Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005382.01.T01 | XP_003592080.1 | 94.565 | 184 | 10 | 0 | 1 | 184 | 1 | 184 | 1.66E-124 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005382.01.T01 | G7IBX7 | 94.565 | 184 | 10 | 0 | 1 | 184 | 1 | 184 | 7.92e-125 | 358 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048197.01 | MsG0180005382.01 | 0.803175 | 3.952562e-49 | 1.972877e-46 |
| MsG0080048817.01 | MsG0180005382.01 | 0.800487 | 1.408271e-48 | 6.565502e-46 |
| MsG0080048843.01 | MsG0180005382.01 | 0.818309 | 2.096849e-52 | 1.563981e-49 |
| MsG0080048968.01 | MsG0180005382.01 | 0.834634 | 2.675761e-56 | 3.194027e-53 |
| MsG0180000055.01 | MsG0180005382.01 | 0.803358 | 3.621256e-49 | 1.815942e-46 |
| MsG0180000546.01 | MsG0180005382.01 | 0.809199 | 2.129167e-50 | 1.242215e-47 |
| MsG0180000550.01 | MsG0180005382.01 | 0.808623 | 2.827655e-50 | 1.624530e-47 |
| MsG0180000611.01 | MsG0180005382.01 | 0.804049 | 2.603316e-49 | 1.328957e-46 |
| MsG0180000669.01 | MsG0180005382.01 | 0.806034 | 1.000863e-49 | 5.376728e-47 |
| MsG0180001141.01 | MsG0180005382.01 | 0.804813 | 1.803669e-49 | 9.390923e-47 |
| MsG0180001213.01 | MsG0180005382.01 | 0.814011 | 1.914389e-51 | 1.269752e-48 |
| MsG0180002458.01 | MsG0180005382.01 | 0.807441 | 5.046754e-50 | 2.811164e-47 |
| MsG0180002482.01 | MsG0180005382.01 | 0.802955 | 4.389061e-49 | 2.178424e-46 |
| MsG0180003697.01 | MsG0180005382.01 | 0.819836 | 9.422912e-53 | 7.332362e-50 |
| MsG0180003793.01 | MsG0180005382.01 | 0.812174 | 4.840516e-51 | 3.055895e-48 |
| MsG0180003854.01 | MsG0180005382.01 | 0.816344 | 5.804460e-52 | 4.102650e-49 |
| MsG0180004129.01 | MsG0180005382.01 | 0.800049 | 1.729334e-48 | 7.973106e-46 |
| MsG0180004130.01 | MsG0180005382.01 | 0.850521 | 1.609372e-60 | 3.160782e-57 |
| MsG0180004886.01 | MsG0180005382.01 | -0.807259 | 5.516076e-50 | 3.058150e-47 |
| MsG0180005268.01 | MsG0180005382.01 | 0.828976 | 6.663138e-55 | 6.726856e-52 |
| MsG0180005303.01 | MsG0180005382.01 | -0.800283 | 1.549546e-48 | 7.187072e-46 |
| MsG0180005382.01 | MsG0180005851.01 | 0.845760 | 3.321431e-59 | 5.593719e-56 |
| MsG0180005382.01 | MsG0180005913.01 | 0.806675 | 7.331292e-50 | 4.003240e-47 |
| MsG0180005382.01 | MsG0180005957.01 | 0.842792 | 2.083203e-58 | 3.193436e-55 |
| MsG0180005382.01 | MsG0180006220.01 | 0.817032 | 4.068899e-52 | 2.930522e-49 |
| MsG0180005382.01 | MsG0280006302.01 | -0.807620 | 4.624336e-50 | 2.587856e-47 |
| MsG0180005382.01 | MsG0280006406.01 | 0.859498 | 3.968152e-63 | 1.050147e-59 |
| MsG0180005382.01 | MsG0280007222.01 | 0.804060 | 2.589604e-49 | 1.322353e-46 |
| MsG0180005382.01 | MsG0280007847.01 | 0.803049 | 4.196483e-49 | 2.087817e-46 |
| MsG0180005382.01 | MsG0280008613.01 | 0.805121 | 1.555140e-49 | 8.160957e-47 |
| MsG0180005382.01 | MsG0280009230.01 | 0.873070 | 1.954410e-67 | 8.369471e-64 |
| MsG0180005382.01 | MsG0280009716.01 | 0.816331 | 5.842145e-52 | 4.127814e-49 |
| MsG0180005382.01 | MsG0280010013.01 | 0.850015 | 2.231065e-60 | 4.310195e-57 |
| MsG0180005382.01 | MsG0280010205.01 | 0.814958 | 1.181731e-51 | 8.041179e-49 |
| MsG0180005382.01 | MsG0280010776.01 | 0.832525 | 8.995648e-56 | 1.008034e-52 |
| MsG0180005382.01 | MsG0280011371.01 | 0.828646 | 8.005941e-55 | 8.005970e-52 |
| MsG0180005382.01 | MsG0280011387.01 | 0.869304 | 3.424039e-66 | 1.278685e-62 |
| MsG0180005382.01 | MsG0380011614.01 | 0.830500 | 2.836710e-55 | 2.993868e-52 |
| MsG0180005382.01 | MsG0380011704.01 | 0.832199 | 1.083147e-55 | 1.202066e-52 |
| MsG0180005382.01 | MsG0380012310.01 | 0.838454 | 2.848021e-57 | 3.816710e-54 |
| MsG0180005382.01 | MsG0380015027.01 | 0.828829 | 7.233928e-55 | 7.271971e-52 |
| MsG0180005382.01 | MsG0380015818.01 | 0.844574 | 6.948066e-59 | 1.126592e-55 |
| MsG0180005382.01 | MsG0380015964.01 | 0.822616 | 2.153962e-53 | 1.812215e-50 |
| MsG0180005382.01 | MsG0380015965.01 | 0.836311 | 1.008179e-56 | 1.265880e-53 |
| MsG0180005382.01 | MsG0380017023.01 | 0.842005 | 3.366544e-58 | 5.035066e-55 |
| MsG0180005382.01 | MsG0480018906.01 | 0.805188 | 1.506250e-49 | 7.917739e-47 |
| MsG0180005382.01 | MsG0480019373.01 | 0.801428 | 9.045399e-49 | 4.318658e-46 |
| MsG0180005382.01 | MsG0480019380.01 | 0.803220 | 3.867476e-49 | 1.932629e-46 |
| MsG0180005382.01 | MsG0480020843.01 | 0.807503 | 4.895445e-50 | 2.731436e-47 |
| MsG0180005382.01 | MsG0480021006.01 | 0.819872 | 9.245955e-53 | 7.201745e-50 |
| MsG0180005382.01 | MsG0480021061.01 | 0.803159 | 3.981765e-49 | 1.986647e-46 |
| MsG0180005382.01 | MsG0480021904.01 | 0.838767 | 2.365002e-57 | 3.199595e-54 |
| MsG0180005382.01 | MsG0480021994.01 | 0.844898 | 5.683127e-59 | 9.308651e-56 |
| MsG0180005382.01 | MsG0480022035.01 | 0.846660 | 1.888559e-59 | 3.274330e-56 |
| MsG0180005382.01 | MsG0480022246.01 | 0.804877 | 1.749553e-49 | 9.124415e-47 |
| MsG0180005382.01 | MsG0480022493.01 | 0.857466 | 1.601723e-62 | 3.957059e-59 |
| MsG0180005382.01 | MsG0480022768.01 | 0.803318 | 3.691572e-49 | 1.849322e-46 |
| MsG0180005382.01 | MsG0480022791.01 | 0.824244 | 8.963726e-54 | 7.895563e-51 |
| MsG0180005382.01 | MsG0480023055.01 | 0.800532 | 1.379344e-48 | 6.437754e-46 |
| MsG0180005382.01 | MsG0480023378.01 | 0.809000 | 2.348860e-50 | 1.362987e-47 |
| MsG0180005382.01 | MsG0480023415.01 | 0.800028 | 1.746759e-48 | 8.049029e-46 |
| MsG0180005382.01 | MsG0480023652.01 | 0.808175 | 3.523526e-50 | 2.000909e-47 |
| MsG0180005382.01 | MsG0480023814.01 | 0.803567 | 3.277617e-49 | 1.652658e-46 |
| MsG0180005382.01 | MsG0580024084.01 | 0.838224 | 3.265806e-57 | 4.345303e-54 |
| MsG0180005382.01 | MsG0580024390.01 | 0.817796 | 2.738352e-52 | 2.013950e-49 |
| MsG0180005382.01 | MsG0580024495.01 | 0.818330 | 2.073558e-52 | 1.547557e-49 |
| MsG0180005382.01 | MsG0580025400.01 | 0.885408 | 8.346140e-72 | 5.722462e-68 |
| MsG0180005382.01 | MsG0580025421.01 | 0.849885 | 2.426470e-60 | 4.667705e-57 |
| MsG0180005382.01 | MsG0580027361.01 | 0.825386 | 4.821138e-54 | 4.387794e-51 |
| MsG0180005382.01 | MsG0580029283.01 | 0.849450 | 3.209189e-60 | 6.085875e-57 |
| MsG0180005382.01 | MsG0580029355.01 | 0.814857 | 1.244525e-51 | 8.445347e-49 |
| MsG0180005382.01 | MsG0580029717.01 | 0.814713 | 1.339263e-51 | 9.053271e-49 |
| MsG0180005382.01 | MsG0580029783.01 | 0.805296 | 1.429589e-49 | 7.535712e-47 |
| MsG0180005382.01 | MsG0580029952.01 | 0.803468 | 3.436703e-49 | 1.728323e-46 |
| MsG0180005382.01 | MsG0680032430.01 | 0.825292 | 5.075899e-54 | 4.607536e-51 |
| MsG0180005382.01 | MsG0680035704.01 | 0.812004 | 5.272095e-51 | 3.312984e-48 |
| MsG0180005382.01 | MsG0680035854.01 | 0.872884 | 2.256693e-67 | 9.596908e-64 |
| MsG0180005382.01 | MsG0780036240.01 | 0.842033 | 3.309853e-58 | 4.954638e-55 |
| MsG0180005382.01 | MsG0780036813.01 | 0.802504 | 5.435999e-49 | 2.667317e-46 |
| MsG0180005382.01 | MsG0780036964.01 | 0.820033 | 8.492441e-53 | 6.645053e-50 |
| MsG0180005382.01 | MsG0780037082.01 | 0.803642 | 3.162270e-49 | 1.597468e-46 |
| MsG0180005382.01 | MsG0780038400.01 | 0.811995 | 5.295495e-51 | 3.326815e-48 |
| MsG0180005382.01 | MsG0780039258.01 | 0.835941 | 1.251308e-56 | 1.553359e-53 |
| MsG0180005382.01 | MsG0780039340.01 | 0.802867 | 4.575707e-49 | 2.266062e-46 |
| MsG0180005382.01 | MsG0780039943.01 | 0.819863 | 9.290957e-53 | 7.235007e-50 |
| MsG0180005382.01 | MsG0780040445.01 | 0.805786 | 1.128299e-49 | 6.023070e-47 |
| MsG0180005382.01 | MsG0780041137.01 | 0.832303 | 1.020682e-55 | 1.136130e-52 |
| MsG0180005382.01 | MsG0780041223.01 | 0.800390 | 1.474094e-48 | 6.855448e-46 |
| MsG0180005382.01 | MsG0780041294.01 | 0.824397 | 8.253570e-54 | 7.301650e-51 |
| MsG0180005382.01 | MsG0780041441.01 | 0.805288 | 1.434996e-49 | 7.562722e-47 |
| MsG0180005382.01 | MsG0780041507.01 | 0.807181 | 5.730353e-50 | 3.170449e-47 |
| MsG0180005382.01 | MsG0880042294.01 | 0.809088 | 2.249286e-50 | 1.308354e-47 |
| MsG0180005382.01 | MsG0880042519.01 | 0.804323 | 2.282174e-49 | 1.173231e-46 |
| MsG0180005382.01 | MsG0880045684.01 | 0.802751 | 4.834244e-49 | 2.387126e-46 |
| MsG0180005382.01 | MsG0880046285.01 | 0.824998 | 5.955186e-54 | 5.360830e-51 |
| MsG0180005382.01 | MsG0880046321.01 | 0.847417 | 1.171995e-59 | 2.081690e-56 |
| MsG0180005382.01 | MsG0880046328.01 | 0.811223 | 7.796373e-51 | 4.798653e-48 |
| MsG0180005382.01 | MsG0880046384.01 | -0.804164 | 2.463422e-49 | 1.261230e-46 |
| MsG0180005382.01 | MsG0880046575.01 | 0.814385 | 1.582537e-51 | 1.060422e-48 |
| MsG0180005382.01 | MsG0880047116.01 | 0.831728 | 1.416394e-55 | 1.550522e-52 |
| MsG0180005382.01 | MsG0880047427.01 | 0.852715 | 3.848272e-61 | 8.113486e-58 |
| MsG0180005382.01 | MsG0880047428.01 | 0.835737 | 1.409643e-56 | 1.739373e-53 |
| MsG0180005382.01 | MsG0880047448.01 | 0.813567 | 2.397933e-51 | 1.571441e-48 |
| MsG0180005382.01 | MsG0880047607.01 | 0.802378 | 5.770899e-49 | 2.822732e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005382.01.T01 | MTR_1g098510 | 94.565 | 184 | 10 | 0 | 1 | 184 | 1 | 184 | 2.01e-128 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005382.01.T01 | AT5G09270 | 55.789 | 95 | 37 | 2 | 90 | 184 | 19 | 108 | 4.28e-31 | 109 |
| MsG0180005382.01.T01 | AT5G09270 | 55.789 | 95 | 37 | 2 | 90 | 184 | 19 | 108 | 4.28e-31 | 109 |
Find 52 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCCTGCTGCAGGCTTTA+TGG | 0.092653 | 1:+91092130 | MsG0180005382.01.T01:CDS |
| CTCTTCTGCTACGGGCTTTA+TGG | 0.095185 | 1:+91091959 | MsG0180005382.01.T01:CDS |
| TATATGGCGGATTTGGTCTT+TGG | 0.234560 | 1:+91092231 | MsG0180005382.01.T01:CDS |
| ATTCTTGTATATGGCGGATT+TGG | 0.303440 | 1:+91092224 | MsG0180005382.01.T01:CDS |
| ATAGATATAGAAAGCTTCTT+AGG | 0.309898 | 1:+91092261 | MsG0180005382.01.T01:CDS |
| GGTTCCTATATTCTTGTATA+TGG | 0.337081 | 1:+91092215 | MsG0180005382.01.T01:CDS |
| TTCTGCCAAAGTGGTTGAAA+AGG | 0.353945 | 1:+91092370 | MsG0180005382.01.T01:CDS |
| CTTGGTCCTCACCAGTTTCC+AGG | 0.356142 | 1:-91092097 | None:intergenic |
| TGCAGGCTTTATGGATTCAT+TGG | 0.369416 | 1:+91092139 | MsG0180005382.01.T01:CDS |
| CAGAAACTTATCCTTATGTA+TGG | 0.372733 | 1:+91092192 | MsG0180005382.01.T01:CDS |
| TGGATAAGTGCTTCAGAACT+TGG | 0.383586 | 1:-91091906 | None:intergenic |
| TTATGGATTCATTGGAAAAT+CGG | 0.384322 | 1:+91092147 | MsG0180005382.01.T01:CDS |
| TGATTTGCCATGTCCTTGGC+TGG | 0.408407 | 1:-91092029 | None:intergenic |
| AAGAAGCTTTCTATATCTAT+AGG | 0.413891 | 1:-91092258 | None:intergenic |
| GTCGGTGCCCCTCCTGCTGC+AGG | 0.419080 | 1:+91092122 | MsG0180005382.01.T01:CDS |
| CAGGAGGGGCACCGACTACT+TGG | 0.421600 | 1:-91092115 | None:intergenic |
| AAGTTCTGCAGCACCTATCC+TGG | 0.422828 | 1:+91092079 | MsG0180005382.01.T01:CDS |
| AGGATAGGTGCTGCAGAACT+TGG | 0.446859 | 1:-91092077 | None:intergenic |
| AGTCGGTGGCTCTTCTGCTA+CGG | 0.454743 | 1:+91091950 | MsG0180005382.01.T01:CDS |
| GCAGCACCTATCCTGGAAAC+TGG | 0.465240 | 1:+91092086 | MsG0180005382.01.T01:CDS |
| GAAGCACTTATCCAGAAAAC+TGG | 0.468163 | 1:+91091915 | MsG0180005382.01.T01:CDS |
| GTCGGTGGCTCTTCTGCTAC+GGG | 0.474768 | 1:+91091951 | MsG0180005382.01.T01:CDS |
| TCCGCCATATACAAGAATAT+AGG | 0.486205 | 1:-91092219 | None:intergenic |
| TGGTTGATTTGCCATGTCCT+TGG | 0.486730 | 1:-91092033 | None:intergenic |
| ACTACGTGAGATGGTTGAAA+AGG | 0.493284 | 1:+91092316 | MsG0180005382.01.T01:CDS |
| AGCTTCTTAGGACAGAGGAC+AGG | 0.494425 | 1:+91092273 | MsG0180005382.01.T01:CDS |
| AGAAACTTATCCTTATGTAT+GGG | 0.501079 | 1:+91092193 | MsG0180005382.01.T01:CDS |
| TTCTAATAATTCTGCCAAAG+TGG | 0.501415 | 1:+91092361 | MsG0180005382.01.T01:CDS |
| TCTGCCAAAGTGGTTGAAAA+GGG | 0.502981 | 1:+91092371 | MsG0180005382.01.T01:CDS |
| ATATAGGAACCCCATACATA+AGG | 0.508413 | 1:-91092203 | None:intergenic |
| TCCTATATTCTTGTATATGG+CGG | 0.519420 | 1:+91092218 | MsG0180005382.01.T01:CDS |
| ATGTTGCAATGTAGGCTACT+TGG | 0.523428 | 1:-91092417 | None:intergenic |
| CATAAAGCCTGCAGCAGGAG+GGG | 0.525453 | 1:-91092129 | None:intergenic |
| TCCTCACCAGTTTCCAGGAT+AGG | 0.526596 | 1:-91092092 | None:intergenic |
| TCCATAAAGCCTGCAGCAGG+AGG | 0.530529 | 1:-91092131 | None:intergenic |
| TTAGGACAGAGGACAGGGTA+CGG | 0.537011 | 1:+91092279 | MsG0180005382.01.T01:CDS |
| GAATCCATAAAGCCTGCAGC+AGG | 0.543830 | 1:-91092134 | None:intergenic |
| TAGGACAGAGGACAGGGTAC+GGG | 0.558112 | 1:+91092280 | MsG0180005382.01.T01:CDS |
| GGAAGGAATCTCAGAAGATG+TGG | 0.565631 | 1:-91092396 | None:intergenic |
| GAAACTTATCCTTATGTATG+GGG | 0.570070 | 1:+91092194 | MsG0180005382.01.T01:CDS |
| TCAAGCAAGACTACGTGAGA+TGG | 0.592566 | 1:+91092307 | MsG0180005382.01.T01:CDS |
| CCATAAAGCCTGCAGCAGGA+GGG | 0.618716 | 1:-91092130 | None:intergenic |
| TAGCTGGAACACTCCAGCCA+AGG | 0.621030 | 1:+91092016 | MsG0180005382.01.T01:CDS |
| GAACACTCCAGCCAAGGACA+TGG | 0.636957 | 1:+91092022 | MsG0180005382.01.T01:CDS |
| GCTTCTTAGGACAGAGGACA+GGG | 0.639564 | 1:+91092274 | MsG0180005382.01.T01:CDS |
| ACCTATCCTGGAAACTGGTG+AGG | 0.641675 | 1:+91092091 | MsG0180005382.01.T01:CDS |
| TGCAATGTAGGCTACTTGGA+AGG | 0.646398 | 1:-91092413 | None:intergenic |
| ACTGGCGAGGATCAAGTAGT+CGG | 0.654403 | 1:+91091933 | MsG0180005382.01.T01:CDS |
| TAGAAAGCTTCTTAGGACAG+AGG | 0.663471 | 1:+91092268 | MsG0180005382.01.T01:CDS |
| ACTGGTGAGGACCAAGTAGT+CGG | 0.664340 | 1:+91092104 | MsG0180005382.01.T01:CDS |
| GGCGAGGATCAAGTAGTCGG+TGG | 0.665719 | 1:+91091936 | MsG0180005382.01.T01:CDS |
| ACTTATCCAGAAAACTGGCG+AGG | 0.696112 | 1:+91091920 | MsG0180005382.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGGATTCATTGAAAAAT+CGG | + | Chr1:91091976-91091995 | MsG0180005382.01.T01:CDS | 20.0% |
| ! | AAGAAGCTTTCTATATCTAT+AGG | - | Chr1:91092261-91092280 | None:intergenic | 25.0% |
| ! | AGAAACTTATCCTTATGTAT+GGG | + | Chr1:91092193-91092212 | MsG0180005382.01.T01:CDS | 25.0% |
| ! | ATAGATATAGAAAGCTTCTT+AGG | + | Chr1:91092261-91092280 | MsG0180005382.01.T01:CDS | 25.0% |
| ! | ATCAAAAAATCATAGATAGC+TGG | + | Chr1:91092000-91092019 | MsG0180005382.01.T01:CDS | 25.0% |
| ! | TTATGGATTCATTGGAAAAT+CGG | + | Chr1:91092147-91092166 | MsG0180005382.01.T01:CDS | 25.0% |
| CAGAAACTTATCCTTATGTA+TGG | + | Chr1:91092192-91092211 | MsG0180005382.01.T01:CDS | 30.0% | |
| GAAACTTATCCTTATGTATG+GGG | + | Chr1:91092194-91092213 | MsG0180005382.01.T01:CDS | 30.0% | |
| GGTTCCTATATTCTTGTATA+TGG | + | Chr1:91092215-91092234 | MsG0180005382.01.T01:CDS | 30.0% | |
| TCCTATATTCTTGTATATGG+CGG | + | Chr1:91092218-91092237 | MsG0180005382.01.T01:CDS | 30.0% | |
| TTCTAATAATTCTGCCAAAG+TGG | + | Chr1:91092361-91092380 | MsG0180005382.01.T01:CDS | 30.0% | |
| !!! | GCTTGTTGCTTTTCATTATT+TGG | - | Chr1:91092056-91092075 | None:intergenic | 30.0% |
| ATATAGGAACCCCATACATA+AGG | - | Chr1:91092206-91092225 | None:intergenic | 35.0% | |
| TCCGCCATATACAAGAATAT+AGG | - | Chr1:91092222-91092241 | None:intergenic | 35.0% | |
| !! | ATTCTTGTATATGGCGGATT+TGG | + | Chr1:91092224-91092243 | MsG0180005382.01.T01:CDS | 35.0% |
| !!! | GCTTGCTGCTTTTCATTATT+TGG | - | Chr1:91091885-91091904 | None:intergenic | 35.0% |
| ACTACGTGAGATGGTTGAAA+AGG | + | Chr1:91092316-91092335 | MsG0180005382.01.T01:CDS | 40.0% | |
| TAGAAAGCTTCTTAGGACAG+AGG | + | Chr1:91092268-91092287 | MsG0180005382.01.T01:CDS | 40.0% | |
| TCTGCCAAAGTGGTTGAAAA+GGG | + | Chr1:91092371-91092390 | MsG0180005382.01.T01:CDS | 40.0% | |
| TGGATAAGTGCTTCAGAACT+TGG | - | Chr1:91091909-91091928 | None:intergenic | 40.0% | |
| TTCTGCCAAAGTGGTTGAAA+AGG | + | Chr1:91092370-91092389 | MsG0180005382.01.T01:CDS | 40.0% | |
| ! | GAAGCACTTATCCAGAAAAC+TGG | + | Chr1:91091915-91091934 | MsG0180005382.01.T01:CDS | 40.0% |
| ! | TGCAGGCTTTATGGATTCAT+TGG | + | Chr1:91092139-91092158 | MsG0180005382.01.T01:CDS | 40.0% |
| !! | TATATGGCGGATTTGGTCTT+TGG | + | Chr1:91092231-91092250 | MsG0180005382.01.T01:CDS | 40.0% |
| ACTTATCCAGAAAACTGGCG+AGG | + | Chr1:91091920-91091939 | MsG0180005382.01.T01:CDS | 45.0% | |
| GGAAGGAATCTCAGAAGATG+TGG | - | Chr1:91092399-91092418 | None:intergenic | 45.0% | |
| TCAAGCAAGACTACGTGAGA+TGG | + | Chr1:91092307-91092326 | MsG0180005382.01.T01:CDS | 45.0% | |
| ! | GGAACCCTTTTCAACCACTT+TGG | - | Chr1:91092378-91092397 | None:intergenic | 45.0% |
| !! | TGGTTGATTTGCCATGTCCT+TGG | - | Chr1:91092036-91092055 | None:intergenic | 45.0% |
| AAGTTCTGCAGCACCTATCC+TGG | + | Chr1:91092079-91092098 | MsG0180005382.01.T01:CDS | 50.0% | |
| ACCTATCCTGGAAACTGGTG+AGG | + | Chr1:91092091-91092110 | MsG0180005382.01.T01:CDS | 50.0% | |
| ACTGGCGAGGATCAAGTAGT+CGG | + | Chr1:91091933-91091952 | MsG0180005382.01.T01:CDS | 50.0% | |
| ACTGGTGAGGACCAAGTAGT+CGG | + | Chr1:91092104-91092123 | MsG0180005382.01.T01:CDS | 50.0% | |
| AGCTTCTTAGGACAGAGGAC+AGG | + | Chr1:91092273-91092292 | MsG0180005382.01.T01:CDS | 50.0% | |
| CTCTTCTGCTACGGGCTTTA+TGG | + | Chr1:91091959-91091978 | MsG0180005382.01.T01:CDS | 50.0% | |
| GAATCCATAAAGCCTGCAGC+AGG | - | Chr1:91092137-91092156 | None:intergenic | 50.0% | |
| GCTTCTTAGGACAGAGGACA+GGG | + | Chr1:91092274-91092293 | MsG0180005382.01.T01:CDS | 50.0% | |
| TCCTCACCAGTTTCCAGGAT+AGG | - | Chr1:91092095-91092114 | None:intergenic | 50.0% | |
| TTAGGACAGAGGACAGGGTA+CGG | + | Chr1:91092279-91092298 | MsG0180005382.01.T01:CDS | 50.0% | |
| ! | AGGATAGGTGCTGCAGAACT+TGG | - | Chr1:91092080-91092099 | None:intergenic | 50.0% |
| ! | CTTGATCCTCGCCAGTTTTC+TGG | - | Chr1:91091929-91091948 | None:intergenic | 50.0% |
| ! | TGATTTGCCATGTCCTTGGC+TGG | - | Chr1:91092032-91092051 | None:intergenic | 50.0% |
| AGTCGGTGGCTCTTCTGCTA+CGG | + | Chr1:91091950-91091969 | MsG0180005382.01.T01:CDS | 55.0% | |
| CATAAAGCCTGCAGCAGGAG+GGG | - | Chr1:91092132-91092151 | None:intergenic | 55.0% | |
| CCATAAAGCCTGCAGCAGGA+GGG | - | Chr1:91092133-91092152 | None:intergenic | 55.0% | |
| CTTGGTCCTCACCAGTTTCC+AGG | - | Chr1:91092100-91092119 | None:intergenic | 55.0% | |
| GAACACTCCAGCCAAGGACA+TGG | + | Chr1:91092022-91092041 | MsG0180005382.01.T01:CDS | 55.0% | |
| GCAGCACCTATCCTGGAAAC+TGG | + | Chr1:91092086-91092105 | MsG0180005382.01.T01:CDS | 55.0% | |
| TAGCTGGAACACTCCAGCCA+AGG | + | Chr1:91092016-91092035 | MsG0180005382.01.T01:CDS | 55.0% | |
| TAGGACAGAGGACAGGGTAC+GGG | + | Chr1:91092280-91092299 | MsG0180005382.01.T01:CDS | 55.0% | |
| TCCATAAAGCCTGCAGCAGG+AGG | - | Chr1:91092134-91092153 | None:intergenic | 55.0% | |
| CCCTCCTGCTGCAGGCTTTA+TGG | + | Chr1:91092130-91092149 | MsG0180005382.01.T01:CDS | 60.0% | |
| GGCGAGGATCAAGTAGTCGG+TGG | + | Chr1:91091936-91091955 | MsG0180005382.01.T01:CDS | 60.0% | |
| GTCGGTGGCTCTTCTGCTAC+GGG | + | Chr1:91091951-91091970 | MsG0180005382.01.T01:CDS | 60.0% | |
| !! | CAGGAGGGGCACCGACTACT+TGG | - | Chr1:91092118-91092137 | None:intergenic | 65.0% |
| ! | GTCGGTGCCCCTCCTGCTGC+AGG | + | Chr1:91092122-91092141 | MsG0180005382.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 91091870 | 91092424 | 91091870 | ID=MsG0180005382.01;Name=MsG0180005382.01 |
| Chr1 | mRNA | 91091870 | 91092424 | 91091870 | ID=MsG0180005382.01.T01;Parent=MsG0180005382.01;Name=MsG0180005382.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|184 |
| Chr1 | exon | 91091870 | 91092424 | 91091870 | ID=MsG0180005382.01.T01:exon:48129;Parent=MsG0180005382.01.T01 |
| Chr1 | CDS | 91091870 | 91092424 | 91091870 | ID=MsG0180005382.01.T01:cds;Parent=MsG0180005382.01.T01 |
| Gene Sequence |
| Protein sequence |
