AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013063.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013063.01.T01 MTR_3g037230 72.523 222 7 2 181 402 266 433 1.31e-101 308
MsG0380013063.01.T01 MTR_3g037230 100.000 79 0 0 94 172 1 79 4.20e-41 150
MsG0380013063.01.T01 MTR_3g037230 72.523 222 7 2 181 402 313 480 6.05e-101 308
MsG0380013063.01.T01 MTR_3g037230 72.674 172 1 1 1 172 1 126 2.32e-69 226
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013063.01.T01 AT1G18660 48.430 223 59 4 181 402 319 486 1.41e-59 201
MsG0380013063.01.T01 AT1G18660 55.385 130 54 2 54 182 17 143 7.70e-35 134
MsG0380013063.01.T01 AT1G18660 48.430 223 59 4 181 402 319 486 1.41e-59 201
MsG0380013063.01.T01 AT1G18660 55.385 130 54 2 54 182 17 143 7.70e-35 134
MsG0380013063.01.T01 AT1G18660 48.430 223 59 4 181 402 319 486 1.41e-59 201
MsG0380013063.01.T01 AT1G18660 55.385 130 54 2 54 182 17 143 7.70e-35 134
MsG0380013063.01.T01 AT1G18660 46.569 204 53 4 181 383 319 467 9.44e-49 172
MsG0380013063.01.T01 AT1G18660 55.385 130 54 2 54 182 17 143 7.41e-35 135

Find 83 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACTAGATTTGATGTTAT+TGG 0.166078 3:+29703520 None:intergenic
TTTCTTACTGTCATTGTAAA+TGG 0.198028 3:-29705510 MsG0380013063.01.T01:CDS
TCTCTTTCCTTTGTCCCTTC+TGG 0.260718 3:+29698717 None:intergenic
GCTTGTACAAAAGGGAAATT+TGG 0.299572 3:-29704647 MsG0380013063.01.T01:CDS
GAAGGCTAATGCTCTTCTTC+TGG 0.306462 3:-29703083 MsG0380013063.01.T01:intron
TTAAGATTTGGTTTGGTTGC+AGG 0.310296 3:-29704719 MsG0380013063.01.T01:intron
ATGATCTATGCATTAAATAT+TGG 0.333748 3:+29703322 None:intergenic
GATTTCGCAACCTCCGTTCT+TGG 0.338175 3:-29698883 MsG0380013063.01.T01:CDS
ACAGGTTCATTAGCAGAGTT+TGG 0.343388 3:-29699683 MsG0380013063.01.T01:CDS
ATCGAAGTGCAGCTTATATT+AGG 0.345900 3:-29703481 MsG0380013063.01.T01:intron
CTTCGATTGCCGAGGATGAT+TGG 0.368141 3:+29703497 None:intergenic
TTGGTTTGGTTGCAGGATAA+TGG 0.370188 3:-29704712 MsG0380013063.01.T01:CDS
TTGAATGCAATCACATGTTT+TGG 0.370492 3:+29705399 None:intergenic
CGACGTCGACGACTACGTTT+TGG 0.374689 3:-29706724 MsG0380013063.01.T01:intron
GGGAGTCTTAAGATTTGGTT+TGG 0.395439 3:-29704726 MsG0380013063.01.T01:intron
ATTTCGCAACCTCCGTTCTT+GGG 0.404243 3:-29698882 MsG0380013063.01.T01:CDS
GTGTCCCATGACAATCCTTC+TGG 0.406472 3:+29704688 None:intergenic
ACCATTTCAGCTGGGTTTGA+AGG 0.425497 3:-29703158 MsG0380013063.01.T01:intron
GAGAAACTCGTGAATGTTGA+AGG 0.427907 3:-29697921 MsG0380013063.01.T01:CDS
TGTTTACGAGCTTGTACAAA+AGG 0.436112 3:-29704656 MsG0380013063.01.T01:CDS
GTTATAATAGATGCTTCAAC+AGG 0.438756 3:-29699701 MsG0380013063.01.T01:CDS
CCTCTATAAAAGCGACCATC+TGG 0.438796 3:+29699502 None:intergenic
CATGATTATGTACAGATTGA+AGG 0.446466 3:-29698914 MsG0380013063.01.T01:CDS
CTTCTGATAGAAGGCGTGTC+TGG 0.462130 3:-29705453 MsG0380013063.01.T01:CDS
GTCGTCGACGTCGAGAGAAT+CGG 0.472876 3:+29706734 None:intergenic
CCTCTGCTCGAAGAAATATC+AGG 0.480531 3:+29697444 None:intergenic
GCATTAGCCTTCAAAAGGTA+TGG 0.481312 3:+29703094 None:intergenic
TCGTAGGCCTTCAGAAAGAT+TGG 0.481468 3:-29697740 MsG0380013063.01.T01:CDS
GAAGAGCATTAGCCTTCAAA+AGG 0.485021 3:+29703089 None:intergenic
GCACTGACCCTTCTGATAGA+AGG 0.485576 3:-29705462 MsG0380013063.01.T01:CDS
TTCCATTCTGTTGTCTCGAA+AGG 0.487885 3:+29704624 None:intergenic
TGCAGAAGTTGAATGGATAC+AGG 0.501411 3:-29698751 MsG0380013063.01.T01:CDS
ATCGTGTTGCAGAAGTTGAA+TGG 0.503817 3:-29698758 MsG0380013063.01.T01:CDS
ACATACTTCGGCAAGTGTTG+TGG 0.508681 3:+29703260 None:intergenic
CATACTTCGGCAAGTGTTGT+GGG 0.526024 3:+29703261 None:intergenic
CTGAAGGCCTACGATTCGAG+AGG 0.527619 3:+29697749 None:intergenic
GTTTACGAGCTTGTACAAAA+GGG 0.530579 3:-29704655 MsG0380013063.01.T01:CDS
CTTTCCTTTGTCCCTTCTGG+CGG 0.530881 3:+29698720 None:intergenic
CAGCAGAAAGTGCTCGAACA+TGG 0.534893 3:-29698080 MsG0380013063.01.T01:CDS
CTCCGTTCTTGGGATCAAGA+TGG 0.535243 3:-29698872 MsG0380013063.01.T01:CDS
GCGCTCGGGGTCTCTTAATG+AGG 0.539035 3:+29697890 None:intergenic
TCCGTTCTTGGGATCAAGAT+GGG 0.539331 3:-29698871 MsG0380013063.01.T01:intron
TCGCTACCCTCTCGAATCGT+AGG 0.543915 3:-29697756 MsG0380013063.01.T01:CDS
GAAAGTGCTCGAACATGGAT+AGG 0.552863 3:-29698075 MsG0380013063.01.T01:CDS
GAAGGATGCTGCAAAGCTTG+TGG 0.558715 3:-29703140 MsG0380013063.01.T01:CDS
TAAAAGCGACCATCTGGAAG+TGG 0.559854 3:+29699508 None:intergenic
ACATATTCCAGATGGTCTTG+AGG 0.562851 3:-29699142 MsG0380013063.01.T01:intron
GTGGGATCAAGCCCACTCAA+TGG 0.562899 3:+29703279 None:intergenic
AGCAGAGTTTGGCTGTGAAG+TGG 0.562998 3:-29699672 MsG0380013063.01.T01:CDS
CATCATCATCCTCAGAACAT+AGG 0.564721 3:-29703302 MsG0380013063.01.T01:CDS
TCGAGACAACAGAATGGAAG+AGG 0.566392 3:-29704620 MsG0380013063.01.T01:intron
CAGGATATTATGCCGCCAGA+AGG 0.576127 3:-29698732 MsG0380013063.01.T01:CDS
CGCTCGGGGTCTCTTAATGA+GGG 0.578663 3:+29697891 None:intergenic
CCTGATATTTCTTCGAGCAG+AGG 0.586318 3:-29697444 MsG0380013063.01.T01:CDS
CTGTAGTATCTCTAATGCGT+AGG 0.595814 3:+29697713 None:intergenic
AGGATATTATGCCGCCAGAA+GGG 0.596091 3:-29698731 MsG0380013063.01.T01:CDS
ATGGACCAGAAGGATTGTCA+TGG 0.596967 3:-29704693 MsG0380013063.01.T01:CDS
TTGCAGGATAATGGACCAGA+AGG 0.597081 3:-29704703 MsG0380013063.01.T01:CDS
GCTAAAGAAGCAGCAAGACA+AGG 0.598996 3:-29698048 MsG0380013063.01.T01:intron
CAGACACGCCTTCTATCAGA+AGG 0.601458 3:+29705454 None:intergenic
GGCCTTTCGAGACAACAGAA+TGG 0.602857 3:-29704626 MsG0380013063.01.T01:CDS
AGAAGGGACAAAGGAAAGAG+AGG 0.605280 3:-29698715 MsG0380013063.01.T01:CDS
AGGAGATCCAATCTTTCTGA+AGG 0.606145 3:+29697733 None:intergenic
ACCCATCTTGATCCCAAGAA+CGG 0.606671 3:+29698870 None:intergenic
TTTCTTCGAGCAGAGGAACA+AGG 0.608592 3:-29697437 MsG0380013063.01.T01:CDS
AGAATCGGAAGGAGGTTGAG+TGG 0.612077 3:+29706749 None:intergenic
TCTAGTGATCCAATCATCCT+CGG 0.612986 3:-29703506 MsG0380013063.01.T01:CDS
TATGCCGCCAGAAGGGACAA+AGG 0.618241 3:-29698724 MsG0380013063.01.T01:CDS
AGGTGTGAGCCACTTCCAGA+TGG 0.625380 3:-29699517 MsG0380013063.01.T01:CDS
TGGACCAGAAGGATTGTCAT+GGG 0.629901 3:-29704692 MsG0380013063.01.T01:CDS
ATGTACAGATTGAAGGTCGT+AGG 0.631279 3:-29698907 MsG0380013063.01.T01:CDS
ACTCAATGGCCTATGTTCTG+AGG 0.635518 3:+29703293 None:intergenic
CAGAAGGGTCAGTGCGACTG+AGG 0.642492 3:+29705470 None:intergenic
TCAGAACATAGGCCATTGAG+TGG 0.644909 3:-29703291 MsG0380013063.01.T01:CDS
TGAAGGCCTACGATTCGAGA+GGG 0.654293 3:+29697750 None:intergenic
ACGTCGAGAGAATCGGAAGG+AGG 0.657020 3:+29706741 None:intergenic
TCGACGTCGAGAGAATCGGA+AGG 0.674517 3:+29706738 None:intergenic
CAGAACATAGGCCATTGAGT+GGG 0.678923 3:-29703290 MsG0380013063.01.T01:CDS
AAGCTGCACTTCGATTGCCG+AGG 0.702323 3:+29703489 None:intergenic
AGACACGCCTTCTATCAGAA+GGG 0.714561 3:+29705455 None:intergenic
TTCTTGTAGAGAATTAGACG+AGG 0.721915 3:-29697467 MsG0380013063.01.T01:intron
CATCTTGATCCCAAGAACGG+AGG 0.722655 3:+29698873 None:intergenic
ACGCATTAGAGATACTACAG+AGG 0.789082 3:-29697710 MsG0380013063.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATGATGTAAAATTTAT+TGG + Chr3:29703842-29703861 None:intergenic 10.0%
!! AATATGATGTAAAATTTATT+GGG + Chr3:29703841-29703860 None:intergenic 10.0%
!! AGTTAAAAATAATAAGAAAA+AGG + Chr3:29698569-29698588 None:intergenic 10.0%
!! ATTAAATCTGTAAAAAAAAA+AGG + Chr3:29706592-29706611 None:intergenic 10.0%
!!! AAATTTATTTTTTTCTTACT+AGG - Chr3:29701189-29701208 MsG0380013063.01.T01:intron 10.0%
!!! ATTAATACTAACATTTTAAT+CGG + Chr3:29699766-29699785 None:intergenic 10.0%
!!! TCAATATTTTTCTTTTAAAT+TGG - Chr3:29700726-29700745 MsG0380013063.01.T01:intron 10.0%
!! AAAAAAAAAGAGAGAAAAAA+AGG + Chr3:29698416-29698435 None:intergenic 15.0%
!! AAATAGTTATTGGTATTAAT+AGG + Chr3:29705685-29705704 None:intergenic 15.0%
!! AATAGTTATTGGTATTAATA+GGG + Chr3:29705684-29705703 None:intergenic 15.0%
!! ATATAACTTAAACAAGAAAA+TGG + Chr3:29704396-29704415 None:intergenic 15.0%
!! TTAAAATGTTAGTATTAATC+CGG - Chr3:29699767-29699786 MsG0380013063.01.T01:intron 15.0%
!! TTAATTAAATAAACCTAGTA+AGG - Chr3:29706607-29706626 MsG0380013063.01.T01:intron 15.0%
!!! TGAATTTTTTTCTCAAAAAA+AGG + Chr3:29705601-29705620 None:intergenic 15.0%
!!! TTATTGAATTTTTTTCTCAT+GGG - Chr3:29704293-29704312 MsG0380013063.01.T01:intron 15.0%
!!! TTTCTAAAACAAAAATATCA+GGG + Chr3:29701171-29701190 None:intergenic 15.0%
!!! TTTTCTAAAACAAAAATATC+AGG + Chr3:29701172-29701191 None:intergenic 15.0%
!! AAAAAAGGTGGTTATAAATA+AGG + Chr3:29705586-29705605 None:intergenic 20.0%
!! AAAAGAATAAAAAATGTTGC+TGG + Chr3:29699665-29699684 None:intergenic 20.0%
!! AAATTGTGTATTTAATGCAT+TGG + Chr3:29702974-29702993 None:intergenic 20.0%
!! AACTAAGTATATGTTTGAAT+TGG + Chr3:29697687-29697706 None:intergenic 20.0%
!! AACTATATATGTAATGCTTA+TGG + Chr3:29700314-29700333 None:intergenic 20.0%
!! AATAATGCATACAACATTAA+GGG + Chr3:29705984-29706003 None:intergenic 20.0%
!! AATATTAATACAGCTATTCT+AGG - Chr3:29706634-29706653 MsG0380013063.01.T01:intron 20.0%
!! AATTTCATAAAGAGATATCA+AGG - Chr3:29700530-29700549 MsG0380013063.01.T01:intron 20.0%
!! AATTTGTGATTCAATAACAA+TGG - Chr3:29699208-29699227 MsG0380013063.01.T01:intron 20.0%
!! ACGTAGTAATATATATACAA+TGG - Chr3:29701931-29701950 MsG0380013063.01.T01:intron 20.0%
!! AGAATAGCTGTATTAATATT+TGG + Chr3:29706634-29706653 None:intergenic 20.0%
!! AGATTCATTAACTTATGAAA+TGG - Chr3:29699917-29699936 MsG0380013063.01.T01:intron 20.0%
!! ATAGAGGTAAAAAATTTAAC+TGG - Chr3:29704688-29704707 MsG0380013063.01.T01:CDS 20.0%
!! ATAGTTATTGGTATTAATAG+GGG + Chr3:29705683-29705702 None:intergenic 20.0%
!! ATGATCTATGCATTAAATAT+TGG + Chr3:29700855-29700874 None:intergenic 20.0%
!! ATTTGTGATTCAATAACAAT+GGG - Chr3:29699209-29699228 MsG0380013063.01.T01:intron 20.0%
!! CATGAAACATTAAGATATAA+AGG + Chr3:29705391-29705410 None:intergenic 20.0%
!! CATTAAATAATAAACCATTG+AGG + Chr3:29705936-29705955 None:intergenic 20.0%
!! CGTAGTAATATATATACAAT+GGG - Chr3:29701932-29701951 MsG0380013063.01.T01:intron 20.0%
!! CGTATTAAACAATCAATTTA+AGG + Chr3:29698200-29698219 None:intergenic 20.0%
!! GAAGGAATAATTACTAAATT+GGG + Chr3:29702929-29702948 None:intergenic 20.0%
!! GCAATATTTCACAATAATAA+GGG + Chr3:29697919-29697938 None:intergenic 20.0%
!! GTTATAGAATATATGGTTAT+TGG - Chr3:29698309-29698328 MsG0380013063.01.T01:intron 20.0%
!! TAAAAATATATTCTACTGCA+TGG - Chr3:29704631-29704650 MsG0380013063.01.T01:CDS 20.0%
!! TAAATAATGAATCAGTCTAA+TGG + Chr3:29703304-29703323 None:intergenic 20.0%
!! TAATAATGCATACAACATTA+AGG + Chr3:29705985-29706004 None:intergenic 20.0%
!! TGAAGGAATAATTACTAAAT+TGG + Chr3:29702930-29702949 None:intergenic 20.0%
!! TGTATCTAGTAATTTGAATT+CGG + Chr3:29705638-29705657 None:intergenic 20.0%
!!! AAAACAAAGAAATTGATTCA+AGG + Chr3:29702853-29702872 None:intergenic 20.0%
!!! AAAATAGTGTGCTTTATTTT+TGG - Chr3:29699582-29699601 MsG0380013063.01.T01:intron 20.0%
!!! AAACAAATAAACATTTTCTC+TGG - Chr3:29699427-29699446 MsG0380013063.01.T01:intron 20.0%
!!! AAATTCATGTCTAATTCTTT+TGG - Chr3:29703754-29703773 MsG0380013063.01.T01:intron 20.0%
!!! AACAAATAAACATTTTCTCT+GGG - Chr3:29699428-29699447 MsG0380013063.01.T01:intron 20.0%
!!! AACATATACTTAGTTTTGTT+TGG - Chr3:29697692-29697711 MsG0380013063.01.T01:intron 20.0%
!!! ACATGAATTTTTTTTTCCTT+TGG + Chr3:29703744-29703763 None:intergenic 20.0%
!!! AGAAGTATTTAATTGATTCT+AGG - Chr3:29698162-29698181 MsG0380013063.01.T01:intron 20.0%
!!! ATAATCATGATTTGTTTTGA+AGG + Chr3:29705249-29705268 None:intergenic 20.0%
!!! ATGTTGATTATATTTTCCAT+AGG - Chr3:29702605-29702624 MsG0380013063.01.T01:intron 20.0%
!!! ATTATTGTTCTCATTTGTTA+GGG - Chr3:29702654-29702673 MsG0380013063.01.T01:intron 20.0%
!!! ATTTGTACAGAAGATATTTT+AGG - Chr3:29705733-29705752 MsG0380013063.01.T01:intron 20.0%
!!! ATTTTTTTCTCAAAAAAAGG+TGG + Chr3:29705598-29705617 None:intergenic 20.0%
!!! CAATTTTGAGCTATAAATAA+TGG + Chr3:29704073-29704092 None:intergenic 20.0%
!!! CAGTATTTTTTTGCTATAAT+TGG - Chr3:29700216-29700235 MsG0380013063.01.T01:intron 20.0%
!!! CTTATTGAATTTTTTTCTCA+TGG - Chr3:29704292-29704311 MsG0380013063.01.T01:intron 20.0%
!!! GTTTTTCTTGTTATAGTTTA+TGG - Chr3:29702740-29702759 MsG0380013063.01.T01:intron 20.0%
!!! TACGTAAATATGTGTTTTAA+CGG - Chr3:29698216-29698235 MsG0380013063.01.T01:intron 20.0%
!!! TAGCTTTATGTCAAAAATTT+GGG - Chr3:29699964-29699983 MsG0380013063.01.T01:intron 20.0%
!!! TAGTTCTAATACTTTTGAAT+AGG - Chr3:29701660-29701679 MsG0380013063.01.T01:intron 20.0%
!!! TATTTGAGACTATTTTTTTC+AGG + Chr3:29704560-29704579 None:intergenic 20.0%
!!! TCATTTTGCAAAATAGTTAT+TGG + Chr3:29705695-29705714 None:intergenic 20.0%
!!! TGTTTTCTTGTTATAGTTTA+TGG - Chr3:29702867-29702886 MsG0380013063.01.T01:intron 20.0%
!!! TTATTTTTTTCTTACTAGGT+GGG - Chr3:29701193-29701212 MsG0380013063.01.T01:intron 20.0%
!!! TTCAAACATCTAATTTTTCA+AGG + Chr3:29705896-29705915 None:intergenic 20.0%
!!! TTCTAAAACAAAAATATCAG+GGG + Chr3:29701170-29701189 None:intergenic 20.0%
!!! TTTATTTTTTTCTTACTAGG+TGG - Chr3:29701192-29701211 MsG0380013063.01.T01:intron 20.0%
! AAAACGGTAAAGAAGAATAA+TGG - Chr3:29704319-29704338 MsG0380013063.01.T01:intron 25.0%
! AAACATAAACGAACAGATTA+TGG - Chr3:29699824-29699843 MsG0380013063.01.T01:intron 25.0%
! AAACGCATTCTATATAATAC+TGG + Chr3:29700147-29700166 None:intergenic 25.0%
! AACAAGAAAATGGAAAGAAA+TGG + Chr3:29704386-29704405 None:intergenic 25.0%
! ACAGTCAGTTAATACTAATT+TGG - Chr3:29704171-29704190 MsG0380013063.01.T01:intron 25.0%
! ACATAAATGAACAGATTATG+AGG - Chr3:29699849-29699868 MsG0380013063.01.T01:intron 25.0%
! ACATATCTCATTCTTACAAA+TGG - Chr3:29701636-29701655 MsG0380013063.01.T01:intron 25.0%
! ACATTGTGACATCTAAATTT+GGG + Chr3:29702804-29702823 None:intergenic 25.0%
! ACCTAACAATTAAAAGTCAA+AGG + Chr3:29698498-29698517 None:intergenic 25.0%
! AGGAACATTTGTATACAAAA+TGG - Chr3:29705753-29705772 MsG0380013063.01.T01:intron 25.0%
! AGGAAGATTAAATAAATGCA+TGG + Chr3:29700069-29700088 None:intergenic 25.0%
! AGTTAATAGGAACAGAAATT+AGG + Chr3:29703333-29703352 None:intergenic 25.0%
! ATCACTAGATTTGATGTTAT+TGG + Chr3:29700657-29700676 None:intergenic 25.0%
! ATCTTTGCGATTATTTATTC+AGG - Chr3:29700610-29700629 MsG0380013063.01.T01:intron 25.0%
! ATGGTTTCAAAGTTGAATAT+GGG - Chr3:29698441-29698460 MsG0380013063.01.T01:intron 25.0%
! ATGTAAGTTCACTTTAATTC+TGG - Chr3:29705482-29705501 MsG0380013063.01.T01:CDS 25.0%
! ATGTCAAAAATTTGGGAAAA+GGG - Chr3:29699971-29699990 MsG0380013063.01.T01:intron 25.0%
! ATTAACTTATGAAATGGAAG+TGG - Chr3:29699923-29699942 MsG0380013063.01.T01:intron 25.0%
! ATTAATATTTGGTCCTTACT+AGG + Chr3:29706623-29706642 None:intergenic 25.0%
! ATTGATAGAGATATGTTAGA+GGG + Chr3:29703782-29703801 None:intergenic 25.0%
! CAATTCCAGTAACTAAAATA+AGG + Chr3:29706064-29706083 None:intergenic 25.0%
! CAGTCAGTTAATACTAATTT+GGG - Chr3:29704172-29704191 MsG0380013063.01.T01:intron 25.0%
! CATGATGTATAAACAAATCT+AGG + Chr3:29706173-29706192 None:intergenic 25.0%
! CCTAACAATTAAAAGTCAAA+GGG + Chr3:29698497-29698516 None:intergenic 25.0%
! CGCAATATTTCACAATAATA+AGG + Chr3:29697920-29697939 None:intergenic 25.0%
! CTAATAATCAACCAAACAAA+TGG - Chr3:29701716-29701735 MsG0380013063.01.T01:intron 25.0%
! CTTATTATACATATTCCAGA+TGG - Chr3:29705024-29705043 MsG0380013063.01.T01:intron 25.0%
! CTTTATGAAATTCTACAAGT+AGG + Chr3:29700522-29700541 None:intergenic 25.0%
! GAAATATTGCGTTTGAAAAA+CGG - Chr3:29697929-29697948 MsG0380013063.01.T01:CDS 25.0%
! GATTATTGTTCTCATTTGTT+AGG - Chr3:29702653-29702672 MsG0380013063.01.T01:intron 25.0%
! GGAAGATTAAATAAATGCAT+GGG + Chr3:29700068-29700087 None:intergenic 25.0%
! GTATCTAGTAATTTGAATTC+GGG + Chr3:29705637-29705656 None:intergenic 25.0%
! GTGATTCAAGAGAATAATAA+GGG - Chr3:29701406-29701425 MsG0380013063.01.T01:intron 25.0%
! GTGCTTATTAAATGAATGTT+TGG - Chr3:29698044-29698063 MsG0380013063.01.T01:intron 25.0%
! TAAAAGTCAAAGGGATATTA+AGG + Chr3:29698488-29698507 None:intergenic 25.0%
! TACATTGTGACATCTAAATT+TGG + Chr3:29702805-29702824 None:intergenic 25.0%
! TATATAGTTTAGTACTTCTG+AGG + Chr3:29706205-29706224 None:intergenic 25.0%
! TATGGTTTCAAAGTTGAATA+TGG - Chr3:29698440-29698459 MsG0380013063.01.T01:intron 25.0%
! TATGTCAAAAATTTGGGAAA+AGG - Chr3:29699970-29699989 MsG0380013063.01.T01:intron 25.0%
! TCCATTTAGTTAGTGATAAA+AGG - Chr3:29704224-29704243 MsG0380013063.01.T01:intron 25.0%
! TCTTTGCCAAAATTTGAAAA+CGG - Chr3:29705867-29705886 MsG0380013063.01.T01:intron 25.0%
! TGATTCAAGAGAATAATAAG+GGG - Chr3:29701407-29701426 MsG0380013063.01.T01:intron 25.0%
! TGATTGGAAAATGTTATCAT+TGG + Chr3:29700825-29700844 None:intergenic 25.0%
! TTAAATAAATGCATGGGTAA+AGG + Chr3:29700062-29700081 None:intergenic 25.0%
! TTAACTTATGAAATGGAAGT+GGG - Chr3:29699924-29699943 MsG0380013063.01.T01:intron 25.0%
! TTAGAGTTTCAACAAAATCA+CGG - Chr3:29697626-29697645 MsG0380013063.01.T01:intron 25.0%
! TTGACTTTGTAAACATCATT+TGG + Chr3:29699121-29699140 None:intergenic 25.0%
! TTGAGTGTTTCAAACATAAT+GGG + Chr3:29699387-29699406 None:intergenic 25.0%
! TTTACCACTATTGGAAATAT+AGG - Chr3:29702292-29702311 MsG0380013063.01.T01:intron 25.0%
! TTTCTTACTGTCATTGTAAA+TGG - Chr3:29698664-29698683 MsG0380013063.01.T01:intron 25.0%
! TTTGAGTGTTTCAAACATAA+TGG + Chr3:29699388-29699407 None:intergenic 25.0%
!! AAGCAAAGCTCTTTTATATT+TGG + Chr3:29699077-29699096 None:intergenic 25.0%
!! AATGATAACATTTTCCAATC+AGG - Chr3:29700824-29700843 MsG0380013063.01.T01:intron 25.0%
!! ACCTTTTATCACTAACTAAA+TGG + Chr3:29704228-29704247 None:intergenic 25.0%
!! ATAACTCATTTTACCACTAT+TGG - Chr3:29702283-29702302 MsG0380013063.01.T01:intron 25.0%
!! ATAACTTTTGTGAAACTACT+TGG + Chr3:29697891-29697910 None:intergenic 25.0%
!! ATGTTTTCATCATGATGTAT+TGG + Chr3:29699810-29699829 None:intergenic 25.0%
!! ATTATGTTTGAAACACTCAA+AGG - Chr3:29699387-29699406 MsG0380013063.01.T01:intron 25.0%
!! GAAAAACAAGAAATTGATTC+AGG + Chr3:29702727-29702746 None:intergenic 25.0%
!! GATTCTGGAAAATAATTGAA+TGG - Chr3:29704028-29704047 MsG0380013063.01.T01:intron 25.0%
!! GCTAATTTGTAAAAGTATGT+AGG - Chr3:29698641-29698660 MsG0380013063.01.T01:intron 25.0%
!! GTTGTATTTAAAATCACAGA+AGG + Chr3:29701559-29701578 None:intergenic 25.0%
!! TCAAATGCTTTCTCTTTTAA+AGG - Chr3:29701242-29701261 MsG0380013063.01.T01:intron 25.0%
!! TGAAAAACACTTCTCAATTT+TGG - Chr3:29700466-29700485 MsG0380013063.01.T01:intron 25.0%
!! TGCATTATTTATGATTTGTG+TGG - Chr3:29704717-29704736 MsG0380013063.01.T01:CDS 25.0%
!! TGTTTTCATCATGATGTATT+GGG + Chr3:29699809-29699828 None:intergenic 25.0%
!! TTTTTCTCATGGGAAAAAAA+CGG - Chr3:29704303-29704322 MsG0380013063.01.T01:intron 25.0%
!!! AAAAAACTATCACGGTTTTT+TGG - Chr3:29697541-29697560 MsG0380013063.01.T01:intron 25.0%
!!! ACGTAAATATGTGTTTTAAC+GGG - Chr3:29698217-29698236 MsG0380013063.01.T01:intron 25.0%
!!! CTCTCTTTTTTTTTTGTGTA+TGG - Chr3:29698422-29698441 MsG0380013063.01.T01:intron 25.0%
!!! GTAGCTTTATGTCAAAAATT+TGG - Chr3:29699963-29699982 MsG0380013063.01.T01:intron 25.0%
!!! TATTTTTTTCTTACTAGGTG+GGG - Chr3:29701194-29701213 MsG0380013063.01.T01:intron 25.0%
!!! TGTAATAGTTGACTTTTTGA+AGG + Chr3:29702947-29702966 None:intergenic 25.0%
!!! TTGTACCTTATTTTAGTTAC+TGG - Chr3:29706056-29706075 MsG0380013063.01.T01:intron 25.0%
AAACAAATCTAGGTGAACAA+TGG + Chr3:29706163-29706182 None:intergenic 30.0%
AACAAAGTGTAGATAGTGAA+AGG - Chr3:29699282-29699301 MsG0380013063.01.T01:intron 30.0%
AAGTCCTTTAATACCTACAA+TGG - Chr3:29703211-29703230 MsG0380013063.01.T01:intron 30.0%
AATACTGGATAGACATAACA+GGG + Chr3:29700132-29700151 None:intergenic 30.0%
AATCTTCCTATGCAAAATAC+AGG - Chr3:29700080-29700099 MsG0380013063.01.T01:intron 30.0%
AATGACAGTTTAGTCAACAT+TGG - Chr3:29703425-29703444 MsG0380013063.01.T01:intron 30.0%
AATGTCTTGAATGTGAAAGT+TGG - Chr3:29703597-29703616 MsG0380013063.01.T01:intron 30.0%
ACACAGATTAAGGATTTGAT+TGG - Chr3:29701513-29701532 MsG0380013063.01.T01:intron 30.0%
ACATATCCCATAGTTTATAG+TGG - Chr3:29703048-29703067 MsG0380013063.01.T01:intron 30.0%
ACATCTTGCATATTGATCTA+AGG + Chr3:29705845-29705864 None:intergenic 30.0%
ACTCAAACTAATAAAAGCGA+AGG + Chr3:29699313-29699332 None:intergenic 30.0%
ACTTCATGTGAGACTATATT+TGG + Chr3:29704840-29704859 None:intergenic 30.0%
AGAAAAGTAACCAGAAATTG+AGG + Chr3:29699245-29699264 None:intergenic 30.0%
AGAAGCGATTGATACAAAAA+AGG + Chr3:29704814-29704833 None:intergenic 30.0%
AGATGAGAAGATATTTCATG+TGG + Chr3:29704598-29704617 None:intergenic 30.0%
AGGAATTATTCCATACATAC+AGG - Chr3:29700550-29700569 MsG0380013063.01.T01:intron 30.0%
AGTCCTTTAATACCTACAAT+GGG - Chr3:29703212-29703231 MsG0380013063.01.T01:intron 30.0%
ATAATCGCAAAGATCAACAT+TGG + Chr3:29700604-29700623 None:intergenic 30.0%
ATACCCATTGTAGGTATTAA+AGG + Chr3:29703218-29703237 None:intergenic 30.0%
ATTTAGTGGAAACTTTGACA+GGG + Chr3:29703491-29703510 None:intergenic 30.0%
ATTTCACAATAATAAGGGCA+TGG + Chr3:29697914-29697933 None:intergenic 30.0%
CATATCCCATAGTTTATAGT+GGG - Chr3:29703049-29703068 MsG0380013063.01.T01:intron 30.0%
CATATCTCTATCAATCTTCT+TGG - Chr3:29703787-29703806 MsG0380013063.01.T01:intron 30.0%
CATCATCATGATATAAAAGC+AGG + Chr3:29702115-29702134 None:intergenic 30.0%
CATGATTATGTACAGATTGA+AGG - Chr3:29705260-29705279 MsG0380013063.01.T01:intron 30.0%
CGAGGTTCAAATATATTTAG+TGG + Chr3:29703505-29703524 None:intergenic 30.0%
CTATCTACACTTTGTTACTA+CGG + Chr3:29699278-29699297 None:intergenic 30.0%
CTCTACGCAAAATGTATTAT+GGG - Chr3:29699687-29699706 MsG0380013063.01.T01:CDS 30.0%
CTTTGCCAAAATTTGAAAAC+GGG - Chr3:29705868-29705887 MsG0380013063.01.T01:intron 30.0%
GAAAACATATGATCTGTGTT+AGG - Chr3:29702627-29702646 MsG0380013063.01.T01:intron 30.0%
GAATTATTCCATACATACAG+GGG - Chr3:29700552-29700571 MsG0380013063.01.T01:intron 30.0%
GAATTCGATCGAAATTTCTA+AGG + Chr3:29705170-29705189 None:intergenic 30.0%
GATGAGAAGATATTTCATGT+GGG + Chr3:29704597-29704616 None:intergenic 30.0%
GATTGATAGAGATATGTTAG+AGG + Chr3:29703783-29703802 None:intergenic 30.0%
GATTTGTCTATTGATCTTCT+AGG - Chr3:29704451-29704470 MsG0380013063.01.T01:intron 30.0%
GCTGGATAAAAGAAATATTC+TGG - Chr3:29703926-29703945 MsG0380013063.01.T01:intron 30.0%
GGAATTATTCCATACATACA+GGG - Chr3:29700551-29700570 MsG0380013063.01.T01:intron 30.0%
GGATATAGTTACACAGATTA+AGG - Chr3:29701503-29701522 MsG0380013063.01.T01:intron 30.0%
GGTATTAATAGGGGTTTATT+TGG + Chr3:29705674-29705693 None:intergenic 30.0%
GGTGATTCAAGAGAATAATA+AGG - Chr3:29701405-29701424 MsG0380013063.01.T01:intron 30.0%
GTATATAATTTCCATGTGTC+AGG - Chr3:29703813-29703832 MsG0380013063.01.T01:intron 30.0%
GTATATGTACAAATGTGAAG+AGG + Chr3:29701765-29701784 None:intergenic 30.0%
GTTATAATAGATGCTTCAAC+AGG - Chr3:29704473-29704492 MsG0380013063.01.T01:intron 30.0%
TAACTAAACATGTGTCATGT+CGG + Chr3:29698922-29698941 None:intergenic 30.0%
TAATACTGGATAGACATAAC+AGG + Chr3:29700133-29700152 None:intergenic 30.0%
TAGAACAACTTGTGAAAATG+AGG - Chr3:29697819-29697838 MsG0380013063.01.T01:intron 30.0%
TAGCAATTGTTACATGGTAA+AGG - Chr3:29703964-29703983 MsG0380013063.01.T01:intron 30.0%
TAGCTCAAAATTGCAACATT+TGG - Chr3:29704080-29704099 MsG0380013063.01.T01:intron 30.0%
TATCAAATGCAATGAAACAG+TGG + Chr3:29702370-29702389 None:intergenic 30.0%
TATCATGTAGTAATTCCCTT+CGG - Chr3:29702388-29702407 MsG0380013063.01.T01:intron 30.0%
TATTTAGTGGAAACTTTGAC+AGG + Chr3:29703492-29703511 None:intergenic 30.0%
TCAACCTATATTTCCAATAG+TGG + Chr3:29702299-29702318 None:intergenic 30.0%
TCAACGCGTTATAGAATATA+TGG - Chr3:29698302-29698321 MsG0380013063.01.T01:intron 30.0%
TCACGAATTCGAACTATAAT+AGG - Chr3:29703080-29703099 MsG0380013063.01.T01:intron 30.0%
TCACTTATGTTAAAATCCTC+TGG + Chr3:29698138-29698157 None:intergenic 30.0%
TCTCTACGCAAAATGTATTA+TGG - Chr3:29699686-29699705 MsG0380013063.01.T01:CDS 30.0%
TGATCCAATAGAACATACTT+CGG + Chr3:29700929-29700948 None:intergenic 30.0%
TGCTTAGATTTCCTATAAGT+TGG - Chr3:29705954-29705973 MsG0380013063.01.T01:intron 30.0%
TGTAACAATTGCTAAAACTC+AGG + Chr3:29703958-29703977 None:intergenic 30.0%
TTCATGTCTATTTCAGTCAA+TGG - Chr3:29702562-29702581 MsG0380013063.01.T01:intron 30.0%
TTGACTGAAATAGACATGAA+CGG + Chr3:29702562-29702581 None:intergenic 30.0%
TTGATGGAAGCTAAATGAAT+TGG - Chr3:29700282-29700301 MsG0380013063.01.T01:intron 30.0%
! AAATATTGGCTAATCCTGAT+TGG + Chr3:29700841-29700860 None:intergenic 30.0%
! AACCATTGAGGATTTTCAAT+TGG + Chr3:29705924-29705943 None:intergenic 30.0%
! ACAGATCATATGTTTTCCTA+TGG + Chr3:29702624-29702643 None:intergenic 30.0%
! ACCATTGAGGATTTTCAATT+GGG + Chr3:29705923-29705942 None:intergenic 30.0%
! AGATCTGAAGCAAAACTATT+TGG + Chr3:29700781-29700800 None:intergenic 30.0%
! AGTAAAACCATACCTTTTGA+AGG - Chr3:29701073-29701092 MsG0380013063.01.T01:intron 30.0%
! ATTTATGATTTGTGTGGATG+AGG - Chr3:29704723-29704742 MsG0380013063.01.T01:intron 30.0%
! ATTTGAAACACCTAGCTAAA+TGG + Chr3:29701228-29701247 None:intergenic 30.0%
! GATCTCTTTGGTAGTTTATA+GGG - Chr3:29701141-29701160 MsG0380013063.01.T01:intron 30.0%
! TAAAGACCTGTATTTTGCAT+AGG + Chr3:29700089-29700108 None:intergenic 30.0%
! TGATCTCTTTGGTAGTTTAT+AGG - Chr3:29701140-29701159 MsG0380013063.01.T01:intron 30.0%
! TTATTTTCCAGAATCCAATC+AGG + Chr3:29704023-29704042 None:intergenic 30.0%
! TTCTTTTATCCAGCTTACAA+CGG + Chr3:29703920-29703939 None:intergenic 30.0%
! TTGAATGCAATCACATGTTT+TGG + Chr3:29698778-29698797 None:intergenic 30.0%
! TTGAATTCGGGTTATATTGA+GGG + Chr3:29705625-29705644 None:intergenic 30.0%
! TTGATTCACATGTCTTTTCT+TGG - Chr3:29700254-29700273 MsG0380013063.01.T01:intron 30.0%
! TTTGAATTCGGGTTATATTG+AGG + Chr3:29705626-29705645 None:intergenic 30.0%
! TTTTAAATACAACCCCTGTA+TGG - Chr3:29701566-29701585 MsG0380013063.01.T01:intron 30.0%
!! ATGTTTTATTGAGTGAGCAT+AGG + Chr3:29699183-29699202 None:intergenic 30.0%
!! ATTTTACTTTTCGTCACAGT+TGG - Chr3:29705112-29705131 MsG0380013063.01.T01:intron 30.0%
!! CCCTTTGACTTTTAATTGTT+AGG - Chr3:29698494-29698513 MsG0380013063.01.T01:intron 30.0%
!! GAGTTTTAGCAATTGTTACA+TGG - Chr3:29703958-29703977 MsG0380013063.01.T01:intron 30.0%
!! GGATTGGTTATTTGGTTATT+TGG - Chr3:29705133-29705152 MsG0380013063.01.T01:intron 30.0%
!!! ATTTTTTTCTTACTAGGTGG+GGG - Chr3:29701195-29701214 MsG0380013063.01.T01:intron 30.0%
!!! CTATCATATGCTTTTTCCAA+AGG - Chr3:29703725-29703744 MsG0380013063.01.T01:intron 30.0%
!!! GTCTGTTCACTTTTTTTTTG+TGG - Chr3:29700405-29700424 MsG0380013063.01.T01:intron 30.0%
!!! TAAAATGTTTTGACTGACCA+TGG - Chr3:29705792-29705811 MsG0380013063.01.T01:intron 30.0%
!!! TTGGTGATTAGTTTTCCTTT+CGG - Chr3:29703616-29703635 MsG0380013063.01.T01:intron 30.0%
!!! TTTACACGTGTTTTTTGAAG+CGG - Chr3:29697603-29697622 MsG0380013063.01.T01:intron 30.0%
!!! TTTTTTGCGTCACATTTTCT+CGG + Chr3:29697527-29697546 None:intergenic 30.0%
AAACCCAAGAATCACTGTAA+AGG + Chr3:29701691-29701710 None:intergenic 35.0%
AACCATCCCACTATAAACTA+TGG + Chr3:29703058-29703077 None:intergenic 35.0%
AACTTCCCTTTCTCGAAAAA+TGG + Chr3:29704779-29704798 None:intergenic 35.0%
AAGAGAATAATAAGGGGAAG+TGG - Chr3:29701413-29701432 MsG0380013063.01.T01:intron 35.0%
ACAACATCCATGACAAAAAG+AGG + Chr3:29703464-29703483 None:intergenic 35.0%
ACCATCCCACTATAAACTAT+GGG + Chr3:29703057-29703076 None:intergenic 35.0%
AGCAAAAAAGTAGACTGCAA+TGG + Chr3:29701980-29701999 None:intergenic 35.0%
AGGGATATTAAGGTAACAAG+AGG + Chr3:29698478-29698497 None:intergenic 35.0%
AGTGCAGCTTATATTAGGTT+AGG - Chr3:29700698-29700717 MsG0380013063.01.T01:intron 35.0%
ATATTCTATAACGCGTTGAG+TGG + Chr3:29698301-29698320 None:intergenic 35.0%
ATATTTCATGTGGGAAAGGA+GGG + Chr3:29704588-29704607 None:intergenic 35.0%
ATCATGTAGTAATTCCCTTC+GGG - Chr3:29702389-29702408 MsG0380013063.01.T01:intron 35.0%
ATCGAAGTGCAGCTTATATT+AGG - Chr3:29700693-29700712 MsG0380013063.01.T01:intron 35.0%
ATGAAATAGGTACAGACACA+AGG + Chr3:29701333-29701352 None:intergenic 35.0%
ATTGTGTCATATGACCATAC+AGG + Chr3:29701583-29701602 None:intergenic 35.0%
ATTGTTAGGTGTGAAATCCA+AGG - Chr3:29698508-29698527 MsG0380013063.01.T01:intron 35.0%
CAAAAATTACCAGACCTGAT+TGG - Chr3:29704006-29704025 MsG0380013063.01.T01:intron 35.0%
CAAAATTGCAACATTTGGAG+AGG - Chr3:29704085-29704104 MsG0380013063.01.T01:intron 35.0%
CAACATCCATGACAAAAAGA+GGG + Chr3:29703463-29703482 None:intergenic 35.0%
CATACAAAAGAACTTTCCAG+AGG - Chr3:29703379-29703398 MsG0380013063.01.T01:intron 35.0%
GAAGATATTTCATGTGGGAA+AGG + Chr3:29704592-29704611 None:intergenic 35.0%
GAAGCTAAATGAATTGGTGT+TGG - Chr3:29700288-29700307 MsG0380013063.01.T01:intron 35.0%
GAGAAACAAGAGTGAAGATA+AGG + Chr3:29702089-29702108 None:intergenic 35.0%
GCAAAAAAGTAGACTGCAAT+GGG + Chr3:29701979-29701998 None:intergenic 35.0%
GCACACTAAATGACTAGTAA+AGG + Chr3:29702338-29702357 None:intergenic 35.0%
GCTTGTACAAAAGGGAAATT+TGG - Chr3:29699527-29699546 MsG0380013063.01.T01:intron 35.0%
GTGAATGTGCAATACCTAAA+AGG + Chr3:29702240-29702259 None:intergenic 35.0%
GTTATAGACTTATGGTGAGT+TGG - Chr3:29703524-29703543 MsG0380013063.01.T01:CDS 35.0%
GTTTACGAGCTTGTACAAAA+GGG - Chr3:29699519-29699538 MsG0380013063.01.T01:intron 35.0%
TAAATGCTTGTGTATGAGCT+TGG - Chr3:29701880-29701899 MsG0380013063.01.T01:intron 35.0%
TAATGCTCTTCTTCTGGTAA+GGG - Chr3:29701097-29701116 MsG0380013063.01.T01:intron 35.0%
TAGCTGTGGTGAAAATCTAA+TGG - Chr3:29698983-29699002 MsG0380013063.01.T01:CDS 35.0%
TATATTCTACTGCATGGTGT+AGG - Chr3:29704637-29704656 MsG0380013063.01.T01:CDS 35.0%
TCAAATTTCCCCTGTATGTA+TGG + Chr3:29700563-29700582 None:intergenic 35.0%
TCCCAATTGAAAATCCTCAA+TGG - Chr3:29705919-29705938 MsG0380013063.01.T01:intron 35.0%
TCGAGTGACATAAGTGATTA+TGG - Chr3:29698075-29698094 MsG0380013063.01.T01:CDS 35.0%
TGAACCTCGTTATAGACTTA+TGG - Chr3:29703516-29703535 MsG0380013063.01.T01:CDS 35.0%
TGTAACTGCATAAACCAATG+TGG + Chr3:29704960-29704979 None:intergenic 35.0%
TGTGACGCAAAAAACTATCA+CGG - Chr3:29697533-29697552 MsG0380013063.01.T01:intron 35.0%
TGTGTCTGTACCTATTTCAT+GGG - Chr3:29701333-29701352 MsG0380013063.01.T01:intron 35.0%
TGTTTACGAGCTTGTACAAA+AGG - Chr3:29699518-29699537 MsG0380013063.01.T01:CDS 35.0%
TTAAGGGTCATCCAACTTAT+AGG + Chr3:29705968-29705987 None:intergenic 35.0%
TTACTCGATGCTCACAATTA+CGG + Chr3:29699336-29699355 None:intergenic 35.0%
TTATGTGCACTGTTCTCATA+TGG - Chr3:29704920-29704939 MsG0380013063.01.T01:intron 35.0%
TTCTTGTAGAGAATTAGACG+AGG - Chr3:29706707-29706726 MsG0380013063.01.T01:intron 35.0%
TTGGAAAAATCCAACCACAT+TGG - Chr3:29704943-29704962 MsG0380013063.01.T01:intron 35.0%
TTGTGTCATATGACCATACA+GGG + Chr3:29701582-29701601 None:intergenic 35.0%
TTGTGTCTGTACCTATTTCA+TGG - Chr3:29701332-29701351 MsG0380013063.01.T01:intron 35.0%
TTGTTCTCACTTGATCTCTT+TGG - Chr3:29701129-29701148 MsG0380013063.01.T01:intron 35.0%
TTTCATCATGATGTATTGGG+AGG + Chr3:29699806-29699825 None:intergenic 35.0%
! AAATCTTGTATGACTAGCTG+TGG - Chr3:29698969-29698988 MsG0380013063.01.T01:CDS 35.0%
! AAATTGCTTCACCCTGTTTT+TGG - Chr3:29702044-29702063 MsG0380013063.01.T01:intron 35.0%
! ACACTTCTCAATTTTGGATG+AGG - Chr3:29700472-29700491 MsG0380013063.01.T01:intron 35.0%
! ACAGTATCATCTAGTTCAAC+TGG - Chr3:29702431-29702450 MsG0380013063.01.T01:intron 35.0%
! AGGTTCCCGTTTTCAAATTT+TGG + Chr3:29705876-29705895 None:intergenic 35.0%
! ATAGTTTTTCCGTTGTAAGC+TGG - Chr3:29703908-29703927 MsG0380013063.01.T01:intron 35.0%
! ATTGATTCAAGGCTACGATT+TGG + Chr3:29702842-29702861 None:intergenic 35.0%
! CAATTGTCTGAAACTCTGAA+TGG - Chr3:29704259-29704278 MsG0380013063.01.T01:intron 35.0%
! CACTTCTCAATTTTGGATGA+GGG - Chr3:29700473-29700492 MsG0380013063.01.T01:intron 35.0%
! CAGTATCATCTAGTTCAACT+GGG - Chr3:29702432-29702451 MsG0380013063.01.T01:intron 35.0%
! CGGTAAAGAAGAATAATGGA+AGG - Chr3:29704323-29704342 MsG0380013063.01.T01:intron 35.0%
! GAATAATGGAAGGCAATCAT+CGG - Chr3:29704333-29704352 MsG0380013063.01.T01:intron 35.0%
! GAGTTGTTCAAGTTAAGAGT+CGG - Chr3:29705072-29705091 MsG0380013063.01.T01:intron 35.0%
! GTTTGAAACACTCAAAGGAA+TGG - Chr3:29699392-29699411 MsG0380013063.01.T01:intron 35.0%
! TATCTTTTGCAGCTAATCCA+TGG + Chr3:29705812-29705831 None:intergenic 35.0%
! TCTTTTCTTGGTCTGTTTGA+TGG - Chr3:29700266-29700285 MsG0380013063.01.T01:intron 35.0%
! TGAATTCGGGTTATATTGAG+GGG + Chr3:29705624-29705643 None:intergenic 35.0%
! TGTTTCAAACATAATGGGAC+AGG + Chr3:29699382-29699401 None:intergenic 35.0%
! TTTTTCTGTATCATGAGCTG+TGG - Chr3:29698598-29698617 MsG0380013063.01.T01:intron 35.0%
!! AGATATGTACAAGTACCGAA+AGG + Chr3:29703634-29703653 None:intergenic 35.0%
!! ATGGTTTTACTGAACTGCTT+TGG + Chr3:29701064-29701083 None:intergenic 35.0%
!! TCACAGTTGGATTGGTTATT+TGG - Chr3:29705125-29705144 MsG0380013063.01.T01:intron 35.0%
!! TTAAGATTTGGTTTGGTTGC+AGG - Chr3:29699455-29699474 MsG0380013063.01.T01:intron 35.0%
!! TTGATTTTGACACGTTTGAG+TGG - Chr3:29698108-29698127 MsG0380013063.01.T01:intron 35.0%
!!! GACTTCAAGTTGATCCTTTT+AGG - Chr3:29702223-29702242 MsG0380013063.01.T01:intron 35.0%
!!! GCTTTCCATTTTTCGAGAAA+GGG - Chr3:29704771-29704790 MsG0380013063.01.T01:intron 35.0%
!!! TGCTTTCCATTTTTCGAGAA+AGG - Chr3:29704770-29704789 MsG0380013063.01.T01:intron 35.0%
AAATAGGTACAGACACAAGG+TGG + Chr3:29701330-29701349 None:intergenic 40.0%
AAATCACACACAGTGACAGA+TGG + Chr3:29704436-29704455 None:intergenic 40.0%
AAGAAATCCTCAAGACCATC+TGG + Chr3:29705042-29705061 None:intergenic 40.0%
AATACACTTGACTGCATCCA+CGG + Chr3:29700021-29700040 None:intergenic 40.0%
AATAGGTACAGACACAAGGT+GGG + Chr3:29701329-29701348 None:intergenic 40.0%
AATAGTAGCTGCTAGCATGT+AGG - Chr3:29701481-29701500 MsG0380013063.01.T01:intron 40.0%
ACAGGTTCATTAGCAGAGTT+TGG - Chr3:29704491-29704510 MsG0380013063.01.T01:intron 40.0%
ACGCATTAGAGATACTACAG+AGG - Chr3:29706464-29706483 MsG0380013063.01.T01:intron 40.0%
ACTGCATAAACCAATGTGGT+TGG + Chr3:29704956-29704975 None:intergenic 40.0%
AGCACCTTTACAGTGATTCT+TGG - Chr3:29701684-29701703 MsG0380013063.01.T01:intron 40.0%
AGGAGATCCAATCTTTCTGA+AGG + Chr3:29706444-29706463 None:intergenic 40.0%
AGGCTTCTTCATAATCACAG+TGG + Chr3:29701745-29701764 None:intergenic 40.0%
ATAGTAGCTGCTAGCATGTA+GGG - Chr3:29701482-29701501 MsG0380013063.01.T01:intron 40.0%
ATCGTGTTGCAGAAGTTGAA+TGG - Chr3:29705416-29705435 MsG0380013063.01.T01:CDS 40.0%
ATGGACAAAGGCCAAAAACA+GGG + Chr3:29702058-29702077 None:intergenic 40.0%
ATGGGGAACTCTTGAATGTA+GGG - Chr3:29701351-29701370 MsG0380013063.01.T01:intron 40.0%
ATGTACAGATTGAAGGTCGT+AGG - Chr3:29705267-29705286 MsG0380013063.01.T01:intron 40.0%
CAAGTCACAATACCCATTGT+AGG + Chr3:29703227-29703246 None:intergenic 40.0%
CACAGTGGTAACCATTTGTT+TGG + Chr3:29701730-29701749 None:intergenic 40.0%
CAGGTTCATACAGTATCTTC+AGG + Chr3:29702511-29702530 None:intergenic 40.0%
CATAGGAGGTAGATTGTGAT+CGG - Chr3:29705535-29705554 MsG0380013063.01.T01:intron 40.0%
CATCATCATCCTCAGAACAT+AGG - Chr3:29700872-29700891 MsG0380013063.01.T01:intron 40.0%
CATTTCCTTGTAAGCCGTAT+AGG - Chr3:29705509-29705528 MsG0380013063.01.T01:CDS 40.0%
CTAATGCTCTTCTTCTGGTA+AGG - Chr3:29701096-29701115 MsG0380013063.01.T01:intron 40.0%
CTATTTCAGTCAATGGATCG+TGG - Chr3:29702569-29702588 MsG0380013063.01.T01:intron 40.0%
CTCACCATAAGTCTATAACG+AGG + Chr3:29703523-29703542 None:intergenic 40.0%
CTCTCACAATCCTCAATTTC+TGG - Chr3:29699232-29699251 MsG0380013063.01.T01:intron 40.0%
CTCTTGAATCACCATAACAC+AGG + Chr3:29701398-29701417 None:intergenic 40.0%
CTGTAGTATCTCTAATGCGT+AGG + Chr3:29706464-29706483 None:intergenic 40.0%
CTTGCCGAAGTATGTTCTAT+TGG - Chr3:29700922-29700941 MsG0380013063.01.T01:intron 40.0%
GAAATCACAGAGTAAGTGCT+TGG - Chr3:29704524-29704543 MsG0380013063.01.T01:intron 40.0%
GAGAAACTCGTGAATGTTGA+AGG - Chr3:29706253-29706272 MsG0380013063.01.T01:intron 40.0%
GATATTTCATGTGGGAAAGG+AGG + Chr3:29704589-29704608 None:intergenic 40.0%
GCACAAAACTAAACACGCAT+CGG + Chr3:29698028-29698047 None:intergenic 40.0%
GCACCTTTACAGTGATTCTT+GGG - Chr3:29701685-29701704 MsG0380013063.01.T01:intron 40.0%
GCAGTTAGAGAAATATGACG+TGG - Chr3:29702179-29702198 MsG0380013063.01.T01:intron 40.0%
GTGTCTGTACCTATTTCATG+GGG - Chr3:29701334-29701353 MsG0380013063.01.T01:intron 40.0%
TAAACATGTGTCATGTCGGA+AGG + Chr3:29698918-29698937 None:intergenic 40.0%
TACCTCCTATGAAGCCTATA+CGG + Chr3:29705526-29705545 None:intergenic 40.0%
TAGAGAAATATGACGTGGCT+CGG - Chr3:29702184-29702203 MsG0380013063.01.T01:intron 40.0%
TCAAGAGTTCCCCATGAAAT+AGG + Chr3:29701346-29701365 None:intergenic 40.0%
TCACACTAGCAGCAGTTAAT+AGG + Chr3:29703346-29703365 None:intergenic 40.0%
TCTAGTGATCCAATCATCCT+CGG - Chr3:29700668-29700687 MsG0380013063.01.T01:intron 40.0%
TCTTGACAACCATTTCAGCT+GGG - Chr3:29701008-29701027 MsG0380013063.01.T01:intron 40.0%
TGCAGAAGTTGAATGGATAC+AGG - Chr3:29705423-29705442 MsG0380013063.01.T01:CDS 40.0%
TGTGTCATATGACCATACAG+GGG + Chr3:29701581-29701600 None:intergenic 40.0%
TTCCAGAGGAATATGCTGAA+AGG - Chr3:29703393-29703412 MsG0380013063.01.T01:intron 40.0%
TTCCATTCTGTTGTCTCGAA+AGG + Chr3:29699553-29699572 None:intergenic 40.0%
TTCCTTTCAGCATATTCCTC+TGG + Chr3:29703398-29703417 None:intergenic 40.0%
TTCTTGACAACCATTTCAGC+TGG - Chr3:29701007-29701026 MsG0380013063.01.T01:intron 40.0%
TTTATTGGGTTCCTGACACA+TGG + Chr3:29703827-29703846 None:intergenic 40.0%
! AAGTTAAGAGTCGGTGTTCA+TGG - Chr3:29705081-29705100 MsG0380013063.01.T01:intron 40.0%
! ACATATTCCAGATGGTCTTG+AGG - Chr3:29705032-29705051 MsG0380013063.01.T01:intron 40.0%
! ACTTTTCGTCACAGTTGGAT+TGG - Chr3:29705117-29705136 MsG0380013063.01.T01:intron 40.0%
! AGAAATTGATTCAGGCTCTG+TGG + Chr3:29702719-29702738 None:intergenic 40.0%
! GAAATTGATTCAGGCTCTGT+GGG + Chr3:29702718-29702737 None:intergenic 40.0%
! GGGAGTCTTAAGATTTGGTT+TGG - Chr3:29699448-29699467 MsG0380013063.01.T01:intron 40.0%
! GGGTTGATTTCCATTTAGCT+AGG - Chr3:29701215-29701234 MsG0380013063.01.T01:intron 40.0%
! TATCATCTAGTTCAACTGGG+AGG - Chr3:29702435-29702454 MsG0380013063.01.T01:intron 40.0%
! TATGCTCCCTCTTTTTGTCA+TGG - Chr3:29703454-29703473 MsG0380013063.01.T01:intron 40.0%
! TCCCATAGTTTATAGTGGGA+TGG - Chr3:29703053-29703072 MsG0380013063.01.T01:intron 40.0%
! TCTCAATTTTGGATGAGGGA+TGG - Chr3:29700477-29700496 MsG0380013063.01.T01:intron 40.0%
! TCTCTGGGAGTCTTAAGATT+TGG - Chr3:29699443-29699462 MsG0380013063.01.T01:intron 40.0%
!! GAAGAGCATTAGCCTTCAAA+AGG + Chr3:29701088-29701107 None:intergenic 40.0%
!! GAATGCTTAGAGAAGTGCTA+TGG + Chr3:29703706-29703725 None:intergenic 40.0%
!! GCATTAGCCTTCAAAAGGTA+TGG + Chr3:29701083-29701102 None:intergenic 40.0%
!! TTGGTTTGGTTGCAGGATAA+TGG - Chr3:29699462-29699481 MsG0380013063.01.T01:intron 40.0%
!!! ACTATCACGGTTTTTTGGAC+TGG - Chr3:29697546-29697565 MsG0380013063.01.T01:intron 40.0%
!!! AGACTGTCATTTTCTCTCCT+TGG + Chr3:29698528-29698547 None:intergenic 40.0%
AAGATGGGTGAGTTGTCTCT+CGG - Chr3:29705318-29705337 MsG0380013063.01.T01:intron 45.0%
AATGGAAGGCAATCATCGGA+TGG - Chr3:29704337-29704356 MsG0380013063.01.T01:intron 45.0%
ACCATTTCAGCTGGGTTTGA+AGG - Chr3:29701016-29701035 MsG0380013063.01.T01:intron 45.0%
ACCCATCTTGATCCCAAGAA+CGG + Chr3:29705307-29705326 None:intergenic 45.0%
ACGGCAAAATGAATGTCCAC+AGG + Chr3:29702543-29702562 None:intergenic 45.0%
ACTCAATGGCCTATGTTCTG+AGG + Chr3:29700884-29700903 None:intergenic 45.0%
AGAAGGGACAAAGGAAAGAG+AGG - Chr3:29705459-29705478 MsG0380013063.01.T01:CDS 45.0%
AGACACGCCTTCTATCAGAA+GGG + Chr3:29698722-29698741 None:intergenic 45.0%
AGAGAAATATGACGTGGCTC+GGG - Chr3:29702185-29702204 MsG0380013063.01.T01:intron 45.0%
AGGATATTATGCCGCCAGAA+GGG - Chr3:29705443-29705462 MsG0380013063.01.T01:CDS 45.0%
ATGGAAGGCAATCATCGGAT+GGG - Chr3:29704338-29704357 MsG0380013063.01.T01:intron 45.0%
ATGGACCAGAAGGATTGTCA+TGG - Chr3:29699481-29699500 MsG0380013063.01.T01:intron 45.0%
ATGTTAACAGATTGCCCCCA+GGG + Chr3:29703032-29703051 None:intergenic 45.0%
ATTCACCTCAACTAGCGACA+TGG + Chr3:29701303-29701322 None:intergenic 45.0%
ATTTCGCAACCTCCGTTCTT+GGG - Chr3:29705292-29705311 MsG0380013063.01.T01:intron 45.0%
CACACAGTGACAGATGGATA+TGG + Chr3:29704430-29704449 None:intergenic 45.0%
CAGAACATAGGCCATTGAGT+GGG - Chr3:29700884-29700903 MsG0380013063.01.T01:intron 45.0%
CATGGACAAAGGCCAAAAAC+AGG + Chr3:29702059-29702078 None:intergenic 45.0%
CATGGGGAACTCTTGAATGT+AGG - Chr3:29701350-29701369 MsG0380013063.01.T01:intron 45.0%
CCTCTATAAAAGCGACCATC+TGG + Chr3:29704675-29704694 None:intergenic 45.0%
CCTCTGCTCGAAGAAATATC+AGG + Chr3:29706733-29706752 None:intergenic 45.0%
CCTGATATTTCTTCGAGCAG+AGG - Chr3:29706730-29706749 MsG0380013063.01.T01:CDS 45.0%
CGCATTTGTTTCCACAATCG+CGG - Chr3:29697970-29697989 MsG0380013063.01.T01:intron 45.0%
CGGCAAAATGAATGTCCACA+GGG + Chr3:29702542-29702561 None:intergenic 45.0%
CTAAACACGCATCGGAATCA+AGG + Chr3:29698020-29698039 None:intergenic 45.0%
GAAGGCTAATGCTCTTCTTC+TGG - Chr3:29701091-29701110 MsG0380013063.01.T01:intron 45.0%
GCAAAATGAATGTCCACAGG+GGG + Chr3:29702540-29702559 None:intergenic 45.0%
GCGCAGTACAAAGTACATCA+AGG + Chr3:29701906-29701925 None:intergenic 45.0%
GCTAAAGAAGCAGCAAGACA+AGG - Chr3:29706126-29706145 MsG0380013063.01.T01:intron 45.0%
GCTCGGGATGTTATTCTTTC+TGG - Chr3:29702201-29702220 MsG0380013063.01.T01:intron 45.0%
GGACCTATGAAGCACAGATA+CGG + Chr3:29698858-29698877 None:intergenic 45.0%
GGCAAAATGAATGTCCACAG+GGG + Chr3:29702541-29702560 None:intergenic 45.0%
GGGAGGATACATGATTACTC+CGG + Chr3:29699789-29699808 None:intergenic 45.0%
GTAAGCCGTATAGGCTTCAT+AGG - Chr3:29705518-29705537 MsG0380013063.01.T01:intron 45.0%
GTGCACTGTTCTCATATGGT+TGG - Chr3:29704924-29704943 MsG0380013063.01.T01:intron 45.0%
GTGGATGCAGTCAAGTGTAT+TGG - Chr3:29700020-29700039 MsG0380013063.01.T01:intron 45.0%
TAAAAGCGACCATCTGGAAG+TGG + Chr3:29704669-29704688 None:intergenic 45.0%
TACCAGACCTGATTGGATTC+TGG - Chr3:29704013-29704032 MsG0380013063.01.T01:intron 45.0%
TATGTTAACAGATTGCCCCC+AGG + Chr3:29703033-29703052 None:intergenic 45.0%
TCAAAGTCATCATTCCGCTC+TGG + Chr3:29702476-29702495 None:intergenic 45.0%
TCAGAACATAGGCCATTGAG+TGG - Chr3:29700883-29700902 MsG0380013063.01.T01:intron 45.0%
TCCGTTCTTGGGATCAAGAT+GGG - Chr3:29705303-29705322 MsG0380013063.01.T01:intron 45.0%
TCCTTCAAACCCAGCTGAAA+TGG + Chr3:29701020-29701039 None:intergenic 45.0%
TCGAGACAACAGAATGGAAG+AGG - Chr3:29699554-29699573 MsG0380013063.01.T01:intron 45.0%
TCGTAGGCCTTCAGAAAGAT+TGG - Chr3:29706434-29706453 MsG0380013063.01.T01:intron 45.0%
TCTCTTTCCTTTGTCCCTTC+TGG + Chr3:29705460-29705479 None:intergenic 45.0%
TCTTGAATGTAGGGCAAGTG+TGG - Chr3:29701360-29701379 MsG0380013063.01.T01:intron 45.0%
TGAAGATAAGGATCTGCGCA+TGG + Chr3:29702077-29702096 None:intergenic 45.0%
TGAAGCCTATACGGCTTACA+AGG + Chr3:29705517-29705536 None:intergenic 45.0%
TGGACCAGAAGGATTGTCAT+GGG - Chr3:29699482-29699501 MsG0380013063.01.T01:intron 45.0%
TGTCCGTATCTGTGCTTCAT+AGG - Chr3:29698852-29698871 MsG0380013063.01.T01:intron 45.0%
TTAACCCATGTCGCTAGTTG+AGG - Chr3:29701295-29701314 MsG0380013063.01.T01:intron 45.0%
TTCACCTCAACTAGCGACAT+GGG + Chr3:29701302-29701321 None:intergenic 45.0%
TTCCAGAATCCAATCAGGTC+TGG + Chr3:29704018-29704037 None:intergenic 45.0%
TTTCTTCGAGCAGAGGAACA+AGG - Chr3:29706737-29706756 MsG0380013063.01.T01:CDS 45.0%
! ACATACTTCGGCAAGTGTTG+TGG + Chr3:29700917-29700936 None:intergenic 45.0%
! ACCCAAAAACTAAAGCGCTC+GGG + Chr3:29706301-29706320 None:intergenic 45.0%
! ACGCATCGGAATCAAGGTTT+TGG + Chr3:29698014-29698033 None:intergenic 45.0%
! ACGTTTGAGTGGTTTTCCAG+AGG - Chr3:29698119-29698138 MsG0380013063.01.T01:intron 45.0%
! CACCCAAAAACTAAAGCGCT+CGG + Chr3:29706302-29706321 None:intergenic 45.0%
! CATACTTCGGCAAGTGTTGT+GGG + Chr3:29700916-29700935 None:intergenic 45.0%
!! AAGTGCTTAAAGAGTGCCCT+GGG - Chr3:29703013-29703032 MsG0380013063.01.T01:intron 45.0%
!! GAAAGTGCTCGAACATGGAT+AGG - Chr3:29706099-29706118 MsG0380013063.01.T01:intron 45.0%
!! GACTTATGGTGAGTTGGTCA+TGG - Chr3:29703530-29703549 MsG0380013063.01.T01:CDS 45.0%
!! GCTTAGAGAAGTGCTATGGA+CGG + Chr3:29703702-29703721 None:intergenic 45.0%
!! TAAGTGCTTAAAGAGTGCCC+TGG - Chr3:29703012-29703031 MsG0380013063.01.T01:intron 45.0%
!! TCGCTGCAATTTGTTGTGTG+TGG - Chr3:29705358-29705377 MsG0380013063.01.T01:intron 45.0%
!! TTGCAGGATAATGGACCAGA+AGG - Chr3:29699471-29699490 MsG0380013063.01.T01:intron 45.0%
!!! CACATGTTTTGGTGTCGTGT+CGG + Chr3:29698767-29698786 None:intergenic 45.0%
!!! CCAGATGGTCGCTTTTATAG+AGG - Chr3:29704672-29704691 MsG0380013063.01.T01:CDS 45.0%
!! ATATTGAAATATTATAAAAA+AGG + Chr3:29705207-29705226 None:intergenic 5.0%
!! TAATCATATTTATATATAAA+TGG + Chr3:29699639-29699658 None:intergenic 5.0%
!! TTTAATTAATATATTCTATT+AGG + Chr3:29701851-29701870 None:intergenic 5.0%
!!! TTTTTTATAATATTTCAATA+TGG - Chr3:29705206-29705225 MsG0380013063.01.T01:intron 5.0%
AAGGATCTGCGCATGGACAA+AGG + Chr3:29702070-29702089 None:intergenic 50.0%
ACAGTGCAAAGTAGCGAGTG+TGG + Chr3:29702011-29702030 None:intergenic 50.0%
ACATGTGTCATGTCGGAAGG+AGG + Chr3:29698915-29698934 None:intergenic 50.0%
ACCACACTAACACGTCGACA+TGG + Chr3:29698826-29698845 None:intergenic 50.0%
ACCATGTCGACGTGTTAGTG+TGG - Chr3:29698822-29698841 MsG0380013063.01.T01:intron 50.0%
AGAATCGGAAGGAGGTTGAG+TGG + Chr3:29697428-29697447 None:intergenic 50.0%
AGCAGAACTGTCCTGCACAA+TGG + Chr3:29702689-29702708 None:intergenic 50.0%
AGCAGAGTTTGGCTGTGAAG+TGG - Chr3:29704502-29704521 MsG0380013063.01.T01:intron 50.0%
AGCCGTATAGGCTTCATAGG+AGG - Chr3:29705521-29705540 MsG0380013063.01.T01:intron 50.0%
AGGCAATCATCGGATGGGAA+TGG - Chr3:29704343-29704362 MsG0380013063.01.T01:intron 50.0%
ATGTAGGGCAAGTGTGGAGT+TGG - Chr3:29701366-29701385 MsG0380013063.01.T01:intron 50.0%
ATTTGGAGAGGATCGAGGAC+TGG - Chr3:29704097-29704116 MsG0380013063.01.T01:intron 50.0%
CAGACACGCCTTCTATCAGA+AGG + Chr3:29698723-29698742 None:intergenic 50.0%
CAGGATATTATGCCGCCAGA+AGG - Chr3:29705442-29705461 MsG0380013063.01.T01:CDS 50.0%
CATCTTGATCCCAAGAACGG+AGG + Chr3:29705304-29705323 None:intergenic 50.0%
CTCCGTTCTTGGGATCAAGA+TGG - Chr3:29705302-29705321 MsG0380013063.01.T01:intron 50.0%
CTTCGATTGCCGAGGATGAT+TGG + Chr3:29700680-29700699 None:intergenic 50.0%
CTTTCCTTTGTCCCTTCTGG+CGG + Chr3:29705457-29705476 None:intergenic 50.0%
GAAGGATGCTGCAAAGCTTG+TGG - Chr3:29701034-29701053 MsG0380013063.01.T01:intron 50.0%
GATTTCGCAACCTCCGTTCT+TGG - Chr3:29705291-29705310 MsG0380013063.01.T01:intron 50.0%
GCAACATTTGGAGAGGATCG+AGG - Chr3:29704092-29704111 MsG0380013063.01.T01:intron 50.0%
GCAGAACTGTCCTGCACAAT+GGG + Chr3:29702688-29702707 None:intergenic 50.0%
GCGACAACAGTATTGTTCCG+TGG - Chr3:29700001-29700020 MsG0380013063.01.T01:intron 50.0%
GGCCTTTCGAGACAACAGAA+TGG - Chr3:29699548-29699567 MsG0380013063.01.T01:intron 50.0%
GTACACATGCACAACCAGAG+CGG - Chr3:29702459-29702478 MsG0380013063.01.T01:intron 50.0%
GTGTCCCATGACAATCCTTC+TGG + Chr3:29699489-29699508 None:intergenic 50.0%
GTTGGACATGGCCTGTGTTA+TGG - Chr3:29701384-29701403 MsG0380013063.01.T01:intron 50.0%
TGAAGGCCTACGATTCGAGA+GGG + Chr3:29706427-29706446 None:intergenic 50.0%
TGTTTCCACAATCGCGGTTG+TGG - Chr3:29697976-29697995 MsG0380013063.01.T01:intron 50.0%
! CCCAAAAACTAAAGCGCTCG+GGG + Chr3:29706300-29706319 None:intergenic 50.0%
! CTTCTGATAGAAGGCGTGTC+TGG - Chr3:29698721-29698740 MsG0380013063.01.T01:CDS 50.0%
! GCACTGACCCTTCTGATAGA+AGG - Chr3:29698712-29698731 MsG0380013063.01.T01:intron 50.0%
!! AGTGCTTAAAGAGTGCCCTG+GGG - Chr3:29703014-29703033 MsG0380013063.01.T01:intron 50.0%
!! CAGCAGAAAGTGCTCGAACA+TGG - Chr3:29706094-29706113 MsG0380013063.01.T01:intron 50.0%
!!! ACCCCGAGCGCTTTAGTTTT+TGG - Chr3:29706296-29706315 MsG0380013063.01.T01:intron 50.0%
!!! CCCCGAGCGCTTTAGTTTTT+GGG - Chr3:29706297-29706316 MsG0380013063.01.T01:intron 50.0%
AACGTCCACAACCGCGATTG+TGG + Chr3:29697984-29698003 None:intergenic 55.0%
AAGCTGCACTTCGATTGCCG+AGG + Chr3:29700688-29700707 None:intergenic 55.0%
ACGTCGAGAGAATCGGAAGG+AGG + Chr3:29697436-29697455 None:intergenic 55.0%
AGGTGTGAGCCACTTCCAGA+TGG - Chr3:29704657-29704676 MsG0380013063.01.T01:CDS 55.0%
CGACGTGTTAGTGTGGTGTC+AGG - Chr3:29698829-29698848 MsG0380013063.01.T01:intron 55.0%
CGCTCGGGGTCTCTTAATGA+GGG + Chr3:29706286-29706305 None:intergenic 55.0%
CTGAAGGCCTACGATTCGAG+AGG + Chr3:29706428-29706447 None:intergenic 55.0%
GGAACAGATGCCCATTGTGC+AGG - Chr3:29702675-29702694 MsG0380013063.01.T01:intron 55.0%
GGCAAGTGTGGAGTTGGACA+TGG - Chr3:29701372-29701391 MsG0380013063.01.T01:intron 55.0%
GTCGTCGACGTCGAGAGAAT+CGG + Chr3:29697443-29697462 None:intergenic 55.0%
GTGGGATCAAGCCCACTCAA+TGG + Chr3:29700898-29700917 None:intergenic 55.0%
TATGCCGCCAGAAGGGACAA+AGG - Chr3:29705450-29705469 MsG0380013063.01.T01:CDS 55.0%
TCATAGGTCCGCACTCGCAA+CGG - Chr3:29698868-29698887 MsG0380013063.01.T01:intron 55.0%
TCGACGTCGAGAGAATCGGA+AGG + Chr3:29697439-29697458 None:intergenic 55.0%
TCGCTACCCTCTCGAATCGT+AGG - Chr3:29706418-29706437 MsG0380013063.01.T01:intron 55.0%
! CGACGTCGACGACTACGTTT+TGG - Chr3:29697450-29697469 MsG0380013063.01.T01:CDS 55.0%
! GTCTTGTTATCGACTGCCCC+CGG - Chr3:29702762-29702781 MsG0380013063.01.T01:intron 55.0%
! TCTTGTTATCGACTGCCCCC+GGG - Chr3:29702763-29702782 MsG0380013063.01.T01:intron 55.0%
!! ATCCTTAAAGAGTGCCCCGG+GGG + Chr3:29702781-29702800 None:intergenic 55.0%
!! GATCCTTAAAGAGTGCCCCG+GGG + Chr3:29702782-29702801 None:intergenic 55.0%
!! GGATCCTTAAAGAGTGCCCC+GGG + Chr3:29702783-29702802 None:intergenic 55.0%
!! GGGATCCTTAAAGAGTGCCC+CGG + Chr3:29702784-29702803 None:intergenic 55.0%
!! GTGCTTAAAGAGTGCCCTGG+GGG - Chr3:29703015-29703034 MsG0380013063.01.T01:intron 55.0%
!! TGGTCTTGTATCGACTGCCC+CGG - Chr3:29702887-29702906 MsG0380013063.01.T01:intron 55.0%
CAGAAGGGTCAGTGCGACTG+AGG + Chr3:29698707-29698726 None:intergenic 60.0%
GAACCTGTCACAACCCCCTG+TGG - Chr3:29702524-29702543 MsG0380013063.01.T01:intron 60.0%
GACACTCTCCGTTGCGAGTG+CGG + Chr3:29698879-29698898 None:intergenic 60.0%
GCGCTCGGGGTCTCTTAATG+AGG + Chr3:29706287-29706306 None:intergenic 60.0%
TGTCCACAGGGGGTTGTGAC+AGG + Chr3:29702530-29702549 None:intergenic 60.0%
! CTTGTTATCGACTGCCCCCG+GGG - Chr3:29702764-29702783 MsG0380013063.01.T01:intron 60.0%
!! GGTCTTGTATCGACTGCCCC+GGG - Chr3:29702888-29702907 MsG0380013063.01.T01:intron 60.0%
!! GTCTTGTATCGACTGCCCCG+GGG - Chr3:29702889-29702908 MsG0380013063.01.T01:intron 60.0%
! CTGCCCCGGGGCACTCTTTA+AGG - Chr3:29702901-29702920 MsG0380013063.01.T01:intron 65.0%
! TGCCCCCGGGGCACTCTTTA+AGG - Chr3:29702776-29702795 MsG0380013063.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 29697421 29706775 29697421 ID=MsG0380013063.01;Name=MsG0380013063.01
Chr3 mRNA 29697421 29706775 29697421 ID=MsG0380013063.01.T01;Parent=MsG0380013063.01;Name=MsG0380013063.01.T01;_AED=0.44;_eAED=0.58;_QI=0|0|0|1|0.71|0.66|15|0|402
Chr3 exon 29706725 29706775 29706725 ID=MsG0380013063.01.T01:exon:6906;Parent=MsG0380013063.01.T01
Chr3 exon 29705413 29705533 29705413 ID=MsG0380013063.01.T01:exon:6907;Parent=MsG0380013063.01.T01
Chr3 exon 29704621 29704736 29704621 ID=MsG0380013063.01.T01:exon:6908;Parent=MsG0380013063.01.T01
Chr3 exon 29703482 29703564 29703482 ID=MsG0380013063.01.T01:exon:6909;Parent=MsG0380013063.01.T01
Chr3 exon 29703266 29703350 29703266 ID=MsG0380013063.01.T01:exon:6910;Parent=MsG0380013063.01.T01
Chr3 exon 29703084 29703170 29703084 ID=MsG0380013063.01.T01:exon:6911;Parent=MsG0380013063.01.T01
Chr3 exon 29699662 29699723 29699662 ID=MsG0380013063.01.T01:exon:6912;Parent=MsG0380013063.01.T01
Chr3 exon 29699503 29699537 29699503 ID=MsG0380013063.01.T01:exon:6913;Parent=MsG0380013063.01.T01
Chr3 exon 29699107 29699153 29699107 ID=MsG0380013063.01.T01:exon:6914;Parent=MsG0380013063.01.T01
Chr3 exon 29698872 29699023 29698872 ID=MsG0380013063.01.T01:exon:6915;Parent=MsG0380013063.01.T01
Chr3 exon 29698713 29698782 29698713 ID=MsG0380013063.01.T01:exon:6916;Parent=MsG0380013063.01.T01
Chr3 exon 29698049 29698124 29698049 ID=MsG0380013063.01.T01:exon:6917;Parent=MsG0380013063.01.T01
Chr3 exon 29697863 29697957 29697863 ID=MsG0380013063.01.T01:exon:6918;Parent=MsG0380013063.01.T01
Chr3 exon 29697711 29697779 29697711 ID=MsG0380013063.01.T01:exon:6919;Parent=MsG0380013063.01.T01
Chr3 exon 29697421 29697480 29697421 ID=MsG0380013063.01.T01:exon:6920;Parent=MsG0380013063.01.T01
Chr3 CDS 29706725 29706775 29706725 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29705413 29705533 29705413 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29704621 29704736 29704621 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29703482 29703564 29703482 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29703266 29703350 29703266 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29703084 29703170 29703084 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29699662 29699723 29699662 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29699503 29699537 29699503 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29699107 29699153 29699107 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29698872 29699023 29698872 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29698713 29698782 29698713 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29698049 29698124 29698049 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29697863 29697957 29697863 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29697711 29697779 29697711 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Chr3 CDS 29697421 29697480 29697421 ID=MsG0380013063.01.T01:cds;Parent=MsG0380013063.01.T01
Gene Sequence

>MsG0380013063.01.T01

ATGGCCACTCAACCTCCTTCCGATTCTCTCGACGTCGACGACTACGTTTTGGTTTCTTACTGTCATTGTAAATGGCTTAGTGTCTGTGCAGACCTCAGTCGCACTGACCCTTCTGATAGAAGGCGTGTCTGGTGTCTGACACATGTCAGTGTCCGACACGACACCAAAACATATTTGGTTTGGTTGCAGGATAATGGACCAGAAGGATTGTCATGGGACACATTTCATTATGTTTACGAGCTTGTACAAAAGGGAAATTTGGCCTTTCGAGACAACAGAATGGAAGAGGCAATCAACTTTTACTCAAGAGCCAATAACATCAAATCTAGTGATCCAATCATCCTCGGCAATCGAAGTGCAGCTTATATTAGGATTAGCCAATATTTAATGCATAGATCATCATCATCCTCAGAACATAGGCCATTGAGTGGGCTTGATCCCACAACACTTGCCGAACTGGGTTTGAAGGATGCTGCAAAGCTTGTGGAACTCCAAAGCAGTTCAGTAAAACCATACCTTTTGAAGGCTAATGCTCTTCTTCTGGTTATAATAGATGCTTCAACAGGTTCATTAGCAGAGTTTGGCTGTGAAGTGGAAATCACAGAGTGTGAGCCACTTCCAGATGGTCGCTTTTATAGAGATGGTCTTGAGGATTTCTTGACAATTGTTGAGTTGTTCAAGTTAAGAAAATTTCGATCGAATTCAACTCTTTTCTATACCTTTTTTATAATATTTCAATATGGAACAAATTTTGATTATTCCTTCAAAACAAATCATGATTATGTACAGATTGAAGGTCGTAGGAGATTTCGCAACCTCCGTTCTTGGGATCAAGATGGATATCGTGTTGCAGAAGTTGAATGGATACAGGATATTATGCCGCCAGAAGGGACAAAGGAAAGAGAGGATTTACTGGAATTGACGCATAATGCAGCAGAAAGTGCTCGAACATGGATAGGAAGAGCTAAAGAAGCAGCAAGACAAGATCAAAGAAGATTAGAGAAACTCGTGAATGTTGAAGGATTGATACCCTCATTAAGAGACCCCGAGCGCTTTAGTTTTTGGGTGATTACTACATCTCTCGCTACCCTCTCGAATCGTAGGCCTTCAGAAAGATTGGATCTCCTACGCATTAGAGATACTACAGAGAGAATTAGACGAGGCCTGATATTTCTTCGAGCAGAGGAACAAGGCTGCAGAATTCAGTAA

Protein sequence

>MsG0380013063.01.T01

MATQPPSDSLDVDDYVLVSYCHCKWLSVCADLSRTDPSDRRRVWCLTHVSVRHDTKTYLVWLQDNGPEGLSWDTFHYVYELVQKGNLAFRDNRMEEAINFYSRANNIKSSDPIILGNRSAAYIRISQYLMHRSSSSSEHRPLSGLDPTTLAELGLKDAAKLVELQSSSVKPYLLKANALLLVIIDASTGSLAEFGCEVEITECEPLPDGRFYRDGLEDFLTIVELFKLRKFRSNSTLFYTFFIIFQYGTNFDYSFKTNHDYVQIEGRRRFRNLRSWDQDGYRVAEVEWIQDIMPPEGTKEREDLLELTHNAAESARTWIGRAKEAARQDQRRLEKLVNVEGLIPSLRDPERFSFWVITTSLATLSNRRPSERLDLLRIRDTTERIRRGLIFLRAEEQGCRIQ*