AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011704.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011704.01.T01 MTR_3g009130 65.563 151 6 1 1 105 1 151 2.65e-53 168
MsG0380011704.01.T01 MTR_3g009150 57.343 143 25 3 103 212 65 204 5.51e-41 138
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011704.01.T01 AT2G31725 38.776 147 43 2 1 100 1 147 4.13e-30 108
MsG0380011704.01.T01 AT1G05730 37.584 149 46 2 1 102 1 149 1.34e-27 102
MsG0380011704.01.T01 AT2G43720 30.769 143 52 2 7 102 5 147 5.31e-18 77.8
MsG0380011704.01.T01 AT2G30695 55.932 59 26 0 154 212 139 197 4.81e-15 71.2
MsG0380011704.01.T01 AT2G30695 55.932 59 26 0 154 212 139 197 4.81e-15 71.2
MsG0380011704.01.T01 AT2G30695 55.932 59 26 0 154 212 139 197 4.81e-15 71.2
MsG0380011704.01.T01 AT1G05730 46.774 62 32 1 42 102 56 117 2.75e-13 64.3
MsG0380011704.01.T01 AT2G43720 34.091 88 51 2 22 102 21 108 1.56e-12 62.0

Find 69 sgRNAs with CRISPR-Local

Find 845 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTACGAAAGGGTTTA+AGG 0.111268 3:-3837416 None:intergenic
GGCGAAACACAAATGTTCTT+TGG 0.281477 3:-3852331 None:intergenic
ACCTCTAATAAAATGTCTTT+TGG 0.282309 3:-3850709 None:intergenic
CTGTGGTGTTCACCATTATT+AGG 0.284839 3:-3851955 None:intergenic
ACATTGTTTCCTCCTAATAA+TGG 0.328973 3:+3851943 MsG0380011704.01.T01:three_prime_UTR
TTCTCTACGAAAGGGTTTAA+GGG 0.340029 3:-3837415 None:intergenic
GGAAGGAAACAAACTGGGTT+TGG 0.342720 3:-3837499 None:intergenic
AATTAGGTCAACAGAGAATT+AGG 0.348786 3:+3839086 MsG0380011704.01.T01:CDS
GATGAGTGACATTGCTTCTT+CGG 0.356839 3:+3851783 MsG0380011704.01.T01:three_prime_UTR
CCTTCCAATCACACATTCTC+AGG 0.372472 3:+3837516 MsG0380011704.01.T01:five_prime_UTR
TTTATATGTTAAAATCTTAC+CGG 0.375682 3:+3851757 MsG0380011704.01.T01:three_prime_UTR
GCAGCAGCTGAAGCGCAATT+AGG 0.389975 3:+3839070 MsG0380011704.01.T01:CDS
AAAACGGGTAGAAGAAATTT+CGG 0.398596 3:-3848886 None:intergenic
TAATTGACATGGTCTTGAAC+AGG 0.399803 3:-3839154 None:intergenic
CTACAAAATGAATTTAACTT+TGG 0.404253 3:+3852142 MsG0380011704.01.T01:three_prime_UTR
ATATGCATATGCTGAAAATC+AGG 0.428883 3:-3852026 None:intergenic
CCTTTCCTCTTCTCTACGAA+AGG 0.441801 3:-3837424 None:intergenic
CTAACCTGAGAATGTGTGAT+TGG 0.446872 3:-3837520 None:intergenic
TTCTAGGAAGAACTGTTGTC+TGG 0.450400 3:-3842950 None:intergenic
TCATAGCTCCAGGTTTCTGT+TGG 0.458233 3:-3842835 None:intergenic
AACAAGTTGAAAGCTTCCTT+TGG 0.460762 3:+3842923 MsG0380011704.01.T01:CDS
TGATAACTTGATTAAAACAT+TGG 0.466852 3:-3850743 None:intergenic
GAAGTTGAATAGATCTATGA+TGG 0.466964 3:+3842781 MsG0380011704.01.T01:CDS
CTTTCCTCTTCTCTACGAAA+GGG 0.473730 3:-3837423 None:intergenic
GACAGAGAACTCCTCAAAAC+GGG 0.474763 3:-3848901 None:intergenic
AGATCTTGAAACTACATTTG+AGG 0.477759 3:+3851675 MsG0380011704.01.T01:CDS
ATCATATCATTCATAGCTCC+AGG 0.479620 3:-3842845 None:intergenic
ATCTCTTAAAATGATTCAAA+AGG 0.483967 3:+3851819 MsG0380011704.01.T01:three_prime_UTR
GTGATTGGAAGGAAACAAAC+TGG 0.491174 3:-3837505 None:intergenic
CTCAACTGTGGCTGAGTATG+TGG 0.495219 3:+3850779 MsG0380011704.01.T01:CDS
TCAAAGCTCCAACAGAAACC+TGG 0.503368 3:+3842827 MsG0380011704.01.T01:CDS
CTCAGGATTCCATCGATGCA+TGG 0.508752 3:+3852063 MsG0380011704.01.T01:three_prime_UTR
GGTTTGTCAAGACAAGTATG+AGG 0.511683 3:+3842802 MsG0380011704.01.T01:CDS
AGACAGAGAACTCCTCAAAA+CGG 0.513489 3:-3848902 None:intergenic
GGACATCACTCTACAAACTC+TGG 0.519633 3:+3852095 MsG0380011704.01.T01:three_prime_UTR
CCATGTCAATTATACTCTCC+AGG 0.522500 3:+3839165 MsG0380011704.01.T01:CDS
AAAACCACGGTGGCATTTCG+TGG 0.524406 3:+3851882 MsG0380011704.01.T01:three_prime_UTR
TTGAATCGCTTCGTCAGCAC+AGG 0.525639 3:-3842870 None:intergenic
GCTTCAAGAGTAGAATTGAC+AGG 0.526569 3:+3851732 MsG0380011704.01.T01:exon
CGATGATGTTAGAGAACTAA+AGG 0.528783 3:+3848938 MsG0380011704.01.T01:CDS
AGCAATGTCACTCATCCATC+CGG 0.530071 3:-3851776 None:intergenic
TATGTTAAAATCTTACCGGA+TGG 0.533410 3:+3851761 MsG0380011704.01.T01:three_prime_UTR
ATCGATGCATGGGAAAACTT+AGG 0.534930 3:+3852074 MsG0380011704.01.T01:three_prime_UTR
TAAACCCTTTCGTAGAGAAG+AGG 0.539246 3:+3837419 MsG0380011704.01.T01:five_prime_UTR
TCAGGATTCCATCGATGCAT+GGG 0.540440 3:+3852064 MsG0380011704.01.T01:three_prime_UTR
AACTTGATTAAAACATTGGA+AGG 0.544432 3:-3850739 None:intergenic
TTCAACTTGTTCGTAAGAAG+CGG 0.544894 3:-3842911 None:intergenic
CCTGAGAATGTGTGATTGGA+AGG 0.545691 3:-3837516 None:intergenic
CTTGAAACTACATTTGAGGA+AGG 0.550589 3:+3851679 MsG0380011704.01.T01:CDS
CTTTAGTTCTCTAACATCAT+CGG 0.553978 3:-3848937 None:intergenic
TGCTTCTTCGGTCTGAACCA+AGG 0.577590 3:+3851795 MsG0380011704.01.T01:three_prime_UTR
GAGAATTAGGCAGAAACTTG+AGG 0.580267 3:+3839099 MsG0380011704.01.T01:CDS
ATCTCTTGAAAGCAATGTAG+TGG 0.582364 3:+3852173 MsG0380011704.01.T01:three_prime_UTR
AATTGACATGGTCTTGAACA+GGG 0.588865 3:-3839153 None:intergenic
TGTTGTTGAAAATTCTTATG+CGG 0.592133 3:-3837447 None:intergenic
GTAGTTCTCAAAATCATCTG+CGG 0.599030 3:-3852123 None:intergenic
TTTACAGTGAGTATATCAGA+TGG 0.601534 3:+3839039 MsG0380011704.01.T01:intron
CCTGGAGAGTATAATTGACA+TGG 0.606570 3:-3839165 None:intergenic
TGGTGTTCACCATTATTAGG+AGG 0.607833 3:-3851952 None:intergenic
ATTGACATGGTCTTGAACAG+GGG 0.619900 3:-3839152 None:intergenic
TGTGGCTGAGTATGTGGAGA+AGG 0.628591 3:+3850785 MsG0380011704.01.T01:CDS
ACTGTTGTCTGGAATGCCAA+AGG 0.633485 3:-3842939 None:intergenic
GGAAATAATCAACTCAACTG+TGG 0.634122 3:+3850767 MsG0380011704.01.T01:CDS
GTTTGTCAAGACAAGTATGA+GGG 0.640452 3:+3842803 MsG0380011704.01.T01:CDS
CCTTTCGTAGAGAAGAGGAA+AGG 0.668318 3:+3837424 MsG0380011704.01.T01:five_prime_UTR
TGATTGGAAGGAAACAAACT+GGG 0.705523 3:-3837504 None:intergenic
ATAACCACGAAATGCCACCG+TGG 0.761985 3:-3851886 None:intergenic
TGTCATCTAAGTGAAAACCA+CGG 0.770313 3:+3851869 MsG0380011704.01.T01:three_prime_UTR
CATCTAAGTGAAAACCACGG+TGG 0.816103 3:+3851872 MsG0380011704.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAATTAATTAATTTTTA+CGG + Chr3:3847233-3847252 MsG0380011704.01.T01:intron 0.0%
!!! TTAATTTATTTTTTAATTAT+AGG + Chr3:3851318-3851337 MsG0380011704.01.T01:intron 0.0%
!!! TTTTATTTTAATTTTTAAAA+TGG - Chr3:3843492-3843511 None:intergenic 0.0%
!! AACTATAAATACATAAAAAT+AGG - Chr3:3850406-3850425 None:intergenic 10.0%
!! AATTTGAATCAAAATAAAAA+AGG - Chr3:3839386-3839405 None:intergenic 10.0%
!! ATTAAAATAAGATTAATAAG+AGG - Chr3:3844283-3844302 None:intergenic 10.0%
!! TTAATTATAATGAAATTTCA+CGG + Chr3:3846167-3846186 MsG0380011704.01.T01:intron 10.0%
!!! AAATTAAATTTAACTTAACA+AGG - Chr3:3845497-3845516 None:intergenic 10.0%
!!! AATTAAATTTAACTTAACAA+GGG - Chr3:3845496-3845515 None:intergenic 10.0%
!!! AATTTTTAAAATGGTTATTA+AGG - Chr3:3843483-3843502 None:intergenic 10.0%
!!! AGTATTTTTATTTTTTTCAT+TGG + Chr3:3851356-3851375 MsG0380011704.01.T01:intron 10.0%
!!! ATTATTTGTGTAAATTTTTT+CGG + Chr3:3848585-3848604 MsG0380011704.01.T01:intron 10.0%
!!! TATTATTATCATTTTCTATT+TGG - Chr3:3850156-3850175 None:intergenic 10.0%
!!! TTATAAGTTTGATTTTTTAT+CGG + Chr3:3838815-3838834 MsG0380011704.01.T01:intron 10.0%
!!! TTATTGTTTAAAATTTTAGA+AGG + Chr3:3845808-3845827 MsG0380011704.01.T01:intron 10.0%
!!! TTTGAAATTTTAATATAGAT+AGG + Chr3:3839540-3839559 MsG0380011704.01.T01:intron 10.0%
!! AAAAATCAAACTTATAAGTA+TGG - Chr3:3838812-3838831 None:intergenic 15.0%
!! AAATGATAACAAAATTTATC+AGG - Chr3:3844559-3844578 None:intergenic 15.0%
!! AAATTCTATTTATCAGTAAA+AGG - Chr3:3839602-3839621 None:intergenic 15.0%
!! AACAATGAAATTTAATTGAA+TGG - Chr3:3851284-3851303 None:intergenic 15.0%
!! AACTGAATGAAAAAAATAAT+AGG + Chr3:3844169-3844188 MsG0380011704.01.T01:intron 15.0%
!! AAGATAAAGCAAAATAATAA+AGG - Chr3:3846915-3846934 None:intergenic 15.0%
!! AATTCTATTTATCAGTAAAA+GGG - Chr3:3839601-3839620 None:intergenic 15.0%
!! ACGTCATTATTTATATAAAA+CGG + Chr3:3843161-3843180 MsG0380011704.01.T01:intron 15.0%
!! AGATAAAGCAAAATAATAAA+GGG - Chr3:3846914-3846933 None:intergenic 15.0%
!! ATAAGCAAATTTATTCATAA+TGG - Chr3:3846599-3846618 None:intergenic 15.0%
!! ATATTTAAAGACTAATTGAT+AGG - Chr3:3847386-3847405 None:intergenic 15.0%
!! CAAGGTATAAATAAATAATT+TGG - Chr3:3842652-3842671 None:intergenic 15.0%
!! TAACATGTAAATTATAATCT+AGG - Chr3:3848839-3848858 None:intergenic 15.0%
!! TCAAAAGTTAAATTAATACA+AGG - Chr3:3842670-3842689 None:intergenic 15.0%
!! TGTTATTAACATATTTATAC+AGG - Chr3:3847170-3847189 None:intergenic 15.0%
!! TTTATATGTTAAAATCTTAC+CGG + Chr3:3851757-3851776 MsG0380011704.01.T01:three_prime_UTR 15.0%
!!! AAAAATAATTGTTTTGTTAC+AGG + Chr3:3837386-3837405 MsG0380011704.01.T01:five_prime_UTR 15.0%
!!! AAATTAATTTTCTATGATGT+GGG + Chr3:3841884-3841903 MsG0380011704.01.T01:intron 15.0%
!!! AATTTTGTTATCATTTCAAT+CGG + Chr3:3844563-3844582 MsG0380011704.01.T01:intron 15.0%
!!! AATTTTTCAATACTAACTTA+CGG - Chr3:3848550-3848569 None:intergenic 15.0%
!!! AGAAGATTAATTCATTTTTA+TGG + Chr3:3850659-3850678 MsG0380011704.01.T01:intron 15.0%
!!! ATATATTTTTATCCATCAAT+TGG - Chr3:3847413-3847432 None:intergenic 15.0%
!!! ATTTGGAATAATTTCATATA+TGG - Chr3:3846430-3846449 None:intergenic 15.0%
!!! GTACATTTTTTTTAACTTAA+TGG - Chr3:3845957-3845976 None:intergenic 15.0%
!!! TATATTTTTATCCATCAATT+GGG - Chr3:3847412-3847431 None:intergenic 15.0%
!!! TATTAAAATTTCAAAGCATT+TGG - Chr3:3839535-3839554 None:intergenic 15.0%
!!! TATTAGTCAAATTTTACTTT+TGG + Chr3:3843833-3843852 MsG0380011704.01.T01:intron 15.0%
!!! TATTCAAACTCAAATTTTAT+CGG + Chr3:3843661-3843680 MsG0380011704.01.T01:intron 15.0%
!!! TGTTGGAAATATTATTTTTT+AGG - Chr3:3845981-3846000 None:intergenic 15.0%
!!! TTAATTTTACTGTTGATTAA+AGG - Chr3:3846739-3846758 None:intergenic 15.0%
!!! TTGAAGTATTATTCTTATAA+AGG + Chr3:3845641-3845660 MsG0380011704.01.T01:intron 15.0%
!!! TTTATAATTCTTGGTTTTAA+AGG + Chr3:3839477-3839496 MsG0380011704.01.T01:intron 15.0%
!!! TTTGAATTGCTTTTAAAAAA+AGG - Chr3:3838551-3838570 None:intergenic 15.0%
!! AAAAAATTCTTAAGTTTGAG+TGG + Chr3:3840828-3840847 MsG0380011704.01.T01:intron 20.0%
!! AAAACCATTTAGAAAGATTA+AGG - Chr3:3840508-3840527 None:intergenic 20.0%
!! AAAGCAAAAAAATTGAAGAA+TGG - Chr3:3837563-3837582 None:intergenic 20.0%
!! AAATTATGAATAGGATATTG+TGG - Chr3:3844866-3844885 None:intergenic 20.0%
!! AATTATGAATAGGATATTGT+GGG - Chr3:3844865-3844884 None:intergenic 20.0%
!! AGACATTATTTAACTATTTC+TGG + Chr3:3843023-3843042 MsG0380011704.01.T01:intron 20.0%
!! AGATAACATGAATAATATTG+AGG + Chr3:3843687-3843706 MsG0380011704.01.T01:intron 20.0%
!! ATCTCTTAAAATGATTCAAA+AGG + Chr3:3851819-3851838 MsG0380011704.01.T01:three_prime_UTR 20.0%
!! ATTCTTATAAAGGATGTATT+AGG + Chr3:3845651-3845670 MsG0380011704.01.T01:intron 20.0%
!! ATTTAGAAAGATTAAGGAAA+TGG - Chr3:3840502-3840521 None:intergenic 20.0%
!! ATTTCCTTAATCTTTCTAAA+TGG + Chr3:3840501-3840520 MsG0380011704.01.T01:intron 20.0%
!! CACATCATAGAAAATTAATT+TGG - Chr3:3841885-3841904 None:intergenic 20.0%
!! CGTCATTATTTATATAAAAC+GGG + Chr3:3843162-3843181 MsG0380011704.01.T01:intron 20.0%
!! CTGAAAATGAGTTTATAAAT+GGG + Chr3:3849327-3849346 MsG0380011704.01.T01:intron 20.0%
!! GAAAAGAAATTGAAAGTAAA+AGG + Chr3:3843976-3843995 MsG0380011704.01.T01:intron 20.0%
!! GAAATACTATAATTAGCAAA+TGG - Chr3:3850818-3850837 None:intergenic 20.0%
!! GAAATGATTAAGATAGAAAA+AGG + Chr3:3841792-3841811 MsG0380011704.01.T01:intron 20.0%
!! GAATAAGCGTAATAAATTAT+AGG - Chr3:3842569-3842588 None:intergenic 20.0%
!! TAAAGAAAGAAACTTACATT+TGG - Chr3:3850356-3850375 None:intergenic 20.0%
!! TAATATAATAAACAGTTCGT+AGG + Chr3:3848297-3848316 MsG0380011704.01.T01:intron 20.0%
!! TAATTTCAACTTAAATGAGA+AGG + Chr3:3848476-3848495 MsG0380011704.01.T01:intron 20.0%
!! TAGAATCAAATTAAAAGAAG+TGG - Chr3:3839866-3839885 None:intergenic 20.0%
!! TATAAATAGCAAATTGAGAA+TGG + Chr3:3845120-3845139 MsG0380011704.01.T01:intron 20.0%
!! TCTGAAAATGAGTTTATAAA+TGG + Chr3:3849326-3849345 MsG0380011704.01.T01:intron 20.0%
!! TCTTTCATTGTAATATTGAA+TGG + Chr3:3839266-3839285 MsG0380011704.01.T01:intron 20.0%
!! TGAATAATATTGAGGATATA+AGG + Chr3:3843695-3843714 MsG0380011704.01.T01:intron 20.0%
!! TGAATCAAAATAAAAAAGGA+AGG - Chr3:3839382-3839401 None:intergenic 20.0%
!! TGAATGAAAAAAATAATAGG+AGG + Chr3:3844172-3844191 MsG0380011704.01.T01:intron 20.0%
!! TGAGAAAATAAAATCTTTCT+AGG - Chr3:3842969-3842988 None:intergenic 20.0%
!! TGATAACTTGATTAAAACAT+TGG - Chr3:3850746-3850765 None:intergenic 20.0%
!! TGGAAGAAAAAAACATAAAA+AGG - Chr3:3847800-3847819 None:intergenic 20.0%
!! TGTCTTTAATATCTGATTTA+AGG + Chr3:3837761-3837780 MsG0380011704.01.T01:intron 20.0%
!! TTGCATATAATGGTAATATT+CGG + Chr3:3839571-3839590 MsG0380011704.01.T01:intron 20.0%
!! TTTGGTAAAATTGGTAAAAT+AGG + Chr3:3846709-3846728 MsG0380011704.01.T01:intron 20.0%
!! TTTGGTAAAATTGGTAAAAT+AGG - Chr3:3846728-3846709 None:intergenic 20.0%
!!! AAATCCGTTTCTTTTTTTAT+AGG + Chr3:3848719-3848738 MsG0380011704.01.T01:intron 20.0%
!!! AAATTAAGTGTTGTAGAAAA+CGG - Chr3:3842042-3842061 None:intergenic 20.0%
!!! AAGAAAATCATGTTTTAACA+TGG - Chr3:3850532-3850551 None:intergenic 20.0%
!!! AAGATCATTTTTTTTATCCA+CGG + Chr3:3844240-3844259 MsG0380011704.01.T01:intron 20.0%
!!! AATCCGTTTCTTTTTTTATA+GGG + Chr3:3848720-3848739 MsG0380011704.01.T01:intron 20.0%
!!! ACACATTGTTTTTTATAATG+TGG - Chr3:3841838-3841857 None:intergenic 20.0%
!!! ACTTTTTTACCAAAATGATT+TGG - Chr3:3846447-3846466 None:intergenic 20.0%
!!! AGATCTTTTTACATGTTTTT+GGG + Chr3:3841858-3841877 MsG0380011704.01.T01:intron 20.0%
!!! ATAAACTCATGTCATTTATT+TGG + Chr3:3840287-3840306 MsG0380011704.01.T01:intron 20.0%
!!! ATGATTTTCTTGAATTGTAA+GGG + Chr3:3850541-3850560 MsG0380011704.01.T01:intron 20.0%
!!! ATGTTTTAATCAAGTTATCA+AGG + Chr3:3850746-3850765 MsG0380011704.01.T01:CDS 20.0%
!!! ATTATGCTTATTTTGATCTT+TGG + Chr3:3846691-3846710 MsG0380011704.01.T01:intron 20.0%
!!! ATTATGCTTATTTTGATCTT+TGG - Chr3:3846710-3846691 None:intergenic 20.0%
!!! ATTTAAGACCTTATAGTATA+TGG + Chr3:3837817-3837836 MsG0380011704.01.T01:intron 20.0%
!!! ATTTTGATCTTTGGTAAAAT+TGG + Chr3:3846700-3846719 MsG0380011704.01.T01:intron 20.0%
!!! ATTTTGATCTTTGGTAAAAT+TGG - Chr3:3846719-3846700 None:intergenic 20.0%
!!! ATTTTTCAATACTAACTTAC+GGG - Chr3:3848549-3848568 None:intergenic 20.0%
!!! CAAATTAATTTTCTATGATG+TGG + Chr3:3841883-3841902 MsG0380011704.01.T01:intron 20.0%
!!! CTACAAAATGAATTTAACTT+TGG + Chr3:3852142-3852161 MsG0380011704.01.T01:three_prime_UTR 20.0%
!!! CTTTCCTTTTTTATGTATAA+TGG - Chr3:3844004-3844023 None:intergenic 20.0%
!!! GAAATTATTCCAAATCATTT+TGG + Chr3:3846435-3846454 MsG0380011704.01.T01:intron 20.0%
!!! GCTTTCAATTTTATAGAATA+GGG + Chr3:3840074-3840093 MsG0380011704.01.T01:intron 20.0%
!!! GTAATATTGAATGGTTTTAT+TGG + Chr3:3839275-3839294 MsG0380011704.01.T01:intron 20.0%
!!! GTATTATGTGGATTTTAAAT+TGG + Chr3:3849953-3849972 MsG0380011704.01.T01:intron 20.0%
!!! GTATTTTTTATAAGCATAGT+AGG - Chr3:3846627-3846646 None:intergenic 20.0%
!!! TAGATCTTTTTACATGTTTT+TGG + Chr3:3841857-3841876 MsG0380011704.01.T01:intron 20.0%
!!! TGAGGGTTTTTTAATTAAAT+AGG + Chr3:3848346-3848365 MsG0380011704.01.T01:intron 20.0%
!!! TGCTTTCAATTTTATAGAAT+AGG + Chr3:3840073-3840092 MsG0380011704.01.T01:intron 20.0%
!!! TGTTTTTTATAATGTGGAAA+AGG - Chr3:3841832-3841851 None:intergenic 20.0%
!!! TTCATAAATTTTTCAGTAGT+TGG + Chr3:3842070-3842089 MsG0380011704.01.T01:intron 20.0%
!!! TTTTGGATAAACAACTAATT+AGG + Chr3:3848098-3848117 MsG0380011704.01.T01:intron 20.0%
!!! TTTTTCAAACAAGAAAGTTT+AGG - Chr3:3838350-3838369 None:intergenic 20.0%
! AAAAAACTACCACTAAATTG+AGG + Chr3:3845832-3845851 MsG0380011704.01.T01:intron 25.0%
! AAATTGTCACATACCATTAT+TGG + Chr3:3851207-3851226 MsG0380011704.01.T01:intron 25.0%
! AACATTGCTATGTAATTTCA+TGG - Chr3:3850856-3850875 None:intergenic 25.0%
! AACTAAAAACAAACTCCAAA+TGG + Chr3:3843563-3843582 MsG0380011704.01.T01:intron 25.0%
! AACTTAGCTATTTACATGAT+TGG + Chr3:3844323-3844342 MsG0380011704.01.T01:intron 25.0%
! AACTTGATTAAAACATTGGA+AGG - Chr3:3850742-3850761 None:intergenic 25.0%
! AATAAACACCACTATTAGAT+CGG + Chr3:3843229-3843248 MsG0380011704.01.T01:intron 25.0%
! AATAGGGAAAAACAAATCAA+AGG - Chr3:3837673-3837692 None:intergenic 25.0%
! ACACAAATAATGAGTCAATT+TGG - Chr3:3848576-3848595 None:intergenic 25.0%
! ACGAAGAGAAAATCAAAATA+GGG - Chr3:3837689-3837708 None:intergenic 25.0%
! ACGTTAGTAGATATTATGAA+AGG + Chr3:3850071-3850090 MsG0380011704.01.T01:intron 25.0%
! ACTCATATGCACATTAAAAT+AGG - Chr3:3839667-3839686 None:intergenic 25.0%
! AGAACATAAAGATCATAAGA+AGG - Chr3:3851098-3851117 None:intergenic 25.0%
! AGAAGGATATAAACCAATAA+TGG - Chr3:3851223-3851242 None:intergenic 25.0%
! AGGAACATATAATACATTCA+TGG - Chr3:3841545-3841564 None:intergenic 25.0%
! AGGATTGAAATAACTTATGA+AGG - Chr3:3848819-3848838 None:intergenic 25.0%
! AGTTACAAGAAAACCAAAAA+GGG - Chr3:3841339-3841358 None:intergenic 25.0%
! ATAGGGAAAAACAAATCAAA+GGG - Chr3:3837672-3837691 None:intergenic 25.0%
! ATATATGCATAAAAAAGCCA+TGG - Chr3:3842254-3842273 None:intergenic 25.0%
! ATCAAATTGATGAGTATGAT+AGG - Chr3:3847319-3847338 None:intergenic 25.0%
! ATCAGAGAATATATCTATTG+AGG - Chr3:3842000-3842019 None:intergenic 25.0%
! ATCTCTTAGCTATTAATTTC+TGG + Chr3:3846319-3846338 MsG0380011704.01.T01:intron 25.0%
! ATTACAGTCTCAATTGTATT+CGG + Chr3:3842155-3842174 MsG0380011704.01.T01:intron 25.0%
! ATTCATAGTACTTAACATTG+TGG + Chr3:3840719-3840738 MsG0380011704.01.T01:intron 25.0%
! CAATCAAACAATCAACAATA+CGG - Chr3:3839630-3839649 None:intergenic 25.0%
! CAATGTGTTATGAAGAAAAT+TGG - Chr3:3844116-3844135 None:intergenic 25.0%
! CACAAATCAAAATTTAGAGA+TGG - Chr3:3841575-3841594 None:intergenic 25.0%
! CACTATTAGATGTAAAAGTT+AGG + Chr3:3844622-3844641 MsG0380011704.01.T01:intron 25.0%
! CATAACACATTGAAATGAAA+GGG + Chr3:3844124-3844143 MsG0380011704.01.T01:intron 25.0%
! CTAACAGTATGTTATCTTAT+AGG + Chr3:3847581-3847600 MsG0380011704.01.T01:intron 25.0%
! CTTATGAAAAGGTCTTTATA+AGG + Chr3:3848383-3848402 MsG0380011704.01.T01:intron 25.0%
! GCAAATTTATTCATAATGGT+TGG - Chr3:3846595-3846614 None:intergenic 25.0%
! GCTTATTATTGTCCAATATT+TGG + Chr3:3840768-3840787 MsG0380011704.01.T01:intron 25.0%
! GGAACCATTATACATAAAAA+AGG + Chr3:3843997-3844016 MsG0380011704.01.T01:intron 25.0%
! GTAAACATGTGTTTATAAGT+GGG - Chr3:3837984-3838003 None:intergenic 25.0%
! GTAGTTCATATTTAGGAATT+AGG - Chr3:3839443-3839462 None:intergenic 25.0%
! GTTCCCTATAAAAAAAGAAA+CGG - Chr3:3848726-3848745 None:intergenic 25.0%
! TAAAAAGGAGAAGAGTAAAA+AGG - Chr3:3847785-3847804 None:intergenic 25.0%
! TAAAATATGCCTCAATTTAG+TGG - Chr3:3845844-3845863 None:intergenic 25.0%
! TAAACATGTGTTTATAAGTG+GGG - Chr3:3837983-3838002 None:intergenic 25.0%
! TAACTTACTAAATAGACTTG+TGG - Chr3:3849365-3849384 None:intergenic 25.0%
! TAATGTCATAAGTACTTCAA+TGG + Chr3:3839203-3839222 MsG0380011704.01.T01:intron 25.0%
! TACAAACCATATTACAAAGT+GGG - Chr3:3849169-3849188 None:intergenic 25.0%
! TCAACCATAGAATTAAAAGT+AGG - Chr3:3840892-3840911 None:intergenic 25.0%
! TCATAACACATTGAAATGAA+AGG + Chr3:3844123-3844142 MsG0380011704.01.T01:intron 25.0%
! TCATGTAGTAGTTCATATTT+AGG - Chr3:3839450-3839469 None:intergenic 25.0%
! TGTTGTTGAAAATTCTTATG+CGG - Chr3:3837450-3837469 None:intergenic 25.0%
! TTAAATATAGACCCAATTGA+TGG + Chr3:3847398-3847417 MsG0380011704.01.T01:intron 25.0%
! TTAATAACCGAATCTAGATA+TGG + Chr3:3845411-3845430 MsG0380011704.01.T01:intron 25.0%
! TTATAAGGTTATAGCTTTCA+TGG + Chr3:3848398-3848417 MsG0380011704.01.T01:intron 25.0%
! TTCAACTTACATATTCCATT+TGG - Chr3:3849472-3849491 None:intergenic 25.0%
! TTCTAACTTTAAATGATGAC+TGG + Chr3:3839881-3839900 MsG0380011704.01.T01:intron 25.0%
! TTGCTTAAATCAAGTATTTG+AGG + Chr3:3847642-3847661 MsG0380011704.01.T01:intron 25.0%
! TTTAGATAAACCACATAACT+TGG + Chr3:3845435-3845454 MsG0380011704.01.T01:intron 25.0%
! TTTATAAAAGACGTCTCATT+GGG - Chr3:3838444-3838463 None:intergenic 25.0%
! TTTATTCATAATGGTTGGAA+CGG - Chr3:3846590-3846609 None:intergenic 25.0%
! TTTCATCAGATAGAGAAAAT+AGG - Chr3:3840002-3840021 None:intergenic 25.0%
! TTTCTCTCACTAAAAAACTA+GGG + Chr3:3843434-3843453 MsG0380011704.01.T01:intron 25.0%
!! AAACCACTATTTTCTACAAT+CGG + Chr3:3851517-3851536 MsG0380011704.01.T01:intron 25.0%
!! AACTTTTACATCTAATAGTG+TGG - Chr3:3844622-3844641 None:intergenic 25.0%
!! AAGACACAGTTTAGTTTAAT+AGG + Chr3:3850605-3850624 MsG0380011704.01.T01:intron 25.0%
!! AAGATTTCAATCTGAAATGT+CGG - Chr3:3842433-3842452 None:intergenic 25.0%
!! AAGGAAAAACTGATAGATTT+TGG - Chr3:3851079-3851098 None:intergenic 25.0%
!! AATGTAGTGGTATTTTCTTT+TGG + Chr3:3852186-3852205 MsG0380011704.01.T01:three_prime_UTR 25.0%
!! ACCAAAAGACATTTTATTAG+AGG + Chr3:3850708-3850727 MsG0380011704.01.T01:CDS 25.0%
!! ACCTCTAATAAAATGTCTTT+TGG - Chr3:3850712-3850731 None:intergenic 25.0%
!! ATAGTTTTCCACTTATGAAA+AGG + Chr3:3848372-3848391 MsG0380011704.01.T01:intron 25.0%
!! ATGTTTGGAATTGTTTGTAA+TGG + Chr3:3846128-3846147 MsG0380011704.01.T01:intron 25.0%
!! CATGATTTTCTTGAATTGTA+AGG + Chr3:3850540-3850559 MsG0380011704.01.T01:intron 25.0%
!! CCATTTTCTCAAATTATTAC+CGG + Chr3:3842506-3842525 MsG0380011704.01.T01:intron 25.0%
!! CTAAAGTACTAACTTTAAAG+AGG + Chr3:3838986-3839005 MsG0380011704.01.T01:intron 25.0%
!! GACATGTCTTTTATAATTCT+TGG + Chr3:3839468-3839487 MsG0380011704.01.T01:intron 25.0%
!! GTAAAAGAAAGTATATCGAA+TGG - Chr3:3841613-3841632 None:intergenic 25.0%
!! GTCTCAAAAATTGTTTCTTT+GGG + Chr3:3837711-3837730 MsG0380011704.01.T01:intron 25.0%
!! GTTTGAAATGAGTTATAAGT+GGG + Chr3:3849135-3849154 MsG0380011704.01.T01:intron 25.0%
!! GTTTGATTTAGATTTGTCAT+TGG - Chr3:3844706-3844725 None:intergenic 25.0%
!! TAAGAACCAAAACTTAGTTT+TGG - Chr3:3845682-3845701 None:intergenic 25.0%
!! TAGATCTTTGAAAGAATTGA+GGG - Chr3:3844437-3844456 None:intergenic 25.0%
!! TATAAAGACCTTTTCATAAG+TGG - Chr3:3848383-3848402 None:intergenic 25.0%
!! TATGTATTTGAAACCCTATT+CGG - Chr3:3851183-3851202 None:intergenic 25.0%
!! TCTAAAACCATATCTAGATT+CGG - Chr3:3845421-3845440 None:intergenic 25.0%
!! TTAATGTCTCTTTAAGAGTT+TGG + Chr3:3850490-3850509 MsG0380011704.01.T01:intron 25.0%
!! TTCAGCATATGCATATTTTA+AGG + Chr3:3852033-3852052 MsG0380011704.01.T01:three_prime_UTR 25.0%
!! TTTGAGTTTGAATATTCATG+TGG - Chr3:3843655-3843674 None:intergenic 25.0%
!!! AATCATTTTAAGAGATTCCT+TGG - Chr3:3851815-3851834 None:intergenic 25.0%
!!! AGAAACATGGTGTTATATAA+AGG + Chr3:3840388-3840407 MsG0380011704.01.T01:intron 25.0%
!!! ATGTTAAAATGGATTTTGCT+GGG + Chr3:3851591-3851610 MsG0380011704.01.T01:intron 25.0%
!!! ATGTTTAGTTCTAATCAAAG+TGG - Chr3:3840054-3840073 None:intergenic 25.0%
!!! ATTATTGGTTTATATCCTTC+TGG + Chr3:3851222-3851241 MsG0380011704.01.T01:intron 25.0%
!!! ATTTTGGTAACAAATCTATG+TGG - Chr3:3840123-3840142 None:intergenic 25.0%
!!! CTTATTTCTATCAAGTTCTT+AGG - Chr3:3848190-3848209 None:intergenic 25.0%
!!! CTTTGCTTGTTATGTTAAAA+TGG + Chr3:3851580-3851599 MsG0380011704.01.T01:intron 25.0%
!!! GTTTTAAGCTATAGTTTTCT+TGG + Chr3:3840523-3840542 MsG0380011704.01.T01:intron 25.0%
!!! TAGATATTATGAAAGGTACT+GGG + Chr3:3850078-3850097 MsG0380011704.01.T01:intron 25.0%
!!! TATAGCTCTAAGATAATGTT+TGG + Chr3:3846113-3846132 MsG0380011704.01.T01:intron 25.0%
!!! TATGTTAAAATGGATTTTGC+TGG + Chr3:3851590-3851609 MsG0380011704.01.T01:intron 25.0%
!!! TATTTTGATTTTCTCTTCGT+GGG + Chr3:3837689-3837708 MsG0380011704.01.T01:intron 25.0%
!!! TCATCCTACTTTTAATTCTA+TGG + Chr3:3840885-3840904 MsG0380011704.01.T01:intron 25.0%
!!! TGATGATGCATATTTTTTGT+TGG - Chr3:3845998-3846017 None:intergenic 25.0%
!!! TTACATATTCCATTTGGTTT+TGG - Chr3:3849466-3849485 None:intergenic 25.0%
!!! TTTACTTTTGGATAACGTTT+TGG + Chr3:3843845-3843864 MsG0380011704.01.T01:intron 25.0%
!!! TTTTTAGTACAGTTAGTGTT+TGG + Chr3:3851246-3851265 MsG0380011704.01.T01:intron 25.0%
!!! TTTTTGGTTTTCTTGTAACT+GGG + Chr3:3841339-3841358 MsG0380011704.01.T01:intron 25.0%
AAAAAAGGAAGGAAAAATGC+AGG - Chr3:3839371-3839390 None:intergenic 30.0%
AAAAATTCTGCAAGTCTCTA+TGG - Chr3:3846075-3846094 None:intergenic 30.0%
AAAACAATTTCATTCCAGAG+TGG + Chr3:3852235-3852254 MsG0380011704.01.T01:intron 30.0%
AAAACCCTTAAGTATGCATT+TGG + Chr3:3849620-3849639 MsG0380011704.01.T01:intron 30.0%
AAAACGGGTAGAAGAAATTT+CGG - Chr3:3848889-3848908 None:intergenic 30.0%
AAACAATTTCATTCCAGAGT+GGG + Chr3:3852236-3852255 MsG0380011704.01.T01:intron 30.0%
AAACATGTGTTTATAAGTGG+GGG - Chr3:3837982-3838001 None:intergenic 30.0%
AAAGAAAACAATCGACCATT+TGG - Chr3:3843581-3843600 None:intergenic 30.0%
AACTGTACTAAAAATCCAGA+AGG - Chr3:3851240-3851259 None:intergenic 30.0%
AAGACAAAAACACGGAATAA+AGG - Chr3:3840590-3840609 None:intergenic 30.0%
AATAAAGGACATTGACAGAA+GGG - Chr3:3840575-3840594 None:intergenic 30.0%
AATAAGCGAAAAACAACTCA+TGG + Chr3:3848204-3848223 MsG0380011704.01.T01:intron 30.0%
AATCATAGAAGATAGGCAAA+AGG + Chr3:3849015-3849034 MsG0380011704.01.T01:intron 30.0%
AATTAGGTCAACAGAGAATT+AGG + Chr3:3839086-3839105 MsG0380011704.01.T01:CDS 30.0%
ACAAACCATATTACAAAGTG+GGG - Chr3:3849168-3849187 None:intergenic 30.0%
ACACTATAGATCAAATACGA+AGG - Chr3:3842743-3842762 None:intergenic 30.0%
ACAGTATGTTATCTTATAGG+TGG + Chr3:3847584-3847603 MsG0380011704.01.T01:intron 30.0%
ACAGTCATTTGAAAATGAGA+TGG + Chr3:3839764-3839783 MsG0380011704.01.T01:intron 30.0%
ACATACACAACATTGATACA+CGG - Chr3:3838672-3838691 None:intergenic 30.0%
ACATTCATGGTAGTCAAAAT+CGG - Chr3:3841532-3841551 None:intergenic 30.0%
ACATTGTTTCCTCCTAATAA+TGG + Chr3:3851943-3851962 MsG0380011704.01.T01:three_prime_UTR 30.0%
AGACATATAAAGACAAACCA+CGG - Chr3:3841663-3841682 None:intergenic 30.0%
AGATCTTGAAACTACATTTG+AGG + Chr3:3851675-3851694 MsG0380011704.01.T01:CDS 30.0%
AGATGTATGTAGCAGTTATT+GGG + Chr3:3841201-3841220 MsG0380011704.01.T01:intron 30.0%
AGATGTGAAAAAGCTAGATA+TGG + Chr3:3846197-3846216 MsG0380011704.01.T01:intron 30.0%
AGCTAAGAAATTCACAATTG+AGG + Chr3:3847007-3847026 MsG0380011704.01.T01:intron 30.0%
ATATGCATATGCTGAAAATC+AGG - Chr3:3852029-3852048 None:intergenic 30.0%
ATCATAGAAGATAGGCAAAA+GGG + Chr3:3849016-3849035 MsG0380011704.01.T01:intron 30.0%
ATCGTTAAATAGTCCTACAT+CGG + Chr3:3841065-3841084 MsG0380011704.01.T01:intron 30.0%
ATGATTATTATCAGACTTGC+TGG - Chr3:3850191-3850210 None:intergenic 30.0%
ATTAACACCAATGAATTTGG+TGG + Chr3:3841295-3841314 MsG0380011704.01.T01:intron 30.0%
ATTAATACCGAATCTGGATA+TGG - Chr3:3844534-3844553 None:intergenic 30.0%
ATTCCAAGAAGTAGACTATA+TGG + Chr3:3849396-3849415 MsG0380011704.01.T01:intron 30.0%
ATTGAAATCTTCTCCAGTAT+CGG + Chr3:3842442-3842461 MsG0380011704.01.T01:intron 30.0%
ATTGATGAGTATGATAGGTT+AGG - Chr3:3847314-3847333 None:intergenic 30.0%
CAAAATTTAGAGATGGCAAT+TGG - Chr3:3841568-3841587 None:intergenic 30.0%
CACGAAGAGAAAATCAAAAT+AGG - Chr3:3837690-3837709 None:intergenic 30.0%
CACTTTGTATAATGAACCTA+AGG + Chr3:3840933-3840952 MsG0380011704.01.T01:intron 30.0%
CAGATAGAGAAAATAGGAAA+GGG - Chr3:3839996-3840015 None:intergenic 30.0%
CAGTTACAAGAAAACCAAAA+AGG - Chr3:3841340-3841359 None:intergenic 30.0%
CATATTGCTGCTAAAAAATG+AGG + Chr3:3850315-3850334 MsG0380011704.01.T01:intron 30.0%
CCGGTAATAATTTGAGAAAA+TGG - Chr3:3842509-3842528 None:intergenic 30.0%
CGAAGAACTTTAAATAGTGA+GGG + Chr3:3848978-3848997 MsG0380011704.01.T01:intron 30.0%
CGTAAACATGTGTTTATAAG+TGG - Chr3:3837985-3838004 None:intergenic 30.0%
CTACAAACCATATTACAAAG+TGG - Chr3:3849170-3849189 None:intergenic 30.0%
CTACTTCTTGGAATTTAGTT+TGG - Chr3:3849390-3849409 None:intergenic 30.0%
CTAGAATTTAGTTGAGGTAT+TGG - Chr3:3847094-3847113 None:intergenic 30.0%
CTATTGAGGTAAGCAAAATT+AGG - Chr3:3841986-3842005 None:intergenic 30.0%
CTGAGAATGTGTTTATAAGT+GGG + Chr3:3841100-3841119 MsG0380011704.01.T01:intron 30.0%
CTGATATACTCACTGTAAAT+GGG - Chr3:3839038-3839057 None:intergenic 30.0%
CTTTATAAAAGACGTCTCAT+TGG - Chr3:3838445-3838464 None:intergenic 30.0%
GAAAACATATGTTGAGTGAT+AGG - Chr3:3846276-3846295 None:intergenic 30.0%
GAAGTTGAATAGATCTATGA+TGG + Chr3:3842781-3842800 MsG0380011704.01.T01:CDS 30.0%
GAATGGTCATAATCAATTCT+TGG - Chr3:3845362-3845381 None:intergenic 30.0%
GAGGAAGACAAGTATAAAAA+TGG - Chr3:3840158-3840177 None:intergenic 30.0%
GATACTTGTAGTAAATTGCA+AGG + Chr3:3845227-3845246 MsG0380011704.01.T01:intron 30.0%
GCTAAGAAATTCACAATTGA+GGG + Chr3:3847008-3847027 MsG0380011704.01.T01:intron 30.0%
GGGAAAAAATCATAGAAGAT+AGG + Chr3:3849008-3849027 MsG0380011704.01.T01:intron 30.0%
GGTACTTCATAAGTTCAAAT+TGG - Chr3:3843634-3843653 None:intergenic 30.0%
GTCATTAACACCAATGAATT+TGG + Chr3:3841292-3841311 MsG0380011704.01.T01:intron 30.0%
GTGAATCGCAAATTATGAAT+AGG - Chr3:3844875-3844894 None:intergenic 30.0%
GTTCATTATACAAAGTGACA+GGG - Chr3:3840930-3840949 None:intergenic 30.0%
GTTTCTCTCACTAAAAAACT+AGG + Chr3:3843433-3843452 MsG0380011704.01.T01:intron 30.0%
TAAATAGTAGGATCGTAACA+CGG + Chr3:3841036-3841055 MsG0380011704.01.T01:intron 30.0%
TAATAAGCAAGCAAACTTCT+TGG - Chr3:3840756-3840775 None:intergenic 30.0%
TACATCTAATAGTGTGGTTA+TGG - Chr3:3844616-3844635 None:intergenic 30.0%
TACCATAAAGAACAAGACAA+TGG - Chr3:3847820-3847839 None:intergenic 30.0%
TAGCAGAAATTTGACAACAA+TGG + Chr3:3840470-3840489 MsG0380011704.01.T01:intron 30.0%
TATAAAGGATAAAGCCATGA+AGG + Chr3:3838458-3838477 MsG0380011704.01.T01:intron 30.0%
TATAATGATTACCAGGAATG+TGG - Chr3:3844767-3844786 None:intergenic 30.0%
TATACGATAACCTCAATCAT+AGG + Chr3:3846364-3846383 MsG0380011704.01.T01:intron 30.0%
TATAGGCACGTACAAATTAT+AGG + Chr3:3838933-3838952 MsG0380011704.01.T01:intron 30.0%
TATGTTAAAATCTTACCGGA+TGG + Chr3:3851761-3851780 MsG0380011704.01.T01:three_prime_UTR 30.0%
TCACATAAAGCAAGATAAGA+TGG - Chr3:3840697-3840716 None:intergenic 30.0%
TCAGATAGAGAAAATAGGAA+AGG - Chr3:3839997-3840016 None:intergenic 30.0%
TCATCCAAATGCATACTTAA+GGG - Chr3:3849627-3849646 None:intergenic 30.0%
TCCATTGAAAAGGTTGAAAA+TGG - Chr3:3843325-3843344 None:intergenic 30.0%
TCGAAGAACTTTAAATAGTG+AGG + Chr3:3848977-3848996 MsG0380011704.01.T01:intron 30.0%
TCTAAGAGTAACTTCTACAA+AGG - Chr3:3837901-3837920 None:intergenic 30.0%
TCTGATATACTCACTGTAAA+TGG - Chr3:3839039-3839058 None:intergenic 30.0%
TCTTCAGTTGCAAAAGAAAA+TGG + Chr3:3842996-3843015 MsG0380011704.01.T01:intron 30.0%
TGAAATAGAGACAAGAGAAA+AGG - Chr3:3839948-3839967 None:intergenic 30.0%
TGAGAAATAGATATAACCAG+AGG - Chr3:3844677-3844696 None:intergenic 30.0%
TGAGAATGTGTTTATAAGTG+GGG + Chr3:3841101-3841120 MsG0380011704.01.T01:intron 30.0%
TGTCATCCAAAAAAACCTAA+TGG + Chr3:3844348-3844367 MsG0380011704.01.T01:intron 30.0%
TGTGGGTTTCTTAATTTCTT+TGG + Chr3:3841901-3841920 MsG0380011704.01.T01:intron 30.0%
TGTTAAACCATATCCAGATT+CGG + Chr3:3844524-3844543 MsG0380011704.01.T01:intron 30.0%
TTAGTTACCAAGTAACATGA+TGG + Chr3:3845885-3845904 MsG0380011704.01.T01:intron 30.0%
TTATAGATCATCCATCAAAG+AGG - Chr3:3838250-3838269 None:intergenic 30.0%
TTGATGAGTATGATAGGTTA+GGG - Chr3:3847313-3847332 None:intergenic 30.0%
TTGTTGTCAAATTTCTGCTA+TGG - Chr3:3840470-3840489 None:intergenic 30.0%
TTTACAGTGAGTATATCAGA+TGG + Chr3:3839039-3839058 MsG0380011704.01.T01:intron 30.0%
! AAAATACTTGAAAGAGCACA+TGG - Chr3:3851344-3851363 None:intergenic 30.0%
! AATATCTGGTTAGTCAAACT+TGG - Chr3:3850110-3850129 None:intergenic 30.0%
! ACCATTTTCAACCTTTTCAA+TGG + Chr3:3843321-3843340 MsG0380011704.01.T01:intron 30.0%
! ACCTAGTCTAGAGTTTAAAT+GGG - Chr3:3842306-3842325 None:intergenic 30.0%
! ACTTTCTTTTACCTTTACTC+AGG + Chr3:3841621-3841640 MsG0380011704.01.T01:intron 30.0%
! AGAGCTGACTTTGATAATTA+GGG + Chr3:3847435-3847454 MsG0380011704.01.T01:intron 30.0%
! ATGGAATATGTAAGTTGAAG+TGG + Chr3:3849473-3849492 MsG0380011704.01.T01:intron 30.0%
! ATGGATGACGATTACAATTT+TGG - Chr3:3840139-3840158 None:intergenic 30.0%
! ATGTAAAGTGCAAAGTATTC+TGG - Chr3:3850952-3850971 None:intergenic 30.0%
! ATGTGGATTTTAAATTGGCA+TGG + Chr3:3849958-3849977 MsG0380011704.01.T01:intron 30.0%
! CAATGAGACGTCTTTTATAA+AGG + Chr3:3838443-3838462 MsG0380011704.01.T01:intron 30.0%
! CACTTTGTAATATGGTTTGT+AGG + Chr3:3849168-3849187 MsG0380011704.01.T01:intron 30.0%
! GATCTATAGTGTTTTCAACA+TGG + Chr3:3842751-3842770 MsG0380011704.01.T01:intron 30.0%
! GGTAATGCTTTTGCATATAA+TGG + Chr3:3839561-3839580 MsG0380011704.01.T01:intron 30.0%
! GGTCTCAAAAATTGTTTCTT+TGG + Chr3:3837710-3837729 MsG0380011704.01.T01:intron 30.0%
! GGTTTGAAATGAGTTATAAG+TGG + Chr3:3849134-3849153 MsG0380011704.01.T01:intron 30.0%
! GTAGATATTATGAAAGGTAC+TGG + Chr3:3850077-3850096 MsG0380011704.01.T01:intron 30.0%
! GTAGATCTTTGAAAGAATTG+AGG - Chr3:3844438-3844457 None:intergenic 30.0%
! TAAATCAAGTATTTGAGGTG+TGG + Chr3:3847647-3847666 MsG0380011704.01.T01:intron 30.0%
! TAGAGCTGACTTTGATAATT+AGG + Chr3:3847434-3847453 MsG0380011704.01.T01:intron 30.0%
! TAGTAATCAGTTCGAGTTTA+GGG + Chr3:3845265-3845284 MsG0380011704.01.T01:intron 30.0%
! TCCATTTTCAACCTTTTCAA+TGG + Chr3:3843383-3843402 MsG0380011704.01.T01:intron 30.0%
! TTAGTAATCAGTTCGAGTTT+AGG + Chr3:3845264-3845283 MsG0380011704.01.T01:intron 30.0%
! TTCAACCTTTTCAATGGAAA+GGG + Chr3:3843327-3843346 MsG0380011704.01.T01:intron 30.0%
! TTCCATTGTCTTGTTCTTTA+TGG + Chr3:3847815-3847834 MsG0380011704.01.T01:intron 30.0%
! TTCTTGACTTAGGACATTTT+TGG + Chr3:3848081-3848100 MsG0380011704.01.T01:intron 30.0%
! TTTCAACCTTTTCAATGGAA+AGG + Chr3:3843326-3843345 MsG0380011704.01.T01:intron 30.0%
!! AAAGTGGATTTTCAATGTAG+AGG + Chr3:3843206-3843225 MsG0380011704.01.T01:intron 30.0%
!! AATTCATTGGTGTTAATGAC+TGG - Chr3:3841292-3841311 None:intergenic 30.0%
!! AGATATTATGAAAGGTACTG+GGG + Chr3:3850079-3850098 MsG0380011704.01.T01:intron 30.0%
!! ATTAGCTTGTAAGCTTATGA+GGG + Chr3:3848329-3848348 MsG0380011704.01.T01:intron 30.0%
!! CTCATTTTAACCAAGTTATG+TGG - Chr3:3845448-3845467 None:intergenic 30.0%
!! CTCTCTAATTTGTTGATTCA+CGG + Chr3:3845741-3845760 MsG0380011704.01.T01:intron 30.0%
!! CTTTAGTTCTCTAACATCAT+CGG - Chr3:3848940-3848959 None:intergenic 30.0%
!! GCTTGCTTTACATTTTAAAG+TGG + Chr3:3843190-3843209 MsG0380011704.01.T01:intron 30.0%
!! GTGTAACGAAGATTTTGAAA+AGG + Chr3:3847959-3847978 MsG0380011704.01.T01:intron 30.0%
!! TGTTGCCATATAATTTTGGT+TGG - Chr3:3849206-3849225 None:intergenic 30.0%
!! TTAGTTCTAATCAAAGTGGA+TGG - Chr3:3840050-3840069 None:intergenic 30.0%
!! TTGATGATGTGTTCAGAAAA+TGG + Chr3:3849880-3849899 MsG0380011704.01.T01:intron 30.0%
!! TTTTTCCCACTAGTTGATAT+TGG + Chr3:3840243-3840262 MsG0380011704.01.T01:intron 30.0%
!!! CTATTTTGATTTTCTCTTCG+TGG + Chr3:3837688-3837707 MsG0380011704.01.T01:intron 30.0%
!!! CTTTTTGGTTTTCTTGTAAC+TGG + Chr3:3841338-3841357 MsG0380011704.01.T01:intron 30.0%
!!! GTTGCCATATAATTTTGGTT+GGG - Chr3:3849205-3849224 None:intergenic 30.0%
!!! TTTTGGTTTTCTTGTAACTG+GGG + Chr3:3841340-3841359 MsG0380011704.01.T01:intron 30.0%
AAAAATAAGTCCCCATTCCT+TGG + Chr3:3838374-3838393 MsG0380011704.01.T01:intron 35.0%
AAAAGGTGAGAAGCAAATAC+GGG + Chr3:3845299-3845318 MsG0380011704.01.T01:intron 35.0%
AAAATAAGTCCCCATTCCTT+GGG + Chr3:3838375-3838394 MsG0380011704.01.T01:intron 35.0%
AAACTTCAGCACGTAATATC+TGG - Chr3:3850124-3850143 None:intergenic 35.0%
AAATGAGATGGCAAAGTTTC+AGG + Chr3:3839776-3839795 MsG0380011704.01.T01:intron 35.0%
AACATAAGACTCTTTAGGTG+TGG - Chr3:3838151-3838170 None:intergenic 35.0%
AACATGTGTTTATAAGTGGG+GGG - Chr3:3837981-3838000 None:intergenic 35.0%
AACTCGTGAATAGTAAGTTG+TGG - Chr3:3844816-3844835 None:intergenic 35.0%
AAGAATGTGAATTGCAACGT+GGG + Chr3:3845166-3845185 MsG0380011704.01.T01:intron 35.0%
AAGGGAAAGAAAAATCAGTG+AGG + Chr3:3844142-3844161 MsG0380011704.01.T01:intron 35.0%
AAGGGTAGTCTAATAGTGAA+AGG - Chr3:3840557-3840576 None:intergenic 35.0%
AAGTCTGTGTGTATCAATGA+AGG + Chr3:3850448-3850467 MsG0380011704.01.T01:intron 35.0%
AATTTAGAGATGGCAATTGG+AGG - Chr3:3841565-3841584 None:intergenic 35.0%
ACAAGAAAGTTTAGGTGAGT+TGG - Chr3:3838342-3838361 None:intergenic 35.0%
ACATTCACAACCTATGATTG+AGG - Chr3:3846377-3846396 None:intergenic 35.0%
ACCTTATGTAATAGCAAGCA+TGG - Chr3:3850923-3850942 None:intergenic 35.0%
ACTCACACAAATACGATGTT+TGG + Chr3:3847133-3847152 MsG0380011704.01.T01:intron 35.0%
ACTTCTACAAAGGACAAAAC+CGG - Chr3:3837891-3837910 None:intergenic 35.0%
AGAACATCTTCTGTTGTCTA+AGG + Chr3:3851048-3851067 MsG0380011704.01.T01:intron 35.0%
AGAATGTGTTTATAAGTGGG+GGG + Chr3:3841103-3841122 MsG0380011704.01.T01:intron 35.0%
AGACTTATCTCATCCAATGT+GGG - Chr3:3849309-3849328 None:intergenic 35.0%
AGAGTAAAAAGGTTAACCTG+TGG - Chr3:3847774-3847793 None:intergenic 35.0%
AGATGATCAATGAGATTGTG+AGG - Chr3:3841939-3841958 None:intergenic 35.0%
AGGATATAAGGTTGTCTTTG+TGG + Chr3:3843707-3843726 MsG0380011704.01.T01:intron 35.0%
AGGGAAAGAAAAATCAGTGA+GGG + Chr3:3844143-3844162 MsG0380011704.01.T01:intron 35.0%
AGGTCATGCCATATACTATA+AGG - Chr3:3837828-3837847 None:intergenic 35.0%
AGGTTGAAAATGGATGTCTT+TGG - Chr3:3843377-3843396 None:intergenic 35.0%
AGTGGAGTATAATGATTACC+AGG - Chr3:3844774-3844793 None:intergenic 35.0%
ATACCATGGCTTCATTTGTA+TGG - Chr3:3842185-3842204 None:intergenic 35.0%
ATACTATGTAACATGACCTG+AGG + Chr3:3848039-3848058 MsG0380011704.01.T01:intron 35.0%
ATCATATCATTCATAGCTCC+AGG - Chr3:3842848-3842867 None:intergenic 35.0%
ATCATCACATCACTCTTTGT+GGG + Chr3:3846011-3846030 MsG0380011704.01.T01:intron 35.0%
ATCGATGAATCAAGATGCAT+CGG - Chr3:3843088-3843107 None:intergenic 35.0%
ATCTCTTGAAAGCAATGTAG+TGG + Chr3:3852173-3852192 MsG0380011704.01.T01:three_prime_UTR 35.0%
ATGTAGCCAATATCAACTAG+TGG - Chr3:3840252-3840271 None:intergenic 35.0%
CAAAAAATTAGCTAGCCAGA+TGG - Chr3:3839347-3839366 None:intergenic 35.0%
CAAGAAAGTTTAGGTGAGTT+GGG - Chr3:3838341-3838360 None:intergenic 35.0%
CAAGACAAGAATCACATTTG+AGG + Chr3:3847061-3847080 MsG0380011704.01.T01:intron 35.0%
CAATGCAAGTAAAGAATCGA+TGG + Chr3:3845385-3845404 MsG0380011704.01.T01:intron 35.0%
CACTTTGTGCTAATGCATAT+TGG - Chr3:3851441-3851460 None:intergenic 35.0%
CAGCCTATGACAGATATAAT+AGG - Chr3:3838784-3838803 None:intergenic 35.0%
CATCTTAAATCTAACTCCAC+AGG + Chr3:3847755-3847774 MsG0380011704.01.T01:intron 35.0%
CATGTCAAATGCTACCTAAA+AGG - Chr3:3851000-3851019 None:intergenic 35.0%
CCACTTATAAACACATTCTC+AGG - Chr3:3841102-3841121 None:intergenic 35.0%
CCTGAGAATGTGTTTATAAG+TGG + Chr3:3841099-3841118 MsG0380011704.01.T01:intron 35.0%
CGATGATGTTAGAGAACTAA+AGG + Chr3:3848938-3848957 MsG0380011704.01.T01:CDS 35.0%
CGTTCTATGACTCTCTATAA+GGG + Chr3:3846820-3846839 MsG0380011704.01.T01:intron 35.0%
CTAACTCAAGTCATTCCATT+TGG - Chr3:3849442-3849461 None:intergenic 35.0%
CTCATCCAAATGCATACTTA+AGG - Chr3:3849628-3849647 None:intergenic 35.0%
CTTAAGTATGCATTTGGATG+AGG + Chr3:3849626-3849645 MsG0380011704.01.T01:intron 35.0%
CTTGAAACTACATTTGAGGA+AGG + Chr3:3851679-3851698 MsG0380011704.01.T01:CDS 35.0%
CTTTACTTGCATTGGATGAA+TGG - Chr3:3845379-3845398 None:intergenic 35.0%
CTTTCATGGAGAAGTTAAAC+GGG + Chr3:3848412-3848431 MsG0380011704.01.T01:intron 35.0%
CTTTCCTCATTGAAATCTGT+TGG + Chr3:3847689-3847708 MsG0380011704.01.T01:intron 35.0%
GAAAAGGTGAGAAGCAAATA+CGG + Chr3:3845298-3845317 MsG0380011704.01.T01:intron 35.0%
GAAATGAGTTATAAGTGGGA+GGG + Chr3:3849139-3849158 MsG0380011704.01.T01:intron 35.0%
GAACGTGATATTCTTGACTT+AGG + Chr3:3848071-3848090 MsG0380011704.01.T01:intron 35.0%
GAAGTTACTCTTAGAAATCG+TGG + Chr3:3837906-3837925 MsG0380011704.01.T01:intron 35.0%
GAATAAAGGACATTGACAGA+AGG - Chr3:3840576-3840595 None:intergenic 35.0%
GAGAATGTGTTTATAAGTGG+GGG + Chr3:3841102-3841121 MsG0380011704.01.T01:intron 35.0%
GAGATGTATGTAGCAGTTAT+TGG + Chr3:3841200-3841219 MsG0380011704.01.T01:intron 35.0%
GATGTGTTTATAACTACCCT+TGG - Chr3:3838409-3838428 None:intergenic 35.0%
GCAAGAAAGTTAATACCATC+TGG + Chr3:3839329-3839348 MsG0380011704.01.T01:intron 35.0%
GCACCTATTATATCTGTCAT+AGG + Chr3:3838778-3838797 MsG0380011704.01.T01:intron 35.0%
GCTCTCCTATTTATCTCAAA+TGG - Chr3:3844073-3844092 None:intergenic 35.0%
GCTTTCATGGAGAAGTTAAA+CGG + Chr3:3848411-3848430 MsG0380011704.01.T01:intron 35.0%
GGAAATAATCAACTCAACTG+TGG + Chr3:3850767-3850786 MsG0380011704.01.T01:CDS 35.0%
GGGACAATGATCATTGTATT+GGG + Chr3:3841221-3841240 MsG0380011704.01.T01:intron 35.0%
GGTTCATTATACAAAGTGAC+AGG - Chr3:3840931-3840950 None:intergenic 35.0%
GTAACAAATCTATGTGGAAC+TGG - Chr3:3840117-3840136 None:intergenic 35.0%
GTAGAAAACGGCTAATAGTA+AGG - Chr3:3842030-3842049 None:intergenic 35.0%
GTAGTTCTCAAAATCATCTG+CGG - Chr3:3852126-3852145 None:intergenic 35.0%
GTCACAAGATCGTAAATAGT+AGG + Chr3:3841024-3841043 MsG0380011704.01.T01:intron 35.0%
GTCATCACATCTAACTTCTA+AGG + Chr3:3849754-3849773 MsG0380011704.01.T01:intron 35.0%
GTCCTACATTGGATAAAACA+TGG - Chr3:3838008-3838027 None:intergenic 35.0%
GTGAGACTATTTGAAAGCTA+TGG - Chr3:3848248-3848267 None:intergenic 35.0%
GTGGTTATTATCACAGATAG+AGG + Chr3:3847666-3847685 MsG0380011704.01.T01:intron 35.0%
GTTAAAATGAGCGACTACAT+AGG + Chr3:3845457-3845476 MsG0380011704.01.T01:intron 35.0%
GTTTGTCAAGACAAGTATGA+GGG + Chr3:3842803-3842822 MsG0380011704.01.T01:CDS 35.0%
TAAATAGACTTGTGGAGAGA+GGG - Chr3:3849357-3849376 None:intergenic 35.0%
TAAATAGTGAGGGAGAATGA+GGG + Chr3:3848988-3849007 MsG0380011704.01.T01:intron 35.0%
TAACATCCGCCACATAAATA+TGG + Chr3:3840349-3840368 MsG0380011704.01.T01:intron 35.0%
TACAAATGAAGCCATGGTAT+AGG + Chr3:3842185-3842204 MsG0380011704.01.T01:intron 35.0%
TACTATGTAACATGACCTGA+GGG + Chr3:3848040-3848059 MsG0380011704.01.T01:intron 35.0%
TACTCTTAGAAATCGTGGTT+GGG + Chr3:3837911-3837930 MsG0380011704.01.T01:intron 35.0%
TACTGTTAGCACAGCAAAAA+CGG - Chr3:3847570-3847589 None:intergenic 35.0%
TAGGCCCAACCAAAATTATA+TGG + Chr3:3849198-3849217 MsG0380011704.01.T01:intron 35.0%
TCAACTAGTGGGAAAAAACT+TGG - Chr3:3840240-3840259 None:intergenic 35.0%
TCACATTCTTTGATTGCTCA+GGG + Chr3:3848621-3848640 MsG0380011704.01.T01:intron 35.0%
TCATGAAGTGAGATTAGTAG+TGG - Chr3:3844792-3844811 None:intergenic 35.0%
TCGTTCTATGACTCTCTATA+AGG + Chr3:3846819-3846838 MsG0380011704.01.T01:intron 35.0%
TCTCCATATAGTCTACTTCT+TGG - Chr3:3849402-3849421 None:intergenic 35.0%
TCTTACACCATCATGTTACT+TGG - Chr3:3845895-3845914 None:intergenic 35.0%
TGAAAGCTGCTAGAAAATCA+AGG + Chr3:3842331-3842350 MsG0380011704.01.T01:intron 35.0%
TGAAATGAGTTATAAGTGGG+AGG + Chr3:3849138-3849157 MsG0380011704.01.T01:intron 35.0%
TGAGTTAGACCAAAACCAAA+TGG + Chr3:3849424-3849443 MsG0380011704.01.T01:intron 35.0%
TGATTGGAAGGAAACAAACT+GGG - Chr3:3837507-3837526 None:intergenic 35.0%
TGGAACTGGAAATCTAAACA+AGG - Chr3:3840103-3840122 None:intergenic 35.0%
TGGGACAATGATCATTGTAT+TGG + Chr3:3841220-3841239 MsG0380011704.01.T01:intron 35.0%
TGTAGCCAATATCAACTAGT+GGG - Chr3:3840251-3840270 None:intergenic 35.0%
TGTCATCTAAGTGAAAACCA+CGG + Chr3:3851869-3851888 MsG0380011704.01.T01:three_prime_UTR 35.0%
TGTGGAATGATTCTTTCTCT+CGG - Chr3:3843934-3843953 None:intergenic 35.0%
TTAAATAGTGAGGGAGAATG+AGG + Chr3:3848987-3849006 MsG0380011704.01.T01:intron 35.0%
TTAACACTACTCATTGCTCT+CGG - Chr3:3849091-3849110 None:intergenic 35.0%
TTACTCTTAGAAATCGTGGT+TGG + Chr3:3837910-3837929 MsG0380011704.01.T01:intron 35.0%
TTAGGGATTGTCAATGGAAA+AGG + Chr3:3845282-3845301 MsG0380011704.01.T01:intron 35.0%
TTATACTTGTCTTCCTCGTT+TGG + Chr3:3840161-3840180 MsG0380011704.01.T01:intron 35.0%
TTATTACTCGTTGAGCTTTG+AGG + Chr3:3838287-3838306 MsG0380011704.01.T01:intron 35.0%
TTCATTGATACACACAGACT+TGG - Chr3:3850449-3850468 None:intergenic 35.0%
TTCTCTACGAAAGGGTTTAA+GGG - Chr3:3837418-3837437 None:intergenic 35.0%
TTGGCAACATAAGACTCTTT+AGG - Chr3:3838156-3838175 None:intergenic 35.0%
TTTGAGAGTCGATTATGCAT+AGG - Chr3:3845707-3845726 None:intergenic 35.0%
TTTGTGCTAATGCATATTGG+TGG - Chr3:3851438-3851457 None:intergenic 35.0%
! AAAGGAGGTGAAGTATTATG+TGG + Chr3:3849941-3849960 MsG0380011704.01.T01:intron 35.0%
! AAAGGCATAATATGGGGTTA+TGG + Chr3:3849041-3849060 MsG0380011704.01.T01:intron 35.0%
! AAAGGGACAAAGGCATAATA+TGG + Chr3:3849033-3849052 MsG0380011704.01.T01:intron 35.0%
! AACAAGTTGAAAGCTTCCTT+TGG + Chr3:3842923-3842942 MsG0380011704.01.T01:CDS 35.0%
! AAGGGACAAAGGCATAATAT+GGG + Chr3:3849034-3849053 MsG0380011704.01.T01:intron 35.0%
! AATTGACATGGTCTTGAACA+GGG - Chr3:3839156-3839175 None:intergenic 35.0%
! AATTTCTTCTACCCGTTTTG+AGG + Chr3:3848890-3848909 MsG0380011704.01.T01:CDS 35.0%
! ACCTTTTCAATGGATGAAGA+TGG + Chr3:3843393-3843412 MsG0380011704.01.T01:intron 35.0%
! ACTGTAGAGATTCGTTTTAG+TGG - Chr3:3840629-3840648 None:intergenic 35.0%
! ATAGTGAAGCGTTAACAACT+CGG - Chr3:3842221-3842240 None:intergenic 35.0%
! CAGATTGATAACCTTAGCAA+AGG + Chr3:3849988-3850007 MsG0380011704.01.T01:intron 35.0%
! CAGCTCCATTTGAGATAAAT+AGG + Chr3:3844065-3844084 MsG0380011704.01.T01:intron 35.0%
! CCTAGTCTAGAGTTTAAATG+GGG - Chr3:3842305-3842324 None:intergenic 35.0%
! CCTTTTCAATGGATGAAGAT+GGG + Chr3:3843394-3843413 MsG0380011704.01.T01:intron 35.0%
! CTACGCATTCTGCAATTTTT+AGG - Chr3:3841408-3841427 None:intergenic 35.0%
! CTTTTACTCTACGAAATCCT+GGG - Chr3:3849925-3849944 None:intergenic 35.0%
! CTTTTCACAAACTGAAACTG+TGG - Chr3:3851975-3851994 None:intergenic 35.0%
! GACATTTTTCACGTGATTCT+TGG + Chr3:3850292-3850311 MsG0380011704.01.T01:intron 35.0%
! GACCTAGTCTAGAGTTTAAA+TGG - Chr3:3842307-3842326 None:intergenic 35.0%
! GAGCATCCAAAACTAAGTTT+TGG + Chr3:3845673-3845692 MsG0380011704.01.T01:intron 35.0%
! GCTCTGTTGCCATATAATTT+TGG - Chr3:3849210-3849229 None:intergenic 35.0%
! GGACACACATGTTTTGTATA+TGG + Chr3:3846841-3846860 MsG0380011704.01.T01:intron 35.0%
! GTAGTGGTATTTTCTTTTGG+AGG + Chr3:3852189-3852208 MsG0380011704.01.T01:three_prime_UTR 35.0%
! GTCTTGATTTTCCTATACCA+TGG - Chr3:3842199-3842218 None:intergenic 35.0%
! TAAAGAGTCTTATGTTGCCA+AGG + Chr3:3838155-3838174 MsG0380011704.01.T01:intron 35.0%
! TAATTGACATGGTCTTGAAC+AGG - Chr3:3839157-3839176 None:intergenic 35.0%
! TAGTGTTTTCAACATGGTAC+AGG + Chr3:3842757-3842776 MsG0380011704.01.T01:intron 35.0%
! TATTTGAAACCCTATTCGGT+AGG - Chr3:3851179-3851198 None:intergenic 35.0%
! TCAACCTTTTCAATGGAAAG+GGG + Chr3:3843328-3843347 MsG0380011704.01.T01:intron 35.0%
! TGGTTTTTCCGATCTAATAG+TGG - Chr3:3843240-3843259 None:intergenic 35.0%
! TGTTCTCTTTTCCTTTGCTA+AGG - Chr3:3850002-3850021 None:intergenic 35.0%
! TTCAACTTGTTCGTAAGAAG+CGG - Chr3:3842914-3842933 None:intergenic 35.0%
! TTCTTTTACCTTTACTCAGG+TGG + Chr3:3841624-3841643 MsG0380011704.01.T01:intron 35.0%
! TTGCCGATTGTAGAAAATAG+TGG - Chr3:3851523-3851542 None:intergenic 35.0%
!! AAATAACACTCTCTAAAGCC+TGG - Chr3:3847207-3847226 None:intergenic 35.0%
!! AATTTTTAGGCTTTCCAGGT+CGG - Chr3:3841395-3841414 None:intergenic 35.0%
!! ACCATGCTTGCTATTACATA+AGG + Chr3:3850919-3850938 MsG0380011704.01.T01:intron 35.0%
!! ATATAAAGGTGTTGCGCTTA+TGG + Chr3:3840402-3840421 MsG0380011704.01.T01:intron 35.0%
!! CAAGTCATTCCATTTGGTTT+TGG - Chr3:3849436-3849455 None:intergenic 35.0%
!! CACAAAGTGTTGTCAAATAG+TGG + Chr3:3851452-3851471 MsG0380011704.01.T01:intron 35.0%
!! CATCGATTCTTTACTTGCAT+TGG - Chr3:3845387-3845406 None:intergenic 35.0%
!! CTTTTAATTGAAGGCGTGTT+TGG - Chr3:3838871-3838890 None:intergenic 35.0%
!! GATTAGCTTGTAAGCTTATG+AGG + Chr3:3848328-3848347 MsG0380011704.01.T01:intron 35.0%
!! GGAAGAAGATTTTGTTTGTG+TGG + Chr3:3847893-3847912 MsG0380011704.01.T01:intron 35.0%
!! GTAGTTTTGCTTTTCTGTCT+TGG - Chr3:3843275-3843294 None:intergenic 35.0%
!! GTTTGGTGTACTGTTATCAA+TGG - Chr3:3838854-3838873 None:intergenic 35.0%
!! GTTTTTCTCTAAGAGGATTG+TGG - Chr3:3846515-3846534 None:intergenic 35.0%
!! TCTCATGTTTTAAGCACCTT+AGG - Chr3:3840952-3840971 None:intergenic 35.0%
!! TCTGTCTTTCTTTGAAGCAT+AGG + Chr3:3847932-3847951 MsG0380011704.01.T01:intron 35.0%
!! TGTTATCAATGGCGGATTAT+GGG - Chr3:3838843-3838862 None:intergenic 35.0%
!!! GACATTTTATTAGAGGTGCT+CGG + Chr3:3850715-3850734 MsG0380011704.01.T01:CDS 35.0%
!!! GTTGTGCCATTAGGTTTTTT+TGG - Chr3:3844357-3844376 None:intergenic 35.0%
!!! TATTTTAAGGCTACACTCTC+AGG + Chr3:3852046-3852065 MsG0380011704.01.T01:three_prime_UTR 35.0%
!!! TGCATTGGTTTTTCTCTAAG+AGG - Chr3:3846522-3846541 None:intergenic 35.0%
AAAGCGGACAATACCTTGAA+AGG + Chr3:3838491-3838510 MsG0380011704.01.T01:intron 40.0%
AAAGTAGTGTGTCGGATTTG+TGG + Chr3:3838042-3838061 MsG0380011704.01.T01:intron 40.0%
AAATATCCTGCCTACCGAAT+AGG + Chr3:3851166-3851185 MsG0380011704.01.T01:intron 40.0%
AACAATATGCTAGTTGAGCC+AGG + Chr3:3847186-3847205 MsG0380011704.01.T01:intron 40.0%
AACATTGTAGGTCTTAGAGG+CGG + Chr3:3840799-3840818 MsG0380011704.01.T01:intron 40.0%
AAGACCTACAATGTTGTGCA+AGG - Chr3:3840794-3840813 None:intergenic 40.0%
AAGAGAACTAACATGTACCG+TGG - Chr3:3844260-3844279 None:intergenic 40.0%
AAGATAGGCAAAAGGGACAA+AGG + Chr3:3849023-3849042 MsG0380011704.01.T01:intron 40.0%
AAGTGTAAACTCTTCTGTCC+AGG + Chr3:3849818-3849837 MsG0380011704.01.T01:intron 40.0%
AATACTATCTGAACCCACTC+TGG - Chr3:3852252-3852271 None:intergenic 40.0%
AATATCCTGCCTACCGAATA+GGG + Chr3:3851167-3851186 MsG0380011704.01.T01:intron 40.0%
AATTGAACCCACAACCTTGT+GGG - Chr3:3838212-3838231 None:intergenic 40.0%
ACAAAAGATCGAATTGCGAG+CGG + Chr3:3849660-3849679 MsG0380011704.01.T01:intron 40.0%
ACAGCAGTTAATCACACTGT+GGG + Chr3:3841250-3841269 MsG0380011704.01.T01:intron 40.0%
ACATCTTCTGTTGTCTAAGG+TGG + Chr3:3851051-3851070 MsG0380011704.01.T01:intron 40.0%
ACATGAGATACGATGTGTCA+AGG + Chr3:3840964-3840983 MsG0380011704.01.T01:intron 40.0%
ACGGAGCTAGAATTTAGTTG+AGG - Chr3:3847100-3847119 None:intergenic 40.0%
ACGGCTAATAGTAAGGTAGT+TGG - Chr3:3842023-3842042 None:intergenic 40.0%
AGACAGAGAACTCCTCAAAA+CGG - Chr3:3848905-3848924 None:intergenic 40.0%
AGACATATTAGCCACATGCA+AGG + Chr3:3844027-3844046 MsG0380011704.01.T01:intron 40.0%
AGCTCAACGAGTAATAACAG+AGG - Chr3:3838284-3838303 None:intergenic 40.0%
AGCTCATAACACTAGAGAGA+AGG - Chr3:3842108-3842127 None:intergenic 40.0%
AGTTGAGACGAAGAGAGTAA+AGG - Chr3:3838106-3838125 None:intergenic 40.0%
ATATTAGCCACATGCAAGGA+TGG + Chr3:3844031-3844050 MsG0380011704.01.T01:intron 40.0%
ATCGATGCATGGGAAAACTT+AGG + Chr3:3852074-3852093 MsG0380011704.01.T01:three_prime_UTR 40.0%
ATCGGGATCCTAGATATGAT+CGG + Chr3:3840995-3841014 MsG0380011704.01.T01:intron 40.0%
ATGATGACTGGAGCTGATTA+AGG + Chr3:3839893-3839912 MsG0380011704.01.T01:intron 40.0%
ATGCTACCTAAAAGGCTTCA+AGG - Chr3:3850992-3851011 None:intergenic 40.0%
ATGTCGGTATCTTGTCATGT+TGG - Chr3:3842471-3842490 None:intergenic 40.0%
ATTATTTGCTTCGCATCCTC+TGG + Chr3:3844658-3844677 MsG0380011704.01.T01:intron 40.0%
ATTGATACACACAGACTTGG+TGG - Chr3:3850446-3850465 None:intergenic 40.0%
CACAACATTGTAGGTCTTAG+AGG + Chr3:3840796-3840815 MsG0380011704.01.T01:intron 40.0%
CACACCAACAGATTTCAATG+AGG - Chr3:3847696-3847715 None:intergenic 40.0%
CAGAATGCGTAGAAACGTAA+CGG + Chr3:3841416-3841435 MsG0380011704.01.T01:intron 40.0%
CAGACTTATCTCATCCAATG+TGG - Chr3:3849310-3849329 None:intergenic 40.0%
CAGGTCATTAATACCGAATC+TGG - Chr3:3844540-3844559 None:intergenic 40.0%
CATCATCACATCACTCTTTG+TGG + Chr3:3846010-3846029 MsG0380011704.01.T01:intron 40.0%
CCAAACAGTGTTATCAATCG+CGG + Chr3:3840311-3840330 MsG0380011704.01.T01:intron 40.0%
CCACTGTCACGTTAAAATGA+AGG - Chr3:3844496-3844515 None:intergenic 40.0%
CCAGGATTTCGTAGAGTAAA+AGG + Chr3:3849923-3849942 MsG0380011704.01.T01:intron 40.0%
CCATGTCAATTATACTCTCC+AGG + Chr3:3839165-3839184 MsG0380011704.01.T01:CDS 40.0%
CCCATCTTCATCCATTGAAA+AGG - Chr3:3843397-3843416 None:intergenic 40.0%
CCCCATTTAAACTCTAGACT+AGG + Chr3:3842302-3842321 MsG0380011704.01.T01:intron 40.0%
CCTACTGCTTCTGTATTATC+AGG + Chr3:3848760-3848779 MsG0380011704.01.T01:intron 40.0%
CCTGATAATACAGAAGCAGT+AGG - Chr3:3848763-3848782 None:intergenic 40.0%
CTAAATAGACTTGTGGAGAG+AGG - Chr3:3849358-3849377 None:intergenic 40.0%
CTAACCTGAGAATGTGTGAT+TGG - Chr3:3837523-3837542 None:intergenic 40.0%
CTCACATTCTTTGATTGCTC+AGG + Chr3:3848620-3848639 MsG0380011704.01.T01:intron 40.0%
CTGTGGTGTTCACCATTATT+AGG - Chr3:3851958-3851977 None:intergenic 40.0%
CTTAACATAGACACCAAACG+AGG - Chr3:3840177-3840196 None:intergenic 40.0%
CTTCTACAAAGGACAAAACC+GGG - Chr3:3837890-3837909 None:intergenic 40.0%
CTTCTCTACGAAAGGGTTTA+AGG - Chr3:3837419-3837438 None:intergenic 40.0%
CTTTCCTCTTCTCTACGAAA+GGG - Chr3:3837426-3837445 None:intergenic 40.0%
CTTTGATAGAAGCAGAAAGC+AGG + Chr3:3839688-3839707 MsG0380011704.01.T01:intron 40.0%
GAAGAATGTGAATTGCAACG+TGG + Chr3:3845165-3845184 MsG0380011704.01.T01:intron 40.0%
GACTGTTGCACATTAGAAAG+AGG - Chr3:3839750-3839769 None:intergenic 40.0%
GAGAATTAGGCAGAAACTTG+AGG + Chr3:3839099-3839118 MsG0380011704.01.T01:CDS 40.0%
GATGAGTGACATTGCTTCTT+CGG + Chr3:3851783-3851802 MsG0380011704.01.T01:three_prime_UTR 40.0%
GATTCTTGTCTTGAAGCGAT+TGG - Chr3:3847054-3847073 None:intergenic 40.0%
GCATAAAAAAGCCATGGAAG+TGG - Chr3:3842248-3842267 None:intergenic 40.0%
GCTTACAAGCTAATCCAAGA+AGG - Chr3:3848323-3848342 None:intergenic 40.0%
GCTTCAAGAGTAGAATTGAC+AGG + Chr3:3851732-3851751 MsG0380011704.01.T01:exon 40.0%
GGATTCCCCACTTTGTAATA+TGG + Chr3:3849160-3849179 MsG0380011704.01.T01:intron 40.0%
GGATTTCGTAGAGTAAAAGG+AGG + Chr3:3849926-3849945 MsG0380011704.01.T01:intron 40.0%
GGTTTGTCAAGACAAGTATG+AGG + Chr3:3842802-3842821 MsG0380011704.01.T01:CDS 40.0%
GTAGTCATAACCACAGATGT+CGG - Chr3:3842487-3842506 None:intergenic 40.0%
GTATGCTAGTTGTTAGACAC+AGG - Chr3:3846408-3846427 None:intergenic 40.0%
GTGATTGGAAGGAAACAAAC+TGG - Chr3:3837508-3837527 None:intergenic 40.0%
GTGGGAAAAAACTTGGTTGT+CGG - Chr3:3840233-3840252 None:intergenic 40.0%
GTTATGAGCTCAAAGAATGC+CGG + Chr3:3842118-3842137 MsG0380011704.01.T01:intron 40.0%
GTTGAGACGAAGAGAGTAAA+GGG - Chr3:3838105-3838124 None:intergenic 40.0%
TAAACCCTTTCGTAGAGAAG+AGG + Chr3:3837419-3837438 MsG0380011704.01.T01:five_prime_UTR 40.0%
TAACACTACTCATTGCTCTC+GGG - Chr3:3849090-3849109 None:intergenic 40.0%
TACAAGCTGTGACTGTATGA+GGG + Chr3:3841138-3841157 MsG0380011704.01.T01:intron 40.0%
TACAGCAGTTAATCACACTG+TGG + Chr3:3841249-3841268 MsG0380011704.01.T01:intron 40.0%
TAGTGTTAAGAGTCTCACGT+TGG + Chr3:3849102-3849121 MsG0380011704.01.T01:intron 40.0%
TATACTCTCCAGGTTCTTTC+TGG + Chr3:3839175-3839194 MsG0380011704.01.T01:intron 40.0%
TATATGGCATGACCTCAAGT+TGG + Chr3:3837833-3837852 MsG0380011704.01.T01:intron 40.0%
TATCACAGAACACAGCGATA+GGG + Chr3:3841481-3841500 MsG0380011704.01.T01:intron 40.0%
TATCTGGAAACAGAACACAG+AGG + Chr3:3849853-3849872 MsG0380011704.01.T01:intron 40.0%
TATGAGTGAGAGAGAGAAAG+AGG - Chr3:3839825-3839844 None:intergenic 40.0%
TATGCAACAAGTGTACATGC+TGG + Chr3:3841728-3841747 MsG0380011704.01.T01:intron 40.0%
TATTAGCCACATGCAAGGAT+GGG + Chr3:3844032-3844051 MsG0380011704.01.T01:intron 40.0%
TCACTATTGTTCCACTTCCA+TGG + Chr3:3842234-3842253 MsG0380011704.01.T01:intron 40.0%
TCATACAGTCACAGCTTGTA+AGG - Chr3:3841138-3841157 None:intergenic 40.0%
TCGAGTTTAGGGATTGTCAA+TGG + Chr3:3845276-3845295 MsG0380011704.01.T01:intron 40.0%
TCTTTCTGCAGGTAATGCAT+TGG - Chr3:3846537-3846556 None:intergenic 40.0%
TGAACAAGGCTAGACATTGT+AGG + Chr3:3846559-3846578 MsG0380011704.01.T01:intron 40.0%
TGATGACTGGAGCTGATTAA+GGG + Chr3:3839894-3839913 MsG0380011704.01.T01:intron 40.0%
TGCAGCATATGTCAGAAACA+TGG + Chr3:3840375-3840394 MsG0380011704.01.T01:intron 40.0%
TGCTAAAAAATGAGGACACC+AGG + Chr3:3850323-3850342 MsG0380011704.01.T01:intron 40.0%
TGGTGTACTGTTATCAATGG+CGG - Chr3:3838851-3838870 None:intergenic 40.0%
TGGTGTTCACCATTATTAGG+AGG - Chr3:3851955-3851974 None:intergenic 40.0%
TGTGTCAAGGTAGTCAGAAT+CGG + Chr3:3840977-3840996 MsG0380011704.01.T01:intron 40.0%
TGTTGTGCAAGGCCAAATAT+TGG - Chr3:3840783-3840802 None:intergenic 40.0%
TTAAGAGACCAGAAAGAACC+TGG - Chr3:3839186-3839205 None:intergenic 40.0%
TTACAAGCTGTGACTGTATG+AGG + Chr3:3841137-3841156 MsG0380011704.01.T01:intron 40.0%
TTATCACAGAACACAGCGAT+AGG + Chr3:3841480-3841499 MsG0380011704.01.T01:intron 40.0%
TTCATTTCCTGCAACTGTGA+TGG + Chr3:3844586-3844605 MsG0380011704.01.T01:intron 40.0%
TTCGAAAGAAAACCGTTTCG+AGG - Chr3:3850241-3850260 None:intergenic 40.0%
TTCGTCTCAACTCTCAACTA+GGG + Chr3:3838114-3838133 MsG0380011704.01.T01:intron 40.0%
TTCTACAAAGGACAAAACCG+GGG - Chr3:3837889-3837908 None:intergenic 40.0%
TTGCGATTCACATTTGTTCG+TGG + Chr3:3844884-3844903 MsG0380011704.01.T01:intron 40.0%
TTGCTGGGAAAATTCTTTGC+AGG + Chr3:3851606-3851625 MsG0380011704.01.T01:intron 40.0%
TTGTCAAATAGTGGCCATAG+CGG + Chr3:3851461-3851480 MsG0380011704.01.T01:intron 40.0%
! ACGCCTTCAATTAAAAGCGT+CGG + Chr3:3838874-3838893 MsG0380011704.01.T01:intron 40.0%
! ACGTGCTGAAGTTTTCTGTT+TGG + Chr3:3850130-3850149 MsG0380011704.01.T01:intron 40.0%
! AGGGACAAAGGCATAATATG+GGG + Chr3:3849035-3849054 MsG0380011704.01.T01:intron 40.0%
! ATGGTTTGTAGGTTCGAGTT+AGG + Chr3:3849179-3849198 MsG0380011704.01.T01:intron 40.0%
! ATTGACATGGTCTTGAACAG+GGG - Chr3:3839155-3839174 None:intergenic 40.0%
! CAACCTTTTCAATGGAAAGG+GGG + Chr3:3843329-3843348 MsG0380011704.01.T01:intron 40.0%
! CCTGGAGAGTATAATTGACA+TGG - Chr3:3839168-3839187 None:intergenic 40.0%
! CCTTTTACTCTACGAAATCC+TGG - Chr3:3849926-3849945 None:intergenic 40.0%
! CGCCATGTTTTATCCAATGT+AGG + Chr3:3838003-3838022 MsG0380011704.01.T01:intron 40.0%
! CGCGATTGATAACACTGTTT+GGG - Chr3:3840313-3840332 None:intergenic 40.0%
! CGTAAATTGATAGCAGACAG+TGG - Chr3:3841453-3841472 None:intergenic 40.0%
! CTTACATTTGGCGTTTTTCC+TGG - Chr3:3850344-3850363 None:intergenic 40.0%
! GACAGATATAATAGGTGCTG+TGG - Chr3:3838776-3838795 None:intergenic 40.0%
! GTGTTATCAATCGCGGATTA+CGG + Chr3:3840318-3840337 MsG0380011704.01.T01:intron 40.0%
! TAAATGGGGACAAGAAGTGT+TGG - Chr3:3842291-3842310 None:intergenic 40.0%
! TAAGTTTTCCCATGCATCGA+TGG - Chr3:3852075-3852094 None:intergenic 40.0%
! TGCATCGGCATTCAAATTAC+AGG - Chr3:3843073-3843092 None:intergenic 40.0%
! TTCTAGGAAGAACTGTTGTC+TGG - Chr3:3842953-3842972 None:intergenic 40.0%
! TTGATAGCAGACAGTGGAAT+CGG - Chr3:3841447-3841466 None:intergenic 40.0%
! TTTTGTGTCTTCTGCGATTG+TGG - Chr3:3843952-3843971 None:intergenic 40.0%
!! ATTGGTGTTAATGACTGGAG+CGG - Chr3:3841287-3841306 None:intergenic 40.0%
!! ATTTTTAGGCTTTCCAGGTC+GGG - Chr3:3841394-3841413 None:intergenic 40.0%
!! CCTTCATTTTAACGTGACAG+TGG + Chr3:3844493-3844512 MsG0380011704.01.T01:intron 40.0%
!! CTGCAATTTTTAGGCTTTCC+AGG - Chr3:3841399-3841418 None:intergenic 40.0%
!! CTGTTATCAATGGCGGATTA+TGG - Chr3:3838844-3838863 None:intergenic 40.0%
!! CTTTCACAAGCCAGTTTTGT+GGG - Chr3:3837948-3837967 None:intergenic 40.0%
!! CTTTCTTTGAAGCATAGGCA+TGG + Chr3:3847937-3847956 MsG0380011704.01.T01:intron 40.0%
!! GTTATCAATGGCGGATTATG+GGG - Chr3:3838842-3838861 None:intergenic 40.0%
!! TTATCAATGGCGGATTATGG+GGG - Chr3:3838841-3838860 None:intergenic 40.0%
!! TTTCACAAGCCAGTTTTGTG+GGG - Chr3:3837947-3837966 None:intergenic 40.0%
!!! ATCAGACTTGCTGGTGATTT+TGG - Chr3:3850182-3850201 None:intergenic 40.0%
!!! TTCAAGGTATTGTCCGCTTT+TGG - Chr3:3838491-3838510 None:intergenic 40.0%
AAACAGTTCGTAGGCCTTCT+TGG + Chr3:3848306-3848325 MsG0380011704.01.T01:intron 45.0%
AACATGCACCCAAGCTAAGA+TGG - Chr3:3837864-3837883 None:intergenic 45.0%
AAGATGGTGTGACCAACTTG+AGG - Chr3:3837848-3837867 None:intergenic 45.0%
AATCCGACACACTACTTTCG+AGG - Chr3:3838040-3838059 None:intergenic 45.0%
ACAATGTTATAGCGCCGCTA+TGG - Chr3:3851478-3851497 None:intergenic 45.0%
ACCTTGAAAGGTGGTGTGAT+GGG + Chr3:3838503-3838522 MsG0380011704.01.T01:intron 45.0%
ACTCTACGAAATCCTGGGAT+CGG - Chr3:3849920-3849939 None:intergenic 45.0%
ACTCTTTAGGTGTGGCGAAA+CGG - Chr3:3838143-3838162 None:intergenic 45.0%
AGCAATGTCACTCATCCATC+CGG - Chr3:3851779-3851798 None:intergenic 45.0%
ATACGGGTAGAGGTGAGAAT+TGG + Chr3:3845315-3845334 MsG0380011704.01.T01:intron 45.0%
ATCCTAGATATGATCGGGGA+AGG + Chr3:3841001-3841020 MsG0380011704.01.T01:intron 45.0%
ATGTGAATTGCAACGTGGGT+CGG + Chr3:3845170-3845189 MsG0380011704.01.T01:intron 45.0%
ATTAGCCACATGCAAGGATG+GGG + Chr3:3844033-3844052 MsG0380011704.01.T01:intron 45.0%
ATTGAGTTCTTACCTGCGAC+TGG + Chr3:3844946-3844965 MsG0380011704.01.T01:intron 45.0%
ATTGCACAACCCCACAAAAC+TGG + Chr3:3837935-3837954 MsG0380011704.01.T01:intron 45.0%
CAAAGTGACAGGGAGATAGA+AGG - Chr3:3840920-3840939 None:intergenic 45.0%
CAAGACTTCCACCTGAGTAA+AGG - Chr3:3841635-3841654 None:intergenic 45.0%
CAGGGAAACTAATCCTCACA+TGG + Chr3:3848639-3848658 MsG0380011704.01.T01:intron 45.0%
CATCTAAGTGAAAACCACGG+TGG + Chr3:3851872-3851891 MsG0380011704.01.T01:three_prime_UTR 45.0%
CCACACTCCACCAAATTCAT+TGG - Chr3:3841305-3841324 None:intergenic 45.0%
CCACCATACAAATGAAGCCA+TGG + Chr3:3842179-3842198 MsG0380011704.01.T01:intron 45.0%
CCATGGCTTCATTTGTATGG+TGG - Chr3:3842182-3842201 None:intergenic 45.0%
CCTGAGAATGTGTGATTGGA+AGG - Chr3:3837519-3837538 None:intergenic 45.0%
CCTGCAGAAAGAGTTGAACA+AGG + Chr3:3846545-3846564 MsG0380011704.01.T01:intron 45.0%
CCTTCCAATCACACATTCTC+AGG + Chr3:3837516-3837535 MsG0380011704.01.T01:five_prime_UTR 45.0%
CCTTGTTCAACTCTTTCTGC+AGG - Chr3:3846548-3846567 None:intergenic 45.0%
CCTTTCCTCTTCTCTACGAA+AGG - Chr3:3837427-3837446 None:intergenic 45.0%
CCTTTCGTAGAGAAGAGGAA+AGG + Chr3:3837424-3837443 MsG0380011704.01.T01:five_prime_UTR 45.0%
CGTGCATGTGAGTACTTCAT+TGG - Chr3:3838575-3838594 None:intergenic 45.0%
CTACCTAAAAGGCTTCAAGG+TGG - Chr3:3850989-3851008 None:intergenic 45.0%
CTTATGTTGCCAAGGAAGGT+TGG + Chr3:3838163-3838182 MsG0380011704.01.T01:intron 45.0%
CTTCGTCTCAACTCTCAACT+AGG + Chr3:3838113-3838132 MsG0380011704.01.T01:intron 45.0%
GAATGGCACAGAATCTGTCA+TGG - Chr3:3838745-3838764 None:intergenic 45.0%
GAATTGAACCCACAACCTTG+TGG - Chr3:3838213-3838232 None:intergenic 45.0%
GACAGAGAACTCCTCAAAAC+GGG - Chr3:3848904-3848923 None:intergenic 45.0%
GATTCTTTCTCTCGGTCGTT+TGG - Chr3:3843926-3843945 None:intergenic 45.0%
GCAGTGCCATATTTATGTGG+CGG - Chr3:3840358-3840377 None:intergenic 45.0%
GCTGCAGTGCCATATTTATG+TGG - Chr3:3840361-3840380 None:intergenic 45.0%
GGAAGGAAACAAACTGGGTT+TGG - Chr3:3837502-3837521 None:intergenic 45.0%
GGACATCACTCTACAAACTC+TGG + Chr3:3852095-3852114 MsG0380011704.01.T01:three_prime_UTR 45.0%
GGAGAAGTTAAACGGGACTA+CGG + Chr3:3848419-3848438 MsG0380011704.01.T01:intron 45.0%
GGCGTTAAAGAGTCCTACAT+TGG - Chr3:3838019-3838038 None:intergenic 45.0%
GGTCATCTCTTATCCGATGT+AGG - Chr3:3841081-3841100 None:intergenic 45.0%
GTAATGCGCTTCAGAGTTTC+CGG - Chr3:3842140-3842159 None:intergenic 45.0%
GTCATGTTGGTATCCGATAC+TGG - Chr3:3842458-3842477 None:intergenic 45.0%
GTCTCACGTTGGATGAGATA+AGG + Chr3:3849113-3849132 MsG0380011704.01.T01:intron 45.0%
GTCTTGCGTCTAATATGTGC+TGG - Chr3:3838703-3838722 None:intergenic 45.0%
GTGAGTTTCGTGTGTGTTGA+CGG - Chr3:3847119-3847138 None:intergenic 45.0%
GTGTCAAGGTAGTCAGAATC+GGG + Chr3:3840978-3840997 MsG0380011704.01.T01:intron 45.0%
GTGTCGGATTTGTGGAACAT+TGG + Chr3:3838050-3838069 MsG0380011704.01.T01:intron 45.0%
TAAGACACAGACACAGAGAC+CGG - Chr3:3842528-3842547 None:intergenic 45.0%
TACCTTGAAAGGTGGTGTGA+TGG + Chr3:3838502-3838521 MsG0380011704.01.T01:intron 45.0%
TCAAAGCTCCAACAGAAACC+TGG + Chr3:3842827-3842846 MsG0380011704.01.T01:CDS 45.0%
TCACATGCATATGCCATGTG+AGG - Chr3:3848655-3848674 None:intergenic 45.0%
TCACCCCCTTTCCATTGAAA+AGG - Chr3:3843335-3843354 None:intergenic 45.0%
TCAGGATTCCATCGATGCAT+GGG + Chr3:3852064-3852083 MsG0380011704.01.T01:three_prime_UTR 45.0%
TCATAGCTCCAGGTTTCTGT+TGG - Chr3:3842838-3842857 None:intergenic 45.0%
TCCTAGATATGATCGGGGAA+GGG + Chr3:3841002-3841021 MsG0380011704.01.T01:intron 45.0%
TCGGGATCCTAGATATGATC+GGG + Chr3:3840996-3841015 MsG0380011704.01.T01:intron 45.0%
TCTTTGTGGGCGATATGCTA+TGG + Chr3:3846024-3846043 MsG0380011704.01.T01:intron 45.0%
TGAAGGACTTGCACCAAAAG+CGG + Chr3:3838475-3838494 MsG0380011704.01.T01:intron 45.0%
TGACAAGATACCGACATCTG+TGG + Chr3:3842474-3842493 MsG0380011704.01.T01:intron 45.0%
TGAGAAGCAAATACGGGTAG+AGG + Chr3:3845305-3845324 MsG0380011704.01.T01:intron 45.0%
TGATTACCAGGAATGTGGAG+TGG - Chr3:3844762-3844781 None:intergenic 45.0%
TGCATTGTGGCGTTATAGCA+TGG - Chr3:3840446-3840465 None:intergenic 45.0%
TGCGCGTGAAGACAAAAACA+CGG - Chr3:3840598-3840617 None:intergenic 45.0%
TGGTCACACCATCTTAGCTT+GGG + Chr3:3837853-3837872 MsG0380011704.01.T01:intron 45.0%
TTGGTCACACCATCTTAGCT+TGG + Chr3:3837852-3837871 MsG0380011704.01.T01:intron 45.0%
TTTCTGCTATGGCTGCATTG+TGG - Chr3:3840459-3840478 None:intergenic 45.0%
! AAAGACGTCTCATTGGGTTG+AGG - Chr3:3838438-3838457 None:intergenic 45.0%
! AATTGCAAAGTACCAGTCGC+AGG - Chr3:3844961-3844980 None:intergenic 45.0%
! ACTGTTGTCTGGAATGCCAA+AGG - Chr3:3842942-3842961 None:intergenic 45.0%
! ATAATAGGTGCTGTGGCCTA+TGG - Chr3:3838769-3838788 None:intergenic 45.0%
! ATGAATTTGGTGGAGTGTGG+TGG + Chr3:3841305-3841324 MsG0380011704.01.T01:intron 45.0%
! CCAATGAATTTGGTGGAGTG+TGG + Chr3:3841302-3841321 MsG0380011704.01.T01:intron 45.0%
! CCGCGATTGATAACACTGTT+TGG - Chr3:3840314-3840333 None:intergenic 45.0%
! CCTTTCACAAGCCAGTTTTG+TGG - Chr3:3837949-3837968 None:intergenic 45.0%
! GAAGGTTGGCTCAATTGGTA+AGG + Chr3:3838177-3838196 MsG0380011704.01.T01:intron 45.0%
! GAGTCTTATGTTGCCAAGGA+AGG + Chr3:3838159-3838178 MsG0380011704.01.T01:intron 45.0%
! TAAGGATTGACTCACCCACA+AGG + Chr3:3838195-3838214 MsG0380011704.01.T01:intron 45.0%
! TAGCCACCTTGAAGCCTTTT+AGG + Chr3:3850983-3851002 MsG0380011704.01.T01:intron 45.0%
! TGAATTTGGTGGAGTGTGGT+GGG + Chr3:3841306-3841325 MsG0380011704.01.T01:intron 45.0%
! TGGTGGGTGGTTACACAAAA+TGG - Chr3:3843906-3843925 None:intergenic 45.0%
! TGTCAACTGACTCCTCGAAA+CGG + Chr3:3850226-3850245 MsG0380011704.01.T01:intron 45.0%
! TTATCAATCGCGGATTACGG+TGG + Chr3:3840321-3840340 MsG0380011704.01.T01:intron 45.0%
! TTTGAGGTCTGACATGACCT+TGG + Chr3:3838303-3838322 MsG0380011704.01.T01:intron 45.0%
! TTTTACCCCATCCTTGCATG+TGG - Chr3:3844041-3844060 None:intergenic 45.0%
!! ACAAGAAGTGTTGGCAGTCA+TGG - Chr3:3842282-3842301 None:intergenic 45.0%
!! CCACAAAACTGGCTTGTGAA+AGG + Chr3:3837946-3837965 MsG0380011704.01.T01:intron 45.0%
!! CTTTTGGTGCAAGTCCTTCA+TGG - Chr3:3838475-3838494 None:intergenic 45.0%
!! GCACCGACGCTTTTAATTGA+AGG - Chr3:3838880-3838899 None:intergenic 45.0%
!! GGGTCGTTTTAACAGAAACC+AGG + Chr3:3841360-3841379 MsG0380011704.01.T01:intron 45.0%
!! TCTCATTGGGTTGAGGAAAG+CGG - Chr3:3838431-3838450 None:intergenic 45.0%
!! TTGGCCTTGCACAACATTGT+AGG + Chr3:3840787-3840806 MsG0380011704.01.T01:intron 45.0%
!! TTTATGTGGCGGATGTTAGC+TGG - Chr3:3840347-3840366 None:intergenic 45.0%
!!! GGTGGGTTATGAACCCTTTT+TGG + Chr3:3841323-3841342 MsG0380011704.01.T01:intron 45.0%
!!! ATGTAAAATATTTTTATTTT+TGG + Chr3:3843810-3843829 MsG0380011704.01.T01:intron 5.0%
!!! ATTAATTAATTAATTTTTAC+GGG + Chr3:3847234-3847253 MsG0380011704.01.T01:intron 5.0%
!!! TATATACTTATATATTTTAT+AGG + Chr3:3838916-3838935 MsG0380011704.01.T01:intron 5.0%
AAAACCACGGTGGCATTTCG+TGG + Chr3:3851882-3851901 MsG0380011704.01.T01:three_prime_UTR 50.0%
ACCCTTCCCCGATCATATCT+AGG - Chr3:3841006-3841025 None:intergenic 50.0%
ACGCCTCGAAAGTAGTGTGT+CGG + Chr3:3838034-3838053 MsG0380011704.01.T01:intron 50.0%
AGAAGCCATGATCCGTACGT+GGG + Chr3:3846486-3846505 MsG0380011704.01.T01:intron 50.0%
AGAGCCCATTGAAGATCCAC+GGG + Chr3:3849225-3849244 MsG0380011704.01.T01:intron 50.0%
AGCTGTGACTGTATGAGGGA+AGG + Chr3:3841142-3841161 MsG0380011704.01.T01:intron 50.0%
ATAACCACGAAATGCCACCG+TGG - Chr3:3851889-3851908 None:intergenic 50.0%
ATCCATCAAAGAGGTCGCAC+TGG - Chr3:3838241-3838260 None:intergenic 50.0%
ATGTCCAATCCTAGGCGTGA+GGG + Chr3:3849268-3849287 MsG0380011704.01.T01:intron 50.0%
CAGAGCCCATTGAAGATCCA+CGG + Chr3:3849224-3849243 MsG0380011704.01.T01:intron 50.0%
CAGATACCTCGATGCTTACC+TGG - Chr3:3849839-3849858 None:intergenic 50.0%
CCAATTGAGCCAACCTTCCT+TGG - Chr3:3838175-3838194 None:intergenic 50.0%
CGGGATCCTAGATATGATCG+GGG + Chr3:3840997-3841016 MsG0380011704.01.T01:intron 50.0%
CGTGGTCGCAATTGAGTTCT+TGG + Chr3:3844902-3844921 MsG0380011704.01.T01:intron 50.0%
CTCAACTGTGGCTGAGTATG+TGG + Chr3:3850779-3850798 MsG0380011704.01.T01:CDS 50.0%
CTCAGGATTCCATCGATGCA+TGG + Chr3:3852063-3852082 MsG0380011704.01.T01:three_prime_UTR 50.0%
CTTTCTCTCGGTCGTTTGGT+GGG - Chr3:3843922-3843941 None:intergenic 50.0%
GAGCGACTACATAGGACTAG+AGG + Chr3:3845465-3845484 MsG0380011704.01.T01:intron 50.0%
GCCTAGATTCCCAAGGAATG+GGG - Chr3:3838387-3838406 None:intergenic 50.0%
GCGGACAATACCTTGAAAGG+TGG + Chr3:3838494-3838513 MsG0380011704.01.T01:intron 50.0%
GGCCTAGATTCCCAAGGAAT+GGG - Chr3:3838388-3838407 None:intergenic 50.0%
GGTCGCAATTGAGTTCTTGG+TGG + Chr3:3844905-3844924 MsG0380011704.01.T01:intron 50.0%
GGTCGTCTAAGCCACTATGA+TGG + Chr3:3838071-3838090 MsG0380011704.01.T01:intron 50.0%
GTGTGTTACGAGTCCCACAT+TGG + Chr3:3849293-3849312 MsG0380011704.01.T01:intron 50.0%
TACATGCTGGCGTCATCTCT+TGG + Chr3:3841741-3841760 MsG0380011704.01.T01:intron 50.0%
TCCATCAAAGAGGTCGCACT+GGG - Chr3:3838240-3838259 None:intergenic 50.0%
TCCCCATTCCTTGGGAATCT+AGG + Chr3:3838383-3838402 MsG0380011704.01.T01:intron 50.0%
TCCTTGGGAATCTAGGCCAA+GGG + Chr3:3838390-3838409 MsG0380011704.01.T01:intron 50.0%
TCTTGAAGCGATTGGCGTTG+TGG - Chr3:3847046-3847065 None:intergenic 50.0%
TCTTTCTCTCGGTCGTTTGG+TGG - Chr3:3843923-3843942 None:intergenic 50.0%
TGAAACCCTATTCGGTAGGC+AGG - Chr3:3851175-3851194 None:intergenic 50.0%
TGACTCACCCACAAGGTTGT+GGG + Chr3:3838202-3838221 MsG0380011704.01.T01:intron 50.0%
TGCTCCAGATGTCCAATCCT+AGG + Chr3:3849260-3849279 MsG0380011704.01.T01:intron 50.0%
TGCTTCTTCGGTCTGAACCA+AGG + Chr3:3851795-3851814 MsG0380011704.01.T01:three_prime_UTR 50.0%
TGGCACAGAATCTGTCATGG+CGG - Chr3:3838742-3838761 None:intergenic 50.0%
TGGCCTAGATTCCCAAGGAA+TGG - Chr3:3838389-3838408 None:intergenic 50.0%
TGGCTATCCATCACAGTTGC+AGG - Chr3:3844596-3844615 None:intergenic 50.0%
TGTGAATTGCAACGTGGGTC+GGG + Chr3:3845171-3845190 MsG0380011704.01.T01:intron 50.0%
TGTGGCTGAGTATGTGGAGA+AGG + Chr3:3850785-3850804 MsG0380011704.01.T01:CDS 50.0%
TTCCTTGGGAATCTAGGCCA+AGG + Chr3:3838389-3838408 MsG0380011704.01.T01:intron 50.0%
TTGAATCGCTTCGTCAGCAC+AGG - Chr3:3842873-3842892 None:intergenic 50.0%
TTGACTCACCCACAAGGTTG+TGG + Chr3:3838201-3838220 MsG0380011704.01.T01:intron 50.0%
TTGTGGGCGATATGCTATGG+AGG + Chr3:3846027-3846046 MsG0380011704.01.T01:intron 50.0%
! CCAAGGAAGGTTGGCTCAAT+TGG + Chr3:3838172-3838191 MsG0380011704.01.T01:intron 50.0%
! GATTCTGTGCCATTCGCCAT+AGG + Chr3:3838750-3838769 MsG0380011704.01.T01:intron 50.0%
! GTGGAAGTCTTGTGTTTCCG+TGG + Chr3:3841643-3841662 MsG0380011704.01.T01:intron 50.0%
! TTCTGTCCAGGTAAGCATCG+AGG + Chr3:3849830-3849849 MsG0380011704.01.T01:intron 50.0%
! TTTAGGTGAGTTGGGCTCCA+AGG - Chr3:3838333-3838352 None:intergenic 50.0%
!! ACACACAGACTTGGTGGTCA+AGG - Chr3:3850440-3850459 None:intergenic 50.0%
!! CAGGTAAGCATCGAGGTATC+TGG + Chr3:3849837-3849856 MsG0380011704.01.T01:intron 50.0%
AAAGCTGCACAACCGATCCC+AGG + Chr3:3849905-3849924 MsG0380011704.01.T01:intron 55.0%
ACCCTTGGCCTAGATTCCCA+AGG - Chr3:3838394-3838413 None:intergenic 55.0%
AGCAGCCCGTGGATCTTCAA+TGG - Chr3:3849233-3849252 None:intergenic 55.0%
ATTGCTCTCGGGCTCAGCTA+AGG - Chr3:3849079-3849098 None:intergenic 55.0%
CACGCCTAGGATTGGACATC+TGG - Chr3:3849267-3849286 None:intergenic 55.0%
CAGAAGCCATGATCCGTACG+TGG + Chr3:3846485-3846504 MsG0380011704.01.T01:intron 55.0%
CCATCAAAGAGGTCGCACTG+GGG - Chr3:3838239-3838258 None:intergenic 55.0%
GACATGACCTTGGTGAGCCT+TGG + Chr3:3838313-3838332 MsG0380011704.01.T01:intron 55.0%
GATGTCCAATCCTAGGCGTG+AGG + Chr3:3849267-3849286 MsG0380011704.01.T01:intron 55.0%
GCAGCAGCTGAAGCGCAATT+AGG + Chr3:3839070-3839089 MsG0380011704.01.T01:CDS 55.0%
GCAGCCCGTGGATCTTCAAT+GGG - Chr3:3849232-3849251 None:intergenic 55.0%
GCCCATCACACCACCTTTCA+AGG - Chr3:3838507-3838526 None:intergenic 55.0%
GCTGTAGCGCTGTAGTACAG+TGG + Chr3:3851400-3851419 MsG0380011704.01.T01:intron 55.0%
GGGTCTGTCAGCCATCATAG+TGG - Chr3:3838085-3838104 None:intergenic 55.0%
GTAACATGACCTGAGGGCTG+AGG + Chr3:3848046-3848065 MsG0380011704.01.T01:intron 55.0%
TGCAGTCCACTCCACATTCC+TGG + Chr3:3844753-3844772 MsG0380011704.01.T01:intron 55.0%
TGTCCAATCCTAGGCGTGAG+GGG + Chr3:3849269-3849288 MsG0380011704.01.T01:intron 55.0%
! TGTCTTGGTGCAGCTCAGTC+TGG - Chr3:3843260-3843279 None:intergenic 55.0%
! TTGAAGATCCACGGGCTGCT+TGG + Chr3:3849233-3849252 MsG0380011704.01.T01:intron 55.0%
!! AAGGTGGTGTGATGGGCTTG+AGG + Chr3:3838510-3838529 MsG0380011704.01.T01:intron 55.0%
!! GGAATGTGGAGTGGACTGCA+TGG - Chr3:3844753-3844772 None:intergenic 55.0%
!! TGGTGTGATGGGCTTGAGGT+CGG + Chr3:3838514-3838533 MsG0380011704.01.T01:intron 55.0%
AACACACACCCCTCACGCCT+AGG - Chr3:3849280-3849299 None:intergenic 60.0%
ACACCCCTCACGCCTAGGAT+TGG - Chr3:3849275-3849294 None:intergenic 60.0%
AGCATGATCCAAGCAGCCCG+TGG - Chr3:3849244-3849263 None:intergenic 60.0%
CAAAGAGGTCGCACTGGGGA+GGG - Chr3:3838235-3838254 None:intergenic 60.0%
CCCCAGTGCGACCTCTTTGA+TGG + Chr3:3838236-3838255 MsG0380011704.01.T01:intron 60.0%
GCTTGGGTGCATGTTCTCCC+CGG + Chr3:3837869-3837888 MsG0380011704.01.T01:intron 60.0%
GGATTGTGGCGTCCCACGTA+CGG - Chr3:3846501-3846520 None:intergenic 60.0%
GTGCTGTGGCCTATGGCGAA+TGG - Chr3:3838762-3838781 None:intergenic 60.0%
TCAAAGAGGTCGCACTGGGG+AGG - Chr3:3838236-3838255 None:intergenic 60.0%
TTGGGCTCCAAGGCTCACCA+AGG - Chr3:3838323-3838342 None:intergenic 60.0%
! TCTCTCGGTCGTTTGGTGGG+TGG - Chr3:3843919-3843938 None:intergenic 60.0%
CACGTTCAGCCTCAGCCCTC+AGG - Chr3:3848058-3848077 None:intergenic 65.0%
CCAGGACGTGTAACCCGACC+TGG + Chr3:3841378-3841397 MsG0380011704.01.T01:intron 65.0%
CCAGGTCGGGTTACACGTCC+TGG - Chr3:3841381-3841400 None:intergenic 65.0%
GGCGTCCCACGTACGGATCA+TGG - Chr3:3846494-3846513 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 3837385 3852352 3837385 ID=MsG0380011704.01;Name=MsG0380011704.01
Chr3 mRNA 3837385 3852352 3837385 ID=MsG0380011704.01.T01;Parent=MsG0380011704.01;Name=MsG0380011704.01.T01;_AED=0.45;_eAED=0.45;_QI=165|0.5|0.71|1|0.66|0.42|7|541|212
Chr3 exon 3837385 3837537 3837385 ID=MsG0380011704.01.T01:exon:1938;Parent=MsG0380011704.01.T01
Chr3 exon 3839046 3839186 3839046 ID=MsG0380011704.01.T01:exon:1939;Parent=MsG0380011704.01.T01
Chr3 exon 3842779 3842959 3842779 ID=MsG0380011704.01.T01:exon:1940;Parent=MsG0380011704.01.T01
Chr3 exon 3848883 3848993 3848883 ID=MsG0380011704.01.T01:exon:1941;Parent=MsG0380011704.01.T01
Chr3 exon 3850706 3850806 3850706 ID=MsG0380011704.01.T01:exon:1942;Parent=MsG0380011704.01.T01
Chr3 exon 3851628 3852253 3851628 ID=MsG0380011704.01.T01:exon:1943;Parent=MsG0380011704.01.T01
Chr3 exon 3852321 3852352 3852321 ID=MsG0380011704.01.T01:exon:1944;Parent=MsG0380011704.01.T01
Chr3 five_prime_UTR 3837385 3837537 3837385 ID=MsG0380011704.01.T01:five_prime_utr;Parent=MsG0380011704.01.T01
Chr3 five_prime_UTR 3839046 3839057 3839046 ID=MsG0380011704.01.T01:five_prime_utr;Parent=MsG0380011704.01.T01
Chr3 CDS 3839058 3839186 3839058 ID=MsG0380011704.01.T01:cds;Parent=MsG0380011704.01.T01
Chr3 CDS 3842779 3842959 3842779 ID=MsG0380011704.01.T01:cds;Parent=MsG0380011704.01.T01
Chr3 CDS 3848883 3848993 3848883 ID=MsG0380011704.01.T01:cds;Parent=MsG0380011704.01.T01
Chr3 CDS 3850706 3850806 3850706 ID=MsG0380011704.01.T01:cds;Parent=MsG0380011704.01.T01
Chr3 CDS 3851628 3851744 3851628 ID=MsG0380011704.01.T01:cds;Parent=MsG0380011704.01.T01
Chr3 three_prime_UTR 3851745 3852253 3851745 ID=MsG0380011704.01.T01:three_prime_utr;Parent=MsG0380011704.01.T01
Chr3 three_prime_UTR 3852321 3852352 3852321 ID=MsG0380011704.01.T01:three_prime_utr;Parent=MsG0380011704.01.T01
Gene Sequence

>MsG0380011704.01.T01

ATGGATCACTTAGCAGCAGCTGAAGCGCAATTAGGTCAACAGAGAATTAGGCAGAAACTTGAGGAAGTGAATGTAGCTGCTCAAACTAATCTTGCCCCTGTTCAAGACCATGTCAATTATACTCTCCAGGAGAAGTTGAATAGATCTATGATGGTTTGTCAAGACAAGTATGAGGGATCAAAGCTCCAACAGAAACCTGGAGCTATGAATGATATGATTTCCTGTGCTGACGAAGCGATTCAAGACAGCATTAAAATGCTGCCGCTTCTTACGAACAAGTTGAAAGCTTCCTTTGGCATTCCAGACAACAATACCGAAATTTCTTCTACCCGTTTTGAGGAGTTCTCTGTCTCTACTGTTGACACCGATGATGTTAGAGAACTAAAGGTATCATACAATATTAATCGAAGAACTTTAAATAATACCAAAAGACATTTTATTAGAGGTGCTCGGACCTTCCAATGTTTTAATCAAGTTATCAAGGAAATAATCAACTCAACTGTGGCTGAGTATGTGGAGAAGGAGAGTTTAAAAGTCAGCAGTGACTTGAGAGTTGAGCAAAGCTTTGAAGATCTTGAAACTACATTTGAGGAAGGAGAAAAGTTTAGCTTTGATGTTGTACTTCAGCTTCAAGAGTAG

Protein sequence

>MsG0380011704.01.T01

MDHLAAAEAQLGQQRIRQKLEEVNVAAQTNLAPVQDHVNYTLQEKLNRSMMVCQDKYEGSKLQQKPGAMNDMISCADEAIQDSIKMLPLLTNKLKASFGIPDNNTEISSTRFEEFSVSTVDTDDVRELKVSYNINRRTLNNTKRHFIRGARTFQCFNQVIKEIINSTVAEYVEKESLKVSSDLRVEQSFEDLETTFEEGEKFSFDVVLQLQE*