | chr6.3:8624159-8624178 | MS.gene86086:CDS | 30.0% | |
| AAAATTCAACCATTTGACCA+AGG | - | chr6.3:8626972-8626991 | None:intergenic | 30.0% | |
| AAATGATGTTGAAGTTTGTG+AGG | + | chr6.3:8624048-8624067 | MS.gene86086:CDS | 30.0% | |
| AAATTCAACCATTTGACCAA+GGG | - | chr6.3:8626971-8626990 | None:intergenic | 30.0% | |
| AAATTGTATAACAAGGATGG+TGG | + | chr6.3:8625508-8625527 | MS.gene86086:CDS | 30.0% | |
| AATGATGTTGAAGTTTGTGA+GGG | + | chr6.3:8624049-8624068 | MS.gene86086:CDS | 30.0% | |
| ACAATCAGAGCTAACAAAAT+TGG | + | chr6.3:8625670-8625689 | MS.gene86086:CDS | 30.0% | |
| ACACACAATTGAGATGATAT+TGG | + | chr6.3:8624774-8624793 | MS.gene86086:CDS | 30.0% | |
| ACCAAAATGAAGATTGTACT+AGG | - | chr6.3:8626428-8626447 | None:intergenic | 30.0% | |
| ACCAAATCAGTAACATTCTT+TGG | - | chr6.3:8623911-8623930 | None:intergenic | 30.0% | |
| AGAATTTGACTACACGTTAT+TGG | + | chr6.3:8626153-8626172 | MS.gene86086:intron | 30.0% | |
| AGAGCTATATGGAAGATAAA+AGG | + | chr6.3:8624472-8624491 | MS.gene86086:CDS | 30.0% | |
| ATATCTTAGTGAATAATCCC+AGG | + | chr6.3:8624548-8624567 | MS.gene86086:CDS | 30.0% | |
| ATGAAATTGTTGAAGAGGTT+GGG | + | chr6.3:8624644-8624663 | MS.gene86086:CDS | 30.0% | |
| ATTACTTTCTTGTATACCCT+TGG | + | chr6.3:8626952-8626971 | MS.gene86086:intron | 30.0% | |
| ATTGAGATGAAGATGAAGAT+TGG | + | chr6.3:8626083-8626102 | MS.gene86086:intron | 30.0% | |
| CATGAATACAACCTAAAGTT+AGG | - | chr6.3:8624960-8624979 | None:intergenic | 30.0% | |
| CATTTAAGCAAATCAGAACT+AGG | - | chr6.3:8628300-8628319 | None:intergenic | 30.0% | |
| CCAAAATGAAGATTGTACTA+GGG | - | chr6.3:8626427-8626446 | None:intergenic | 30.0% | |
| CCGATATATTCTCTACTTAA+AGG | - | chr6.3:8626642-8626661 | None:intergenic | 30.0% | |
| CCGTCAAATATTTACCTTTA+AGG | - | chr6.3:8624414-8624433 | None:intergenic | 30.0% | |
| CTTCACTAAAGGAATAGATT+TGG | + | chr6.3:8624900-8624919 | MS.gene86086:CDS | 30.0% | |
| GAGCTATATGGAAGATAAAA+GGG | + | chr6.3:8624473-8624492 | MS.gene86086:CDS | 30.0% | |
| GGTGATATTAAAGTTAAACG+TGG | + | chr6.3:8625479-8625498 | MS.gene86086:CDS | 30.0% | |
| GTAATTGTCTCTTCATGAAT+GGG | - | chr6.3:8624817-8624836 | None:intergenic | 30.0% | |
| GTTTATTACTATGTGTGAGT+TGG | + | chr6.3:8624345-8624364 | MS.gene86086:CDS | 30.0% | |
| TAAACCATCATTTCCAGAAA+AGG | - | chr6.3:8623870-8623889 | None:intergenic | 30.0% | |
| TCATATAGAGACTTCAGATA+TGG | - | chr6.3:8626025-8626044 | None:intergenic | 30.0% | |
| TCATGAAGAGACAATTACAA+AGG | + | chr6.3:8624819-8624838 | MS.gene86086:CDS | 30.0% | |
| TGCAAAACACACAATTTGTA+AGG | - | chr6.3:8627794-8627813 | None:intergenic | 30.0% | |
| TGTAATTGTCTCTTCATGAA+TGG | - | chr6.3:8624818-8624837 | None:intergenic | 30.0% | |
| TTAATATCACCTCTAAATCC+AGG | - | chr6.3:8625470-8625489 | None:intergenic | 30.0% | |
| TTAGTATGTTCCTCTTCTTT+GGG | - | chr6.3:8624528-8624547 | None:intergenic | 30.0% | |
| TTCAAAAAGAATGTTCTCCT+GGG | - | chr6.3:8624568-8624587 | None:intergenic | 30.0% | |
| TTCTACTCAAGACAAACTAT+AGG | + | chr6.3:8627586-8627605 | MS.gene86086:intron | 30.0% | |
| TTGAATTATGCAGTTAACGT+TGG | + | chr6.3:8628358-8628377 | MS.gene86086:intron | 30.0% | |
| TTGGAAAGATGACAATTTCT+GGG | + | chr6.3:8628377-8628396 | MS.gene86086:CDS | 30.0% | |
| TTGTATTGTCTGTCACAATT+TGG | - | chr6.3:8624684-8624703 | None:intergenic | 30.0% | |
| TTTAGTATGTTCCTCTTCTT+TGG | - | chr6.3:8624529-8624548 | None:intergenic | 30.0% | |
| TTTCACCATAAAAAAGACAG+AGG | - | chr6.3:8627286-8627305 | None:intergenic | 30.0% | |
| ! | ACTTGATGATTTCGATAAAC+GGG | + | chr6.3:8625565-8625584 | MS.gene86086:CDS | 30.0% |
| ! | CATTCACCTTTTTAACAGTT+GGG | + | chr6.3:8627812-8627831 | MS.gene86086:intron | 30.0% |
| ! | CTTGACTCTTATATTTTGCT+TGG | + | chr6.3:8628331-8628350 | MS.gene86086:intron | 30.0% |
| ! | TTTTCATTAATGATCTCCCA+TGG | - | chr6.3:8625377-8625396 | None:intergenic | 30.0% |
| !! | AATGATAATGGAGACATTGA+AGG | + | chr6.3:8625962-8625981 | MS.gene86086:intron | 30.0% |
| !! | AGAAATCGGTTTGTAAAACT+AGG | - | chr6.3:8627752-8627771 | None:intergenic | 30.0% |
| !! | GAATGTTACTGATTTGGTTA+TGG | + | chr6.3:8623913-8623932 | MS.gene86086:CDS | 30.0% |
| !! | GAGTTGGTGAAAAAAGAAAA+GGG | + | chr6.3:8624149-8624168 | MS.gene86086:CDS | 30.0% |
| !! | GTTCTAGAGATGATTTGAAA+AGG | + | chr6.3:8624191-8624210 | MS.gene86086:CDS | 30.0% |
| !! | TATTTTATTTGGTGGGTCAA+GGG | + | chr6.3:8626722-8626741 | MS.gene86086:intron | 30.0% |
| AACGTAAAGAGTGGGAATTT+AGG | - | chr6.3:8626385-8626404 | None:intergenic | 35.0% | |
| AAGTCAAGAACGTAAAGAGT+GGG | - | chr6.3:8626393-8626412 | None:intergenic | 35.0% | |
| ACAACATACTACAAAGTTGC+TGG | + | chr6.3:8624700-8624719 | MS.gene86086:CDS | 35.0% | |
| AGAAGCCCTTGAATGAATAA+AGG | - | chr6.3:8624860-8624879 | None:intergenic | 35.0% | |
| AGACATTGAAGGTTTAGATG+TGG | + | chr6.3:8625973-8625992 | MS.gene86086:intron | 35.0% | |
| AGATGAAGATGAAGATTGGA+TGG | + | chr6.3:8626087-8626106 | MS.gene86086:intron | 35.0% | |
| AGCTATTGCTGTCAATAACA+TGG | + | chr6.3:8624231-8624250 | MS.gene86086:CDS | 35.0% | |
| AGGAAATTGGAAGAGCTATT+TGG | - | chr6.3:8626622-8626641 | None:intergenic | 35.0% | |
| AGTTGTTTGTATCACTCAAC+TGG | + | chr6.3:8626809-8626828 | MS.gene86086:intron | 35.0% | |
| ATACGAATGAGTCTTTCCAA+AGG | + | chr6.3:8625219-8625238 | MS.gene86086:CDS | 35.0% | |
| ATGAAGATTGTACTAGGGAT+TGG | - | chr6.3:8626422-8626441 | None:intergenic | 35.0% | |
| ATGGTTAAGAAGACTTTGAG+AGG | + | chr6.3:8624250-8624269 | MS.gene86086:CDS | 35.0% | |
| CAACAAGGTAGCATACTAAA+GGG | - | chr6.3:8627152-8627171 | None:intergenic | 35.0% | |
| CAACATATTTGACGCATCAA+CGG | - | chr6.3:8624593-8624612 | None:intergenic | 35.0% | |
| CCAGGACTATAGTGATATTT+GGG | - | chr6.3:8625452-8625471 | None:intergenic | 35.0% | |
| CCGAGAAAAAGCAATATTGA+GGG | + | chr6.3:8625920-8625939 | MS.gene86086:intron | 35.0% | |
| CTAAGAGAAGAAACCATTTG+AGG | + | chr6.3:8625848-8625867 | MS.gene86086:intron | 35.0% | |
| CTAGAGATGATTTGAAAAGG+AGG | + | chr6.3:8624194-8624213 | MS.gene86086:CDS | 35.0% | |
| CTTCAAAAAGAATGTTCTCC+TGG | - | chr6.3:8624569-8624588 | None:intergenic | 35.0% | |
| GAAAGGTAAATATGTCTTGC+AGG | + | chr6.3:8625249-8625268 | MS.gene86086:intron | 35.0% | |
| GAAGATGATGATACTGAGTA+GGG | + | chr6.3:8628418-8628437 | MS.gene86086:CDS | 35.0% | |
| GATGAAATTGTTGAAGAGGT+TGG | + | chr6.3:8624643-8624662 | MS.gene86086:CDS | 35.0% | |
| GATGGATGAAATTGTTGAAG+AGG | + | chr6.3:8624639-8624658 | MS.gene86086:CDS | 35.0% | |
| GTATGGTTGAACAAAAGGAT+GGG | + | chr6.3:8627850-8627869 | MS.gene86086:CDS | 35.0% | |
| GTTGGAAAGATGACAATTTC+TGG | + | chr6.3:8628376-8628395 | MS.gene86086:CDS | 35.0% | |
| GTTGTTTGTATCACTCAACT+GGG | + | chr6.3:8626810-8626829 | MS.gene86086:intron | 35.0% | |
| GTTTGTAAAACTAGGTACAG+AGG | - | chr6.3:8627744-8627763 | None:intergenic | 35.0% | |
| TAAAGAGTGGGAATTTAGGA+AGG | - | chr6.3:8626381-8626400 | None:intergenic | 35.0% | |
| TCAACAAGGTAGCATACTAA+AGG | - | chr6.3:8627153-8627172 | None:intergenic | 35.0% | |
| TCCAGGACTATAGTGATATT+TGG | - | chr6.3:8625453-8625472 | None:intergenic | 35.0% | |
| TGAAATTGTTGAAGAGGTTG+GGG | + | chr6.3:8624645-8624664 | MS.gene86086:CDS | 35.0% | |
| TGAAGATGATGATACTGAGT+AGG | + | chr6.3:8628417-8628436 | MS.gene86086:CDS | 35.0% | |
| TGAAGATTGTACTAGGGATT+GGG | - | chr6.3:8626421-8626440 | None:intergenic | 35.0% | |
| TGGAAGAACATAGAGCTATA+TGG | + | chr6.3:8624461-8624480 | MS.gene86086:CDS | 35.0% | |
| TGTCAAGCTCAATATACGAA+TGG | - | chr6.3:8625696-8625715 | None:intergenic | 35.0% | |
| TTAAGGTCATCAAAAGAAGG+TGG | - | chr6.3:8624397-8624416 | None:intergenic | 35.0% | |
| TTATCATCTTACCATCTCGA+AGG | - | chr6.3:8625753-8625772 | None:intergenic | 35.0% | |
| TTGGTTTCAAGACATGGATT+AGG | + | chr6.3:8624364-8624383 | MS.gene86086:CDS | 35.0% | |
| TTGTTTGGTCAGTTCAATAG+AGG | + | chr6.3:8625146-8625165 | MS.gene86086:CDS | 35.0% | |
| ! | AAACAAAGCACTTTAACCAG+GGG | - | chr6.3:8625132-8625151 | None:intergenic | 35.0% |
| ! | ATAAATGGATTCCTGCACAT+TGG | + | chr6.3:8625627-8625646 | MS.gene86086:CDS | 35.0% |
| ! | ATAGATGTCGCAAGCTATTT+TGG | + | chr6.3:8626550-8626569 | MS.gene86086:intron | 35.0% |
| ! | CAAACAAAGCACTTTAACCA+GGG | - | chr6.3:8625133-8625152 | None:intergenic | 35.0% |
| ! | CCCTAGTACAATCTTCATTT+TGG | + | chr6.3:8626424-8626443 | MS.gene86086:intron | 35.0% |
| ! | CTCAATCTTAGCTCTTTCTT+CGG | - | chr6.3:8625540-8625559 | None:intergenic | 35.0% |
| ! | GACTCTTATATTTTGCTTGG+TGG | + | chr6.3:8628334-8628353 | MS.gene86086:intron | 35.0% |
| ! | GCATTCACCTTTTTAACAGT+TGG | + | chr6.3:8627811-8627830 | MS.gene86086:intron | 35.0% |
| ! | GCCAAAGAATGTTACTGATT+TGG | + | chr6.3:8623907-8623926 | MS.gene86086:CDS | 35.0% |
| ! | TCAATCTTAGCTCTTTCTTC+GGG | - | chr6.3:8625539-8625558 | None:intergenic | 35.0% |
| ! | TGGTTAAGAAGACTTTGAGA+GGG | + | chr6.3:8624251-8624270 | MS.gene86086:CDS | 35.0% |
| ! | TTATGCGTTTTTACGTCACT+TGG | + | chr6.3:8624009-8624028 | MS.gene86086:CDS | 35.0% |
| !! | AGGAATAGATTTGGTGAAAC+AGG | + | chr6.3:8624909-8624928 | MS.gene86086:CDS | 35.0% |
| !! | CCTTCTTTTGATGACCTTAA+AGG | + | chr6.3:8624397-8624416 | MS.gene86086:CDS | 35.0% |
| !! | CCTTTAAGGTCATCAAAAGA+AGG | - | chr6.3:8624400-8624419 | None:intergenic | 35.0% |
| !! | CTATTTTATTTGGTGGGTCA+AGG | + | chr6.3:8626721-8626740 | MS.gene86086:intron | 35.0% |
| !! | GATTCCTTTTCTGGAAATGA+TGG | + | chr6.3:8623863-8623882 | MS.gene86086:CDS | 35.0% |
| !! | GGAAGAAGTTAAGTTGACAA+GGG | + | chr6.3:8624432-8624451 | MS.gene86086:CDS | 35.0% |
| !! | GGAATAGATTTGGTGAAACA+GGG | + | chr6.3:8624910-8624929 | MS.gene86086:CDS | 35.0% |
| !! | GGAGTTGGTGAAAAAAGAAA+AGG | + | chr6.3:8624148-8624167 | MS.gene86086:CDS | 35.0% |
| !! | TTTCAGTTTTATGCCTCCAT+GGG | + | chr6.3:8625358-8625377 | MS.gene86086:intron | 35.0% |
| !! | TTTTCAGTTTTATGCCTCCA+TGG | + | chr6.3:8625357-8625376 | MS.gene86086:intron | 35.0% |
| !!! | AAAACTGGCTTTTAAGGCAA+TGG | - | chr6.3:8626929-8626948 | None:intergenic | 35.0% |
| !!! | CCCTCAATATTGCTTTTTCT+CGG | - | chr6.3:8625923-8625942 | None:intergenic | 35.0% |
| !!! | GAGCTTTTGTTTTGTTGTCT+TGG | + | chr6.3:8625300-8625319 | MS.gene86086:intron | 35.0% |
| !!! | GGTTTCCTCTGTCTTTTTTA+TGG | + | chr6.3:8627278-8627297 | MS.gene86086:intron | 35.0% |
| AAAAGAACAAGCCACTGTTG+TGG | + | chr6.3:8627465-8627484 | MS.gene86086:CDS | 40.0% | |
| AAAATAGCCTGCAGTATGCA+AGG | - | chr6.3:8625423-8625442 | None:intergenic | 40.0% | |
| AAACTAGGTACAGAGGACAA+TGG | - | chr6.3:8627737-8627756 | None:intergenic | 40.0% | |
| AAATAGCCTGCAGTATGCAA+GGG | - | chr6.3:8625422-8625441 | None:intergenic | 40.0% | |
| AAGTTCATGCCAAAACTAGC+TGG | + | chr6.3:8627945-8627964 | MS.gene86086:CDS | 40.0% | |
| AATGGTTTCTTCTCTTAGCG+TGG | - | chr6.3:8625846-8625865 | None:intergenic | 40.0% | |
| ACCAAGCTTATTTCCCAACA+TGG | - | chr6.3:8626863-8626882 | None:intergenic | 40.0% | |
| ACCATGTTGGGAAATAAGCT+TGG | + | chr6.3:8626859-8626878 | MS.gene86086:intron | 40.0% | |
| ACCTTGAGCATACTTTACCA+CGG | - | chr6.3:8627062-8627081 | None:intergenic | 40.0% | |
| AGCTTGACATGCAGTTCTTA+TGG | + | chr6.3:8625707-8625726 | MS.gene86086:CDS | 40.0% | |
| AGGTTCCATTTATGAGGCAT+TGG | + | chr6.3:8625179-8625198 | MS.gene86086:CDS | 40.0% | |
| AGGTTTAGATGTGGACAACT+TGG | + | chr6.3:8625982-8626001 | MS.gene86086:intron | 40.0% | |
| AGTTCATGCCAAAACTAGCT+GGG | + | chr6.3:8627946-8627965 | MS.gene86086:CDS | 40.0% | |
| ATTGTACTAGGGATTGGGAA+GGG | - | chr6.3:8626416-8626435 | None:intergenic | 40.0% | |
| CACAGGTATGGTTGAACAAA+AGG | + | chr6.3:8627845-8627864 | MS.gene86086:CDS | 40.0% | |
| CACTATAGTCCTGGATTTAG+AGG | + | chr6.3:8625458-8625477 | MS.gene86086:CDS | 40.0% | |
| CATTCAAAGCAGCAACACAA+AGG | - | chr6.3:8627002-8627021 | None:intergenic | 40.0% | |
| CCACAACATTGATCATCTTG+TGG | + | chr6.3:8627562-8627581 | MS.gene86086:intron | 40.0% | |
| CCACAAGATGATCAATGTTG+TGG | - | chr6.3:8627565-8627584 | None:intergenic | 40.0% | |
| CCCAAATATCACTATAGTCC+TGG | + | chr6.3:8625449-8625468 | MS.gene86086:CDS | 40.0% | |
| CGAAAAGGACTAGGTTGTAT+TGG | + | chr6.3:8624737-8624756 | MS.gene86086:CDS | 40.0% | |
| CGTTGATGCGTCAAATATGT+TGG | + | chr6.3:8624591-8624610 | MS.gene86086:CDS | 40.0% | |
| CTTGACATGCAGTTCTTATG+GGG | + | chr6.3:8625709-8625728 | MS.gene86086:CDS | 40.0% | |
| CTTGTATACCCTTGGTCAAA+TGG | + | chr6.3:8626960-8626979 | MS.gene86086:intron | 40.0% | |
| GAAAGAATTGGAGTGCGAAA+GGG | + | chr6.3:8627302-8627321 | MS.gene86086:intron | 40.0% | |
| GAAGTCAAGAACGTAAAGAG+TGG | - | chr6.3:8626394-8626413 | None:intergenic | 40.0% | |
| GAGAAGAATGTTCACATCCA+AGG | + | chr6.3:8624996-8625015 | MS.gene86086:CDS | 40.0% | |
| GATTTGAAAAGGAGGAGAGT+TGG | + | chr6.3:8624202-8624221 | MS.gene86086:CDS | 40.0% | |
| GCCGAGAAAAAGCAATATTG+AGG | + | chr6.3:8625919-8625938 | MS.gene86086:intron | 40.0% | |
| GCTGCATCTTACCTAACTTT+AGG | + | chr6.3:8624946-8624965 | MS.gene86086:CDS | 40.0% | |
| GCTTGACATGCAGTTCTTAT+GGG | + | chr6.3:8625708-8625727 | MS.gene86086:CDS | 40.0% | |
| GGTATGGTTGAACAAAAGGA+TGG | + | chr6.3:8627849-8627868 | MS.gene86086:CDS | 40.0% | |
| GGTTGTATTCATGAGAACGA+AGG | + | chr6.3:8624967-8624986 | MS.gene86086:CDS | 40.0% | |
| TATGTTCCTCTTCTTTGGGT+CGG | - | chr6.3:8624524-8624543 | None:intergenic | 40.0% | |
| TCAATTGTGTGTGTTGCACA+AGG | - | chr6.3:8624766-8624785 | None:intergenic | 40.0% | |
| TCATTAATGATCTCCCATGG+AGG | - | chr6.3:8625374-8625393 | None:intergenic | 40.0% | |
| TCTCATGATTCTGCTAAGTG+AGG | + | chr6.3:8627195-8627214 | MS.gene86086:intron | 40.0% | |
| TGAAAGAATTGGAGTGCGAA+AGG | + | chr6.3:8627301-8627320 | MS.gene86086:intron | 40.0% | |
| TTACCTTTCTGTGACACCTT+TGG | - | chr6.3:8625238-8625257 | None:intergenic | 40.0% | |
| TTCAGTTGTGACAGTTGGAA+CGG | + | chr6.3:8628087-8628106 | MS.gene86086:intron | 40.0% | |
| TTGACATGCAGTTCTTATGG+GGG | + | chr6.3:8625710-8625729 | MS.gene86086:CDS | 40.0% | |
| TTGCGTGATGAATATGCTAC+TGG | + | chr6.3:8626058-8626077 | MS.gene86086:intron | 40.0% | |
| TTGCTCCAATGCCTCATAAA+TGG | - | chr6.3:8625187-8625206 | None:intergenic | 40.0% | |
| ! | AAAGATGACAATTTCTGGGC+TGG | + | chr6.3:8628381-8628400 | MS.gene86086:CDS | 40.0% |
| ! | ACTGCATTGATCATGCTCAT+GGG | + | chr6.3:8627518-8627537 | MS.gene86086:CDS | 40.0% |
| ! | ATATGTCGAGGATGTGGTTT+TGG | + | chr6.3:8625059-8625078 | MS.gene86086:CDS | 40.0% |
| ! | CCAAACAAAGCACTTTAACC+AGG | - | chr6.3:8625134-8625153 | None:intergenic | 40.0% |
| ! | CCTGGTTAAAGTGCTTTGTT+TGG | + | chr6.3:8625131-8625150 | MS.gene86086:CDS | 40.0% |
| ! | GATAAAAGGGTGCACCATAA+TGG | + | chr6.3:8624486-8624505 | MS.gene86086:CDS | 40.0% |
| ! | GATAAACGGGCAGATTTTCT+GGG | + | chr6.3:8625578-8625597 | MS.gene86086:CDS | 40.0% |
| ! | GGTTAAGAAGACTTTGAGAG+GGG | + | chr6.3:8624252-8624271 | MS.gene86086:CDS | 40.0% |
| ! | TAAGTTGACAAGGGAAGCTT+TGG | + | chr6.3:8624441-8624460 | MS.gene86086:CDS | 40.0% |
| ! | TACGAGTCTTTTGCCTCAAA+TGG | - | chr6.3:8625864-8625883 | None:intergenic | 40.0% |
| ! | TGATTTGCAAGAGAGTCATG+AGG | + | chr6.3:8624114-8624133 | MS.gene86086:CDS | 40.0% |
| !! | ACAATTTCTGGGCTGGATTT+TGG | + | chr6.3:8628388-8628407 | MS.gene86086:CDS | 40.0% |
| !! | ACTGATTTGGTTATGGAGCA+TGG | + | chr6.3:8623920-8623939 | MS.gene86086:CDS | 40.0% |
| !! | CGGAAGAAGTTAAGTTGACA+AGG | + | chr6.3:8624431-8624450 | MS.gene86086:CDS | 40.0% |
| !! | TGTGAGTTGGTTTCAAGACA+TGG | + | chr6.3:8624358-8624377 | MS.gene86086:CDS | 40.0% |
| !! | TTTCCAAAGGTGTCACAGAA+AGG | + | chr6.3:8625232-8625251 | MS.gene86086:CDS | 40.0% |
| !! | TTTTAAAAGTGCACATCCCC+TGG | + | chr6.3:8625113-8625132 | MS.gene86086:CDS | 40.0% |
| !!! | AGCTCTGTTGATTCCTTTTC+TGG | + | chr6.3:8623854-8623873 | MS.gene86086:CDS | 40.0% |
| !!! | GAGCATGGTGTTTTAGTTGA+TGG | + | chr6.3:8623935-8623954 | MS.gene86086:CDS | 40.0% |
| AAAGGGAATGAAGTGGCTGT+TGG | + | chr6.3:8624166-8624185 | MS.gene86086:CDS | 45.0% | |
| AAGGGAATGAAGTGGCTGTT+GGG | + | chr6.3:8624167-8624186 | MS.gene86086:CDS | 45.0% | |
| AAGTGCAGCAAATTGCCCTT+CGG | + | chr6.3:8627033-8627052 | MS.gene86086:intron | 45.0% | |
| AATAGCCTGCAGTATGCAAG+GGG | - | chr6.3:8625421-8625440 | None:intergenic | 45.0% | |
| ACTTTACCACGGAAACCGAA+GGG | - | chr6.3:8627051-8627070 | None:intergenic | 45.0% | |
| AGATGTGGACAACTTGGACT+TGG | + | chr6.3:8625988-8626007 | MS.gene86086:intron | 45.0% | |
| AGCCACAGGTTCCATTTATG+AGG | + | chr6.3:8625173-8625192 | MS.gene86086:CDS | 45.0% | |
| AGGTACAGAGGACAATGGAT+TGG | - | chr6.3:8627732-8627751 | None:intergenic | 45.0% | |
| AGTTGCTGGTGAGATGTTGA+TGG | + | chr6.3:8624714-8624733 | MS.gene86086:CDS | 45.0% | |
| ATGGATTCCTGCACATTGGT+GGG | + | chr6.3:8625631-8625650 | MS.gene86086:CDS | 45.0% | |
| CATGAGCATGATCAATGCAG+TGG | - | chr6.3:8627519-8627538 | None:intergenic | 45.0% | |
| GAATGTTCACATCCAAGGAG+TGG | + | chr6.3:8625001-8625020 | MS.gene86086:CDS | 45.0% | |
| GAGGAATGGGAAATATGTCG+AGG | + | chr6.3:8625047-8625066 | MS.gene86086:CDS | 45.0% | |
| GATGTGGACAACTTGGACTT+GGG | + | chr6.3:8625989-8626008 | MS.gene86086:intron | 45.0% | |
| GATTGTACTAGGGATTGGGA+AGG | - | chr6.3:8626417-8626436 | None:intergenic | 45.0% | |
| GGTCCATCCATCAACCATTA+TGG | - | chr6.3:8624503-8624522 | None:intergenic | 45.0% | |
| TACTTTACCACGGAAACCGA+AGG | - | chr6.3:8627052-8627071 | None:intergenic | 45.0% | |
| TCATAAATGGAACCTGTGGC+TGG | - | chr6.3:8625174-8625193 | None:intergenic | 45.0% | |
| TCCGTGGTAAAGTATGCTCA+AGG | + | chr6.3:8627058-8627077 | MS.gene86086:intron | 45.0% | |
| TGCAAGAGAGTCATGAGGAA+GGG | + | chr6.3:8624119-8624138 | MS.gene86086:CDS | 45.0% | |
| TGCCTCATAAATGGAACCTG+TGG | - | chr6.3:8625178-8625197 | None:intergenic | 45.0% | |
| TGCGAAAGGGAATGCAGTAA+GGG | + | chr6.3:8627315-8627334 | MS.gene86086:intron | 45.0% | |
| TGGGAAATATGTCGAGGATG+TGG | + | chr6.3:8625053-8625072 | MS.gene86086:CDS | 45.0% | |
| TGTGATGACTACTTGTCTCG+CGG | + | chr6.3:8623983-8624002 | MS.gene86086:CDS | 45.0% | |
| TTCGGTTCAGTTGTGACAGT+TGG | + | chr6.3:8628082-8628101 | MS.gene86086:intron | 45.0% | |
| TTGCAAGAGAGTCATGAGGA+AGG | + | chr6.3:8624118-8624137 | MS.gene86086:CDS | 45.0% | |
| TTGGCATGAACTTCCTGATG+TGG | - | chr6.3:8627938-8627957 | None:intergenic | 45.0% | |
| ! | AATGGATTCCTGCACATTGG+TGG | + | chr6.3:8625630-8625649 | MS.gene86086:CDS | 45.0% |
| ! | CACTGCATTGATCATGCTCA+TGG | + | chr6.3:8627517-8627536 | MS.gene86086:CDS | 45.0% |
| ! | CGATAAACGGGCAGATTTTC+TGG | + | chr6.3:8625577-8625596 | MS.gene86086:CDS | 45.0% |
| ! | CTTAGCTCTTTCTTCGGGAT+CGG | - | chr6.3:8625534-8625553 | None:intergenic | 45.0% |
| ! | GTTGAAGTTTGTGAGGGTGT+TGG | + | chr6.3:8624055-8624074 | MS.gene86086:CDS | 45.0% |
| ! | TAATCAGAGTGCCTTCGAGA+TGG | + | chr6.3:8625739-8625758 | MS.gene86086:CDS | 45.0% |
| !! | GCACCATAATGGTTGATGGA+TGG | + | chr6.3:8624497-8624516 | MS.gene86086:CDS | 45.0% |
| !! | GTGAGATGTTGATGGCGAAA+AGG | + | chr6.3:8624722-8624741 | MS.gene86086:CDS | 45.0% |
| !! | TGTTGATGGCGAAAAGGACT+AGG | + | chr6.3:8624728-8624747 | MS.gene86086:CDS | 45.0% |
| !!! | AGGATGTGGTTTTGGACACA+CGG | + | chr6.3:8625067-8625086 | MS.gene86086:CDS | 45.0% |
| !!! | GGTTTTGGACACACGGTTTT+GGG | + | chr6.3:8625074-8625093 | MS.gene86086:CDS | 45.0% |
| !!! | TGGTTTTGGACACACGGTTT+TGG | + | chr6.3:8625073-8625092 | MS.gene86086:CDS | 45.0% |
| AAAACAGACCCAGCATGCAG+GGG | - | chr6.3:8628261-8628280 | None:intergenic | 50.0% | |
| AAACAGTCCCACCAATGTGC+AGG | - | chr6.3:8625641-8625660 | None:intergenic | 50.0% | |
| AAATTGCCCTTCGGTTTCCG+TGG | + | chr6.3:8627042-8627061 | MS.gene86086:intron | 50.0% | |
| AAGGGAATGCAGTAAGGGTG+AGG | + | chr6.3:8627320-8627339 | MS.gene86086:intron | 50.0% | |
| ACAAAACAGACCCAGCATGC+AGG | - | chr6.3:8628263-8628282 | None:intergenic | 50.0% | |
| ACCTTTGCACTCCACAACAG+TGG | - | chr6.3:8627479-8627498 | None:intergenic | 50.0% | |
| AGCACAGATCTGCACCATGT+TGG | + | chr6.3:8626846-8626865 | MS.gene86086:intron | 50.0% | |
| AGGTGAGAGAGGAAATGCTG+GGG | + | chr6.3:8624083-8624102 | MS.gene86086:CDS | 50.0% | |
| AGTTGGCGAAGACGAGGAAT+GGG | + | chr6.3:8625034-8625053 | MS.gene86086:CDS | 50.0% | |
| ATGCAGCTGAAGACCACATC+AGG | + | chr6.3:8627922-8627941 | MS.gene86086:CDS | 50.0% | |
| CAAAACAGACCCAGCATGCA+GGG | - | chr6.3:8628262-8628281 | None:intergenic | 50.0% | |
| CAAGGGCTTCTCTCATTCCT+CGG | + | chr6.3:8624869-8624888 | MS.gene86086:CDS | 50.0% | |
| CAATGACATACCGCTCGATG+CGG | + | chr6.3:8624309-8624328 | MS.gene86086:CDS | 50.0% | |
| CATGCCAAAACTAGCTGGGA+TGG | + | chr6.3:8627950-8627969 | MS.gene86086:CDS | 50.0% | |
| CCATTTATCAGCCGCCCTTA+CGG | - | chr6.3:8625615-8625634 | None:intergenic | 50.0% | |
| CGGTTGCAGCACTTCACTAA+AGG | + | chr6.3:8624889-8624908 | MS.gene86086:CDS | 50.0% | |
| GAGGTGAGAGAGGAAATGCT+GGG | + | chr6.3:8624082-8624101 | MS.gene86086:CDS | 50.0% | |
| GCACAGATCTGCACCATGTT+GGG | + | chr6.3:8626847-8626866 | MS.gene86086:intron | 50.0% | |
| GCAGTAAGGGTGAGGACTAT+CGG | + | chr6.3:8627328-8627347 | MS.gene86086:intron | 50.0% | |
| GCTGTGACTATCGTCTCTCA+AGG | + | chr6.3:8627117-8627136 | MS.gene86086:intron | 50.0% | |
| GGACAACTTGGACTTGGGTT+TGG | + | chr6.3:8625994-8626013 | MS.gene86086:intron | 50.0% | |
| GGGTGCACCATAATGGTTGA+TGG | + | chr6.3:8624493-8624512 | MS.gene86086:CDS | 50.0% | |
| GTGATGACTACTTGTCTCGC+GGG | + | chr6.3:8623984-8624003 | MS.gene86086:CDS | 50.0% | |
| GTGCGAAAGGGAATGCAGTA+AGG | + | chr6.3:8627314-8627333 | MS.gene86086:intron | 50.0% | |
| GTGTGAGACACTGAAAGCTG+AGG | + | chr6.3:8627899-8627918 | MS.gene86086:CDS | 50.0% | |
| TCACTCTTTACCGCATCGAG+CGG | - | chr6.3:8624322-8624341 | None:intergenic | 50.0% | |
| TGAGGTGAGAGAGGAAATGC+TGG | + | chr6.3:8624081-8624100 | MS.gene86086:CDS | 50.0% | |
| TGATGACTACTTGTCTCGCG+GGG | + | chr6.3:8623985-8624004 | MS.gene86086:CDS | 50.0% | |
| TGTTTCTTCCCCTGCATGCT+GGG | + | chr6.3:8628250-8628269 | MS.gene86086:intron | 50.0% | |
| TTACGTCACTTGGCTGGAAC+TGG | + | chr6.3:8624019-8624038 | MS.gene86086:CDS | 50.0% | |
| ! | AGTCATGAGGAAGGGTGTGT+TGG | + | chr6.3:8624127-8624146 | MS.gene86086:CDS | 50.0% |
| ! | GCACATTGGTGGGACTGTTT+TGG | + | chr6.3:8625641-8625660 | MS.gene86086:CDS | 50.0% |
| ! | GCGTTTTTACGTCACTTGGC+TGG | + | chr6.3:8624013-8624032 | MS.gene86086:CDS | 50.0% |
| ! | GGCATTGGAGCAAGCTAAAC+AGG | + | chr6.3:8625194-8625213 | MS.gene86086:CDS | 50.0% |
| ! | TGCATGCTGGGTCTGTTTTG+TGG | + | chr6.3:8628262-8628281 | MS.gene86086:intron | 50.0% |
| ! | TTGTTTCTTCCCCTGCATGC+TGG | + | chr6.3:8628249-8628268 | MS.gene86086:intron | 50.0% |
| !! | GCATCCATCCCAGCTAGTTT+TGG | - | chr6.3:8627957-8627976 | None:intergenic | 50.0% |
| !! | TGTTGGTGATGAGGTGAGAG+AGG | + | chr6.3:8624072-8624091 | MS.gene86086:CDS | 50.0% |
| !! | TTAGTGAAGTGCTGCAACCG+AGG | - | chr6.3:8624889-8624908 | None:intergenic | 50.0% |
| !! | TTGTGAGGGTGTTGGTGATG+AGG | + | chr6.3:8624063-8624082 | MS.gene86086:CDS | 50.0% |
| AAGCTTCTCGAGCGGTTGCA+AGG | + | chr6.3:8624275-8624294 | MS.gene86086:CDS | 55.0% | |
| CAGTTGGCGAAGACGAGGAA+TGG | + | chr6.3:8625033-8625052 | MS.gene86086:CDS | 55.0% | |
| CATTCCTCGTCTTCGCCAAC+TGG | - | chr6.3:8625035-8625054 | None:intergenic | 55.0% | |
| CCGTAAGGGCGGCTGATAAA+TGG | + | chr6.3:8625612-8625631 | MS.gene86086:CDS | 55.0% | |
| CTAGCTGGGATGGATGCTGT+TGG | + | chr6.3:8627960-8627979 | MS.gene86086:CDS | 55.0% | |
| GATGGACCGACCCAAAGAAG+AGG | + | chr6.3:8624515-8624534 | MS.gene86086:CDS | 55.0% | |
| GCCACTGTTGTGGAGTGCAA+AGG | + | chr6.3:8627475-8627494 | MS.gene86086:CDS | 55.0% | |
| TCAATAGAGGAGCCAGCCAC+AGG | + | chr6.3:8625159-8625178 | MS.gene86086:CDS | 55.0% | |
| ! | GAGGAAGGGTGTGTTGGAGT+TGG | + | chr6.3:8624133-8624152 | MS.gene86086:CDS | 55.0% |
| ATCAGCCGCCCTTACGGCTA+CGG | - | chr6.3:8625609-8625628 | None:intergenic | 60.0% | |
| CACAGCCCCTTGCATACTGC+AGG | + | chr6.3:8625413-8625432 | MS.gene86086:CDS | 60.0% | |
| CTGGCTGGACTTCCACTCCT+TGG | - | chr6.3:8625016-8625035 | None:intergenic | 60.0% | |
| GAGAGGGGAAGCTTCTCGAG+CGG | + | chr6.3:8624267-8624286 | MS.gene86086:CDS | 60.0% | |
| GGAGTGGAAGTCCAGCCAGT+TGG | + | chr6.3:8625017-8625036 | MS.gene86086:CDS | 60.0% | |
| GGGTGATCCCGTAGCCGTAA+GGG | + | chr6.3:8625598-8625617 | MS.gene86086:CDS | 60.0% | |
| TGATCCCGTAGCCGTAAGGG+CGG | + | chr6.3:8625601-8625620 | MS.gene86086:CDS | 60.0% | |
| TGGGTGATCCCGTAGCCGTA+AGG | + | chr6.3:8625597-8625616 | MS.gene86086:CDS | 60.0% | |
| CCAGCCAGTTGGCGAAGACG+AGG | + | chr6.3:8625028-8625047 | MS.gene86086:CDS | 65.0% | |
| CCTCGTCTTCGCCAACTGGC+TGG | - | chr6.3:8625031-8625050 | None:intergenic | 65.0% | |
| TCAGCCGCCCTTACGGCTAC+GGG | - | chr6.3:8625608-8625627 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 8623839 | 8628438 | 8623839 | ID=MS.gene86086 |
| chr6.3 | mRNA | 8623839 | 8628438 | 8623839 | ID=MS.gene86086.t1;Parent=MS.gene86086 |
| chr6.3 | exon | 8623839 | 8625253 | 8623839 | ID=MS.gene86086.t1.exon1;Parent=MS.gene86086.t1 |
| chr6.3 | CDS | 8623839 | 8625253 | 8623839 | ID=cds.MS.gene86086.t1;Parent=MS.gene86086.t1 |
| chr6.3 | exon | 8625364 | 8625760 | 8625364 | ID=MS.gene86086.t1.exon2;Parent=MS.gene86086.t1 |
| chr6.3 | CDS | 8625364 | 8625760 | 8625364 | ID=cds.MS.gene86086.t1;Parent=MS.gene86086.t1 |
| chr6.3 | exon | 8627460 | 8627539 | 8627460 | ID=MS.gene86086.t1.exon3;Parent=MS.gene86086.t1 |
| chr6.3 | CDS | 8627460 | 8627539 | 8627460 | ID=cds.MS.gene86086.t1;Parent=MS.gene86086.t1 |
| chr6.3 | exon | 8627830 | 8627981 | 8627830 | ID=MS.gene86086.t1.exon4;Parent=MS.gene86086.t1 |
| chr6.3 | CDS | 8627830 | 8627981 | 8627830 | ID=cds.MS.gene86086.t1;Parent=MS.gene86086.t1 |
| chr6.3 | exon | 8628371 | 8628438 | 8628371 | ID=MS.gene86086.t1.exon5;Parent=MS.gene86086.t1 |
| chr6.3 | CDS | 8628371 | 8628438 | 8628371 | ID=cds.MS.gene86086.t1;Parent=MS.gene86086.t1 |
| Gene Sequence |
| Protein sequence |
