Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016882.01.T01 | RDX78801.1 | 86.842 | 114 | 13 | 1 | 1 | 114 | 1 | 112 | 2.18E-64 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016882.01.T01 | F1SRI0 | 36.957 | 138 | 63 | 3 | 1 | 114 | 1 | 138 | 3.02E-22 | 87.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016882.01.T01 | A0A371FKL1 | 86.842 | 114 | 13 | 1 | 1 | 114 | 1 | 112 | 1.04e-64 | 201 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0380016882.01 | 0.866646 | 2.448383e-65 | 8.313828e-62 |
| MsG0080048058.01 | MsG0380016882.01 | 0.831306 | 1.799055e-55 | 1.944589e-52 |
| MsG0080048383.01 | MsG0380016882.01 | 0.815707 | 8.051744e-52 | 5.592652e-49 |
| MsG0080048952.01 | MsG0380016882.01 | 0.857732 | 1.335935e-62 | 3.329882e-59 |
| MsG0180000001.01 | MsG0380016882.01 | 0.876038 | 1.918591e-68 | 9.162736e-65 |
| MsG0180000142.01 | MsG0380016882.01 | 0.811088 | 8.338749e-51 | 5.114412e-48 |
| MsG0180000197.01 | MsG0380016882.01 | 0.808394 | 3.164941e-50 | 1.807608e-47 |
| MsG0180000446.01 | MsG0380016882.01 | 0.809081 | 2.256279e-50 | 1.312180e-47 |
| MsG0180000824.01 | MsG0380016882.01 | 0.806107 | 9.660415e-50 | 5.199306e-47 |
| MsG0180001117.01 | MsG0380016882.01 | 0.812828 | 3.482838e-51 | 2.237122e-48 |
| MsG0180001173.01 | MsG0380016882.01 | 0.845267 | 4.518134e-59 | 7.488522e-56 |
| MsG0180001237.01 | MsG0380016882.01 | 0.845711 | 3.423792e-59 | 5.756996e-56 |
| MsG0180001260.01 | MsG0380016882.01 | 0.822349 | 2.484856e-53 | 2.074627e-50 |
| MsG0180001294.01 | MsG0380016882.01 | 0.800070 | 1.712414e-48 | 7.899337e-46 |
| MsG0180001566.01 | MsG0380016882.01 | 0.862486 | 4.897701e-64 | 1.436909e-60 |
| MsG0180002071.01 | MsG0380016882.01 | 0.811288 | 7.546000e-51 | 4.652371e-48 |
| MsG0180002075.01 | MsG0380016882.01 | 0.814232 | 1.710580e-51 | 1.141399e-48 |
| MsG0180002273.01 | MsG0380016882.01 | 0.852732 | 3.806497e-61 | 8.029818e-58 |
| MsG0180003303.01 | MsG0380016882.01 | 0.810770 | 9.769408e-51 | 5.941438e-48 |
| MsG0180003337.01 | MsG0380016882.01 | 0.828224 | 1.012509e-54 | 1.000152e-51 |
| MsG0180003444.01 | MsG0380016882.01 | 0.842296 | 2.820193e-58 | 4.257176e-55 |
| MsG0180003586.01 | MsG0380016882.01 | 0.802251 | 6.131057e-49 | 2.989044e-46 |
| MsG0180003822.01 | MsG0380016882.01 | 0.832817 | 7.612024e-56 | 8.604508e-53 |
| MsG0180003977.01 | MsG0380016882.01 | 0.803219 | 3.870353e-49 | 1.933989e-46 |
| MsG0180004147.01 | MsG0380016882.01 | 0.808600 | 2.859821e-50 | 1.642073e-47 |
| MsG0180004258.01 | MsG0380016882.01 | 0.813687 | 2.256848e-51 | 1.483815e-48 |
| MsG0180004388.01 | MsG0380016882.01 | 0.817691 | 2.892038e-52 | 2.120781e-49 |
| MsG0180004754.01 | MsG0380016882.01 | 0.803810 | 2.918167e-49 | 1.480521e-46 |
| MsG0180004767.01 | MsG0380016882.01 | 0.819738 | 9.921593e-53 | 7.699186e-50 |
| MsG0180004989.01 | MsG0380016882.01 | 0.816351 | 5.783457e-52 | 4.088460e-49 |
| MsG0180004991.01 | MsG0380016882.01 | 0.828053 | 1.113431e-54 | 1.094385e-51 |
| MsG0180005233.01 | MsG0380016882.01 | 0.812893 | 3.371813e-51 | 2.169645e-48 |
| MsG0180005443.01 | MsG0380016882.01 | 0.816673 | 4.899059e-52 | 3.493743e-49 |
| MsG0180005451.01 | MsG0380016882.01 | 0.819605 | 1.063916e-52 | 8.225066e-50 |
| MsG0180005493.01 | MsG0380016882.01 | 0.808044 | 3.758315e-50 | 2.126652e-47 |
| MsG0180005504.01 | MsG0380016882.01 | 0.816656 | 4.942374e-52 | 3.523099e-49 |
| MsG0180005944.01 | MsG0380016882.01 | 0.821181 | 4.627984e-53 | 3.738499e-50 |
| MsG0180006023.01 | MsG0380016882.01 | 0.845942 | 2.964242e-59 | 5.021213e-56 |
| MsG0180006235.01 | MsG0380016882.01 | 0.856633 | 2.818611e-62 | 6.770247e-59 |
| MsG0280006367.01 | MsG0380016882.01 | 0.828667 | 7.914971e-55 | 7.919462e-52 |
| MsG0280010614.01 | MsG0380016882.01 | 0.815767 | 7.810813e-52 | 5.434293e-49 |
| MsG0280011293.01 | MsG0380016882.01 | 0.827380 | 1.615272e-54 | 1.556997e-51 |
| MsG0280011336.01 | MsG0380016882.01 | 0.868577 | 5.888623e-66 | 2.140958e-62 |
| MsG0380013548.01 | MsG0380016882.01 | 0.815279 | 1.002665e-51 | 6.882988e-49 |
| MsG0380013549.01 | MsG0380016882.01 | 0.806214 | 9.169302e-50 | 4.948793e-47 |
| MsG0380014489.01 | MsG0380016882.01 | 0.829150 | 6.047785e-55 | 6.137391e-52 |
| MsG0380014778.01 | MsG0380016882.01 | 0.830258 | 3.249387e-55 | 3.405858e-52 |
| MsG0380015713.01 | MsG0380016882.01 | 0.844034 | 9.705994e-59 | 1.547370e-55 |
| MsG0380015831.01 | MsG0380016882.01 | 0.808002 | 3.835653e-50 | 2.168107e-47 |
| MsG0380016483.01 | MsG0380016882.01 | 0.832121 | 1.132504e-55 | 1.253941e-52 |
| MsG0380016765.01 | MsG0380016882.01 | 0.808086 | 3.681010e-50 | 2.085299e-47 |
| MsG0380016859.01 | MsG0380016882.01 | 0.807332 | 5.322949e-50 | 2.956685e-47 |
| MsG0380016882.01 | MsG0380016905.01 | 0.815544 | 8.757065e-52 | 6.055203e-49 |
| MsG0380016882.01 | MsG0380016971.01 | 0.825778 | 3.893467e-54 | 3.583570e-51 |
| MsG0380016882.01 | MsG0380016985.01 | 0.806042 | 9.966675e-50 | 5.355349e-47 |
| MsG0380016882.01 | MsG0380016994.01 | 0.817300 | 3.541352e-52 | 2.569229e-49 |
| MsG0380016882.01 | MsG0380017049.01 | 0.845033 | 5.227259e-59 | 8.599112e-56 |
| MsG0380016882.01 | MsG0380017431.01 | 0.846984 | 1.539973e-59 | 2.697535e-56 |
| MsG0380016882.01 | MsG0380017604.01 | 0.804175 | 2.451028e-49 | 1.255220e-46 |
| MsG0380016882.01 | MsG0380017719.01 | 0.818179 | 2.243073e-52 | 1.667094e-49 |
| MsG0380016882.01 | MsG0380017836.01 | 0.800026 | 1.748109e-48 | 8.054885e-46 |
| MsG0380016882.01 | MsG0480018256.01 | 0.818971 | 1.483803e-52 | 1.127253e-49 |
| MsG0380016882.01 | MsG0480018462.01 | 0.826658 | 2.403547e-54 | 2.268288e-51 |
| MsG0380016882.01 | MsG0480018640.01 | 0.840273 | 9.602110e-58 | 1.360719e-54 |
| MsG0380016882.01 | MsG0480018641.01 | 0.892872 | 1.063188e-74 | 9.894784e-71 |
| MsG0380016882.01 | MsG0480018846.01 | 0.823050 | 1.706316e-53 | 1.453269e-50 |
| MsG0380016882.01 | MsG0480019034.01 | 0.843897 | 1.056416e-58 | 1.677063e-55 |
| MsG0380016882.01 | MsG0480020144.01 | 0.804374 | 2.227970e-49 | 1.146858e-46 |
| MsG0380016882.01 | MsG0480020242.01 | 0.854429 | 1.238528e-61 | 2.765049e-58 |
| MsG0380016882.01 | MsG0480020331.01 | 0.807357 | 5.257900e-50 | 2.922389e-47 |
| MsG0380016882.01 | MsG0480020540.01 | 0.815323 | 9.803782e-52 | 6.737898e-49 |
| MsG0380016882.01 | MsG0480020591.01 | 0.804852 | 1.770082e-49 | 9.225337e-47 |
| MsG0380016882.01 | MsG0480021156.01 | 0.811264 | 7.636758e-51 | 4.705484e-48 |
| MsG0380016882.01 | MsG0480021225.01 | 0.841248 | 5.330797e-58 | 7.786019e-55 |
| MsG0380016882.01 | MsG0480021240.01 | 0.812447 | 4.220976e-51 | 2.684559e-48 |
| MsG0380016882.01 | MsG0480021772.01 | 0.843507 | 1.342612e-58 | 2.105262e-55 |
| MsG0380016882.01 | MsG0480021812.01 | 0.846171 | 2.567794e-59 | 4.381317e-56 |
| MsG0380016882.01 | MsG0480021900.01 | 0.805074 | 1.591132e-49 | 8.339627e-47 |
| MsG0380016882.01 | MsG0480022094.01 | 0.818842 | 1.587483e-52 | 1.201665e-49 |
| MsG0380016882.01 | MsG0480022115.01 | 0.829607 | 4.681828e-55 | 4.815583e-52 |
| MsG0380016882.01 | MsG0480022228.01 | 0.837812 | 4.167121e-57 | 5.476058e-54 |
| MsG0380016882.01 | MsG0480022479.01 | 0.803921 | 2.766917e-49 | 1.407914e-46 |
| MsG0380016882.01 | MsG0480022480.01 | 0.826614 | 2.462465e-54 | 2.320948e-51 |
| MsG0380016882.01 | MsG0480022597.01 | 0.809002 | 2.346360e-50 | 1.361604e-47 |
| MsG0380016882.01 | MsG0480022598.01 | 0.801123 | 1.044540e-48 | 4.948984e-46 |
| MsG0380016882.01 | MsG0480022620.01 | 0.811724 | 6.067895e-51 | 3.784522e-48 |
| MsG0380016882.01 | MsG0480022717.01 | 0.829327 | 5.476573e-55 | 5.587811e-52 |
| MsG0380016882.01 | MsG0480023412.01 | 0.821021 | 5.037804e-53 | 4.051739e-50 |
| MsG0380016882.01 | MsG0480023463.01 | 0.807083 | 6.011403e-50 | 3.317335e-47 |
| MsG0380016882.01 | MsG0480023500.01 | 0.857591 | 1.470903e-62 | 3.649358e-59 |
| MsG0380016882.01 | MsG0480023718.01 | 0.803000 | 4.296159e-49 | 2.134673e-46 |
| MsG0380016882.01 | MsG0480023737.01 | 0.810947 | 8.947560e-51 | 5.467801e-48 |
| MsG0380016882.01 | MsG0480023755.01 | 0.804239 | 2.376718e-49 | 1.219128e-46 |
| MsG0380016882.01 | MsG0480023873.01 | 0.824944 | 6.132655e-54 | 5.512077e-51 |
| MsG0380016882.01 | MsG0480024010.01 | 0.820802 | 5.658067e-53 | 4.522432e-50 |
| MsG0380016882.01 | MsG0580024157.01 | 0.817903 | 2.590561e-52 | 1.910724e-49 |
| MsG0380016882.01 | MsG0580024382.01 | 0.803726 | 3.038232e-49 | 1.538107e-46 |
| MsG0380016882.01 | MsG0580024421.01 | 0.801802 | 7.583466e-49 | 3.655037e-46 |
| MsG0380016882.01 | MsG0580024478.01 | 0.803799 | 2.933431e-49 | 1.487866e-46 |
| MsG0380016882.01 | MsG0580024618.01 | 0.887158 | 1.824630e-72 | 1.341517e-68 |
| MsG0380016882.01 | MsG0580024682.01 | 0.813940 | 1.984097e-51 | 1.313390e-48 |
| MsG0380016882.01 | MsG0580024721.01 | 0.812457 | 4.199633e-51 | 2.671664e-48 |
| MsG0380016882.01 | MsG0580024733.01 | 0.825077 | 5.707195e-54 | 5.149051e-51 |
| MsG0380016882.01 | MsG0580025072.01 | 0.822479 | 2.317492e-53 | 1.942056e-50 |
| MsG0380016882.01 | MsG0580025184.01 | 0.836651 | 8.259143e-57 | 1.047362e-53 |
| MsG0380016882.01 | MsG0580025352.01 | 0.842046 | 3.283092e-58 | 4.916571e-55 |
| MsG0380016882.01 | MsG0580028060.01 | 0.824729 | 6.893597e-54 | 6.158093e-51 |
| MsG0380016882.01 | MsG0580029148.01 | 0.855255 | 7.133812e-62 | 1.636918e-58 |
| MsG0380016882.01 | MsG0580029189.01 | 0.829084 | 6.272070e-55 | 6.352643e-52 |
| MsG0380016882.01 | MsG0580029371.01 | 0.841336 | 5.054393e-58 | 7.402582e-55 |
| MsG0380016882.01 | MsG0580029588.01 | 0.836463 | 9.219957e-57 | 1.162807e-53 |
| MsG0380016882.01 | MsG0580029801.01 | 0.839202 | 1.824404e-57 | 2.501265e-54 |
| MsG0380016882.01 | MsG0580030204.01 | 0.838191 | 3.329168e-57 | 4.425312e-54 |
| MsG0380016882.01 | MsG0580030235.01 | 0.819112 | 1.378137e-52 | 1.050965e-49 |
| MsG0380016882.01 | MsG0680030685.01 | 0.811877 | 5.618098e-51 | 3.518214e-48 |
| MsG0380016882.01 | MsG0680030740.01 | 0.835428 | 1.687765e-56 | 2.063275e-53 |
| MsG0380016882.01 | MsG0680031508.01 | 0.826976 | 2.018554e-54 | 1.922623e-51 |
| MsG0380016882.01 | MsG0680031549.01 | 0.816075 | 6.665662e-52 | 4.676732e-49 |
| MsG0380016882.01 | MsG0680031719.01 | 0.814022 | 1.903309e-51 | 1.262790e-48 |
| MsG0380016882.01 | MsG0780036663.01 | 0.816114 | 6.533141e-52 | 4.588550e-49 |
| MsG0380016882.01 | MsG0780036950.01 | 0.827497 | 1.514686e-54 | 1.464783e-51 |
| MsG0380016882.01 | MsG0780037975.01 | 0.800652 | 1.303547e-48 | 6.102772e-46 |
| MsG0380016882.01 | MsG0780038443.01 | 0.801745 | 7.787757e-49 | 3.748048e-46 |
| MsG0380016882.01 | MsG0780038495.01 | 0.828399 | 9.187075e-55 | 9.121604e-52 |
| MsG0380016882.01 | MsG0780038937.01 | 0.851581 | 8.087665e-61 | 1.644440e-57 |
| MsG0380016882.01 | MsG0780039389.01 | 0.834221 | 3.396643e-56 | 4.004500e-53 |
| MsG0380016882.01 | MsG0780039712.01 | 0.815539 | 8.779709e-52 | 6.069983e-49 |
| MsG0380016882.01 | MsG0780039717.01 | 0.820121 | 8.109911e-53 | 6.361566e-50 |
| MsG0380016882.01 | MsG0780039845.01 | 0.873773 | 1.133448e-67 | 4.978349e-64 |
| MsG0380016882.01 | MsG0780039858.01 | 0.802579 | 5.247263e-49 | 2.579540e-46 |
| MsG0380016882.01 | MsG0780040030.01 | 0.855815 | 4.897588e-62 | 1.144982e-58 |
| MsG0380016882.01 | MsG0780040044.01 | 0.835189 | 1.939763e-56 | 2.354388e-53 |
| MsG0380016882.01 | MsG0780040190.01 | 0.802489 | 5.474802e-49 | 2.685258e-46 |
| MsG0380016882.01 | MsG0780040488.01 | 0.808110 | 3.637318e-50 | 2.061839e-47 |
| MsG0380016882.01 | MsG0780040688.01 | 0.838359 | 3.014212e-57 | 4.027414e-54 |
| MsG0380016882.01 | MsG0780040757.01 | 0.803139 | 4.019478e-49 | 2.004402e-46 |
| MsG0380016882.01 | MsG0780040856.01 | 0.800200 | 1.611491e-48 | 7.458037e-46 |
| MsG0380016882.01 | MsG0780040897.01 | 0.828504 | 8.668479e-55 | 8.632663e-52 |
| MsG0380016882.01 | MsG0780040926.01 | 0.804617 | 1.982131e-49 | 1.026712e-46 |
| MsG0380016882.01 | MsG0780041033.01 | 0.829068 | 6.330567e-55 | 6.408521e-52 |
| MsG0380016882.01 | MsG0780041239.01 | 0.820211 | 7.733500e-53 | 6.080700e-50 |
| MsG0380016882.01 | MsG0780041351.01 | 0.802583 | 5.237857e-49 | 2.575183e-46 |
| MsG0380016882.01 | MsG0780041390.01 | 0.813924 | 2.000657e-51 | 1.323795e-48 |
| MsG0380016882.01 | MsG0780041423.01 | 0.809763 | 1.611316e-50 | 9.543009e-48 |
| MsG0380016882.01 | MsG0780041469.01 | 0.824495 | 7.827450e-54 | 6.944403e-51 |
| MsG0380016882.01 | MsG0880041860.01 | 0.803750 | 3.003970e-49 | 1.521709e-46 |
| MsG0380016882.01 | MsG0880042543.01 | 0.821058 | 4.941173e-53 | 3.978055e-50 |
| MsG0380016882.01 | MsG0880042552.01 | 0.832170 | 1.101432e-55 | 1.221278e-52 |
| MsG0380016882.01 | MsG0880042760.01 | 0.819682 | 1.021499e-52 | 7.914317e-50 |
| MsG0380016882.01 | MsG0880042829.01 | 0.814118 | 1.812964e-51 | 1.205949e-48 |
| MsG0380016882.01 | MsG0880043252.01 | 0.812238 | 4.689096e-51 | 2.965456e-48 |
| MsG0380016882.01 | MsG0880043692.01 | 0.811056 | 8.474183e-51 | 5.193153e-48 |
| MsG0380016882.01 | MsG0880043716.01 | 0.810981 | 8.796162e-51 | 5.380283e-48 |
| MsG0380016882.01 | MsG0880043750.01 | 0.807729 | 4.384859e-50 | 2.460872e-47 |
| MsG0380016882.01 | MsG0880043886.01 | 0.802324 | 5.920504e-49 | 2.891934e-46 |
| MsG0380016882.01 | MsG0880044075.01 | 0.828350 | 9.441227e-55 | 9.359865e-52 |
| MsG0380016882.01 | MsG0880044565.01 | 0.804727 | 1.879720e-49 | 9.765195e-47 |
| MsG0380016882.01 | MsG0880044878.01 | 0.821613 | 3.678624e-53 | 3.007363e-50 |
| MsG0380016882.01 | MsG0880044917.01 | 0.838810 | 2.305411e-57 | 3.123027e-54 |
| MsG0380016882.01 | MsG0880045393.01 | 0.820097 | 8.212871e-53 | 6.438022e-50 |
| MsG0380016882.01 | MsG0880045838.01 | 0.811354 | 7.303023e-51 | 4.510277e-48 |
| MsG0380016882.01 | MsG0880046027.01 | 0.820928 | 5.292923e-53 | 4.245566e-50 |
| MsG0380016882.01 | MsG0880046069.01 | 0.808435 | 3.101122e-50 | 1.773082e-47 |
| MsG0380016882.01 | MsG0880046086.01 | 0.824514 | 7.743984e-54 | 6.874498e-51 |
| MsG0380016882.01 | MsG0880046091.01 | 0.829820 | 4.156633e-55 | 4.302732e-52 |
| MsG0380016882.01 | MsG0880046538.01 | 0.806269 | 8.928629e-50 | 4.825591e-47 |
| MsG0380016882.01 | MsG0880046762.01 | 0.864491 | 1.170229e-64 | 3.680937e-61 |
| MsG0380016882.01 | MsG0880047120.01 | 0.820100 | 8.197508e-53 | 6.426594e-50 |
| MsG0380016882.01 | MsG0880047192.01 | 0.832282 | 1.033309e-55 | 1.149473e-52 |
| MsG0380016882.01 | MsG0880047293.01 | 0.815444 | 9.215152e-52 | 6.354632e-49 |
| MsG0280006692.01 | MsG0380016882.01 | 0.807255 | 5.527783e-50 | 3.064258e-47 |
| MsG0280007048.01 | MsG0380016882.01 | 0.812119 | 4.976150e-51 | 3.136731e-48 |
| MsG0280007089.01 | MsG0380016882.01 | 0.802788 | 4.751085e-49 | 2.348244e-46 |
| MsG0280007440.01 | MsG0380016882.01 | 0.802497 | 5.455202e-49 | 2.676180e-46 |
| MsG0280007564.01 | MsG0380016882.01 | 0.806646 | 7.436436e-50 | 4.057460e-47 |
| MsG0280007609.01 | MsG0380016882.01 | 0.870369 | 1.537129e-66 | 5.963967e-63 |
| MsG0280007764.01 | MsG0380016882.01 | 0.830568 | 2.729353e-55 | 2.886425e-52 |
| MsG0280007790.01 | MsG0380016882.01 | 0.856170 | 3.855358e-62 | 9.119015e-59 |
| MsG0280007876.01 | MsG0380016882.01 | 0.821587 | 3.730763e-53 | 3.047649e-50 |
| MsG0280008004.01 | MsG0380016882.01 | 0.835831 | 1.334468e-56 | 1.651163e-53 |
| MsG0280008614.01 | MsG0380016882.01 | 0.806954 | 6.399675e-50 | 3.519919e-47 |
| MsG0280009165.01 | MsG0380016882.01 | 0.803826 | 2.896119e-49 | 1.469968e-46 |
| MsG0280009255.01 | MsG0380016882.01 | 0.814273 | 1.675646e-51 | 1.119332e-48 |
| MsG0280009514.01 | MsG0380016882.01 | 0.850162 | 2.028834e-60 | 3.938439e-57 |
| MsG0280010001.01 | MsG0380016882.01 | 0.800992 | 1.110964e-48 | 5.246613e-46 |
| MsG0280010002.01 | MsG0380016882.01 | 0.855209 | 7.355127e-62 | 1.685033e-58 |
| MsG0280010022.01 | MsG0380016882.01 | 0.820844 | 5.534377e-53 | 4.428812e-50 |
| MsG0280010170.01 | MsG0380016882.01 | 0.842934 | 1.908726e-58 | 2.938915e-55 |
| MsG0280010389.01 | MsG0380016882.01 | 0.804835 | 1.785396e-49 | 9.300738e-47 |
| MsG0280010447.01 | MsG0380016882.01 | 0.800942 | 1.137616e-48 | 5.365308e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016882.01.T01 | MTR_1g102650 | 61.905 | 168 | 10 | 3 | 1 | 114 | 1 | 168 | 5.66e-60 | 181 |
| MsG0380016882.01.T01 | MTR_3g097015 | 100.000 | 56 | 0 | 0 | 1 | 56 | 1 | 56 | 1.13e-35 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016882.01.T01 | AT1G80500 | 71.852 | 135 | 17 | 2 | 1 | 114 | 1 | 135 | 7.52e-61 | 182 |
| MsG0380016882.01.T01 | AT1G80500 | 71.852 | 135 | 17 | 2 | 1 | 114 | 1 | 135 | 7.52e-61 | 182 |
Find 34 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAACTTCAGCTTCATAAA+TGG | 0.203222 | 3:+88967667 | None:intergenic |
| ATTAACTTTATTTGTATGTT+TGG | 0.287358 | 3:-88965510 | MsG0380016882.01.T01:CDS |
| AATGGAATTGAATTGAATTC+AGG | 0.308727 | 3:+88968052 | None:intergenic |
| TTGGCAAGGTCTTCGATAAA+TGG | 0.341809 | 3:-88967732 | MsG0380016882.01.T01:exon |
| CTTAATCCTCTATACTTGCC+TGG | 0.421165 | 3:-88965471 | MsG0380016882.01.T01:CDS |
| CCCATTTATGAAGCTGAAGT+TGG | 0.437019 | 3:-88967668 | MsG0380016882.01.T01:CDS |
| CAAAATGTGATGATGTGATT+CGG | 0.452065 | 3:+88965445 | None:intergenic |
| CCAACTTCAGCTTCATAAAT+GGG | 0.453649 | 3:+88967668 | None:intergenic |
| CTCAAGATCGCAATTCCGTT+CGG | 0.457227 | 3:-88967932 | MsG0380016882.01.T01:five_prime_UTR |
| TCTAATCTAAGACGCGTTGT+TGG | 0.457249 | 3:+88967997 | None:intergenic |
| TTCTGTTTCACAGGTACAGT+TGG | 0.467563 | 3:-88967751 | MsG0380016882.01.T01:intron |
| TCAATTCAATTCCATTCCAT+AGG | 0.496047 | 3:-88968045 | MsG0380016882.01.T01:five_prime_UTR |
| GACACAGTTGGACGCGATCA+AGG | 0.501695 | 3:+88967852 | None:intergenic |
| CAATTCAATTCCATTCCATA+GGG | 0.502063 | 3:-88968044 | MsG0380016882.01.T01:five_prime_UTR |
| CGGGAGCCAGGCAAGTATAG+AGG | 0.506185 | 3:+88965465 | None:intergenic |
| ATTGAACTCTGAAAACCCTA+TGG | 0.511870 | 3:+88968029 | None:intergenic |
| TGCAGCTCTTGATGTTGTAC+AGG | 0.526927 | 3:-88966957 | MsG0380016882.01.T01:CDS |
| ATGTTGTACAGGACCTTGCA+TGG | 0.534136 | 3:-88966946 | MsG0380016882.01.T01:CDS |
| AAAATGTGATGATGTGATTC+GGG | 0.541572 | 3:+88965446 | None:intergenic |
| CTACAAATACTTTCGTGCAA+GGG | 0.541996 | 3:+88965407 | None:intergenic |
| TCTACAAATACTTTCGTGCA+AGG | 0.546025 | 3:+88965406 | None:intergenic |
| TTGCAGGTACTTGAAATCAG+TGG | 0.562329 | 3:-88966789 | MsG0380016882.01.T01:intron |
| CAACATCAAGAGCTGCATGC+AGG | 0.564301 | 3:+88966963 | None:intergenic |
| AAACCTTGTTATGACACAGT+TGG | 0.568304 | 3:+88967840 | None:intergenic |
| CGTCCAACTGTGTCATAACA+AGG | 0.569184 | 3:-88967843 | MsG0380016882.01.T01:intron |
| ACTCTGAAAACCCTATGGAA+TGG | 0.573826 | 3:+88968034 | None:intergenic |
| GATGATGTGATTCGGGAGCC+AGG | 0.586619 | 3:+88965453 | None:intergenic |
| TTTCACAGGTACAGTTGGCA+AGG | 0.587411 | 3:-88967746 | MsG0380016882.01.T01:intron |
| GGTACTTGAAATCAGTGGAT+CGG | 0.590445 | 3:-88966784 | MsG0380016882.01.T01:CDS |
| CGATTTCGTAAATTACCGAA+CGG | 0.639745 | 3:+88967917 | None:intergenic |
| TAGCACTAGTAGTCCATGCA+AGG | 0.647310 | 3:+88966933 | None:intergenic |
| GGATCGGTTTAATGAACTCG+TGG | 0.653415 | 3:-88966768 | MsG0380016882.01.T01:CDS |
| GCTAACAATGATGAAACAAG+CGG | 0.680349 | 3:+88967703 | None:intergenic |
| AACAATGATGAAACAAGCGG+TGG | 0.749967 | 3:+88967706 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTTAAAAAATTAAAATG+TGG | + | Chr3:88967897-88967916 | None:intergenic | 10.0% |
| !! | TTAAATTGTGATTATAAATT+TGG | - | Chr3:88965906-88965925 | MsG0380016882.01.T01:intron | 10.0% |
| !! | AAAATAATTCTCTATGATAA+AGG | + | Chr3:88966753-88966772 | None:intergenic | 15.0% |
| !! | AAGAAGCAAATTAAATTAAA+TGG | + | Chr3:88966871-88966890 | None:intergenic | 15.0% |
| !! | ACAAAAATAATCCTAAAATA+TGG | + | Chr3:88966805-88966824 | None:intergenic | 15.0% |
| !! | ATTCTTAATAGTTTCTATTA+TGG | + | Chr3:88966217-88966236 | None:intergenic | 15.0% |
| !! | ATTGCAAAATAATTTAAACT+CGG | + | Chr3:88966432-88966451 | None:intergenic | 15.0% |
| !! | GTTAACAAATAATTAAAGAA+AGG | + | Chr3:88967192-88967211 | None:intergenic | 15.0% |
| !!! | AATTTAATTTGCTTCTTTAA+TGG | - | Chr3:88966874-88966893 | MsG0380016882.01.T01:intron | 15.0% |
| !!! | ATTAACTTTATTTGTATGTT+TGG | - | Chr3:88967957-88967976 | MsG0380016882.01.T01:five_prime_UTR | 15.0% |
| !!! | ATTTAATTTGCTTCTTTAAT+GGG | - | Chr3:88966875-88966894 | MsG0380016882.01.T01:intron | 15.0% |
| !!! | ATTTTGATTTTCCATATTTT+AGG | - | Chr3:88966791-88966810 | MsG0380016882.01.T01:intron | 15.0% |
| !! | AATTAAATGGTTCTTATAGT+TGG | + | Chr3:88966858-88966877 | None:intergenic | 20.0% |
| !! | ATTAAATGGTTCTTATAGTT+GGG | + | Chr3:88966857-88966876 | None:intergenic | 20.0% |
| !! | ATTATTGTCTGAAAATGTTA+TGG | - | Chr3:88965974-88965993 | MsG0380016882.01.T01:intron | 20.0% |
| !! | CAAGTTCAATTATAAAACTT+TGG | - | Chr3:88966588-88966607 | MsG0380016882.01.T01:intron | 20.0% |
| !! | CTTCTAATTTATAATGAATC+AGG | + | Chr3:88966030-88966049 | None:intergenic | 20.0% |
| !! | GTAAATGCTAATTACTAATA+AGG | + | Chr3:88967560-88967579 | None:intergenic | 20.0% |
| !!! | AGTATTGTTCAATCTTTTAT+TGG | - | Chr3:88965834-88965853 | MsG0380016882.01.T01:intron | 20.0% |
| !!! | CATGGATCAATTTAATTTAT+GGG | - | Chr3:88965938-88965957 | MsG0380016882.01.T01:intron | 20.0% |
| !!! | TAACATTTTCAGACAATAAT+TGG | + | Chr3:88965974-88965993 | None:intergenic | 20.0% |
| !!! | TCATGGATCAATTTAATTTA+TGG | - | Chr3:88965937-88965956 | MsG0380016882.01.T01:intron | 20.0% |
| !!! | TGAAATATTGATAGTAAGAA+GGG | + | Chr3:88967743-88967762 | None:intergenic | 20.0% |
| !!! | TGTAATATTGATAGTAAGAA+GGG | + | Chr3:88967807-88967826 | None:intergenic | 20.0% |
| !!! | TTCAATCTTTTATTGGTTTA+TGG | - | Chr3:88965841-88965860 | MsG0380016882.01.T01:intron | 20.0% |
| ! | AAAGTATAAATAAGAGACCA+CGG | - | Chr3:88967325-88967344 | MsG0380016882.01.T01:intron | 25.0% |
| ! | AAATGAATTGATAGAGTTCA+TGG | - | Chr3:88967396-88967415 | MsG0380016882.01.T01:intron | 25.0% |
| ! | AATGCTAATTACTAATAAGG+AGG | + | Chr3:88967557-88967576 | None:intergenic | 25.0% |
| ! | AATGGAATTGAATTGAATTC+AGG | + | Chr3:88965418-88965437 | None:intergenic | 25.0% |
| ! | ACATCATAACACACTTAAAA+TGG | + | Chr3:88967693-88967712 | None:intergenic | 25.0% |
| ! | AGAATAGTTACTGTAGTTAA+GGG | - | Chr3:88967251-88967270 | MsG0380016882.01.T01:intron | 25.0% |
| ! | ATGCTAATTACTAATAAGGA+GGG | + | Chr3:88967556-88967575 | None:intergenic | 25.0% |
| ! | TACTATCAATATTTCACCAT+AGG | - | Chr3:88967747-88967766 | MsG0380016882.01.T01:intron | 25.0% |
| ! | TAGAATAGTTACTGTAGTTA+AGG | - | Chr3:88967250-88967269 | MsG0380016882.01.T01:intron | 25.0% |
| !! | GAAATATTGATAGTAAGAAG+GGG | + | Chr3:88967742-88967761 | None:intergenic | 25.0% |
| !! | GTAATATTGATAGTAAGAAG+GGG | + | Chr3:88967806-88967825 | None:intergenic | 25.0% |
| !! | GTGAAATATTGATAGTAAGA+AGG | + | Chr3:88967744-88967763 | None:intergenic | 25.0% |
| !! | GTGTAATATTGATAGTAAGA+AGG | + | Chr3:88967808-88967827 | None:intergenic | 25.0% |
| !! | GTTTCTATTATGGTTTTTCT+AGG | + | Chr3:88966207-88966226 | None:intergenic | 25.0% |
| !! | TAATATTGATAGTAAGAAGG+GGG | + | Chr3:88967805-88967824 | None:intergenic | 25.0% |
| !! | TTTAATTTATGGGATGTTAG+AGG | - | Chr3:88965948-88965967 | MsG0380016882.01.T01:intron | 25.0% |
| !! | TTTTACTCAAAATATGTACC+AGG | + | Chr3:88967625-88967644 | None:intergenic | 25.0% |
| !!! | TTCTTTTAGTTGATTCTTGT+TGG | - | Chr3:88965869-88965888 | MsG0380016882.01.T01:intron | 25.0% |
| AAAATGCATAAAGATGTACG+TGG | + | Chr3:88967007-88967026 | None:intergenic | 30.0% | |
| AACACCTATTGTAGAAAAGA+TGG | - | Chr3:88966075-88966094 | MsG0380016882.01.T01:intron | 30.0% | |
| AAGTATAAATAAGAGACCAC+GGG | - | Chr3:88967326-88967345 | MsG0380016882.01.T01:intron | 30.0% | |
| AATCGTGAAGCAACATAAAT+CGG | + | Chr3:88967070-88967089 | None:intergenic | 30.0% | |
| ATCCTATAATGCAAACAGAA+TGG | + | Chr3:88967933-88967952 | None:intergenic | 30.0% | |
| ATTTACATGTTTCACATAGC+AGG | - | Chr3:88967574-88967593 | MsG0380016882.01.T01:intron | 30.0% | |
| CAATTCAATTCCATTCCATA+GGG | - | Chr3:88965423-88965442 | MsG0380016882.01.T01:CDS | 30.0% | |
| CTATATCCTAACAGATAGAA+TGG | + | Chr3:88967217-88967236 | None:intergenic | 30.0% | |
| GAAGTGGAACAATATAAAAG+AGG | - | Chr3:88966948-88966967 | MsG0380016882.01.T01:CDS | 30.0% | |
| GTTAGTTACTTACTATTCGT+TGG | - | Chr3:88967285-88967304 | MsG0380016882.01.T01:intron | 30.0% | |
| TAACCACATTATAGCACTAA+AGG | + | Chr3:88967161-88967180 | None:intergenic | 30.0% | |
| TAACTTCCATTCTATCTGTT+AGG | - | Chr3:88967208-88967227 | MsG0380016882.01.T01:intron | 30.0% | |
| TACTATCAATATTACACCGT+AGG | - | Chr3:88967811-88967830 | MsG0380016882.01.T01:intron | 30.0% | |
| TCAAAGCATACTTCAAGAAT+TGG | + | Chr3:88967444-88967463 | None:intergenic | 30.0% | |
| TCAATTCAATTCCATTCCAT+AGG | - | Chr3:88965422-88965441 | MsG0380016882.01.T01:CDS | 30.0% | |
| TGATATAGAACATTATAGCG+TGG | - | Chr3:88966268-88966287 | MsG0380016882.01.T01:intron | 30.0% | |
| TGATTTAGAGATCAATGAGT+TGG | - | Chr3:88966236-88966255 | MsG0380016882.01.T01:intron | 30.0% | |
| TTCCATTCTGTTTGCATTAT+AGG | - | Chr3:88967928-88967947 | MsG0380016882.01.T01:five_prime_UTR | 30.0% | |
| TTCTAATCCACACAAAAACA+AGG | + | Chr3:88966386-88966405 | None:intergenic | 30.0% | |
| ! | AAAATGTGATGATGTGATTC+GGG | + | Chr3:88968024-88968043 | None:intergenic | 30.0% |
| ! | AATATTGATAGTAAGAAGGG+GGG | + | Chr3:88967740-88967759 | None:intergenic | 30.0% |
| ! | AGGGGTGTATATATCTAAAA+TGG | + | Chr3:88967724-88967743 | None:intergenic | 30.0% |
| ! | CAAAATGTGATGATGTGATT+CGG | + | Chr3:88968025-88968044 | None:intergenic | 30.0% |
| ! | CTTACTATTCGTTGGTTATT+TGG | - | Chr3:88967293-88967312 | MsG0380016882.01.T01:intron | 30.0% |
| ! | GCTGCTGTAATATTATTTTC+TGG | - | Chr3:88967494-88967513 | MsG0380016882.01.T01:intron | 30.0% |
| ! | TTGATTCTTGTTGGAAGTAT+TGG | - | Chr3:88965878-88965897 | MsG0380016882.01.T01:intron | 30.0% |
| !! | TAAATTTGGTTTGACACTCA+TGG | - | Chr3:88965920-88965939 | MsG0380016882.01.T01:intron | 30.0% |
| !! | TTGTGTGGATTAGAAAACAA+GGG | - | Chr3:88966391-88966410 | MsG0380016882.01.T01:intron | 30.0% |
| !! | TTTGTGTGGATTAGAAAACA+AGG | - | Chr3:88966390-88966409 | MsG0380016882.01.T01:intron | 30.0% |
| AATATGTACCAGGTATATGC+TGG | + | Chr3:88967615-88967634 | None:intergenic | 35.0% | |
| ACCTATTGTAGAAAAGATGG+TGG | - | Chr3:88966078-88966097 | MsG0380016882.01.T01:intron | 35.0% | |
| ACTTCAAGAATTGGTAAGCA+TGG | + | Chr3:88967435-88967454 | None:intergenic | 35.0% | |
| ATATGTACCAGGTATATGCT+GGG | + | Chr3:88967614-88967633 | None:intergenic | 35.0% | |
| ATCGTGAAGCAACATAAATC+GGG | + | Chr3:88967069-88967088 | None:intergenic | 35.0% | |
| CAATATAAAAGAGGCAAGAG+TGG | - | Chr3:88966957-88966976 | MsG0380016882.01.T01:CDS | 35.0% | |
| CCAACTTCAGCTTCATAAAT+GGG | + | Chr3:88965802-88965821 | None:intergenic | 35.0% | |
| CGATGTACTAGTCATATACA+AGG | + | Chr3:88967852-88967871 | None:intergenic | 35.0% | |
| CGATTTCGTAAATTACCGAA+CGG | + | Chr3:88965553-88965572 | None:intergenic | 35.0% | |
| CTACAAATACTTTCGTGCAA+GGG | + | Chr3:88968063-88968082 | None:intergenic | 35.0% | |
| GCTAACAATGATGAAACAAG+CGG | + | Chr3:88965767-88965786 | None:intergenic | 35.0% | |
| GTGAAAACATTCGAGAAAGT+TGG | - | Chr3:88966049-88966068 | MsG0380016882.01.T01:intron | 35.0% | |
| TAAAGATGTACGTGGATGTA+AGG | + | Chr3:88966999-88967018 | None:intergenic | 35.0% | |
| TCCAACTTCAGCTTCATAAA+TGG | + | Chr3:88965803-88965822 | None:intergenic | 35.0% | |
| TCCACACAAAAACAAGGTTA+TGG | + | Chr3:88966380-88966399 | None:intergenic | 35.0% | |
| TGCAAACAGAATGGAATTCA+TGG | + | Chr3:88967924-88967943 | None:intergenic | 35.0% | |
| TTGCCTTTAGTGCTATAATG+TGG | - | Chr3:88967155-88967174 | MsG0380016882.01.T01:intron | 35.0% | |
| ! | AAACCTTGTTATGACACAGT+TGG | + | Chr3:88965630-88965649 | None:intergenic | 35.0% |
| ! | AGAGATCAATGAGTTGGATA+GGG | - | Chr3:88966242-88966261 | MsG0380016882.01.T01:intron | 35.0% |
| ! | AGTGTGTTATGATGTTGACT+TGG | - | Chr3:88967698-88967717 | MsG0380016882.01.T01:CDS | 35.0% |
| ! | ATATTGATAGTAAGAAGGGG+GGG | + | Chr3:88967739-88967758 | None:intergenic | 35.0% |
| ! | ATTGAACTCTGAAAACCCTA+TGG | + | Chr3:88965441-88965460 | None:intergenic | 35.0% |
| ! | TAGAGATCAATGAGTTGGAT+AGG | - | Chr3:88966241-88966260 | MsG0380016882.01.T01:intron | 35.0% |
| ! | TCCACCATCTTTTCTACAAT+AGG | + | Chr3:88966082-88966101 | None:intergenic | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+CGG | - | Chr3:88966086-88966105 | MsG0380016882.01.T01:intron | 35.0% |
| !!! | TCCATAACCTTGTTTTTGTG+TGG | - | Chr3:88966376-88966395 | MsG0380016882.01.T01:intron | 35.0% |
| AAATCGGGTATGTATACCAC+AGG | + | Chr3:88967054-88967073 | None:intergenic | 40.0% | |
| AACAATGATGAAACAAGCGG+TGG | + | Chr3:88965764-88965783 | None:intergenic | 40.0% | |
| ACCTGCAAAGAGAATGCTAA+GGG | + | Chr3:88966666-88966685 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGCTCAAA+TGG | - | Chr3:88966153-88966172 | MsG0380016882.01.T01:intron | 40.0% | |
| ATTGTTCCACTTCCTACGAA+GGG | + | Chr3:88966941-88966960 | None:intergenic | 40.0% | |
| CAAAAGATGATATCTACCCG+TGG | + | Chr3:88967345-88967364 | None:intergenic | 40.0% | |
| CAAGACTTATCCCACTAAGT+GGG | + | Chr3:88966313-88966332 | None:intergenic | 40.0% | |
| CACGATTCTCGTAATGATGA+TGG | - | Chr3:88967083-88967102 | MsG0380016882.01.T01:intron | 40.0% | |
| CATTAAGAGCTTCTTCCAAG+AGG | - | Chr3:88967106-88967125 | MsG0380016882.01.T01:intron | 40.0% | |
| CCCATTTATGAAGCTGAAGT+TGG | - | Chr3:88965799-88965818 | MsG0380016882.01.T01:intron | 40.0% | |
| CTCCTTACTACAGAATCTAC+AGG | + | Chr3:88966142-88966161 | None:intergenic | 40.0% | |
| CTTAATCCTCTATACTTGCC+TGG | - | Chr3:88967996-88968015 | MsG0380016882.01.T01:five_prime_UTR | 40.0% | |
| GACCTGTAGATTCTGTAGTA+AGG | - | Chr3:88966137-88966156 | MsG0380016882.01.T01:intron | 40.0% | |
| GCAACTAATCATGTCTCCTA+CGG | + | Chr3:88967766-88967785 | None:intergenic | 40.0% | |
| GCAACTAATCATGTCTCCTA+TGG | + | Chr3:88967766-88967785 | None:intergenic | 40.0% | |
| GCTAAGGGATTAAAATGCTG+TGG | + | Chr3:88966651-88966670 | None:intergenic | 40.0% | |
| GCTGTGGAAACAAAAACAAG+AGG | + | Chr3:88966635-88966654 | None:intergenic | 40.0% | |
| GGTACTTGAAATCAGTGGAT+CGG | - | Chr3:88966683-88966702 | MsG0380016882.01.T01:intron | 40.0% | |
| GGTGCATGAGCTTTACATAA+AGG | - | Chr3:88967127-88967146 | MsG0380016882.01.T01:intron | 40.0% | |
| GTACCTGTGAAACAGAAATG+CGG | + | Chr3:88965713-88965732 | None:intergenic | 40.0% | |
| GTGATAATTTCCTTGACCTG+TGG | - | Chr3:88967035-88967054 | MsG0380016882.01.T01:intron | 40.0% | |
| TAATGCCACTGTATGACAGA+GGG | - | Chr3:88966453-88966472 | MsG0380016882.01.T01:intron | 40.0% | |
| TACCTGCAAAGAGAATGCTA+AGG | + | Chr3:88966667-88966686 | None:intergenic | 40.0% | |
| TATCCGCATTTCTGTTTCAC+AGG | - | Chr3:88965707-88965726 | MsG0380016882.01.T01:intron | 40.0% | |
| TATTGTTCCACTTCCTACGA+AGG | + | Chr3:88966942-88966961 | None:intergenic | 40.0% | |
| TTCTGTTTCACAGGTACAGT+TGG | - | Chr3:88965716-88965735 | MsG0380016882.01.T01:intron | 40.0% | |
| TTGCAGGTACTTGAAATCAG+TGG | - | Chr3:88966678-88966697 | MsG0380016882.01.T01:intron | 40.0% | |
| TTGGCAAGGTCTTCGATAAA+TGG | - | Chr3:88965735-88965754 | MsG0380016882.01.T01:intron | 40.0% | |
| ! | ACTCTGAAAACCCTATGGAA+TGG | + | Chr3:88965436-88965455 | None:intergenic | 40.0% |
| ! | TCTAATCTAAGACGCGTTGT+TGG | + | Chr3:88965473-88965492 | None:intergenic | 40.0% |
| AAGGAGAGTAGCTCAAATGG+AGG | - | Chr3:88966156-88966175 | MsG0380016882.01.T01:intron | 45.0% | |
| ACTAAGTGGGATCAGCTACA+TGG | + | Chr3:88966300-88966319 | None:intergenic | 45.0% | |
| AGGAGAGTAGCTCAAATGGA+GGG | - | Chr3:88966157-88966176 | MsG0380016882.01.T01:intron | 45.0% | |
| AGGGGGGGTAATCATATACA+AGG | + | Chr3:88967788-88967807 | None:intergenic | 45.0% | |
| ATGTAGCTGATCCCACTTAG+TGG | - | Chr3:88966299-88966318 | MsG0380016882.01.T01:intron | 45.0% | |
| ATGTTGTACAGGACCTTGCA+TGG | - | Chr3:88966521-88966540 | MsG0380016882.01.T01:intron | 45.0% | |
| CAGGTATATGCTGGGCAAAT+AGG | + | Chr3:88967606-88967625 | None:intergenic | 45.0% | |
| CCAAGACTTATCCCACTAAG+TGG | + | Chr3:88966314-88966333 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGTCT+TGG | - | Chr3:88966311-88966330 | MsG0380016882.01.T01:intron | 45.0% | |
| CGTCCAACTGTGTCATAACA+AGG | - | Chr3:88965624-88965643 | MsG0380016882.01.T01:intron | 45.0% | |
| CTAATGCCACTGTATGACAG+AGG | - | Chr3:88966452-88966471 | MsG0380016882.01.T01:intron | 45.0% | |
| CTATTTGCCCAGCATATACC+TGG | - | Chr3:88967604-88967623 | MsG0380016882.01.T01:intron | 45.0% | |
| CTCAAGATCGCAATTCCGTT+CGG | - | Chr3:88965535-88965554 | MsG0380016882.01.T01:intron | 45.0% | |
| GGTATGTATACCACAGGTCA+AGG | + | Chr3:88967048-88967067 | None:intergenic | 45.0% | |
| TAGCACTAGTAGTCCATGCA+AGG | + | Chr3:88966537-88966556 | None:intergenic | 45.0% | |
| TCCCTTAGCATTCTCTTTGC+AGG | - | Chr3:88966662-88966681 | MsG0380016882.01.T01:intron | 45.0% | |
| TGCAGCTCTTGATGTTGTAC+AGG | - | Chr3:88966510-88966529 | MsG0380016882.01.T01:intron | 45.0% | |
| TGTAAAGCTCATGCACCTCT+TGG | + | Chr3:88967124-88967143 | None:intergenic | 45.0% | |
| TGTAGCTGATCCCACTTAGT+GGG | - | Chr3:88966300-88966319 | MsG0380016882.01.T01:intron | 45.0% | |
| TTTCACAGGTACAGTTGGCA+AGG | - | Chr3:88965721-88965740 | MsG0380016882.01.T01:intron | 45.0% | |
| ! | GGATCGGTTTAATGAACTCG+TGG | - | Chr3:88966699-88966718 | MsG0380016882.01.T01:intron | 45.0% |
| AGGAGGGAACATGTACAACG+TGG | + | Chr3:88967540-88967559 | None:intergenic | 50.0% | |
| ATCCTCCCTCTGTCATACAG+TGG | + | Chr3:88966461-88966480 | None:intergenic | 50.0% | |
| ATGACCAGCTGTGACGTACA+CGG | + | Chr3:88966728-88966747 | None:intergenic | 50.0% | |
| CAACATCAAGAGCTGCATGC+AGG | + | Chr3:88966507-88966526 | None:intergenic | 50.0% | |
| !! | AGATGGTGGAAACTCGGCTT+AGG | - | Chr3:88966092-88966111 | MsG0380016882.01.T01:intron | 50.0% |
| GACACAGTTGGACGCGATCA+AGG | + | Chr3:88965618-88965637 | None:intergenic | 55.0% | |
| TAGAGGGTAGGGGAACACAG+TGG | + | Chr3:88966910-88966929 | None:intergenic | 55.0% | |
| TCCACTTCCTACGAAGGGCA+GGG | + | Chr3:88966936-88966955 | None:intergenic | 55.0% | |
| TGCCACTGTATGACAGAGGG+AGG | - | Chr3:88966456-88966475 | MsG0380016882.01.T01:intron | 55.0% | |
| TTCCACTTCCTACGAAGGGC+AGG | + | Chr3:88966937-88966956 | None:intergenic | 55.0% | |
| ! | GATGATGTGATTCGGGAGCC+AGG | + | Chr3:88968017-88968036 | None:intergenic | 55.0% |
| ACGAAGGGCAGGGGAGTAGA+GGG | + | Chr3:88966926-88966945 | None:intergenic | 60.0% | |
| CCACTTCCTACGAAGGGCAG+GGG | + | Chr3:88966935-88966954 | None:intergenic | 60.0% | |
| CGGGAGCCAGGCAAGTATAG+AGG | + | Chr3:88968005-88968024 | None:intergenic | 60.0% | |
| GTGTCCGTGTACGTCACAGC+TGG | - | Chr3:88966721-88966740 | MsG0380016882.01.T01:intron | 60.0% | |
| TACGAAGGGCAGGGGAGTAG+AGG | + | Chr3:88966927-88966946 | None:intergenic | 60.0% | |
| TCTACTCCCCTGCCCTTCGT+AGG | - | Chr3:88966926-88966945 | MsG0380016882.01.T01:intron | 60.0% | |
| AGGGCAGGGGAGTAGAGGGT+AGG | + | Chr3:88966922-88966941 | None:intergenic | 65.0% | |
| CCCCTGCCCTTCGTAGGAAG+TGG | - | Chr3:88966932-88966951 | MsG0380016882.01.T01:CDS | 65.0% | |
| GGCAGGGGAGTAGAGGGTAG+GGG | + | Chr3:88966920-88966939 | None:intergenic | 65.0% | |
| GGGCAGGGGAGTAGAGGGTA+GGG | + | Chr3:88966921-88966940 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 88965407 | 88968082 | 88965407 | ID=MsG0380016882.01;Name=MsG0380016882.01 |
| Chr3 | mRNA | 88965407 | 88968082 | 88965407 | ID=MsG0380016882.01.T01;Parent=MsG0380016882.01;Name=MsG0380016882.01.T01;_AED=0.41;_eAED=0.45;_QI=264|0.75|0.6|1|0|0|5|0|114 |
| Chr3 | exon | 88965407 | 88965539 | 88965407 | ID=MsG0380016882.01.T01:exon:5658;Parent=MsG0380016882.01.T01 |
| Chr3 | exon | 88966761 | 88966805 | 88966761 | ID=MsG0380016882.01.T01:exon:5657;Parent=MsG0380016882.01.T01 |
| Chr3 | exon | 88966932 | 88967017 | 88966932 | ID=MsG0380016882.01.T01:exon:5656;Parent=MsG0380016882.01.T01 |
| Chr3 | exon | 88967655 | 88967760 | 88967655 | ID=MsG0380016882.01.T01:exon:5655;Parent=MsG0380016882.01.T01 |
| Chr3 | exon | 88967844 | 88968082 | 88967844 | ID=MsG0380016882.01.T01:exon:5654;Parent=MsG0380016882.01.T01 |
| Chr3 | five_prime_UTR | 88967844 | 88968082 | 88967844 | ID=MsG0380016882.01.T01:five_prime_utr;Parent=MsG0380016882.01.T01 |
| Chr3 | five_prime_UTR | 88967736 | 88967760 | 88967736 | ID=MsG0380016882.01.T01:five_prime_utr;Parent=MsG0380016882.01.T01 |
| Chr3 | CDS | 88967655 | 88967735 | 88967655 | ID=MsG0380016882.01.T01:cds;Parent=MsG0380016882.01.T01 |
| Chr3 | CDS | 88966932 | 88967017 | 88966932 | ID=MsG0380016882.01.T01:cds;Parent=MsG0380016882.01.T01 |
| Chr3 | CDS | 88966761 | 88966805 | 88966761 | ID=MsG0380016882.01.T01:cds;Parent=MsG0380016882.01.T01 |
| Chr3 | CDS | 88965407 | 88965539 | 88965407 | ID=MsG0380016882.01.T01:cds;Parent=MsG0380016882.01.T01 |
| Gene Sequence |
| Protein sequence |
