AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001873.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001873.01.T01 MTR_1g045670 58.949 514 60 11 2 368 92 601 9.64e-176 526
MsG0180001873.01.T01 MTR_1g045670 79.231 130 26 1 401 529 827 956 5.34e-55 200
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001873.01.T01 AT3G24320 46.050 519 134 11 2 375 90 607 2.79e-127 399
MsG0180001873.01.T01 AT3G24320 61.417 127 48 1 401 526 826 952 1.17e-38 152
MsG0180001873.01.T01 AT3G24320 43.750 304 78 5 165 375 59 362 2.23e-61 217
MsG0180001873.01.T01 AT3G24320 61.417 127 48 1 401 526 581 707 7.83e-39 152

Find 207 sgRNAs with CRISPR-Local

Find 973 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTATGTATATGGACTTAT+TGG 0.101408 1:-28547204 MsG0180001873.01.T01:CDS
TTTGAAATAACCTTGAATTT+TGG 0.143407 1:+28544562 None:intergenic
AAGATAAAGTGTTTCTTAAT+TGG 0.179571 1:-28536898 MsG0180001873.01.T01:three_prime_UTR
CGTTTACTCAGAATATTATT+TGG 0.197776 1:-28535946 MsG0180001873.01.T01:three_prime_UTR
CTTTGGTTCTCAGGTATGTT+AGG 0.214976 1:-28544622 MsG0180001873.01.T01:intron
GTATTTGAGTAGCGTATTTC+AGG 0.223552 1:-28545862 MsG0180001873.01.T01:intron
GCGACCCTGTTTCTGATCTT+TGG 0.227784 1:-28545759 MsG0180001873.01.T01:CDS
GATAAAGATCTTCAGCTCTT+TGG 0.239855 1:+28537158 None:intergenic
AGGGAGGGTGGGTGGGGCAT+TGG 0.241504 1:-28546998 MsG0180001873.01.T01:CDS
GATGGTAAGCATCGGAATTT+TGG 0.243574 1:-28536015 MsG0180001873.01.T01:three_prime_UTR
ACATCAATGGTAATAATTAA+TGG 0.253747 1:-28537068 MsG0180001873.01.T01:three_prime_UTR
TTCGTTCCCTTTCTCTCTTC+CGG 0.260796 1:-28551092 MsG0180001873.01.T01:five_prime_UTR
ATCTGATACTCTGAGCTTCT+TGG 0.270720 1:+28549374 None:intergenic
GAAATATTGAAACATTTAAT+TGG 0.278079 1:-28543313 MsG0180001873.01.T01:CDS
TTAGCGCAACAGATCATTCT+TGG 0.282983 1:-28535715 MsG0180001873.01.T01:three_prime_UTR
TTAGGCTTTGTTTGGAAGAT+AGG 0.283315 1:-28547026 MsG0180001873.01.T01:intron
AGGAGAGAAGGGAGGGTGGG+TGG 0.287437 1:-28547006 MsG0180001873.01.T01:CDS
TTCTTTGGTTTCAGAATCTT+AGG 0.288160 1:-28547719 MsG0180001873.01.T01:intron
CCAGGAAACCCCTATGTATA+TGG 0.292216 1:-28547213 MsG0180001873.01.T01:intron
TGATTAGCAGAGTTTCTATT+TGG 0.293781 1:+28536078 None:intergenic
TTCCTGGAACTAGGAAATAA+AGG 0.294559 1:+28536114 None:intergenic
TTCCTTTATTTCCTAGTTCC+AGG 0.297039 1:-28536116 MsG0180001873.01.T01:three_prime_UTR
GGGAGGGTGGGTGGGGCATT+GGG 0.301189 1:-28546997 MsG0180001873.01.T01:intron
GGTCCCACGTGGGTGGCTAC+TGG 0.307487 1:-28543292 MsG0180001873.01.T01:CDS
TTTCTTGTTCGAGCTTGAGC+TGG 0.308701 1:+28547431 None:intergenic
CCTATGTATATGGACTTATT+GGG 0.314962 1:-28547203 MsG0180001873.01.T01:CDS
CACAACAGGGCAACCAGCTC+TGG 0.320896 1:+28548255 None:intergenic
ACGTCCAAGTGGGCAGAATT+TGG 0.331384 1:-28545838 MsG0180001873.01.T01:CDS
ATTTCTCTTTAGGCTTTGTT+TGG 0.331646 1:-28547034 MsG0180001873.01.T01:intron
GCAAAAGGGACTTGCATTGC+AGG 0.339981 1:-28537407 MsG0180001873.01.T01:CDS
AACAAGCACAAGGCTCCTTT+TGG 0.344950 1:+28537456 None:intergenic
ACCACACTGCTTCCTGTTCC+CGG 0.350465 1:+28541280 None:intergenic
TCTACAAAGTTCAATATGAT+TGG 0.351830 1:+28543390 None:intergenic
GAGAGAAGGGAGGGTGGGTG+GGG 0.352287 1:-28547004 MsG0180001873.01.T01:CDS
TCCTCATGTGAAACTTCAAT+TGG 0.370921 1:+28537000 None:intergenic
CATCAATGGTAATAATTAAT+GGG 0.376593 1:-28537067 MsG0180001873.01.T01:three_prime_UTR
TAAGGGAGAAATATCTTATC+CGG 0.380643 1:-28541299 MsG0180001873.01.T01:CDS
GGATTTCTGCTATAAAATCT+TGG 0.385444 1:+28536950 None:intergenic
GAAATTATTGCATGTTGTAT+TGG 0.385811 1:-28535797 MsG0180001873.01.T01:three_prime_UTR
CAGTGTAACATGCTCAATTC+CGG 0.387233 1:-28544383 MsG0180001873.01.T01:CDS
AGACATTCTGAATGGTTTGA+TGG 0.391680 1:-28545781 MsG0180001873.01.T01:CDS
CCTACGTAGAGTTTCTTATC+TGG 0.396333 1:+28536814 None:intergenic
TTTGGTTCTCAGGTATGTTA+GGG 0.397494 1:-28544621 MsG0180001873.01.T01:intron
GTTTGGAAGATAGGAGAGAA+GGG 0.398794 1:-28547017 MsG0180001873.01.T01:CDS
TTTGGTGGTTCCAGCAATGA+TGG 0.398897 1:+28537474 None:intergenic
GTCAAGGTGTGATTCTAAAC+AGG 0.405584 1:-28545737 MsG0180001873.01.T01:CDS
TCTTGATAGAAGTGGCTGTT+GGG 0.407545 1:-28537369 MsG0180001873.01.T01:CDS
AGATAGGAGAGAAGGGAGGG+TGG 0.408847 1:-28547010 MsG0180001873.01.T01:CDS
ATGGGCACAACTTGCATTGA+TGG 0.412451 1:-28537277 MsG0180001873.01.T01:CDS
TTCTTGTTCGAGCTTGAGCT+GGG 0.417721 1:+28547432 None:intergenic
GAACTTCGATCCATCATTGC+TGG 0.422226 1:-28537484 MsG0180001873.01.T01:CDS
ATCAAACCATTCAGAATGTC+TGG 0.427480 1:+28545783 None:intergenic
GGAGAGAAGGGAGGGTGGGT+GGG 0.429057 1:-28547005 MsG0180001873.01.T01:CDS
TCAATTAGATTCATTGTTGA+GGG 0.430073 1:+28549156 None:intergenic
GGAGACTTCTATGAAACTCT+TGG 0.431107 1:-28548348 MsG0180001873.01.T01:CDS
TTCAATATTTCATTGAGCTC+AGG 0.431501 1:+28543325 None:intergenic
CTTGAATACTCAAATTTGCT+TGG 0.433294 1:-28549129 MsG0180001873.01.T01:CDS
CCTACTACAGGCATAGGTTC+TGG 0.437803 1:+28547159 None:intergenic
GAAATATCTTATCCGGGAAC+AGG 0.439192 1:-28541292 MsG0180001873.01.T01:CDS
TTCACCAAATTCTGCCCACT+TGG 0.439880 1:+28545834 None:intergenic
TAGCAGAGTTTCTATTTGGC+AGG 0.442928 1:+28536082 None:intergenic
CTTGACCAAAGATCAGAAAC+AGG 0.443900 1:+28545754 None:intergenic
GTCTCAACTTAGAGCTCCTA+AGG 0.447138 1:-28541317 MsG0180001873.01.T01:CDS
TCAGAATCTTAGGCAAACTT+TGG 0.447427 1:-28547709 MsG0180001873.01.T01:intron
GAGATTGCATCCAAAATTCA+AGG 0.450407 1:-28544572 MsG0180001873.01.T01:intron
CACCCAATGTGGGACTGTTA+AGG 0.450779 1:+28538137 None:intergenic
CTCAGGAATTCCTTCCCTCT+TGG 0.450796 1:+28537189 None:intergenic
AAGGAGGAGAAGGAGAATTC+CGG 0.451171 1:+28551073 None:intergenic
CTGTTTCTGATCTTTGGTCA+AGG 0.452817 1:-28545753 MsG0180001873.01.T01:CDS
GGATAAGATATTTCTCCCTT+AGG 0.453139 1:+28541301 None:intergenic
AGAAGCCTCGATTCGGAAGT+TGG 0.454853 1:+28536054 None:intergenic
CTCTTGATAGAAGTGGCTGT+TGG 0.456415 1:-28537370 MsG0180001873.01.T01:CDS
TCATTCCCTCTCGTTTCCTC+AGG 0.457006 1:-28551044 MsG0180001873.01.T01:intron
GAGAATTCCGGAAGAGAGAA+AGG 0.457119 1:+28551085 None:intergenic
TAGTTCCAACATACTAAAAC+AGG 0.458944 1:-28535759 MsG0180001873.01.T01:three_prime_UTR
AATTTCAATGATGATACAAA+TGG 0.459572 1:-28549458 MsG0180001873.01.T01:intron
GATAGGAGAGAAGGGAGGGT+GGG 0.460712 1:-28547009 MsG0180001873.01.T01:CDS
GAGTTTCTATTTGGCAGGCT+AGG 0.467931 1:+28536087 None:intergenic
CGAGGAACAGAGACTGCAAA+AGG 0.471797 1:-28537422 MsG0180001873.01.T01:CDS
AGCAATGATGGATCGAAGTT+CGG 0.472676 1:+28537486 None:intergenic
GCTCTTTGGATAACAATCTC+AGG 0.474099 1:+28537172 None:intergenic
GTCCCACGTGGGTGGCTACT+GGG 0.474837 1:-28543291 MsG0180001873.01.T01:intron
TGTTTGGAAGATAGGAGAGA+AGG 0.475005 1:-28547018 MsG0180001873.01.T01:CDS
TTCAATTAGATTCATTGTTG+AGG 0.475786 1:+28549155 None:intergenic
CGAGAGGGAATGAAGGAAGA+AGG 0.475917 1:+28551054 None:intergenic
CCAATAAGTCCATATACATA+GGG 0.476395 1:+28547204 None:intergenic
CGTGCACATCGATCGAAAGA+AGG 0.477385 1:-28536155 MsG0180001873.01.T01:three_prime_UTR
TACTCAGAATATTATTTGGC+CGG 0.479903 1:-28535942 MsG0180001873.01.T01:three_prime_UTR
ATGAAGGAAGAAGGAGGAGA+AGG 0.487014 1:+28551063 None:intergenic
CTGCAGAAAACTATGCAAAC+AGG 0.487569 1:-28537106 MsG0180001873.01.T01:CDS
GAAGAAACACACGTAAATTC+CGG 0.487982 1:+28544364 None:intergenic
GGAAGATAGGAGAGAAGGGA+GGG 0.487993 1:-28547013 MsG0180001873.01.T01:CDS
TCTTAATTGGCACTAGGGAA+TGG 0.489576 1:-28536885 MsG0180001873.01.T01:three_prime_UTR
GATTGACGAAGTAATATCTC+TGG 0.490505 1:-28541641 MsG0180001873.01.T01:CDS
GTCCTTAACAGTCCCACATT+GGG 0.491309 1:-28538139 MsG0180001873.01.T01:intron
GAGACTTCTATGAAACTCTT+GGG 0.495809 1:-28548347 MsG0180001873.01.T01:CDS
TTAAAGACCGGAAAGTTTCA+AGG 0.500248 1:-28549413 MsG0180001873.01.T01:five_prime_UTR
TTGGATGCAATCTCATAAGA+AGG 0.501103 1:+28544581 None:intergenic
CCCAATAAGTCCATATACAT+AGG 0.504850 1:+28547203 None:intergenic
GTGTTTCTTAATTGGCACTA+GGG 0.508539 1:-28536890 MsG0180001873.01.T01:three_prime_UTR
CCAGAACCTATGCCTGTAGT+AGG 0.508789 1:-28547159 MsG0180001873.01.T01:intron
AACAGGTATATCATTAATGC+AGG 0.510311 1:-28535742 MsG0180001873.01.T01:three_prime_UTR
ACAGGAAGCAGTGTGGTTCA+AGG 0.510474 1:-28541274 MsG0180001873.01.T01:CDS
TTGGATGATCTTACACGCAA+TGG 0.510915 1:-28547690 MsG0180001873.01.T01:CDS
TGTTTGTGCAGTCTGAAGGC+AGG 0.511359 1:-28548690 MsG0180001873.01.T01:intron
AACACTGTACACAAAGCAAT+GGG 0.511529 1:-28537295 MsG0180001873.01.T01:CDS
AGTGTTTCTTAATTGGCACT+AGG 0.513671 1:-28536891 MsG0180001873.01.T01:three_prime_UTR
GTAGTTCCAGACATTCTGAA+TGG 0.514478 1:-28545789 MsG0180001873.01.T01:CDS
TGCGGGTTTAAATCCCTTGG+CGG 0.515981 1:-28548298 MsG0180001873.01.T01:CDS
CACTAGGGAATGGCCACCCC+CGG 0.516802 1:-28536875 MsG0180001873.01.T01:three_prime_UTR
GGTCCTTAACAGTCCCACAT+TGG 0.522058 1:-28538140 MsG0180001873.01.T01:CDS
ATAGATTCTAACTTGAAGAA+TGG 0.524090 1:-28549105 MsG0180001873.01.T01:CDS
GCTTAACAGAAGCCTCGATT+CGG 0.528095 1:+28536047 None:intergenic
AAGATATCATGTTTAAAGAC+CGG 0.528771 1:-28549425 MsG0180001873.01.T01:five_prime_UTR
ACAACAGGGCAACCAGCTCT+GGG 0.532588 1:+28548256 None:intergenic
TGGAAGATAGGAGAGAAGGG+AGG 0.533144 1:-28547014 MsG0180001873.01.T01:CDS
TGTATTGTGGAGGAAGTTCA+AGG 0.534291 1:-28547455 MsG0180001873.01.T01:CDS
ATATGCGGGTTTAAATCCCT+TGG 0.534425 1:-28548301 MsG0180001873.01.T01:CDS
AATTGAAGTTTCACATGAGG+AGG 0.535305 1:-28536998 MsG0180001873.01.T01:three_prime_UTR
TACGTGTGTTTCTTCAGCAA+AGG 0.535657 1:-28544356 MsG0180001873.01.T01:intron
AAAGATCTTCTCACATATTG+TGG 0.538193 1:-28549336 MsG0180001873.01.T01:five_prime_UTR
TTATTCAGTTTGTTGAGTTG+AGG 0.538310 1:+28551166 None:intergenic
TTTGAAACTGCCAAGAGGGA+AGG 0.541249 1:-28537199 MsG0180001873.01.T01:CDS
ATTGAAACTCTTGATAGAAG+TGG 0.546230 1:-28537377 MsG0180001873.01.T01:CDS
CAACAATGAATCTAATTGAA+AGG 0.547593 1:-28549152 MsG0180001873.01.T01:CDS
AGAGAAAGGGAACGAAAGCG+AGG 0.547595 1:+28551099 None:intergenic
GAGGAAACGAGAGGGAATGA+AGG 0.550774 1:+28551047 None:intergenic
TCAGATAGCATCCCCAGAGC+TGG 0.552374 1:-28548268 MsG0180001873.01.T01:intron
TGCTAAGCTACTTGAATGGA+AGG 0.553515 1:-28543416 MsG0180001873.01.T01:CDS
CTTGAAGAGCCTATAGTCAC+CGG 0.554049 1:+28536856 None:intergenic
GAGGGAATGAAGGAAGAAGG+AGG 0.554994 1:+28551057 None:intergenic
TAAAGACCGGAAAGTTTCAA+GGG 0.558421 1:-28549412 MsG0180001873.01.T01:five_prime_UTR
GTGCACATCGATCGAAAGAA+GGG 0.558891 1:-28536154 MsG0180001873.01.T01:three_prime_UTR
CAGGAAGCAGTGTGGTTCAA+GGG 0.561932 1:-28541273 MsG0180001873.01.T01:intron
ATTCTAACTTGAAGAATGGA+AGG 0.563858 1:-28549101 MsG0180001873.01.T01:intron
TGTATTCTAGTTGAATATGC+GGG 0.564114 1:-28548315 MsG0180001873.01.T01:CDS
TTGTATTCTAGTTGAATATG+CGG 0.566102 1:-28548316 MsG0180001873.01.T01:CDS
TTCTCACATATTGTGGTGGA+AGG 0.566419 1:-28549329 MsG0180001873.01.T01:five_prime_UTR
TGGGCAGAATTTGGTGAAGG+GGG 0.568706 1:-28545829 MsG0180001873.01.T01:CDS
TGGCGGAAGAGTCCCTCACT+CGG 0.569300 1:-28551237 MsG0180001873.01.T01:five_prime_UTR
ATCTGATCGTAGACCGCCAA+GGG 0.570448 1:+28548285 None:intergenic
CTTGATAGAAGTGGCTGTTG+GGG 0.571214 1:-28537368 MsG0180001873.01.T01:CDS
GAATTGTCTAGTTACATCAA+TGG 0.571307 1:-28537081 MsG0180001873.01.T01:exon
ACTACTTGGATGCTGCAAGA+TGG 0.573084 1:-28537244 MsG0180001873.01.T01:CDS
CTGTTAAGCAATATAGCTGA+TGG 0.574362 1:-28536033 MsG0180001873.01.T01:three_prime_UTR
AAACACTGTACACAAAGCAA+TGG 0.576970 1:-28537296 MsG0180001873.01.T01:CDS
CATTCGTTGTGTTGTGCGTG+TGG 0.577365 1:-28551257 MsG0180001873.01.T01:five_prime_UTR
AAGGGAGAAATATCTTATCC+GGG 0.579668 1:-28541298 MsG0180001873.01.T01:CDS
TTGAAGAGCCTATAGTCACC+GGG 0.579926 1:+28536857 None:intergenic
AACATTTAATTGGTCCCACG+TGG 0.581952 1:-28543303 MsG0180001873.01.T01:CDS
AAGTGGGCAGAATTTGGTGA+AGG 0.584310 1:-28545832 MsG0180001873.01.T01:CDS
GAGAAAGGGAACGAAAGCGA+GGG 0.587557 1:+28551100 None:intergenic
TCATTGCTGGAACCACCAAA+AGG 0.587905 1:-28537471 MsG0180001873.01.T01:CDS
TCCAATTGAAGTTTCACATG+AGG 0.589411 1:-28537001 MsG0180001873.01.T01:three_prime_UTR
AGTGGGCAGAATTTGGTGAA+GGG 0.606015 1:-28545831 MsG0180001873.01.T01:CDS
TTCATACCTACTACAGGCAT+AGG 0.606169 1:+28547153 None:intergenic
AGATTGCTAAGCTACTTGAA+TGG 0.611550 1:-28543420 MsG0180001873.01.T01:CDS
AGAATTCCGGAAGAGAGAAA+GGG 0.612678 1:+28551086 None:intergenic
CTATGTATATGGACTTATTG+GGG 0.613324 1:-28547202 MsG0180001873.01.T01:CDS
GTGGGCAGAATTTGGTGAAG+GGG 0.613445 1:-28545830 MsG0180001873.01.T01:CDS
CACGCACAACACAACGAATG+TGG 0.614722 1:+28551260 None:intergenic
ATCAACCAACTTCCGAATCG+AGG 0.616628 1:-28536059 MsG0180001873.01.T01:three_prime_UTR
TTTAATTGGTCCCACGTGGG+TGG 0.617159 1:-28543299 MsG0180001873.01.T01:CDS
TACACGCAATGGTTATTCAG+TGG 0.620651 1:-28547679 MsG0180001873.01.T01:intron
TCACATATTGTGGTGGAAGG+AGG 0.621953 1:-28549326 MsG0180001873.01.T01:intron
ATGCAGTTACGCGTAAACGT+TGG 0.622224 1:+28535987 None:intergenic
TTTGTCTTGACAGTGTATTG+TGG 0.626135 1:-28547468 MsG0180001873.01.T01:intron
CCTGCAGAGTAAACTTGACG+TGG 0.627958 1:+28548627 None:intergenic
GAGGAACAGAGACTGCAAAA+GGG 0.628153 1:-28537421 MsG0180001873.01.T01:CDS
TGAGGTGAAGAATGAATATG+TGG 0.628703 1:+28551184 None:intergenic
TTGATAGAAGTGGCTGTTGG+GGG 0.631433 1:-28537367 MsG0180001873.01.T01:CDS
CAAGAACAGACACCGAGTGA+GGG 0.633004 1:+28551225 None:intergenic
GATGCAATCTCATAAGAAGG+AGG 0.635557 1:+28544584 None:intergenic
GACGAAGTAATATCTCTGGA+TGG 0.636880 1:-28541637 MsG0180001873.01.T01:CDS
ATATAGCTGATGGTAAGCAT+CGG 0.637167 1:-28536023 MsG0180001873.01.T01:three_prime_UTR
GATCTTCTCACATATTGTGG+TGG 0.637943 1:-28549333 MsG0180001873.01.T01:five_prime_UTR
ACAAGAACAGACACCGAGTG+AGG 0.638136 1:+28551224 None:intergenic
GGGCAGAATTTGGTGAAGGG+GGG 0.640513 1:-28545828 MsG0180001873.01.T01:CDS
GTCTTGACAGTGTATTGTGG+AGG 0.642804 1:-28547465 MsG0180001873.01.T01:intron
TCGTTGTGTTGTGCGTGTGG+CGG 0.645201 1:-28551254 MsG0180001873.01.T01:five_prime_UTR
TCTCAACTTAGAGCTCCTAA+GGG 0.649001 1:-28541316 MsG0180001873.01.T01:CDS
ATGCAATCTCATAAGAAGGA+GGG 0.653021 1:+28544585 None:intergenic
TATCTGATCGTAGACCGCCA+AGG 0.658829 1:+28548284 None:intergenic
AAGTCATAAGCTGTATACAC+CGG 0.663504 1:+28535923 None:intergenic
AGCTGCAATTATGTTCACAT+CGG 0.663628 1:-28535828 MsG0180001873.01.T01:three_prime_UTR
TAAGAAACTCTACGTAGGAG+AGG 0.665205 1:-28536809 MsG0180001873.01.T01:intron
AGGAGCTCTAAGTTGAGACA+TGG 0.668968 1:+28541321 None:intergenic
ACATTTAATTGGTCCCACGT+GGG 0.675111 1:-28543302 MsG0180001873.01.T01:CDS
CAATAAGTCCATATACATAG+GGG 0.675168 1:+28547205 None:intergenic
TATTTCAGGAACGTCCAAGT+GGG 0.679077 1:-28545848 MsG0180001873.01.T01:CDS
TAAGCTACTTGAATGGAAGG+AGG 0.685452 1:-28543413 MsG0180001873.01.T01:CDS
AAAGACCGGAAAGTTTCAAG+GGG 0.687705 1:-28549411 MsG0180001873.01.T01:five_prime_UTR
AGTATACCTGAGGAAACGAG+AGG 0.688534 1:+28551038 None:intergenic
GTATACCTGAGGAAACGAGA+GGG 0.689641 1:+28551039 None:intergenic
CAACAGGGCAACCAGCTCTG+GGG 0.696033 1:+28548257 None:intergenic
ATGACAGACGGATAATCTCG+AGG 0.699731 1:-28536186 MsG0180001873.01.T01:intron
GAAGAGCCTATAGTCACCGG+GGG 0.702625 1:+28536859 None:intergenic
ATATTTCATCAACAAGCACA+AGG 0.705941 1:+28537446 None:intergenic
GTATTTCAGGAACGTCCAAG+TGG 0.706411 1:-28545849 MsG0180001873.01.T01:CDS
TGAAGAGCCTATAGTCACCG+GGG 0.713684 1:+28536858 None:intergenic
AAGACCGGAAAGTTTCAAGG+GGG 0.715418 1:-28549410 MsG0180001873.01.T01:five_prime_UTR
TTGACCAAAGATCAGAAACA+GGG 0.719205 1:+28545755 None:intergenic
TAACCCAGTAGCCACCCACG+TGG 0.719610 1:+28543288 None:intergenic
CCAGATAAGAAACTCTACGT+AGG 0.723183 1:-28536814 MsG0180001873.01.T01:three_prime_UTR
GCTTGTTGATGAAATATGCG+AGG 0.734169 1:-28537440 MsG0180001873.01.T01:CDS
TCCGGGAACAGGAAGCAGTG+TGG 0.738189 1:-28541281 MsG0180001873.01.T01:CDS
AACCCAGTAGCCACCCACGT+GGG 0.743986 1:+28543289 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATCTTAAAGTTTATATA+AGG - Chr1:28547990-28548009 MsG0180001873.01.T01:intron 10.0%
!! TGAGAAATTAAATTATAATA+TGG - Chr1:28544533-28544552 MsG0180001873.01.T01:intron 10.0%
!! TTTATTATATAATATGTATC+TGG - Chr1:28539878-28539897 MsG0180001873.01.T01:intron 10.0%
!!! AATTTCTATGTTTTATTTTA+TGG - Chr1:28537440-28537459 MsG0180001873.01.T01:CDS 10.0%
!!! ACTATATTTATACTTAATTT+TGG - Chr1:28542488-28542507 MsG0180001873.01.T01:intron 10.0%
!!! ATAATTTAAAGTGAAAATTT+TGG + Chr1:28541990-28542009 None:intergenic 10.0%
!!! ATTATAATTTAATTTCTCAA+GGG + Chr1:28544532-28544551 None:intergenic 10.0%
!!! ATTTTGAATTTTTTGATAAA+TGG - Chr1:28536141-28536160 MsG0180001873.01.T01:three_prime_UTR 10.0%
!!! TATTATAATTTAATTTCTCA+AGG + Chr1:28544533-28544552 None:intergenic 10.0%
!!! TGTTTTTTAAAAAATATAAC+TGG - Chr1:28545835-28545854 MsG0180001873.01.T01:CDS 10.0%
!!! TTATTTTGTGTATTTTTTTT+TGG - Chr1:28547443-28547462 MsG0180001873.01.T01:CDS 10.0%
!! AAAAACAATGATGTTTATAT+GGG + Chr1:28546012-28546031 None:intergenic 15.0%
!! AAACATTAAATAATTCCAAA+GGG - Chr1:28548132-28548151 MsG0180001873.01.T01:intron 15.0%
!! AAATATTAGGTAAAAGTTAA+AGG + Chr1:28542715-28542734 None:intergenic 15.0%
!! AACATATTTAAAAAGAAAAG+GGG + Chr1:28538566-28538585 None:intergenic 15.0%
!! AATACTAAAATATTATGGTA+AGG - Chr1:28536169-28536188 MsG0180001873.01.T01:three_prime_UTR 15.0%
!! ACTATGAAGATAAATAATTA+TGG - Chr1:28544140-28544159 MsG0180001873.01.T01:intron 15.0%
!! AGAAATTCCTATAAAAAAAT+AGG + Chr1:28540521-28540540 None:intergenic 15.0%
!! AGAACATATTTAAAAAGAAA+AGG + Chr1:28538568-28538587 None:intergenic 15.0%
!! AGGTAAATACTAAAATATTA+TGG - Chr1:28536164-28536183 MsG0180001873.01.T01:three_prime_UTR 15.0%
!! ATAACGATACAATAATTTAT+TGG + Chr1:28540933-28540952 None:intergenic 15.0%
!! ATAATAATAAGCAATCTATT+AGG - Chr1:28548064-28548083 MsG0180001873.01.T01:intron 15.0%
!! ATCTAATTAGTAGTATAATT+AGG + Chr1:28539828-28539847 None:intergenic 15.0%
!! ATGTACTATTAAAATATTCA+TGG - Chr1:28549236-28549255 MsG0180001873.01.T01:intron 15.0%
!! ATTAAAAAATAAGCAGAATA+AGG + Chr1:28542020-28542039 None:intergenic 15.0%
!! CTATGAAGATAAATAATTAT+GGG - Chr1:28544141-28544160 MsG0180001873.01.T01:intron 15.0%
!! GAACATATTTAAAAAGAAAA+GGG + Chr1:28538567-28538586 None:intergenic 15.0%
!! TATGAAGATAAATAATTATG+GGG - Chr1:28544142-28544161 MsG0180001873.01.T01:intron 15.0%
!! TATTACTATAAAAAAGTTGA+TGG - Chr1:28538216-28538235 MsG0180001873.01.T01:intron 15.0%
!! TATTTATTTCAATAAAACTG+TGG - Chr1:28539154-28539173 MsG0180001873.01.T01:intron 15.0%
!! TGTACTATTAAAATATTCAT+GGG - Chr1:28549237-28549256 MsG0180001873.01.T01:intron 15.0%
!! TTAAAAAATAAGCAGAATAA+GGG + Chr1:28542019-28542038 None:intergenic 15.0%
!! TTACGAAATAAATAAATCAA+TGG + Chr1:28540345-28540364 None:intergenic 15.0%
!! TTGCTTATTATTATGATATT+TGG + Chr1:28548058-28548077 None:intergenic 15.0%
!! TTTCAATTACAAGTATTAAA+AGG + Chr1:28537898-28537917 None:intergenic 15.0%
!!! ATTAGATTATTTTTTATGTG+AGG + Chr1:28550306-28550325 None:intergenic 15.0%
!!! ATTTGTTAGTATTGAAATTT+AGG - Chr1:28544190-28544209 MsG0180001873.01.T01:intron 15.0%
!!! ATTTTTCTATCAACTTAAAT+TGG + Chr1:28538036-28538055 None:intergenic 15.0%
!!! CTATCTAAATTTGTTTTATA+AGG + Chr1:28539663-28539682 None:intergenic 15.0%
!!! CTTTTACCTAATATTTATTT+AGG - Chr1:28542719-28542738 MsG0180001873.01.T01:intron 15.0%
!!! TAAGCTAAAAGAAATTTTAA+TGG - Chr1:28539089-28539108 MsG0180001873.01.T01:intron 15.0%
!!! TAATGCTATTTAATTGATTA+AGG + Chr1:28540164-28540183 None:intergenic 15.0%
!!! TGAAAGTTTTAACATTAAAT+CGG + Chr1:28539698-28539717 None:intergenic 15.0%
!!! TGTTTTGCATATATATAAAT+AGG + Chr1:28545905-28545924 None:intergenic 15.0%
!!! TTAAGTTTTCTAATGAAATT+AGG - Chr1:28551052-28551071 MsG0180001873.01.T01:five_prime_UTR 15.0%
!!! TTTGTTAGTATTGAAATTTA+GGG - Chr1:28544191-28544210 MsG0180001873.01.T01:intron 15.0%
!!! TTTTTCTATCAACTTAAATT+GGG + Chr1:28538035-28538054 None:intergenic 15.0%
!! AAAACAGAAAAATCTAGATA+TGG + Chr1:28540821-28540840 None:intergenic 20.0%
!! AAAATGAAAACATTAATTGC+TGG - Chr1:28537916-28537935 MsG0180001873.01.T01:intron 20.0%
!! AAACAGACAATTACATAATT+TGG + Chr1:28542095-28542114 None:intergenic 20.0%
!! AAACGTTATGAAACTAAAAA+AGG - Chr1:28543954-28543973 MsG0180001873.01.T01:intron 20.0%
!! AAAGGACCTAAATAAATATT+AGG + Chr1:28542728-28542747 None:intergenic 20.0%
!! AAATACAAATTTATCACCTT+TGG + Chr1:28539139-28539158 None:intergenic 20.0%
!! AACATTAAATAATTCCAAAG+GGG - Chr1:28548133-28548152 MsG0180001873.01.T01:intron 20.0%
!! AAGAAAGAAATTGATGAAAT+CGG - Chr1:28543155-28543174 MsG0180001873.01.T01:intron 20.0%
!! AATTGATAAAAAGAATGAGT+TGG + Chr1:28550274-28550293 None:intergenic 20.0%
!! AATTTCAATGATGATACAAA+TGG - Chr1:28537484-28537503 MsG0180001873.01.T01:CDS 20.0%
!! ACAAATCACAAAAAAGATAA+AGG + Chr1:28542746-28542765 None:intergenic 20.0%
!! ACATCAATGGTAATAATTAA+TGG - Chr1:28549874-28549893 MsG0180001873.01.T01:intron 20.0%
!! ACCAATAATAATTTGAGAAA+AGG - Chr1:28536278-28536297 MsG0180001873.01.T01:intron 20.0%
!! AGTAATCCTAAATATGATAA+GGG + Chr1:28543840-28543859 None:intergenic 20.0%
!! ATAAAAAGTAATGCAATAAG+AGG + Chr1:28542217-28542236 None:intergenic 20.0%
!! ATGAAGATAAATAATTATGG+GGG - Chr1:28544143-28544162 MsG0180001873.01.T01:intron 20.0%
!! ATTACGTTTATTTAGTGAAA+AGG - Chr1:28543104-28543123 MsG0180001873.01.T01:intron 20.0%
!! ATTAGTATCCTGATTTAATT+AGG + Chr1:28544334-28544353 None:intergenic 20.0%
!! ATTTATCAGAAATAGACAAA+AGG + Chr1:28542806-28542825 None:intergenic 20.0%
!! CATCAATGGTAATAATTAAT+GGG - Chr1:28549875-28549894 MsG0180001873.01.T01:intron 20.0%
!! CTTTGCTTATATGAAAATAA+AGG - Chr1:28543732-28543751 MsG0180001873.01.T01:intron 20.0%
!! GAAAAACAATGATGTTTATA+TGG + Chr1:28546013-28546032 None:intergenic 20.0%
!! GAAACATTAAATAATTCCAA+AGG - Chr1:28548131-28548150 MsG0180001873.01.T01:intron 20.0%
!! GATTTAATGTTAAAACTTTC+AGG - Chr1:28539697-28539716 MsG0180001873.01.T01:intron 20.0%
!! GGAATTATTTAATGTTTCTT+CGG + Chr1:28548129-28548148 None:intergenic 20.0%
!! GTACTATTAAAATATTCATG+GGG - Chr1:28549238-28549257 MsG0180001873.01.T01:intron 20.0%
!! TAACAACATGAAAAAAGTTA+TGG - Chr1:28544084-28544103 MsG0180001873.01.T01:intron 20.0%
!! TAACATCACAGTATAAAAAT+TGG - Chr1:28545100-28545119 MsG0180001873.01.T01:intron 20.0%
!! TAATTCAACTTAAGAATTCT+GGG + Chr1:28542906-28542925 None:intergenic 20.0%
!! TCCATTGTTATCTTAAAAAT+GGG - Chr1:28546354-28546373 MsG0180001873.01.T01:intron 20.0%
!! TGCATATATATAAATAGGAA+AGG + Chr1:28545900-28545919 None:intergenic 20.0%
!! TTCTTACCAATTTCAATTAA+TGG - Chr1:28536432-28536451 MsG0180001873.01.T01:intron 20.0%
!! TTTATATCCTAAATTTCTTG+TGG + Chr1:28544779-28544798 None:intergenic 20.0%
!! TTTATGTGATGAATTATCAA+TGG + Chr1:28544840-28544859 None:intergenic 20.0%
!!! AAAACTGTTGATAGAAAAAA+GGG + Chr1:28543452-28543471 None:intergenic 20.0%
!!! AACTATTTTCAAGCAAAAAT+AGG + Chr1:28543247-28543266 None:intergenic 20.0%
!!! AAGATAAAGTGTTTCTTAAT+TGG - Chr1:28550044-28550063 MsG0180001873.01.T01:intron 20.0%
!!! AATATTATGGTAAGGTTTTT+TGG - Chr1:28536177-28536196 MsG0180001873.01.T01:three_prime_UTR 20.0%
!!! AATTCCTGATAAAAACTTTT+CGG + Chr1:28549911-28549930 None:intergenic 20.0%
!!! ACTGTTTAAGTTATTAATTG+CGG + Chr1:28548952-28548971 None:intergenic 20.0%
!!! ACTTTATTTACATATCTCTT+CGG - Chr1:28537952-28537971 MsG0180001873.01.T01:intron 20.0%
!!! AGAATTCTTAAGTTGAATTA+GGG - Chr1:28542906-28542925 MsG0180001873.01.T01:intron 20.0%
!!! AGTCTTTTAGTTATTAATTC+TGG - Chr1:28542061-28542080 MsG0180001873.01.T01:intron 20.0%
!!! ATCTTTTTTGTGATTTGTTT+TGG - Chr1:28542748-28542767 MsG0180001873.01.T01:intron 20.0%
!!! CATTTTCTTATTCTTATATC+TGG - Chr1:28541461-28541480 MsG0180001873.01.T01:intron 20.0%
!!! CTATGTTTTATTTTATGGTA+TGG - Chr1:28537445-28537464 MsG0180001873.01.T01:CDS 20.0%
!!! GGTTTTCTATAAATATTATG+TGG + Chr1:28537706-28537725 None:intergenic 20.0%
!!! GTTTAAACTTGTTTATACAT+TGG - Chr1:28542118-28542137 MsG0180001873.01.T01:intron 20.0%
!!! GTTTGAGAAAAAGTTTTAAA+GGG - Chr1:28540008-28540027 MsG0180001873.01.T01:intron 20.0%
!!! TAAAACTGTTGATAGAAAAA+AGG + Chr1:28543453-28543472 None:intergenic 20.0%
!!! TAGTTACATGAATCTTTTTA+AGG + Chr1:28543331-28543350 None:intergenic 20.0%
!!! TCCTTTTCTCAAATTATTAT+TGG + Chr1:28536282-28536301 None:intergenic 20.0%
!!! TCTTTTTGTTTTACCAAAAT+TGG + Chr1:28548534-28548553 None:intergenic 20.0%
!!! TGAAATTTATCCAAACTTTT+TGG - Chr1:28536010-28536029 MsG0180001873.01.T01:three_prime_UTR 20.0%
!!! TGACTAAAACAATTGTTATT+AGG + Chr1:28550391-28550410 None:intergenic 20.0%
!!! TGTTATCTTTTTTTTTTTCC+AGG - Chr1:28545252-28545271 MsG0180001873.01.T01:intron 20.0%
!!! TGTTTGAGAAAAAGTTTTAA+AGG - Chr1:28540007-28540026 MsG0180001873.01.T01:intron 20.0%
!!! TTAAGAAAGATAAAGTGTTA+AGG + Chr1:28549414-28549433 None:intergenic 20.0%
!!! TTATTTTCATATAAGCAAAG+TGG + Chr1:28543732-28543751 None:intergenic 20.0%
!!! TTCCTCTGAAATAAAATATT+GGG - Chr1:28542671-28542690 MsG0180001873.01.T01:intron 20.0%
!!! TTCTTTTTAAATATGTTCTC+AGG - Chr1:28538569-28538588 MsG0180001873.01.T01:intron 20.0%
!!! TTGAATTTTTTGATAAATGG+AGG - Chr1:28536144-28536163 MsG0180001873.01.T01:three_prime_UTR 20.0%
!!! TTTATAGTATTGGCTTATTA+TGG - Chr1:28546427-28546446 MsG0180001873.01.T01:intron 20.0%
!!! TTTCCTCTGAAATAAAATAT+TGG - Chr1:28542670-28542689 MsG0180001873.01.T01:intron 20.0%
!!! TTTCCTTCTAAATTTAGAAT+AGG + Chr1:28537363-28537382 None:intergenic 20.0%
!!! TTTGAAATAACCTTGAATTT+TGG + Chr1:28542383-28542402 None:intergenic 20.0%
!!! TTTGTGTATTTTTTTTTGGA+GGG - Chr1:28547447-28547466 MsG0180001873.01.T01:CDS 20.0%
!!! TTTTATAGGAATTTCTCATT+CGG - Chr1:28540525-28540544 MsG0180001873.01.T01:intron 20.0%
!!! TTTTGTGTATTTTTTTTTGG+AGG - Chr1:28547446-28547465 MsG0180001873.01.T01:CDS 20.0%
! AAAAAATTCATACCTACTAC+AGG + Chr1:28539798-28539817 None:intergenic 25.0%
! AAAATTGATCCATAAGTTGT+GGG + Chr1:28538080-28538099 None:intergenic 25.0%
! AAACACAACTTATTTGATGT+TGG - Chr1:28544575-28544594 MsG0180001873.01.T01:CDS 25.0%
! AACAGACAATGATGTTAATT+TGG + Chr1:28542298-28542317 None:intergenic 25.0%
! AACGCTTTATACCAAATATA+TGG - Chr1:28545694-28545713 MsG0180001873.01.T01:CDS 25.0%
! AAGATATCATGTTTAAAGAC+CGG - Chr1:28537517-28537536 MsG0180001873.01.T01:intron 25.0%
! AATACATATAATCAGATCGA+CGG - Chr1:28550568-28550587 MsG0180001873.01.T01:intron 25.0%
! AATCAAATCAAGTAGAAGAA+AGG + Chr1:28540850-28540869 None:intergenic 25.0%
! AATTGATTAAGGCTTAGATT+AGG + Chr1:28540153-28540172 None:intergenic 25.0%
! AGTCCTATTCTAAATTTAGA+AGG - Chr1:28537357-28537376 MsG0180001873.01.T01:CDS 25.0%
! AGTTTCAGATAATCTAAACA+TGG - Chr1:28548087-28548106 MsG0180001873.01.T01:intron 25.0%
! ATAGATTCTAACTTGAAGAA+TGG - Chr1:28537837-28537856 MsG0180001873.01.T01:intron 25.0%
! ATCCACTATAGATGAATTTA+AGG + Chr1:28547909-28547928 None:intergenic 25.0%
! ATCCTGATTTAATTAGGATT+AGG + Chr1:28544328-28544347 None:intergenic 25.0%
! ATTAAAATATTCATGGGGAA+GGG - Chr1:28549243-28549262 MsG0180001873.01.T01:intron 25.0%
! ATTACCAATATTGTGAGTAA+AGG - Chr1:28541564-28541583 MsG0180001873.01.T01:intron 25.0%
! ATTTCAGATTTGTAAACCTT+AGG - Chr1:28550474-28550493 MsG0180001873.01.T01:intron 25.0%
! CAACAATGAATCTAATTGAA+AGG - Chr1:28537790-28537809 MsG0180001873.01.T01:intron 25.0%
! CACTTTATCTTTCTTAACAT+CGG - Chr1:28549417-28549436 MsG0180001873.01.T01:five_prime_UTR 25.0%
! CAGTAATCCTAAATATGATA+AGG + Chr1:28543841-28543860 None:intergenic 25.0%
! CATAATTACATAAAACATGC+AGG + Chr1:28546694-28546713 None:intergenic 25.0%
! CGTTTACTCAGAATATTATT+TGG - Chr1:28550996-28551015 MsG0180001873.01.T01:intron 25.0%
! CTAATTCAACTTAAGAATTC+TGG + Chr1:28542907-28542926 None:intergenic 25.0%
! CTAGTAAAAATGTATGTTTG+TGG - Chr1:28548781-28548800 MsG0180001873.01.T01:intron 25.0%
! CTCCATTGTTATCTTAAAAA+TGG - Chr1:28546353-28546372 MsG0180001873.01.T01:intron 25.0%
! GAAATTATTGCATGTTGTAT+TGG - Chr1:28551145-28551164 MsG0180001873.01.T01:five_prime_UTR 25.0%
! GTATTGAAAACTTGAATGTA+GGG - Chr1:28536045-28536064 MsG0180001873.01.T01:three_prime_UTR 25.0%
! GTTAATTGAACAGGAATAAA+AGG + Chr1:28544068-28544087 None:intergenic 25.0%
! TAAAATTGATCCATAAGTTG+TGG + Chr1:28538081-28538100 None:intergenic 25.0%
! TAAAGATAGAATTCTATTGC+AGG - Chr1:28545140-28545159 MsG0180001873.01.T01:intron 25.0%
! TAAGTGCATGTTTGAATTAA+TGG - Chr1:28536542-28536561 MsG0180001873.01.T01:intron 25.0%
! TACCATTTCAAATACACATA+CGG + Chr1:28537269-28537288 None:intergenic 25.0%
! TATGCAAAACAATTTGTCAT+AGG - Chr1:28545914-28545933 MsG0180001873.01.T01:intron 25.0%
! TATTAAAATATTCATGGGGA+AGG - Chr1:28549242-28549261 MsG0180001873.01.T01:intron 25.0%
! TCAATGATAAACATTCCAAA+AGG + Chr1:28550712-28550731 None:intergenic 25.0%
! TCAATTAGATTCATTGTTGA+GGG + Chr1:28537789-28537808 None:intergenic 25.0%
! TCCACTATAGATGAATTTAA+GGG + Chr1:28547908-28547927 None:intergenic 25.0%
! TCTACAAAGTTCAATATGAT+TGG + Chr1:28543555-28543574 None:intergenic 25.0%
! TGAATATCCTAGATATTCAA+CGG + Chr1:28546878-28546897 None:intergenic 25.0%
! TGATTGAAGTGTAATTTCAA+AGG - Chr1:28541736-28541755 MsG0180001873.01.T01:intron 25.0%
! TGTATTGAAAACTTGAATGT+AGG - Chr1:28536044-28536063 MsG0180001873.01.T01:three_prime_UTR 25.0%
! TTAATGTTTCTTCGGATTTA+AGG + Chr1:28548121-28548140 None:intergenic 25.0%
! TTACCAATTTCAATTAATGG+AGG - Chr1:28536435-28536454 MsG0180001873.01.T01:intron 25.0%
! TTACCTCCATTAATTGAAAT+TGG + Chr1:28536441-28536460 None:intergenic 25.0%
! TTATACTGTGATGTTATGTT+TGG + Chr1:28545096-28545115 None:intergenic 25.0%
! TTCAATTAGATTCATTGTTG+AGG + Chr1:28537790-28537809 None:intergenic 25.0%
! TTGGAATATTATTCAATTCC+AGG - Chr1:28544686-28544705 MsG0180001873.01.T01:intron 25.0%
! TTGTTATGTATAATAACACC+TGG + Chr1:28544707-28544726 None:intergenic 25.0%
! TTTAAAAAACACCCTTGATA+AGG + Chr1:28545826-28545845 None:intergenic 25.0%
! TTTATACCAAATATATGGAC+TGG - Chr1:28545699-28545718 MsG0180001873.01.T01:CDS 25.0%
! TTTCATGTTGTTAATTGAAC+AGG + Chr1:28544077-28544096 None:intergenic 25.0%
!! AAACATGCTTTAGATTCTAA+AGG - Chr1:28545753-28545772 MsG0180001873.01.T01:CDS 25.0%
!! ACAAATTTCTGTTTTCTCTT+TGG - Chr1:28538487-28538506 MsG0180001873.01.T01:intron 25.0%
!! ACAATGATGTTAATTTGGTA+AGG + Chr1:28542293-28542312 None:intergenic 25.0%
!! AGAATTTGATATTTTGTGCT+TGG - Chr1:28549071-28549090 MsG0180001873.01.T01:intron 25.0%
!! ATCTAGATTTTTCTGTTTTG+AGG - Chr1:28540822-28540841 MsG0180001873.01.T01:intron 25.0%
!! ATTTTATAGCAGAAATCCAA+AGG - Chr1:28549997-28550016 MsG0180001873.01.T01:intron 25.0%
!! GTCTAATTTTTACGATGAAA+AGG + Chr1:28540720-28540739 None:intergenic 25.0%
!! GTCTTGTGTATTTAGTTTAA+AGG - Chr1:28538444-28538463 MsG0180001873.01.T01:intron 25.0%
!! TAAGTTATTAATTGCGGTTT+TGG + Chr1:28548946-28548965 None:intergenic 25.0%
!! TACAATTCTTTTACAGAAAG+AGG + Chr1:28547352-28547371 None:intergenic 25.0%
!! TCAAGCTGTTTAATTTACAT+TGG - Chr1:28538814-28538833 MsG0180001873.01.T01:intron 25.0%
!! TGACAGTTAACTTTTACATA+TGG - Chr1:28542837-28542856 MsG0180001873.01.T01:intron 25.0%
!! TGTTTGAAGCTATGTATTTA+GGG - Chr1:28547415-28547434 MsG0180001873.01.T01:CDS 25.0%
!! TTGTATTCTAGTTGAATATG+CGG - Chr1:28538626-28538645 MsG0180001873.01.T01:intron 25.0%
!! TTGTTTGAAGCTATGTATTT+AGG - Chr1:28547414-28547433 MsG0180001873.01.T01:CDS 25.0%
!! TTTAGATTCTAAAGGTAGAA+AGG - Chr1:28545761-28545780 MsG0180001873.01.T01:CDS 25.0%
!! TTTTAAATATGTTCTCAGGT+TGG - Chr1:28538573-28538592 MsG0180001873.01.T01:intron 25.0%
!!! AAACAGAAATTTGTTGAGAA+TGG + Chr1:28538481-28538500 None:intergenic 25.0%
!!! AAAGTTTTAAAGGGAAAAGT+AGG - Chr1:28540017-28540036 MsG0180001873.01.T01:intron 25.0%
!!! AGCAATGCCTATTTTTTTAT+AGG - Chr1:28540511-28540530 MsG0180001873.01.T01:intron 25.0%
!!! AGTGAAACTTTTAGCTTAAA+TGG - Chr1:28548189-28548208 MsG0180001873.01.T01:intron 25.0%
!!! ATATACCTGTTTTAGTATGT+TGG + Chr1:28551191-28551210 None:intergenic 25.0%
!!! CAGAATTCTTAAGTTGAATT+AGG - Chr1:28542905-28542924 MsG0180001873.01.T01:intron 25.0%
!!! CAGTGATAGTTTTATAGTAT+TGG - Chr1:28546417-28546436 MsG0180001873.01.T01:intron 25.0%
!!! GATTTTGTTATTTGAAGTAG+TGG - Chr1:28536214-28536233 MsG0180001873.01.T01:intron 25.0%
!!! TAATTTTTTGTGCATATACC+AGG - Chr1:28544300-28544319 MsG0180001873.01.T01:intron 25.0%
!!! TCCCATTTTTAAGATAACAA+TGG + Chr1:28546358-28546377 None:intergenic 25.0%
!!! TGGTTTGTTATTTTGATGTT+TGG + Chr1:28548038-28548057 None:intergenic 25.0%
!!! TGTGTTTCTATTCATGTTTT+GGG + Chr1:28544562-28544581 None:intergenic 25.0%
!!! TTGTGTTTCTATTCATGTTT+TGG + Chr1:28544563-28544582 None:intergenic 25.0%
!!! TTTCAAGTACATTTTTGACT+GGG - Chr1:28543072-28543091 MsG0180001873.01.T01:intron 25.0%
!!! TTTTAGCTTAAATGGATAGT+TGG - Chr1:28548197-28548216 MsG0180001873.01.T01:intron 25.0%
!!! TTTTGATGTTTGGCTTTATT+TGG + Chr1:28548028-28548047 None:intergenic 25.0%
AAAAATAAGCAGAATAAGGG+AGG + Chr1:28542016-28542035 None:intergenic 30.0%
AAAAGAGCAGTGTGAATAAA+AGG + Chr1:28541789-28541808 None:intergenic 30.0%
AAAATCATCAATACACTGCA+AGG + Chr1:28546140-28546159 None:intergenic 30.0%
AAAATCGAATGTAATCACAG+TGG - Chr1:28536303-28536322 MsG0180001873.01.T01:intron 30.0%
AAAGATCTTCTCACATATTG+TGG - Chr1:28537606-28537625 MsG0180001873.01.T01:intron 30.0%
AAAGATGATCTAAAAGAGAG+AGG + Chr1:28539595-28539614 None:intergenic 30.0%
AAATAAAGCAGAAGCAACAA+AGG + Chr1:28546091-28546110 None:intergenic 30.0%
AAATAGTTTCCTAGCTTAGT+AGG - Chr1:28543259-28543278 MsG0180001873.01.T01:intron 30.0%
AACACATGTATTTGTGAACA+CGG + Chr1:28539452-28539471 None:intergenic 30.0%
AACACTCAGAATATTGATCA+AGG + Chr1:28539009-28539028 None:intergenic 30.0%
AACAGGTATATCATTAATGC+AGG - Chr1:28551200-28551219 MsG0180001873.01.T01:five_prime_UTR 30.0%
AAGATGATCTAAAAGAGAGA+GGG + Chr1:28539594-28539613 None:intergenic 30.0%
AAGTAAGCACATCATTTATG+TGG + Chr1:28545421-28545440 None:intergenic 30.0%
AAGTATTCAACTGTCAATGA+TGG - Chr1:28546308-28546327 MsG0180001873.01.T01:intron 30.0%
AATAAAACTGTGGTTCAATG+TGG - Chr1:28539164-28539183 MsG0180001873.01.T01:intron 30.0%
AATCATACTTCCACATTTCA+AGG - Chr1:28546527-28546546 MsG0180001873.01.T01:intron 30.0%
AATGAAGAGATACCAATAGA+AGG + Chr1:28538542-28538561 None:intergenic 30.0%
ACAGACAACATATAGTATTC+AGG + Chr1:28549368-28549387 None:intergenic 30.0%
ACAGCATAAATGCATAAACA+AGG + Chr1:28539410-28539429 None:intergenic 30.0%
ACAGTCAAAGTAAAGCTATT+AGG - Chr1:28547106-28547125 MsG0180001873.01.T01:intron 30.0%
ACATCATTGTCTGTTTACTT+TGG - Chr1:28542303-28542322 MsG0180001873.01.T01:intron 30.0%
ACCCTAAAAAGGATATATAG+AGG - Chr1:28540302-28540321 MsG0180001873.01.T01:intron 30.0%
ACTTCACTTACCTATGTTAA+AGG - Chr1:28550213-28550232 MsG0180001873.01.T01:intron 30.0%
AGAAAAATCTAGATATGGCA+AGG + Chr1:28540816-28540835 None:intergenic 30.0%
AGCAATGATAGAGTCAAAAT+AGG + Chr1:28547814-28547833 None:intergenic 30.0%
AGCTGAGATAAAATTTGAAC+TGG + Chr1:28542437-28542456 None:intergenic 30.0%
AGGAAAATGATTTAGAGAGT+TGG - Chr1:28540055-28540074 MsG0180001873.01.T01:intron 30.0%
AGTAACAAAAAACTGCGAAT+AGG + Chr1:28537125-28537144 None:intergenic 30.0%
AGTACATCTTTAGACTACAT+TGG - Chr1:28540475-28540494 MsG0180001873.01.T01:intron 30.0%
AGTCATGACAAATAAAATGC+AGG + Chr1:28550630-28550649 None:intergenic 30.0%
ATATTGTCCCAAAAATCTTC+AGG - Chr1:28545556-28545575 MsG0180001873.01.T01:intron 30.0%
ATATTTCATCAACAAGCACA+AGG + Chr1:28549499-28549518 None:intergenic 30.0%
ATCATGTTGTGTTAACTTTC+TGG + Chr1:28544627-28544646 None:intergenic 30.0%
ATCTGAATATTGCATAACGA+AGG - Chr1:28544652-28544671 MsG0180001873.01.T01:intron 30.0%
ATGCCTTTATTATGTACCAA+TGG - Chr1:28546997-28547016 MsG0180001873.01.T01:intron 30.0%
ATGGACAAACAAAAACTACT+TGG - Chr1:28549684-28549703 MsG0180001873.01.T01:intron 30.0%
ATGTATGCAGAAATAAGTGA+TGG + Chr1:28540654-28540673 None:intergenic 30.0%
ATTAAATAATTCCAAAGGGG+TGG - Chr1:28548136-28548155 MsG0180001873.01.T01:intron 30.0%
ATTCTAACTTGAAGAATGGA+AGG - Chr1:28537841-28537860 MsG0180001873.01.T01:intron 30.0%
ATTGAAACTCTTGATAGAAG+TGG - Chr1:28549565-28549584 MsG0180001873.01.T01:intron 30.0%
ATTTATATTAGTGCCCTGAT+TGG - Chr1:28538770-28538789 MsG0180001873.01.T01:intron 30.0%
CAAAGTCCCTTATCATATTT+AGG - Chr1:28543831-28543850 MsG0180001873.01.T01:intron 30.0%
CAACTAATTCATCACTAACT+TGG - Chr1:28544900-28544919 MsG0180001873.01.T01:intron 30.0%
CAATAAGTCCATATACATAG+GGG + Chr1:28539740-28539759 None:intergenic 30.0%
CAGACAACATATAGTATTCA+GGG + Chr1:28549367-28549386 None:intergenic 30.0%
CATATCCTCAAAAATTCATC+AGG + Chr1:28545367-28545386 None:intergenic 30.0%
CCAATAAGTCCATATACATA+GGG + Chr1:28539741-28539760 None:intergenic 30.0%
CCCTAAAAAGGATATATAGA+GGG - Chr1:28540303-28540322 MsG0180001873.01.T01:intron 30.0%
CCTATGTATATGGACTTATT+GGG - Chr1:28539739-28539758 MsG0180001873.01.T01:intron 30.0%
CTAAATATGATAAGGGACTT+TGG + Chr1:28543833-28543852 None:intergenic 30.0%
CTAATAAGAACAGCTAGTAA+CGG + Chr1:28547512-28547531 None:intergenic 30.0%
CTATGTATATGGACTTATTG+GGG - Chr1:28539740-28539759 MsG0180001873.01.T01:intron 30.0%
CTCCTAATCCTAATTAAATC+AGG - Chr1:28544323-28544342 MsG0180001873.01.T01:intron 30.0%
CTGAAACCAAAGAAAACAAA+AGG + Chr1:28539217-28539236 None:intergenic 30.0%
CTGTAAAGTATGAAGAACAT+TGG + Chr1:28547273-28547292 None:intergenic 30.0%
CTTACATGTGTATTTCACTT+TGG - Chr1:28541293-28541312 MsG0180001873.01.T01:CDS 30.0%
CTTCACTTACCTATGTTAAA+GGG - Chr1:28550214-28550233 MsG0180001873.01.T01:intron 30.0%
GAAACAAGAAAAAGAAAGCA+AGG + Chr1:28537727-28537746 None:intergenic 30.0%
GAACAGGAATAAAAGGAATT+GGG + Chr1:28544061-28544080 None:intergenic 30.0%
GAACATGTGTTTATAAGTGT+TGG - Chr1:28548839-28548858 MsG0180001873.01.T01:intron 30.0%
GAATCCTTTACTCACAATAT+TGG + Chr1:28541571-28541590 None:intergenic 30.0%
GAATTGTCTAGTTACATCAA+TGG - Chr1:28549861-28549880 MsG0180001873.01.T01:intron 30.0%
GATCACAAAAAGTTCATTTC+AGG - Chr1:28547861-28547880 MsG0180001873.01.T01:intron 30.0%
GCAATGATAGAGTCAAAATA+GGG + Chr1:28547813-28547832 None:intergenic 30.0%
GCTTAAGCTTATCAATTAAG+AGG - Chr1:28548676-28548695 MsG0180001873.01.T01:CDS 30.0%
GGATTTCTGCTATAAAATCT+TGG + Chr1:28549995-28550014 None:intergenic 30.0%
GTAAATAGAACTCAATCTGA+CGG + Chr1:28547178-28547197 None:intergenic 30.0%
GTAACAAGAGAAAAAGAGTA+TGG - Chr1:28548977-28548996 MsG0180001873.01.T01:intron 30.0%
GTAATCACATATGTTAGTGT+TGG - Chr1:28536630-28536649 MsG0180001873.01.T01:intron 30.0%
GTCTAAAGATGTACTATCAA+TGG + Chr1:28540470-28540489 None:intergenic 30.0%
GTGATTAAGATGTTATGCTA+TGG - Chr1:28537232-28537251 MsG0180001873.01.T01:CDS 30.0%
GTTATCTTAAAAATGGGAAG+TGG - Chr1:28546360-28546379 MsG0180001873.01.T01:intron 30.0%
GTTCACAGAGGAAAAAATTA+AGG + Chr1:28537649-28537668 None:intergenic 30.0%
GTTTACACCACAAGAAATTT+AGG - Chr1:28544769-28544788 MsG0180001873.01.T01:intron 30.0%
TAAATAGAACTCAATCTGAC+GGG + Chr1:28547177-28547196 None:intergenic 30.0%
TAACAATGGAGCAAATACTA+TGG + Chr1:28546344-28546363 None:intergenic 30.0%
TAACCAAGGATATAGAATAG+TGG + Chr1:28548720-28548739 None:intergenic 30.0%
TAAGAAATACTTGACAAAGC+TGG + Chr1:28538876-28538895 None:intergenic 30.0%
TAAGATCAATGCCTTAATTG+CGG + Chr1:28548162-28548181 None:intergenic 30.0%
TAAGGGAGAAATATCTTATC+CGG - Chr1:28545643-28545662 MsG0180001873.01.T01:intron 30.0%
TAATACTATCCATCAAACAG+AGG + Chr1:28538201-28538220 None:intergenic 30.0%
TAATGCAATAAGAGGAACAA+GGG + Chr1:28542209-28542228 None:intergenic 30.0%
TACATTCAAATGCAACTTGA+AGG + Chr1:28545220-28545239 None:intergenic 30.0%
TACCGTATGTGTATTTGAAA+TGG - Chr1:28537264-28537283 MsG0180001873.01.T01:CDS 30.0%
TACTCAGAATATTATTTGGC+CGG - Chr1:28551000-28551019 MsG0180001873.01.T01:intron 30.0%
TACTGAACATTGTTCATAGA+CGG - Chr1:28548591-28548610 MsG0180001873.01.T01:intron 30.0%
TAGTTCCAACATACTAAAAC+AGG - Chr1:28551183-28551202 MsG0180001873.01.T01:five_prime_UTR 30.0%
TCAAAGTCTAGCAATAATCA+TGG + Chr1:28538940-28538959 None:intergenic 30.0%
TCATGATATTAGAGTTCCTA+AGG + Chr1:28550493-28550512 None:intergenic 30.0%
TGAAAGATGCTATAAATGAC+AGG + Chr1:28539369-28539388 None:intergenic 30.0%
TGAAAGTTCTTACTCAATGT+TGG + Chr1:28543057-28543076 None:intergenic 30.0%
TGAAATCATCACTTTCTCTT+TGG - Chr1:28546666-28546685 MsG0180001873.01.T01:intron 30.0%
TGAACAGGAATAAAAGGAAT+TGG + Chr1:28544062-28544081 None:intergenic 30.0%
TGACAAATAAAATGCAGGAA+AGG + Chr1:28550625-28550644 None:intergenic 30.0%
TGACCATTGGTACATAATAA+AGG + Chr1:28547003-28547022 None:intergenic 30.0%
TGATGCTTCATGTCTATATA+AGG - Chr1:28547941-28547960 MsG0180001873.01.T01:intron 30.0%
TGATGTTGATCTTTCGTTAA+TGG - Chr1:28538974-28538993 MsG0180001873.01.T01:intron 30.0%
TGATTAGCAGAGTTTCTATT+TGG + Chr1:28550867-28550886 None:intergenic 30.0%
TGTTGTTCAGTTTACAATTG+TGG - Chr1:28543914-28543933 MsG0180001873.01.T01:intron 30.0%
TTATTCATGTTCATCTCAAC+TGG - Chr1:28541963-28541982 MsG0180001873.01.T01:intron 30.0%
TTCAATATTTCATTGAGCTC+AGG + Chr1:28543620-28543639 None:intergenic 30.0%
TTCTTCATACTTTACAGCAA+TGG - Chr1:28547276-28547295 MsG0180001873.01.T01:intron 30.0%
TTGAAATGGTAGAATGCAAA+TGG - Chr1:28537278-28537297 MsG0180001873.01.T01:CDS 30.0%
TTGATTGAAACATGCGTTTA+TGG - Chr1:28546262-28546281 MsG0180001873.01.T01:intron 30.0%
TTGCACAAAACCAAAAAGTT+TGG + Chr1:28536023-28536042 None:intergenic 30.0%
TTTCATATAAGCAAAGTGGA+AGG + Chr1:28543728-28543747 None:intergenic 30.0%
TTTGGAAAGGATTTCTCATT+TGG - Chr1:28540261-28540280 MsG0180001873.01.T01:intron 30.0%
! AAACAAGGAGCTACTAATTT+TGG + Chr1:28539395-28539414 None:intergenic 30.0%
! AAACTTGATGTGTGTTGTTA+TGG - Chr1:28546800-28546819 MsG0180001873.01.T01:intron 30.0%
! AAATGTACCAACCATTTTCT+TGG - Chr1:28537151-28537170 MsG0180001873.01.T01:CDS 30.0%
! AACTTGATGTGTGTTGTTAT+GGG - Chr1:28546801-28546820 MsG0180001873.01.T01:intron 30.0%
! AATGAACTTTTTGTGATCAC+TGG + Chr1:28547859-28547878 None:intergenic 30.0%
! AGATTTTATACTGTGCCTTT+TGG - Chr1:28550694-28550713 MsG0180001873.01.T01:intron 30.0%
! AGCATGGAATGATTTTCAAT+AGG + Chr1:28541609-28541628 None:intergenic 30.0%
! AGGAAACAAAATCCAAGTTT+TGG + Chr1:28543708-28543727 None:intergenic 30.0%
! ATTTAGAATAGGACTTCACA+TGG + Chr1:28537352-28537371 None:intergenic 30.0%
! CAGTAGTGATTTCACAATTT+TGG + Chr1:28546394-28546413 None:intergenic 30.0%
! CATTCCGAAAAGTTTTTATC+AGG - Chr1:28549904-28549923 MsG0180001873.01.T01:intron 30.0%
! CCCTCTATATATCCTTTTTA+GGG + Chr1:28540306-28540325 None:intergenic 30.0%
! CTTGAATACTCAAATTTGCT+TGG - Chr1:28537813-28537832 MsG0180001873.01.T01:intron 30.0%
! GAGGTAAATAATACTAGTCT+TGG - Chr1:28536454-28536473 MsG0180001873.01.T01:intron 30.0%
! GCAATATTTTCCTTGAAATG+TGG + Chr1:28546540-28546559 None:intergenic 30.0%
! GTAAATTTTCTTCTTCCAGT+TGG - Chr1:28543383-28543402 MsG0180001873.01.T01:CDS 30.0%
! TAAACATTGATTATGCTTGC+TGG - Chr1:28541437-28541456 MsG0180001873.01.T01:intron 30.0%
! TAAATAATTATGGGGGTGTA+TGG - Chr1:28544150-28544169 MsG0180001873.01.T01:intron 30.0%
! TAAGATCGATATGCTTTTGT+AGG - Chr1:28536891-28536910 MsG0180001873.01.T01:three_prime_UTR 30.0%
! TCACTAGCTTCTTACAAATA+TGG + Chr1:28548258-28548277 None:intergenic 30.0%
! TCAGATTTTGTGATCTTTCA+TGG + Chr1:28538166-28538185 None:intergenic 30.0%
! TCCCTCTATATATCCTTTTT+AGG + Chr1:28540307-28540326 None:intergenic 30.0%
! TCTTCATCTTGCGATTTTAT+CGG + Chr1:28547602-28547621 None:intergenic 30.0%
! TGTATTCTAGTTGAATATGC+GGG - Chr1:28538627-28538646 MsG0180001873.01.T01:intron 30.0%
! TTCTTTGGTTTCAGAATCTT+AGG - Chr1:28539223-28539242 MsG0180001873.01.T01:intron 30.0%
! TTTTAGGCCTCCAAAAAATT+GGG + Chr1:28537022-28537041 None:intergenic 30.0%
! TTTTCGACTTTACTATACGA+GGG + Chr1:28540218-28540237 None:intergenic 30.0%
!! AAGAAACGTCGTTTTATATC+TGG - Chr1:28539528-28539547 MsG0180001873.01.T01:intron 30.0%
!! AAGAACAAAGTTGATGAACA+CGG + Chr1:28544026-28544045 None:intergenic 30.0%
!! AATAGTTGTCTGTTGCTTTA+TGG - Chr1:28549337-28549356 MsG0180001873.01.T01:five_prime_UTR 30.0%
!! ACTTTTGTTTCCCTTAATTC+TGG - Chr1:28541832-28541851 MsG0180001873.01.T01:intron 30.0%
!! AGAAACGTCGTTTTATATCT+GGG - Chr1:28539529-28539548 MsG0180001873.01.T01:intron 30.0%
!! AGCCCAATATTTTATTTCAG+AGG + Chr1:28542676-28542695 None:intergenic 30.0%
!! ATAGTATTGGCTTATTATGG+AGG - Chr1:28546430-28546449 MsG0180001873.01.T01:intron 30.0%
!! ATTTCTCTTTAGGCTTTGTT+TGG - Chr1:28539908-28539927 MsG0180001873.01.T01:intron 30.0%
!! CATTTTCTTCTGCTTTTGTT+TGG - Chr1:28542514-28542533 MsG0180001873.01.T01:intron 30.0%
!! CTGATGAATTTTTGAGGATA+TGG - Chr1:28545365-28545384 MsG0180001873.01.T01:intron 30.0%
!! CTTTCAAGTACATTTTTGAC+TGG - Chr1:28543071-28543090 MsG0180001873.01.T01:intron 30.0%
!! GCAATCATTATTTCTATGAC+AGG - Chr1:28547688-28547707 MsG0180001873.01.T01:CDS 30.0%
!! GCTTTTATTCTAGAAACTAC+AGG + Chr1:28545599-28545618 None:intergenic 30.0%
!! GTGTTTCTATTCATGTTTTG+GGG + Chr1:28544561-28544580 None:intergenic 30.0%
!! GTTTTAGTCAAAACCTCTAT+AGG - Chr1:28550401-28550420 MsG0180001873.01.T01:intron 30.0%
!! TAATCTAATACCTCTAGAAC+AGG - Chr1:28550317-28550336 MsG0180001873.01.T01:intron 30.0%
!! TGAAAAGGTATTTCAGCTAA+CGG - Chr1:28543119-28543138 MsG0180001873.01.T01:intron 30.0%
!! TGTATTTCACTTTGGAACAT+AGG - Chr1:28541301-28541320 MsG0180001873.01.T01:CDS 30.0%
!! TGTTTCTATTCATGTTTTGG+GGG + Chr1:28544560-28544579 None:intergenic 30.0%
!! TTATTCAGTTTGTTGAGTTG+AGG + Chr1:28535779-28535798 None:intergenic 30.0%
!! TTATTTCTGCATACATCTTG+AGG - Chr1:28540658-28540677 MsG0180001873.01.T01:intron 30.0%
!! TTTTGTTGTAAGGTTGAGTT+AGG - Chr1:28548887-28548906 MsG0180001873.01.T01:intron 30.0%
!! TTTTTCGACTTTACTATACG+AGG + Chr1:28540219-28540238 None:intergenic 30.0%
!!! AATGTGCCTTTTGTTTTCTT+TGG - Chr1:28539208-28539227 MsG0180001873.01.T01:intron 30.0%
!!! AATTTTTTCCTCTGTGAACA+TGG - Chr1:28537650-28537669 MsG0180001873.01.T01:intron 30.0%
!!! ACTAGAGTTTTGGAACTTTA+AGG - Chr1:28545964-28545983 MsG0180001873.01.T01:intron 30.0%
!!! CACTCGTAGAATTTTTAGTT+AGG + Chr1:28548913-28548932 None:intergenic 30.0%
!!! CTAGAGTTTTGGAACTTTAA+GGG - Chr1:28545965-28545984 MsG0180001873.01.T01:intron 30.0%
!!! GGAAAAATGCTCTAGTTTTT+CGG - Chr1:28537378-28537397 MsG0180001873.01.T01:CDS 30.0%
!!! GGGTTTTAGACAATGAATAA+AGG - Chr1:28544211-28544230 MsG0180001873.01.T01:intron 30.0%
!!! TAGAGTTTTGGAACTTTAAG+GGG - Chr1:28545966-28545985 MsG0180001873.01.T01:intron 30.0%
!!! TCTTTTTTTTTTTCCAGGTG+TGG - Chr1:28545257-28545276 MsG0180001873.01.T01:intron 30.0%
AAAAAACACCCTTGATAAGG+CGG + Chr1:28545823-28545842 None:intergenic 35.0%
AAAAATGCCAATACCACAAC+AGG + Chr1:28538704-28538723 None:intergenic 35.0%
AAAATAGCGACGAGTTAAAC+AGG + Chr1:28543497-28543516 None:intergenic 35.0%
AAAATGCCAATACCACAACA+GGG + Chr1:28538703-28538722 None:intergenic 35.0%
AAACACTGTACACAAAGCAA+TGG - Chr1:28549646-28549665 MsG0180001873.01.T01:intron 35.0%
AACACTGTACACAAAGCAAT+GGG - Chr1:28549647-28549666 MsG0180001873.01.T01:intron 35.0%
AACAGGCAATAAAAACTGGT+AGG - Chr1:28550334-28550353 MsG0180001873.01.T01:intron 35.0%
AACCAGGTCAAACTTAATCT+AGG - Chr1:28545060-28545079 MsG0180001873.01.T01:intron 35.0%
AACGAAGGAAGAAAAGTCTT+TGG - Chr1:28544667-28544686 MsG0180001873.01.T01:intron 35.0%
AAGGGAGAAATATCTTATCC+GGG - Chr1:28545644-28545663 MsG0180001873.01.T01:intron 35.0%
AAGTCATAAGCTGTATACAC+CGG + Chr1:28551022-28551041 None:intergenic 35.0%
AATAAAAGGAATTGGGCAAG+AGG + Chr1:28544054-28544073 None:intergenic 35.0%
AATAATAGCCATGTTCACAG+AGG + Chr1:28537661-28537680 None:intergenic 35.0%
AATCGCAAGATGAAGATAGT+TGG - Chr1:28547606-28547625 MsG0180001873.01.T01:intron 35.0%
AATTGAAGTTTCACATGAGG+AGG - Chr1:28549944-28549963 MsG0180001873.01.T01:intron 35.0%
ACAAAAGTTAAATCCCCTAG+GGG - Chr1:28547066-28547085 MsG0180001873.01.T01:intron 35.0%
ACCAAGTTTATCCTAGTTGT+TGG - Chr1:28541859-28541878 MsG0180001873.01.T01:intron 35.0%
ACGCAGTATTAAAAACCAAC+TGG + Chr1:28543401-28543420 None:intergenic 35.0%
ACTTGAATTTAGCAGTAGGT+AGG - Chr1:28545462-28545481 MsG0180001873.01.T01:intron 35.0%
AGAAAAAGCTCACCCTAAAA+AGG - Chr1:28540291-28540310 MsG0180001873.01.T01:intron 35.0%
AGACAAAAGTTAAATCCCCT+AGG - Chr1:28547064-28547083 MsG0180001873.01.T01:intron 35.0%
AGACATTCTGAATGGTTTGA+TGG - Chr1:28541161-28541180 MsG0180001873.01.T01:intron 35.0%
AGAGTCAAAATAGGGAATCA+CGG + Chr1:28547805-28547824 None:intergenic 35.0%
AGATTGCTAAGCTACTTGAA+TGG - Chr1:28543522-28543541 MsG0180001873.01.T01:intron 35.0%
AGCATAACCATTAACCAATC+AGG + Chr1:28538787-28538806 None:intergenic 35.0%
AGCTGCAATTATGTTCACAT+CGG - Chr1:28551114-28551133 MsG0180001873.01.T01:five_prime_UTR 35.0%
AGGAAATAGAATCATGCATC+AGG + Chr1:28542656-28542675 None:intergenic 35.0%
AGGCTTAGATTAGGAGAAAA+AGG + Chr1:28540144-28540163 None:intergenic 35.0%
AGTAAGACCTTCAACAAAGA+AGG + Chr1:28541526-28541545 None:intergenic 35.0%
AGTGTTTCTTAATTGGCACT+AGG - Chr1:28550051-28550070 MsG0180001873.01.T01:intron 35.0%
ATAAAAGGAATTGGGCAAGA+GGG + Chr1:28544053-28544072 None:intergenic 35.0%
ATATAGCTGATGGTAAGCAT+CGG - Chr1:28550919-28550938 MsG0180001873.01.T01:intron 35.0%
ATCAAACCATTCAGAATGTC+TGG + Chr1:28541162-28541181 None:intergenic 35.0%
ATCCTAGATTAAGTTTGACC+TGG + Chr1:28545065-28545084 None:intergenic 35.0%
ATCTCACTTGACAAGTCATT+TGG - Chr1:28550525-28550544 MsG0180001873.01.T01:intron 35.0%
ATCTTCAGTCATTTCATTCC+TGG - Chr1:28545178-28545197 MsG0180001873.01.T01:intron 35.0%
ATCTTTCATGGAACAATAGC+CGG + Chr1:28538154-28538173 None:intergenic 35.0%
ATGCAATCTCATAAGAAGGA+GGG + Chr1:28542360-28542379 None:intergenic 35.0%
ATGCCACTATTCTATATCCT+TGG - Chr1:28548714-28548733 MsG0180001873.01.T01:intron 35.0%
ATGCCATAAATGTGTTTGAG+AGG + Chr1:28541034-28541053 None:intergenic 35.0%
ATGCCATCTAACAGAAACAA+AGG + Chr1:28537321-28537340 None:intergenic 35.0%
ATTCTTGTTCTTCGTGGATT+TGG + Chr1:28544744-28544763 None:intergenic 35.0%
ATTTCTATGACAGGACCAAA+TGG - Chr1:28547697-28547716 MsG0180001873.01.T01:CDS 35.0%
CAAACTATTGATCCTTTGTG+TGG + Chr1:28547200-28547219 None:intergenic 35.0%
CAAACTCTGATACTCATGTA+TGG - Chr1:28540739-28540758 MsG0180001873.01.T01:intron 35.0%
CAAATACACATACGGTAAGT+TGG + Chr1:28537261-28537280 None:intergenic 35.0%
CAATGTTGGAAAACTTATGC+AGG + Chr1:28543043-28543062 None:intergenic 35.0%
CAGTACGAAGTATATACCAT+CGG + Chr1:28548576-28548595 None:intergenic 35.0%
CAGTACTGTGATAGTATGTT+TGG + Chr1:28545013-28545032 None:intergenic 35.0%
CAGTCAAATCCATAGATGTT+AGG + Chr1:28546165-28546184 None:intergenic 35.0%
CATTTGATGAGAGTTTGGTT+AGG - Chr1:28538413-28538432 MsG0180001873.01.T01:intron 35.0%
CCAAATGTCAATAACTAGCA+TGG + Chr1:28541625-28541644 None:intergenic 35.0%
CCACAAACACTTATGATTGA+AGG + Chr1:28536361-28536380 None:intergenic 35.0%
CCATGCTAGTTATTGACATT+TGG - Chr1:28541622-28541641 MsG0180001873.01.T01:CDS 35.0%
CCCAATAAGTCCATATACAT+AGG + Chr1:28539742-28539761 None:intergenic 35.0%
CCCTATGTATATGGACTTAT+TGG - Chr1:28539738-28539757 MsG0180001873.01.T01:intron 35.0%
CCTTCAATCATAAGTGTTTG+TGG - Chr1:28536358-28536377 MsG0180001873.01.T01:intron 35.0%
CTAACCAAACTCTCATCAAA+TGG + Chr1:28538415-28538434 None:intergenic 35.0%
CTAGAACAGGCAATAAAAAC+TGG - Chr1:28550330-28550349 MsG0180001873.01.T01:intron 35.0%
CTAGCTTCTTACAAATATGG+TGG + Chr1:28548255-28548274 None:intergenic 35.0%
CTGAGACTTAAAGAAACTGT+TGG - Chr1:28536816-28536835 MsG0180001873.01.T01:three_prime_UTR 35.0%
CTGATATGGTGATATCAGAA+GGG + Chr1:28549166-28549185 None:intergenic 35.0%
CTGTTAAGCAATATAGCTGA+TGG - Chr1:28550909-28550928 MsG0180001873.01.T01:intron 35.0%
CTTCTGGATTCTACTATTGT+AGG + Chr1:28546763-28546782 None:intergenic 35.0%
CTTGGAACATCTACTCAAAT+TGG - Chr1:28541405-28541424 MsG0180001873.01.T01:intron 35.0%
CTTGTTTCCTTTCCAAACTA+TGG - Chr1:28537739-28537758 MsG0180001873.01.T01:intron 35.0%
CTTTGAATTCTTGTTCTTCG+TGG + Chr1:28544750-28544769 None:intergenic 35.0%
GAACATCTACTCAAATTGGT+TGG - Chr1:28541409-28541428 MsG0180001873.01.T01:intron 35.0%
GAAGAAACACACGTAAATTC+CGG + Chr1:28542581-28542600 None:intergenic 35.0%
GACAAAAGTTAAATCCCCTA+GGG - Chr1:28547065-28547084 MsG0180001873.01.T01:intron 35.0%
GACTATACAGAGGAATGAAA+AGG + Chr1:28549204-28549223 None:intergenic 35.0%
GAGACTTCTATGAAACTCTT+GGG - Chr1:28538595-28538614 MsG0180001873.01.T01:intron 35.0%
GAGATTGCATCCAAAATTCA+AGG - Chr1:28542370-28542389 MsG0180001873.01.T01:intron 35.0%
GAGCATGCCAAAAGAAAATA+TGG - Chr1:28538849-28538868 MsG0180001873.01.T01:intron 35.0%
GAGTTCTATTTACCACACAA+AGG - Chr1:28547185-28547204 MsG0180001873.01.T01:CDS 35.0%
GATAAAGATCTTCAGCTCTT+TGG + Chr1:28549787-28549806 None:intergenic 35.0%
GATTGACGAAGTAATATCTC+TGG - Chr1:28545301-28545320 MsG0180001873.01.T01:intron 35.0%
GCATAACCATTAACCAATCA+GGG + Chr1:28538786-28538805 None:intergenic 35.0%
GCATTAGTGGTCAAATTTCT+TGG - Chr1:28546459-28546478 MsG0180001873.01.T01:intron 35.0%
GCCCTTAAATTCATCTATAG+TGG - Chr1:28547904-28547923 MsG0180001873.01.T01:intron 35.0%
GCTTTAACCTTTCACTTGAA+GGG + Chr1:28544480-28544499 None:intergenic 35.0%
GGATAAGATATTTCTCCCTT+AGG + Chr1:28545644-28545663 None:intergenic 35.0%
GGCTTAGATTAGGAGAAAAA+GGG + Chr1:28540143-28540162 None:intergenic 35.0%
GGTGGTAAATCAAGTTTACT+CGG - Chr1:28547721-28547740 MsG0180001873.01.T01:intron 35.0%
GTAATGCAATAAGAGGAACA+AGG + Chr1:28542210-28542229 None:intergenic 35.0%
GTAGATGTTCCAAGAGTTAA+AGG + Chr1:28541399-28541418 None:intergenic 35.0%
GTATTTGAGTAGCGTATTTC+AGG - Chr1:28541080-28541099 MsG0180001873.01.T01:intron 35.0%
GTGTTTCTTAATTGGCACTA+GGG - Chr1:28550052-28550071 MsG0180001873.01.T01:intron 35.0%
GTTCTGTAGTTTAACTAGCT+TGG - Chr1:28540895-28540914 MsG0180001873.01.T01:intron 35.0%
GTTTACAATTGTGGTGTTTG+AGG - Chr1:28543923-28543942 MsG0180001873.01.T01:intron 35.0%
TAAAGACCGGAAAGTTTCAA+GGG - Chr1:28537530-28537549 MsG0180001873.01.T01:intron 35.0%
TAATTCACATAGATGCTGCT+TGG + Chr1:28550440-28550459 None:intergenic 35.0%
TACAACAAAACTACGCTTGT+AGG + Chr1:28548877-28548896 None:intergenic 35.0%
TACTTGGATATGTGGACTTA+TGG - Chr1:28547764-28547783 MsG0180001873.01.T01:intron 35.0%
TATACGAGGGTCATCAAAAT+GGG + Chr1:28540205-28540224 None:intergenic 35.0%
TCAGAATCTTAGGCAAACTT+TGG - Chr1:28539233-28539252 MsG0180001873.01.T01:intron 35.0%
TCCAACAACTAGGATAAACT+TGG + Chr1:28541863-28541882 None:intergenic 35.0%
TCCAATTGAAGTTTCACATG+AGG - Chr1:28549941-28549960 MsG0180001873.01.T01:intron 35.0%
TCCTCATGTGAAACTTCAAT+TGG + Chr1:28549945-28549964 None:intergenic 35.0%
TCCTTTCCAAATTGCAACAT+TGG + Chr1:28540252-28540271 None:intergenic 35.0%
TCTCCTCTAAGTCAAAGTAT+TGG + Chr1:28545041-28545060 None:intergenic 35.0%
TCTCCTCTCAAACACATTTA+TGG - Chr1:28541028-28541047 MsG0180001873.01.T01:intron 35.0%
TCTCTTCGGCTTATTCTTAA+TGG - Chr1:28537966-28537985 MsG0180001873.01.T01:intron 35.0%
TCTGATATGGTGATATCAGA+AGG + Chr1:28549167-28549186 None:intergenic 35.0%
TCTTCAGTCATTTCATTCCT+GGG - Chr1:28545179-28545198 MsG0180001873.01.T01:intron 35.0%
TGAGGTGAAGAATGAATATG+TGG + Chr1:28535761-28535780 None:intergenic 35.0%
TGGAATACCTTCTTTGTTGA+AGG - Chr1:28541516-28541535 MsG0180001873.01.T01:intron 35.0%
TGGTCACTTCATTTCTCTTT+AGG - Chr1:28539898-28539917 MsG0180001873.01.T01:intron 35.0%
TGTAGTGTCAAACACATACA+CGG - Chr1:28536329-28536348 MsG0180001873.01.T01:intron 35.0%
TTAAAGACCGGAAAGTTTCA+AGG - Chr1:28537529-28537548 MsG0180001873.01.T01:intron 35.0%
TTAGATTAGGAGAAAAAGGG+AGG + Chr1:28540140-28540159 None:intergenic 35.0%
TTAGTGCATGCTTAGATTGA+CGG + Chr1:28536757-28536776 None:intergenic 35.0%
TTAGTTGTGAGTCATACCAA+TGG + Chr1:28544887-28544906 None:intergenic 35.0%
TTATCCTAGTTGTTGGATGT+GGG - Chr1:28541866-28541885 MsG0180001873.01.T01:intron 35.0%
TTCATGTTAGCCATTTACAC+CGG - Chr1:28538132-28538151 MsG0180001873.01.T01:intron 35.0%
TTCCTGGAACTAGGAAATAA+AGG + Chr1:28550831-28550850 None:intergenic 35.0%
TTGACCAAAGATCAGAAACA+GGG + Chr1:28541190-28541209 None:intergenic 35.0%
TTGGATGCAATCTCATAAGA+AGG + Chr1:28542364-28542383 None:intergenic 35.0%
TTTAATTAGGATTAGGAGCC+TGG + Chr1:28544321-28544340 None:intergenic 35.0%
TTTATCCTAGTTGTTGGATG+TGG - Chr1:28541865-28541884 MsG0180001873.01.T01:intron 35.0%
TTTGTCTTGACAGTGTATTG+TGG - Chr1:28539474-28539493 MsG0180001873.01.T01:intron 35.0%
! AGCTGGACCATATTTTCTTT+TGG + Chr1:28538859-28538878 None:intergenic 35.0%
! AGCTTTTCATCTGATGATAC+AGG - Chr1:28547241-28547260 MsG0180001873.01.T01:intron 35.0%
! ATAAAGGCATAAGAAGATGC+AGG + Chr1:28546987-28547006 None:intergenic 35.0%
! ATGCTTTTGTAGGCTACTAT+GGG - Chr1:28536901-28536920 MsG0180001873.01.T01:three_prime_UTR 35.0%
! ATTTTGCGGATAACATGCAA+TGG - Chr1:28546107-28546126 MsG0180001873.01.T01:intron 35.0%
! CAAAGGATCAATAGTTTGCA+TGG - Chr1:28547202-28547221 MsG0180001873.01.T01:CDS 35.0%
! CACAAGACTTTCACCAATTT+TGG - Chr1:28548518-28548537 MsG0180001873.01.T01:intron 35.0%
! CATATGTTAGTGTTGGACAT+TGG - Chr1:28536637-28536656 MsG0180001873.01.T01:intron 35.0%
! CTCTGAATGATTGATTTCCT+GGG - Chr1:28540989-28541008 MsG0180001873.01.T01:intron 35.0%
! CTTCCAATACTTTGACTTAG+AGG - Chr1:28545035-28545054 MsG0180001873.01.T01:intron 35.0%
! CTTCTGAAGATATGTCTTCA+TGG + Chr1:28540584-28540603 None:intergenic 35.0%
! GATTCTAAAGGTAGAAAGGT+AGG - Chr1:28545765-28545784 MsG0180001873.01.T01:CDS 35.0%
! GCTATCCTGATGAATTTTTG+AGG - Chr1:28545359-28545378 MsG0180001873.01.T01:intron 35.0%
! GCTTTTCATCTGATGATACA+GGG - Chr1:28547242-28547261 MsG0180001873.01.T01:intron 35.0%
! GGCAGATAAAATTTTTACCC+AGG + Chr1:28545199-28545218 None:intergenic 35.0%
! GTTTTTATTGCCTGTTCTAG+AGG + Chr1:28550330-28550349 None:intergenic 35.0%
! TAAAGTCCAGCATTTTACAG+CGG + Chr1:28548463-28548482 None:intergenic 35.0%
! TATGCTTTTGTAGGCTACTA+TGG - Chr1:28536900-28536919 MsG0180001873.01.T01:three_prime_UTR 35.0%
! TCAGTGACCTGAAGATTTTT+GGG + Chr1:28545566-28545585 None:intergenic 35.0%
! TCTCTGAATGATTGATTTCC+TGG - Chr1:28540988-28541007 MsG0180001873.01.T01:intron 35.0%
! TCTTTCTTAACATCGGTTAC+AGG - Chr1:28549424-28549443 MsG0180001873.01.T01:five_prime_UTR 35.0%
! TGATTGATTTCATGCTGTGA+TGG - Chr1:28550729-28550748 MsG0180001873.01.T01:intron 35.0%
! TGATTTTCGCCTAACATCTA+TGG - Chr1:28546153-28546172 MsG0180001873.01.T01:intron 35.0%
! TTCAGTGACCTGAAGATTTT+TGG + Chr1:28545567-28545586 None:intergenic 35.0%
! TTCCTTTATTTCCTAGTTCC+AGG - Chr1:28550826-28550845 MsG0180001873.01.T01:intron 35.0%
! TTGTTATTAGGTGTCCAACA+AGG + Chr1:28550379-28550398 None:intergenic 35.0%
! TTTGTCAGTAGTGCTGAATT+TGG - Chr1:28547131-28547150 MsG0180001873.01.T01:intron 35.0%
!! AATCCTAGATTAGTTTGACC+TGG + Chr1:28544983-28545002 None:intergenic 35.0%
!! ACAGTGTTTTTGATGTTCAG+TGG + Chr1:28549635-28549654 None:intergenic 35.0%
!! AGACATTGACTTCAAAACCT+TGG - Chr1:28543676-28543695 MsG0180001873.01.T01:intron 35.0%
!! AGCTACAGCAATTTTGACAA+AGG + Chr1:28536709-28536728 None:intergenic 35.0%
!! AGTAGTGCTGAATTTGGTTT+TGG - Chr1:28547137-28547156 MsG0180001873.01.T01:intron 35.0%
!! ATTCCACTGTGTTTTGAACT+GGG - Chr1:28546614-28546633 MsG0180001873.01.T01:intron 35.0%
!! CATGTGTTTATAAGTGTTGG+AGG - Chr1:28548842-28548861 MsG0180001873.01.T01:intron 35.0%
!! CTTAACTTGCAAACAGCTAT+AGG + Chr1:28545505-28545524 None:intergenic 35.0%
!! GATCCTTTGTTTCTGTTAGA+TGG - Chr1:28537315-28537334 MsG0180001873.01.T01:CDS 35.0%
!! GGATTTAACTTTTGTCTCCT+AGG + Chr1:28547061-28547080 None:intergenic 35.0%
!! GGCTTTATTTGGTCGATATA+TGG + Chr1:28548017-28548036 None:intergenic 35.0%
!! GTGGAAGTATGATTGATTTG+TGG + Chr1:28546521-28546540 None:intergenic 35.0%
!! GTTTAATTTGTTCCTCTCCA+GGG + Chr1:28545728-28545747 None:intergenic 35.0%
!! GTTTTAGGCCTCCAAAAAAT+TGG + Chr1:28537023-28537042 None:intergenic 35.0%
!! TATTCCACTGTGTTTTGAAC+TGG - Chr1:28546613-28546632 MsG0180001873.01.T01:intron 35.0%
!! TCACTTTGGAACATAGGTAA+AGG - Chr1:28541307-28541326 MsG0180001873.01.T01:CDS 35.0%
!! TCATTTTGTTTGCGTCATGT+CGG + Chr1:28536599-28536618 None:intergenic 35.0%
!! TGTTTAATTTGTTCCTCTCC+AGG + Chr1:28545729-28545748 None:intergenic 35.0%
!! TTAGGCTTTGTTTGGAAGAT+AGG - Chr1:28539916-28539935 MsG0180001873.01.T01:intron 35.0%
!! TTGTTTCTGTTAGATGGCAT+GGG - Chr1:28537321-28537340 MsG0180001873.01.T01:CDS 35.0%
!! TTTAATTTGTTCCTCTCCAG+GGG + Chr1:28545727-28545746 None:intergenic 35.0%
!! TTTGGTTCTCAGGTATGTTA+GGG - Chr1:28542321-28542340 MsG0180001873.01.T01:intron 35.0%
!! TTTGTTTCTGTTAGATGGCA+TGG - Chr1:28537320-28537339 MsG0180001873.01.T01:CDS 35.0%
!! TTTTTGTTTGTGCAGTCTGA+AGG - Chr1:28538248-28538267 MsG0180001873.01.T01:intron 35.0%
!!! ACAAGCGTAGTTTTGTTGTA+AGG - Chr1:28548877-28548896 MsG0180001873.01.T01:intron 35.0%
!!! GTTGCTTCTGCTTTATTTTG+CGG - Chr1:28546093-28546112 MsG0180001873.01.T01:intron 35.0%
AAACTGGTAGGTACCAGAAT+TGG - Chr1:28550346-28550365 MsG0180001873.01.T01:intron 40.0%
AAAGACCGGAAAGTTTCAAG+GGG - Chr1:28537531-28537550 MsG0180001873.01.T01:intron 40.0%
AAATGACAGGCAACAGAAGA+AGG + Chr1:28539356-28539375 None:intergenic 40.0%
AAATGATGTGCTTACTTCCG+TGG - Chr1:28545424-28545443 MsG0180001873.01.T01:intron 40.0%
AACAATGCCCTTCAAGTGAA+AGG - Chr1:28544470-28544489 MsG0180001873.01.T01:intron 40.0%
ACAGAACTGTGTACTCTCTA+AGG + Chr1:28540882-28540901 None:intergenic 40.0%
ACATTGTTCATAGACGGAAG+AGG - Chr1:28548597-28548616 MsG0180001873.01.T01:intron 40.0%
ACGATAGCCAAGAAAATGGT+TGG + Chr1:28537161-28537180 None:intergenic 40.0%
ACGTACGATAGCCAAGAAAA+TGG + Chr1:28537165-28537184 None:intergenic 40.0%
ACTACTTCAACTGTGACCAT+TGG + Chr1:28547016-28547035 None:intergenic 40.0%
ACTTGAATGGATGTCCAACA+GGG - Chr1:28542994-28543013 MsG0180001873.01.T01:intron 40.0%
ACTTTGCATGACTCTGTTTG+TGG - Chr1:28548315-28548334 MsG0180001873.01.T01:CDS 40.0%
AGAAAAAAGGGATGGAGGAA+GGG + Chr1:28540106-28540125 None:intergenic 40.0%
AGAATTCCGGAAGAGAGAAA+GGG + Chr1:28535859-28535878 None:intergenic 40.0%
AGCTCTATGTCTTGATCATG+AGG - Chr1:28541330-28541349 MsG0180001873.01.T01:CDS 40.0%
AGCTCTATTAGACACTAAGC+TGG + Chr1:28548295-28548314 None:intergenic 40.0%
AGGAAAGGCAAACATATGAG+CGG + Chr1:28550610-28550629 None:intergenic 40.0%
AGGAATTTCTCATTCGGCAA+GGG - Chr1:28540531-28540550 MsG0180001873.01.T01:intron 40.0%
AGTCAAATTGCATTGCGTGT+TGG - Chr1:28543867-28543886 MsG0180001873.01.T01:intron 40.0%
ATAACAGAACAAGACCAGTG+CGG + Chr1:28540392-28540411 None:intergenic 40.0%
ATACGAGGGTCATCAAAATG+GGG + Chr1:28540204-28540223 None:intergenic 40.0%
ATAGAGGGATTAGAGCTCTT+GGG - Chr1:28540318-28540337 MsG0180001873.01.T01:intron 40.0%
ATATGCGGGTTTAAATCCCT+TGG - Chr1:28538641-28538660 MsG0180001873.01.T01:intron 40.0%
ATATGGTGATATCAGAAGGG+AGG + Chr1:28549163-28549182 None:intergenic 40.0%
ATCACCATATCAGAAACAGC+AGG - Chr1:28549173-28549192 MsG0180001873.01.T01:exon 40.0%
ATCTGATACTCTGAGCTTCT+TGG + Chr1:28537571-28537590 None:intergenic 40.0%
ATGAGAGTTTGGTTAGGCAT+TGG - Chr1:28538419-28538438 MsG0180001873.01.T01:intron 40.0%
ATGATCTAAAAGAGAGAGGG+AGG + Chr1:28539591-28539610 None:intergenic 40.0%
ATTCATCAGGATAGCAGAGA+AGG + Chr1:28545354-28545373 None:intergenic 40.0%
ATTCTGCTGATGTGAGATTG+GGG - Chr1:28539030-28539049 MsG0180001873.01.T01:intron 40.0%
ATTGCAACATTGGCATGTCA+TGG + Chr1:28540242-28540261 None:intergenic 40.0%
CAAAATTGCTGTAGCTCACT+GGG - Chr1:28536713-28536732 MsG0180001873.01.T01:intron 40.0%
CAACAACCACCCTTTAACAT+AGG + Chr1:28550226-28550245 None:intergenic 40.0%
CACACCATTTGATGAGAGTT+TGG - Chr1:28538408-28538427 MsG0180001873.01.T01:intron 40.0%
CACTTACCTATGTTAAAGGG+TGG - Chr1:28550217-28550236 MsG0180001873.01.T01:intron 40.0%
CAGAACTGTGTACTCTCTAA+GGG + Chr1:28540881-28540900 None:intergenic 40.0%
CAGTATTCTCCAATTGACAG+CGG - Chr1:28539558-28539577 MsG0180001873.01.T01:intron 40.0%
CAGTGTAACATGCTCAATTC+CGG - Chr1:28542559-28542578 MsG0180001873.01.T01:intron 40.0%
CATCCATTCAAGTCATGTAG+AGG + Chr1:28542987-28543006 None:intergenic 40.0%
CATGACTTTGAGCTCATTCT+AGG - Chr1:28537097-28537116 MsG0180001873.01.T01:CDS 40.0%
CATTCTGCTGATGTGAGATT+GGG - Chr1:28539029-28539048 MsG0180001873.01.T01:intron 40.0%
CATTGATGTCTTGCAGTGAA+GGG - Chr1:28546716-28546735 MsG0180001873.01.T01:intron 40.0%
CCAGATAAGAAACTCTACGT+AGG - Chr1:28550128-28550147 MsG0180001873.01.T01:intron 40.0%
CCTACGTAGAGTTTCTTATC+TGG + Chr1:28550131-28550150 None:intergenic 40.0%
CGCTTTAACCTTTCACTTGA+AGG + Chr1:28544481-28544500 None:intergenic 40.0%
CGTACATCGCAGGAATAAAA+CGG + Chr1:28546934-28546953 None:intergenic 40.0%
CTATACGAGGGTCATCAAAA+TGG + Chr1:28540206-28540225 None:intergenic 40.0%
CTATGTTAAAGGGTGGTTGT+TGG - Chr1:28550224-28550243 MsG0180001873.01.T01:intron 40.0%
CTGCAGAAAACTATGCAAAC+AGG - Chr1:28549836-28549855 MsG0180001873.01.T01:intron 40.0%
CTTGACCAAAGATCAGAAAC+AGG + Chr1:28541191-28541210 None:intergenic 40.0%
CTTGATTTACCACCACCATT+TGG + Chr1:28547715-28547734 None:intergenic 40.0%
CTTTGTCAAACTGTTGTTGC+AGG - Chr1:28547565-28547584 MsG0180001873.01.T01:intron 40.0%
GAAATATCTTATCCGGGAAC+AGG - Chr1:28545650-28545669 MsG0180001873.01.T01:intron 40.0%
GAACCAGGTCAAACTAATCT+AGG - Chr1:28544977-28544996 MsG0180001873.01.T01:intron 40.0%
GACATGCCAATGTTGCAATT+TGG - Chr1:28540243-28540262 MsG0180001873.01.T01:intron 40.0%
GACGAAGTAATATCTCTGGA+TGG - Chr1:28545305-28545324 MsG0180001873.01.T01:intron 40.0%
GAGAAGGCTTGGAGAAAAAA+GGG + Chr1:28540118-28540137 None:intergenic 40.0%
GAGATAGTAGAAGTCACCAT+TGG - Chr1:28544868-28544887 MsG0180001873.01.T01:intron 40.0%
GAGGACTTGAATTTAGCAGT+AGG - Chr1:28545458-28545477 MsG0180001873.01.T01:intron 40.0%
GATATGTCTTCATGGTCTCT+AGG + Chr1:28540576-28540595 None:intergenic 40.0%
GATCTTCTCACATATTGTGG+TGG - Chr1:28537609-28537628 MsG0180001873.01.T01:intron 40.0%
GATGCAATCTCATAAGAAGG+AGG + Chr1:28542361-28542380 None:intergenic 40.0%
GATGCTTCCGTTGAATATCT+AGG - Chr1:28546868-28546887 MsG0180001873.01.T01:intron 40.0%
GATTCAAACCCCTAAAATCG+TGG + Chr1:28536976-28536995 None:intergenic 40.0%
GATTGTCTCTTAGAGATCAG+TGG + Chr1:28544389-28544408 None:intergenic 40.0%
GCCAATGTTGCAATTTGGAA+AGG - Chr1:28540248-28540267 MsG0180001873.01.T01:intron 40.0%
GCTCTTTGGATAACAATCTC+AGG + Chr1:28549773-28549792 None:intergenic 40.0%
GGAGACTTCTATGAAACTCT+TGG - Chr1:28538594-28538613 MsG0180001873.01.T01:intron 40.0%
GGGAAATTGAATCACGACAT+AGG - Chr1:28546821-28546840 MsG0180001873.01.T01:intron 40.0%
GGTGTAAATGGCTAACATGA+AGG + Chr1:28538133-28538152 None:intergenic 40.0%
GTACCATGAAGCAAATGTCA+AGG - Chr1:28545936-28545955 MsG0180001873.01.T01:intron 40.0%
GTACCTCTACATGACTTGAA+TGG - Chr1:28542981-28543000 MsG0180001873.01.T01:intron 40.0%
GTAGGAGAACGTTAACAAAG+AGG - Chr1:28540035-28540054 MsG0180001873.01.T01:intron 40.0%
GTAGTGTCAAACACATACAC+GGG - Chr1:28536330-28536349 MsG0180001873.01.T01:intron 40.0%
GTAGTTCCAGACATTCTGAA+TGG - Chr1:28541153-28541172 MsG0180001873.01.T01:intron 40.0%
GTCAAGGTGTGATTCTAAAC+AGG - Chr1:28541205-28541224 MsG0180001873.01.T01:intron 40.0%
GTGACTTGATATGTAGCACA+TGG - Chr1:28540761-28540780 MsG0180001873.01.T01:intron 40.0%
GTTTGGAAGATAGGAGAGAA+GGG - Chr1:28539925-28539944 MsG0180001873.01.T01:intron 40.0%
TAAAGGTAGAAAGGTAGGTG+AGG - Chr1:28545770-28545789 MsG0180001873.01.T01:CDS 40.0%
TAACCGTGTCTTCGGAAATA+GGG - Chr1:28541368-28541387 MsG0180001873.01.T01:intron 40.0%
TAAGAAACTCTACGTAGGAG+AGG - Chr1:28550133-28550152 MsG0180001873.01.T01:intron 40.0%
TAAGCTACTTGAATGGAAGG+AGG - Chr1:28543529-28543548 MsG0180001873.01.T01:intron 40.0%
TACAATACATTTCTCCGCAC+TGG - Chr1:28540375-28540394 MsG0180001873.01.T01:intron 40.0%
TACACGCAATGGTTATTCAG+TGG - Chr1:28539263-28539282 MsG0180001873.01.T01:intron 40.0%
TACGTGTGTTTCTTCAGCAA+AGG - Chr1:28542586-28542605 MsG0180001873.01.T01:intron 40.0%
TAGCAGAGTTTCTATTTGGC+AGG + Chr1:28550863-28550882 None:intergenic 40.0%
TAGGAATTTCTCATTCGGCA+AGG - Chr1:28540530-28540549 MsG0180001873.01.T01:intron 40.0%
TAGTAGAATCCAGAAGCTTG+AGG - Chr1:28546767-28546786 MsG0180001873.01.T01:intron 40.0%
TATAGACTACCTCAAGCTTC+TGG + Chr1:28546779-28546798 None:intergenic 40.0%
TATAGAGGGATTAGAGCTCT+TGG - Chr1:28540317-28540336 MsG0180001873.01.T01:intron 40.0%
TATTTCAGGAACGTCCAAGT+GGG - Chr1:28541094-28541113 MsG0180001873.01.T01:intron 40.0%
TCAAAATTGCTGTAGCTCAC+TGG - Chr1:28536712-28536731 MsG0180001873.01.T01:intron 40.0%
TCACAGAGCATATAACGCTT+TGG + Chr1:28546055-28546074 None:intergenic 40.0%
TCACCATATCAGAAACAGCA+GGG - Chr1:28549174-28549193 MsG0180001873.01.T01:exon 40.0%
TCATTCTGCTGATGTGAGAT+TGG - Chr1:28539028-28539047 MsG0180001873.01.T01:intron 40.0%
TCATTGATGTCTTGCAGTGA+AGG - Chr1:28546715-28546734 MsG0180001873.01.T01:intron 40.0%
TCGACAAATGCACATCTAAG+CGG + Chr1:28543769-28543788 None:intergenic 40.0%
TCTCAACTTAGAGCTCCTAA+GGG - Chr1:28545626-28545645 MsG0180001873.01.T01:intron 40.0%
TCTCTCATCTCACTTCTTTG+TGG - Chr1:28535974-28535993 MsG0180001873.01.T01:three_prime_UTR 40.0%
TCTTAATTGGCACTAGGGAA+TGG - Chr1:28550057-28550076 MsG0180001873.01.T01:intron 40.0%
TCTTGAGGAGGAAATTCTTG+TGG - Chr1:28540673-28540692 MsG0180001873.01.T01:intron 40.0%
TCTTGATAGAAGTGGCTGTT+GGG - Chr1:28549573-28549592 MsG0180001873.01.T01:intron 40.0%
TGAACTGGGGTTGTAAATGT+TGG - Chr1:28546628-28546647 MsG0180001873.01.T01:intron 40.0%
TGAAGGGAGAAGAAGGAAAT+GGG - Chr1:28546732-28546751 MsG0180001873.01.T01:intron 40.0%
TGACATGTACCTACTAAGCT+AGG + Chr1:28543271-28543290 None:intergenic 40.0%
TGATAAGGGACTTTGGATAC+TGG + Chr1:28543826-28543845 None:intergenic 40.0%
TGCTAAGCTACTTGAATGGA+AGG - Chr1:28543526-28543545 MsG0180001873.01.T01:intron 40.0%
TGTATTGTGGAGGAAGTTCA+AGG - Chr1:28539487-28539506 MsG0180001873.01.T01:intron 40.0%
TGTGAAGTAGCGCTATTAGA+CGG + Chr1:28548344-28548363 None:intergenic 40.0%
TGTGATAGTATGTTTGGCCA+GGG + Chr1:28545007-28545026 None:intergenic 40.0%
TGTGATGTTATGTTTGGCCA+GGG + Chr1:28545090-28545109 None:intergenic 40.0%
TGTTGGAAAACTTATGCAGG+TGG + Chr1:28543040-28543059 None:intergenic 40.0%
TGTTTGGAAGATAGGAGAGA+AGG - Chr1:28539924-28539943 MsG0180001873.01.T01:intron 40.0%
TTAGCGCAACAGATCATTCT+TGG - Chr1:28551227-28551246 MsG0180001873.01.T01:five_prime_UTR 40.0%
TTCATACCTACTACAGGCAT+AGG + Chr1:28539792-28539811 None:intergenic 40.0%
TTCGTTTGTGTACTGTGTAG+AGG - Chr1:28536486-28536505 MsG0180001873.01.T01:intron 40.0%
TTCTCGAGCTAACCTTCTAT+TGG - Chr1:28538527-28538546 MsG0180001873.01.T01:intron 40.0%
TTGAGGATATGGAGTCTGTA+TGG - Chr1:28545376-28545395 MsG0180001873.01.T01:intron 40.0%
TTGCCTTGACATTTGCTTCA+TGG + Chr1:28545942-28545961 None:intergenic 40.0%
TTGGATGATCTTACACGCAA+TGG - Chr1:28539252-28539271 MsG0180001873.01.T01:intron 40.0%
TTGTACAGCAGACTATACAG+AGG + Chr1:28549214-28549233 None:intergenic 40.0%
TTTCCTTTCCAAACTATGGC+AGG - Chr1:28537743-28537762 MsG0180001873.01.T01:intron 40.0%
TTTCTGCATACATCTTGAGG+AGG - Chr1:28540661-28540680 MsG0180001873.01.T01:intron 40.0%
! AAACTAATCTAGGATTGCCC+TGG - Chr1:28544987-28545006 MsG0180001873.01.T01:intron 40.0%
! AAACTGTTGGAGAGACCTTT+TGG - Chr1:28536829-28536848 MsG0180001873.01.T01:three_prime_UTR 40.0%
! AAAGCGTTATATGCTCTGTG+AGG - Chr1:28546054-28546073 MsG0180001873.01.T01:intron 40.0%
! AACTTAATCTAGGATTGCCC+TGG - Chr1:28545070-28545089 MsG0180001873.01.T01:intron 40.0%
! ACAATTGTGGTGTTTGAGGT+AGG - Chr1:28543927-28543946 MsG0180001873.01.T01:intron 40.0%
! AGCTACGAACCACGATTTTA+GGG - Chr1:28536964-28536983 MsG0180001873.01.T01:three_prime_UTR 40.0%
! AGTTCATTTCAGGTCTGCTA+TGG - Chr1:28547871-28547890 MsG0180001873.01.T01:intron 40.0%
! ATGGAGGTGTATTGCATTAG+TGG - Chr1:28546446-28546465 MsG0180001873.01.T01:intron 40.0%
! ATTGGTAATCCACTGCAATG+TGG + Chr1:28541553-28541572 None:intergenic 40.0%
! ATTTTGCCGCTGTAAAATGC+TGG - Chr1:28548454-28548473 MsG0180001873.01.T01:intron 40.0%
! CAAGGCAAACACTAGAGTTT+TGG - Chr1:28545954-28545973 MsG0180001873.01.T01:intron 40.0%
! CATCTTGCGATTTTATCGGA+TGG + Chr1:28547598-28547617 None:intergenic 40.0%
! CTCTTAGAGATCAGTGGATT+AGG + Chr1:28544383-28544402 None:intergenic 40.0%
! CTGATGCGATCTTTTTCCTT+TGG + Chr1:28550016-28550035 None:intergenic 40.0%
! GAATTGGTTCAGTACCTTGT+TGG - Chr1:28550362-28550381 MsG0180001873.01.T01:intron 40.0%
! GAGAACAAGCTTGATAACCA+AGG + Chr1:28548734-28548753 None:intergenic 40.0%
! GCTTGTTGATGAAATATGCG+AGG - Chr1:28549502-28549521 MsG0180001873.01.T01:intron 40.0%
! GGTTAGCTCGAGAATTATCA+TGG + Chr1:28538521-28538540 None:intergenic 40.0%
! GTTATCAAGCTTGTTCTCGT+AGG - Chr1:28548736-28548755 MsG0180001873.01.T01:intron 40.0%
! GTTTTTGATGTTCAGTGGCA+AGG + Chr1:28549630-28549649 None:intergenic 40.0%
! TAGCTACGAACCACGATTTT+AGG - Chr1:28536963-28536982 MsG0180001873.01.T01:three_prime_UTR 40.0%
! TGCTTTTGTAGGCTACTATG+GGG - Chr1:28536902-28536921 MsG0180001873.01.T01:three_prime_UTR 40.0%
! TGTTACGTTTTGTGCACCAA+AGG - Chr1:28539120-28539139 MsG0180001873.01.T01:intron 40.0%
! TTAGTGCCCTGATTGGTTAA+TGG - Chr1:28538777-28538796 MsG0180001873.01.T01:intron 40.0%
! TTCTCACATATTGTGGTGGA+AGG - Chr1:28537613-28537632 MsG0180001873.01.T01:intron 40.0%
! TTCTTAACATCGGTTACAGG+TGG - Chr1:28549427-28549446 MsG0180001873.01.T01:five_prime_UTR 40.0%
!! AAAGAAGGTATTCCATCCGT+CGG + Chr1:28541511-28541530 None:intergenic 40.0%
!! AAGGGGGTACTGCATAAATA+TGG - Chr1:28540549-28540568 MsG0180001873.01.T01:intron 40.0%
!! ACAAGGTACTGAACCAATTC+TGG + Chr1:28550362-28550381 None:intergenic 40.0%
!! ACTTGGTTCTGCCAGAATTA+AGG + Chr1:28541846-28541865 None:intergenic 40.0%
!! AGCAATGATGGATCGAAGTT+CGG + Chr1:28549459-28549478 None:intergenic 40.0%
!! ATCAGAAGTGTCAGTGCTAT+AGG - Chr1:28536670-28536689 MsG0180001873.01.T01:intron 40.0%
!! CTGTTTCTGATCTTTGGTCA+AGG - Chr1:28541189-28541208 MsG0180001873.01.T01:intron 40.0%
!! CTTGGTTCTGCCAGAATTAA+GGG + Chr1:28541845-28541864 None:intergenic 40.0%
!! CTTTGGTTCTCAGGTATGTT+AGG - Chr1:28542320-28542339 MsG0180001873.01.T01:intron 40.0%
!! GTCTGTTTACTTTGGTTCTC+AGG - Chr1:28542311-28542330 MsG0180001873.01.T01:intron 40.0%
!! TATCCCTGCTGTTTCTGATA+TGG + Chr1:28549180-28549199 None:intergenic 40.0%
!! TTCCACTGTGTTTTGAACTG+GGG - Chr1:28546615-28546634 MsG0180001873.01.T01:intron 40.0%
!!! AGGGTTTTGGAGAGTTTTGT+AGG + Chr1:28540087-28540106 None:intergenic 40.0%
!!! AGTGCTGAATTTGGTTTTGG+AGG - Chr1:28547140-28547159 MsG0180001873.01.T01:intron 40.0%
!!! GATGGTAAGCATCGGAATTT+TGG - Chr1:28550927-28550946 MsG0180001873.01.T01:intron 40.0%
!!! GGGTTTTGGAGAGTTTTGTA+GGG + Chr1:28540086-28540105 None:intergenic 40.0%
!!! TGCTTTTGAAACTGCCAAGA+GGG - Chr1:28549739-28549758 MsG0180001873.01.T01:intron 40.0%
!!! TTGCTTTTGAAACTGCCAAG+AGG - Chr1:28549738-28549757 MsG0180001873.01.T01:intron 40.0%
AACCCCAGTTCAAAACACAG+TGG + Chr1:28546620-28546639 None:intergenic 45.0%
AAGACCGGAAAGTTTCAAGG+GGG - Chr1:28537532-28537551 MsG0180001873.01.T01:intron 45.0%
AAGGAGGAGAAGGAGAATTC+CGG + Chr1:28535872-28535891 None:intergenic 45.0%
AAGTGCCTGCTATGTAACCT+AGG - Chr1:28547041-28547060 MsG0180001873.01.T01:intron 45.0%
AAGTTAAATCCCCTAGGGGA+CGG - Chr1:28547070-28547089 MsG0180001873.01.T01:intron 45.0%
AATTATCCGTAGCGTTTCCC+AGG + Chr1:28541009-28541028 None:intergenic 45.0%
ACATAAGCAGACCTCCACAA+GGG + Chr1:28542963-28542982 None:intergenic 45.0%
ACATGCATAACTCTTGCCCA+AGG + Chr1:28537066-28537085 None:intergenic 45.0%
ACTACTTGGATGCTGCAAGA+TGG - Chr1:28549698-28549717 MsG0180001873.01.T01:intron 45.0%
ACTCCTGCCATAGTTTGGAA+AGG + Chr1:28537749-28537768 None:intergenic 45.0%
ACTTGCAAACAGCTATAGGC+AGG + Chr1:28545501-28545520 None:intergenic 45.0%
AGATTGAACTTCGGAGAACC+AGG - Chr1:28544962-28544981 MsG0180001873.01.T01:intron 45.0%
AGCTACAAGCCCACAACTTA+TGG - Chr1:28538068-28538087 MsG0180001873.01.T01:intron 45.0%
AGCTAGAGCCAAATTACAGC+TGG - Chr1:28544926-28544945 MsG0180001873.01.T01:intron 45.0%
AGGCCTCCAAAAAATTGGGT+TGG + Chr1:28537018-28537037 None:intergenic 45.0%
AGGCTTGGAGAAAAAAGGGA+TGG + Chr1:28540114-28540133 None:intergenic 45.0%
AGGGCTCAACCTTTAACTCT+TGG - Chr1:28541387-28541406 MsG0180001873.01.T01:intron 45.0%
AGTATACCTGAGGAAACGAG+AGG + Chr1:28535907-28535926 None:intergenic 45.0%
ATAGACGGAAGAGGCAAATG+TGG - Chr1:28548606-28548625 MsG0180001873.01.T01:intron 45.0%
ATCAACCAACTTCCGAATCG+AGG - Chr1:28550883-28550902 MsG0180001873.01.T01:intron 45.0%
ATCCTGAGACAGCAGATGTT+TGG - Chr1:28543987-28544006 MsG0180001873.01.T01:intron 45.0%
ATCTGGATTTCCTGCATCTC+AGG - Chr1:28541478-28541497 MsG0180001873.01.T01:intron 45.0%
ATGAAGGAAGAAGGAGGAGA+AGG + Chr1:28535882-28535901 None:intergenic 45.0%
ATGACAGACGGATAATCTCG+AGG - Chr1:28550756-28550775 MsG0180001873.01.T01:intron 45.0%
ATGAGGGCTGACATTATGTG+AGG - Chr1:28547388-28547407 MsG0180001873.01.T01:intron 45.0%
ATGCAGTTACGCGTAAACGT+TGG + Chr1:28550958-28550977 None:intergenic 45.0%
ATGGGCACAACTTGCATTGA+TGG - Chr1:28549665-28549684 MsG0180001873.01.T01:intron 45.0%
ATGGTTTACCACTACGAAGG+TGG - Chr1:28545794-28545813 MsG0180001873.01.T01:CDS 45.0%
CAAAACTACGCTTGTAGGTG+AGG + Chr1:28548872-28548891 None:intergenic 45.0%
CACGTCAAGTTTACTCTGCA+GGG - Chr1:28538316-28538335 MsG0180001873.01.T01:intron 45.0%
CCAGGAAACCCCTATGTATA+TGG - Chr1:28539729-28539748 MsG0180001873.01.T01:intron 45.0%
CCATATACATAGGGGTTTCC+TGG + Chr1:28539732-28539751 None:intergenic 45.0%
CCATCAAACAGAGGAGACAA+GGG + Chr1:28538192-28538211 None:intergenic 45.0%
CTCAGCTTTCTGTCCTATAG+AGG + Chr1:28550417-28550436 None:intergenic 45.0%
CTCTTGATAGAAGTGGCTGT+TGG - Chr1:28549572-28549591 MsG0180001873.01.T01:intron 45.0%
CTGTGATAGTATGTTTGGCC+AGG + Chr1:28545008-28545027 None:intergenic 45.0%
CTGTGATGTTATGTTTGGCC+AGG + Chr1:28545091-28545110 None:intergenic 45.0%
CTTGAAGAGCCTATAGTCAC+CGG + Chr1:28550089-28550108 None:intergenic 45.0%
CTTGATAGAAGTGGCTGTTG+GGG - Chr1:28549574-28549593 MsG0180001873.01.T01:intron 45.0%
CTTGGAGAAAAAAGGGATGG+AGG + Chr1:28540111-28540130 None:intergenic 45.0%
CTTTGGTATCACGAGCAATG+TGG + Chr1:28546038-28546057 None:intergenic 45.0%
GAACTTCGATCCATCATTGC+TGG - Chr1:28549458-28549477 MsG0180001873.01.T01:intron 45.0%
GAATTTCTCATTCGGCAAGG+GGG - Chr1:28540533-28540552 MsG0180001873.01.T01:intron 45.0%
GACTTGAATGGATGTCCAAC+AGG - Chr1:28542993-28543012 MsG0180001873.01.T01:intron 45.0%
GAGAAAAAAGGGATGGAGGA+AGG + Chr1:28540107-28540126 None:intergenic 45.0%
GAGAATTCCGGAAGAGAGAA+AGG + Chr1:28535860-28535879 None:intergenic 45.0%
GAGGAACAGAGACTGCAAAA+GGG - Chr1:28549521-28549540 MsG0180001873.01.T01:intron 45.0%
GAGTTTCTATTTGGCAGGCT+AGG + Chr1:28550858-28550877 None:intergenic 45.0%
GATGACTGCTACATAAGCAC+AGG + Chr1:28542880-28542899 None:intergenic 45.0%
GCGCATTTGTCCATTCATGA+AGG - Chr1:28542937-28542956 MsG0180001873.01.T01:intron 45.0%
GCTAGAGCCAAATTACAGCT+GGG - Chr1:28544927-28544946 MsG0180001873.01.T01:intron 45.0%
GCTGACACTACTTGGATATG+TGG - Chr1:28547756-28547775 MsG0180001873.01.T01:intron 45.0%
GCTTAACAGAAGCCTCGATT+CGG + Chr1:28550898-28550917 None:intergenic 45.0%
GCTTAGATTGACGGTGAGTT+TGG + Chr1:28536748-28536767 None:intergenic 45.0%
GGAACAATAGCCGGTGTAAA+TGG + Chr1:28538145-28538164 None:intergenic 45.0%
GGAATGGTTTACCACTACGA+AGG - Chr1:28545791-28545810 MsG0180001873.01.T01:CDS 45.0%
GGAATTTCTCATTCGGCAAG+GGG - Chr1:28540532-28540551 MsG0180001873.01.T01:intron 45.0%
GGAGAAGGCTTGGAGAAAAA+AGG + Chr1:28540119-28540138 None:intergenic 45.0%
GGATATGGAGTCTGTATGGA+AGG - Chr1:28545380-28545399 MsG0180001873.01.T01:intron 45.0%
GTAACCGTGTCTTCGGAAAT+AGG - Chr1:28541367-28541386 MsG0180001873.01.T01:CDS 45.0%
GTAGAAAGGTAGGTGAGGAA+TGG - Chr1:28545775-28545794 MsG0180001873.01.T01:CDS 45.0%
GTATACCTGAGGAAACGAGA+GGG + Chr1:28535906-28535925 None:intergenic 45.0%
GTATTTCAGGAACGTCCAAG+TGG - Chr1:28541093-28541112 MsG0180001873.01.T01:intron 45.0%
GTCAAAATAGGGAATCACGG+CGG + Chr1:28547802-28547821 None:intergenic 45.0%
GTCAAACTGTTGTTGCAGGA+GGG - Chr1:28547569-28547588 MsG0180001873.01.T01:intron 45.0%
GTCCTTAACAGTCCCACATT+GGG - Chr1:28548803-28548822 MsG0180001873.01.T01:intron 45.0%
GTCTCAACTTAGAGCTCCTA+AGG - Chr1:28545625-28545644 MsG0180001873.01.T01:intron 45.0%
GTCTTGACAGTGTATTGTGG+AGG - Chr1:28539477-28539496 MsG0180001873.01.T01:intron 45.0%
GTGAAGGGAGAAGAAGGAAA+TGG - Chr1:28546731-28546750 MsG0180001873.01.T01:intron 45.0%
GTGCACATCGATCGAAAGAA+GGG - Chr1:28550788-28550807 MsG0180001873.01.T01:intron 45.0%
GTTACATAGCAGGCACTTCA+TGG + Chr1:28547039-28547058 None:intergenic 45.0%
GTTAGGGAGGGAAAGGAATA+GGG - Chr1:28539967-28539986 MsG0180001873.01.T01:intron 45.0%
TACACCCACATCCAACAACT+AGG + Chr1:28541873-28541892 None:intergenic 45.0%
TACATAAGCAGACCTCCACA+AGG + Chr1:28542964-28542983 None:intergenic 45.0%
TAGACGGAAGAGGCAAATGT+GGG - Chr1:28548607-28548626 MsG0180001873.01.T01:intron 45.0%
TAGGAGAAAAAGGGAGGAGA+AGG + Chr1:28540134-28540153 None:intergenic 45.0%
TATATCTCGTCGTACATCGC+AGG + Chr1:28546944-28546963 None:intergenic 45.0%
TCACATAATGTCAGCCCTCA+TGG + Chr1:28547389-28547408 None:intergenic 45.0%
TCATTGCTGGAACCACCAAA+AGG - Chr1:28549471-28549490 MsG0180001873.01.T01:intron 45.0%
TCCATCAAACAGAGGAGACA+AGG + Chr1:28538193-28538212 None:intergenic 45.0%
TCCTCTCACCTAAAGCCAAA+AGG + Chr1:28536847-28536866 None:intergenic 45.0%
TCGTAACGTAACCGTGTCTT+CGG - Chr1:28541360-28541379 MsG0180001873.01.T01:CDS 45.0%
TCTATGACAGGACCAAATGG+TGG - Chr1:28547700-28547719 MsG0180001873.01.T01:CDS 45.0%
TGATTTCCTGGGAAACGCTA+CGG - Chr1:28541000-28541019 MsG0180001873.01.T01:intron 45.0%
TGGCTATCCCAGCTGTAATT+TGG + Chr1:28544937-28544956 None:intergenic 45.0%
TGGTGCAGTGAAATCCATGT+AGG + Chr1:28543020-28543039 None:intergenic 45.0%
TGGTTCTCCGAAGTTCAATC+TGG + Chr1:28544963-28544982 None:intergenic 45.0%
TGTCAAACTGTTGTTGCAGG+AGG - Chr1:28547568-28547587 MsG0180001873.01.T01:intron 45.0%
TGTCTCCTAGGTTACATAGC+AGG + Chr1:28547049-28547068 None:intergenic 45.0%
TTACTTCCACCACATTGCAG+TGG - Chr1:28541541-28541560 MsG0180001873.01.T01:intron 45.0%
TTCACCAAATTCTGCCCACT+TGG + Chr1:28541111-28541130 None:intergenic 45.0%
TTCCAAACATCTGCTGTCTC+AGG + Chr1:28543992-28544011 None:intergenic 45.0%
TTCGTTCCCTTTCTCTCTTC+CGG - Chr1:28535850-28535869 MsG0180001873.01.T01:three_prime_UTR 45.0%
TTCTTGTTCGAGCTTGAGCT+GGG + Chr1:28539513-28539532 None:intergenic 45.0%
TTGAAGAGCCTATAGTCACC+GGG + Chr1:28550088-28550107 None:intergenic 45.0%
TTGATAGAAGTGGCTGTTGG+GGG - Chr1:28549575-28549594 MsG0180001873.01.T01:intron 45.0%
TTTCTTGTTCGAGCTTGAGC+TGG + Chr1:28539514-28539533 None:intergenic 45.0%
! AACAAGCACAAGGCTCCTTT+TGG + Chr1:28549489-28549508 None:intergenic 45.0%
! AAGTGGGCAGAATTTGGTGA+AGG - Chr1:28541110-28541129 MsG0180001873.01.T01:intron 45.0%
! AGCTAAGTGTTTTCGCCATG+AGG - Chr1:28547371-28547390 MsG0180001873.01.T01:intron 45.0%
! AGTGGGCAGAATTTGGTGAA+GGG - Chr1:28541111-28541130 MsG0180001873.01.T01:intron 45.0%
! ATGCCTTTTCTCACCCAATG+TGG + Chr1:28548819-28548838 None:intergenic 45.0%
! ATTTTACAACCGTCCCCTAG+GGG + Chr1:28547082-28547101 None:intergenic 45.0%
! CATTTTACAACCGTCCCCTA+GGG + Chr1:28547083-28547102 None:intergenic 45.0%
! CTTTGACTTAGAGGAGAACC+AGG - Chr1:28545044-28545063 MsG0180001873.01.T01:intron 45.0%
! GCTAAGTGTTTTCGCCATGA+GGG - Chr1:28547372-28547391 MsG0180001873.01.T01:intron 45.0%
! GCTACGAACCACGATTTTAG+GGG - Chr1:28536965-28536984 MsG0180001873.01.T01:three_prime_UTR 45.0%
! GGGGTACCAGTCCATATATT+TGG + Chr1:28545708-28545727 None:intergenic 45.0%
! TCACATATTGTGGTGGAAGG+AGG - Chr1:28537616-28537635 MsG0180001873.01.T01:intron 45.0%
! TCATTTTACAACCGTCCCCT+AGG + Chr1:28547084-28547103 None:intergenic 45.0%
! TGCCTTTTCTCACCCAATGT+GGG + Chr1:28548818-28548837 None:intergenic 45.0%
! TTTGAAACTGCCAAGAGGGA+AGG - Chr1:28549743-28549762 MsG0180001873.01.T01:intron 45.0%
! TTTGGTGGTTCCAGCAATGA+TGG + Chr1:28549471-28549490 None:intergenic 45.0%
! TTTGTGCTGCTGACACTACT+TGG - Chr1:28547748-28547767 MsG0180001873.01.T01:intron 45.0%
!! AATATATGGACTGGTACCCC+TGG - Chr1:28545708-28545727 MsG0180001873.01.T01:CDS 45.0%
!! AGGAGCTCTAAGTTGAGACA+TGG + Chr1:28545624-28545643 None:intergenic 45.0%
!! CTAGGCTTTTTCCTGGAACT+AGG + Chr1:28550840-28550859 None:intergenic 45.0%
!! CTCCAAAAAATTGGGTTGGC+CGG + Chr1:28537014-28537033 None:intergenic 45.0%
!! TGTGATGGACTGATGACAGA+CGG - Chr1:28550744-28550763 MsG0180001873.01.T01:intron 45.0%
!!! AACCGGCCAACCCAATTTTT+TGG - Chr1:28537009-28537028 MsG0180001873.01.T01:three_prime_UTR 45.0%
!!! ACCTTTTGGCTTTAGGTGAG+AGG - Chr1:28536843-28536862 MsG0180001873.01.T01:three_prime_UTR 45.0%
!!! TGGAGAGACCTTTTGGCTTT+AGG - Chr1:28536836-28536855 MsG0180001873.01.T01:three_prime_UTR 45.0%
!!! TACTAATAAAATTTAAAATA+TGG + Chr1:28539319-28539338 None:intergenic 5.0%
ACAAGAACAGACACCGAGTG+AGG + Chr1:28535721-28535740 None:intergenic 50.0%
ACACCAAACACACTGACACG+TGG - Chr1:28536253-28536272 MsG0180001873.01.T01:intron 50.0%
ACAGGAAGCAGTGTGGTTCA+AGG - Chr1:28545668-28545687 MsG0180001873.01.T01:intron 50.0%
ACGTCCAAGTGGGCAGAATT+TGG - Chr1:28541104-28541123 MsG0180001873.01.T01:intron 50.0%
ACTTTCAGGCATGCTCATCC+AGG - Chr1:28539711-28539730 MsG0180001873.01.T01:intron 50.0%
AGACGGAAGAGGCAAATGTG+GGG - Chr1:28548608-28548627 MsG0180001873.01.T01:intron 50.0%
AGAGAAAGGGAACGAAAGCG+AGG + Chr1:28535846-28535865 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr1:28535955-28535974 None:intergenic 50.0%
AGAGAGAGCGAGTATACCTG+AGG + Chr1:28535917-28535936 None:intergenic 50.0%
AGGTACAAGCAGCACAAGCA+AGG + Chr1:28537046-28537065 None:intergenic 50.0%
AGTCTCACTCGCTCACTCTT+AGG + Chr1:28536798-28536817 None:intergenic 50.0%
ATCTGATCGTAGACCGCCAA+GGG + Chr1:28538660-28538679 None:intergenic 50.0%
ATGACAGGACCAAATGGTGG+TGG - Chr1:28547703-28547722 MsG0180001873.01.T01:CDS 50.0%
ATTCATGAAGGCCCTTGTGG+AGG - Chr1:28542949-28542968 MsG0180001873.01.T01:intron 50.0%
CAAGAACAGACACCGAGTGA+GGG + Chr1:28535720-28535739 None:intergenic 50.0%
CACCCAATGTGGGACTGTTA+AGG + Chr1:28548808-28548827 None:intergenic 50.0%
CACGCACAACACAACGAATG+TGG + Chr1:28535685-28535704 None:intergenic 50.0%
CACTCCCCCTTGAAACTTTC+CGG + Chr1:28537539-28537558 None:intergenic 50.0%
CAGGAAGCAGTGTGGTTCAA+GGG - Chr1:28545669-28545688 MsG0180001873.01.T01:intron 50.0%
CATTCGTTGTGTTGTGCGTG+TGG - Chr1:28535685-28535704 MsG0180001873.01.T01:three_prime_UTR 50.0%
CCACGTCAAGTTTACTCTGC+AGG - Chr1:28538315-28538334 MsG0180001873.01.T01:intron 50.0%
CCAGAACCTATGCCTGTAGT+AGG - Chr1:28539783-28539802 MsG0180001873.01.T01:intron 50.0%
CCCTTGTCTCCTCTGTTTGA+TGG - Chr1:28538189-28538208 MsG0180001873.01.T01:intron 50.0%
CCTACTACAGGCATAGGTTC+TGG + Chr1:28539786-28539805 None:intergenic 50.0%
CCTGCAGAGTAAACTTGACG+TGG + Chr1:28538318-28538337 None:intergenic 50.0%
CCTTGGTGAGCTCCAAAACT+TGG - Chr1:28543693-28543712 MsG0180001873.01.T01:intron 50.0%
CGAGAGGGAATGAAGGAAGA+AGG + Chr1:28535891-28535910 None:intergenic 50.0%
CGAGGAACAGAGACTGCAAA+AGG - Chr1:28549520-28549539 MsG0180001873.01.T01:intron 50.0%
CGTGCACATCGATCGAAAGA+AGG - Chr1:28550787-28550806 MsG0180001873.01.T01:intron 50.0%
CTCAGGAATTCCTTCCCTCT+TGG + Chr1:28549756-28549775 None:intergenic 50.0%
CTGCAACTCCTGCCATAGTT+TGG + Chr1:28537754-28537773 None:intergenic 50.0%
CTTGCAGTGAAGGGAGAAGA+AGG - Chr1:28546725-28546744 MsG0180001873.01.T01:intron 50.0%
GAAAAAGGGAGGAGAAGGCT+TGG + Chr1:28540129-28540148 None:intergenic 50.0%
GAAATCCATGTAGGCCCTGT+TGG + Chr1:28543011-28543030 None:intergenic 50.0%
GAGAAAGGGAACGAAAGCGA+GGG + Chr1:28535845-28535864 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + Chr1:28535956-28535975 None:intergenic 50.0%
GAGCCCTATTTCCGAAGACA+CGG + Chr1:28541374-28541393 None:intergenic 50.0%
GAGGAAACGAGAGGGAATGA+AGG + Chr1:28535898-28535917 None:intergenic 50.0%
GAGGGAATGAAGGAAGAAGG+AGG + Chr1:28535888-28535907 None:intergenic 50.0%
GCAAAAGGGACTTGCATTGC+AGG - Chr1:28549535-28549554 MsG0180001873.01.T01:intron 50.0%
GCACATGGCAAAGCTGATAC+TGG - Chr1:28540776-28540795 MsG0180001873.01.T01:intron 50.0%
GCCAGAGCCAGATTGAACTT+CGG - Chr1:28544953-28544972 MsG0180001873.01.T01:intron 50.0%
GGAAGATAGGAGAGAAGGGA+GGG - Chr1:28539929-28539948 MsG0180001873.01.T01:intron 50.0%
GGCGCTGTGCTTAATACTGT+TGG - Chr1:28547661-28547680 MsG0180001873.01.T01:intron 50.0%
GGGACTTTGGATACTGGAAG+AGG + Chr1:28543820-28543839 None:intergenic 50.0%
GGTAATCCACTGCAATGTGG+TGG + Chr1:28541550-28541569 None:intergenic 50.0%
GGTACAAGCAGCACAAGCAA+GGG + Chr1:28537045-28537064 None:intergenic 50.0%
GGTCCTTAACAGTCCCACAT+TGG - Chr1:28548802-28548821 MsG0180001873.01.T01:intron 50.0%
GGTCGGGGATTGTATCTCAT+AGG - Chr1:28536929-28536948 MsG0180001873.01.T01:three_prime_UTR 50.0%
GGTTAGGGAGGGAAAGGAAT+AGG - Chr1:28539966-28539985 MsG0180001873.01.T01:intron 50.0%
GTCCCACATTGGGTGAGAAA+AGG - Chr1:28548813-28548832 MsG0180001873.01.T01:intron 50.0%
GTGTGTGTGTGTGTGTGTGT+GGG + Chr1:28538387-28538406 None:intergenic 50.0%
GTTTACCACTACGAAGGTGG+AGG - Chr1:28545797-28545816 MsG0180001873.01.T01:CDS 50.0%
TATCTGATCGTAGACCGCCA+AGG + Chr1:28538661-28538680 None:intergenic 50.0%
TCACTCGCTCACTCTTAGGT+TGG + Chr1:28536794-28536813 None:intergenic 50.0%
TCATTCCCTCTCGTTTCCTC+AGG - Chr1:28535898-28535917 MsG0180001873.01.T01:three_prime_UTR 50.0%
TCCACAAGGGCCTTCATGAA+TGG + Chr1:28542950-28542969 None:intergenic 50.0%
TCCATTCATGAAGGCCCTTG+TGG - Chr1:28542946-28542965 MsG0180001873.01.T01:intron 50.0%
TGAAGAGCCTATAGTCACCG+GGG + Chr1:28550087-28550106 None:intergenic 50.0%
TGCGGGTTTAAATCCCTTGG+CGG - Chr1:28538644-28538663 MsG0180001873.01.T01:intron 50.0%
TGCTGATGTGAGATTGGGGA+GGG - Chr1:28539034-28539053 MsG0180001873.01.T01:intron 50.0%
TGGAAGATAGGAGAGAAGGG+AGG - Chr1:28539928-28539947 MsG0180001873.01.T01:intron 50.0%
TGGTTGCCCTGTTGTGGTAT+TGG - Chr1:28538694-28538713 MsG0180001873.01.T01:intron 50.0%
TGTAGGCTACTATGGGGAAC+AGG - Chr1:28536908-28536927 MsG0180001873.01.T01:three_prime_UTR 50.0%
TGTCCACGTGTCAGTGTGTT+TGG + Chr1:28536259-28536278 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG + Chr1:28538386-28538405 None:intergenic 50.0%
TGTTTGTGCAGTCTGAAGGC+AGG - Chr1:28538252-28538271 MsG0180001873.01.T01:intron 50.0%
! AAGCACAAGGCTCCTTTTGG+TGG + Chr1:28549486-28549505 None:intergenic 50.0%
! AAGGGATGGAGGAAGGGTTT+TGG + Chr1:28540100-28540119 None:intergenic 50.0%
! GCAGCACAAGCAAGGGTTTT+AGG + Chr1:28537038-28537057 None:intergenic 50.0%
! GTGGGCAGAATTTGGTGAAG+GGG - Chr1:28541112-28541131 MsG0180001873.01.T01:intron 50.0%
! TCCGAAGTTCAATCTGGCTC+TGG + Chr1:28544957-28544976 None:intergenic 50.0%
! TGGGCAGAATTTGGTGAAGG+GGG - Chr1:28541113-28541132 MsG0180001873.01.T01:intron 50.0%
!! AAAATTGGGTTGGCCGGTTG+TGG + Chr1:28537008-28537027 None:intergenic 50.0%
!! AGAAGCCTCGATTCGGAAGT+TGG + Chr1:28550891-28550910 None:intergenic 50.0%
!! CATCTCAGGTGTCATTCCGA+CGG - Chr1:28541492-28541511 MsG0180001873.01.T01:intron 50.0%
!! CGAGTATTAGTGCTGACCGA+TGG - Chr1:28548557-28548576 MsG0180001873.01.T01:intron 50.0%
!! CGTGTCAGTGTGTTTGGTGT+CGG + Chr1:28536253-28536272 None:intergenic 50.0%
!! GCGACCCTGTTTCTGATCTT+TGG - Chr1:28541183-28541202 MsG0180001873.01.T01:intron 50.0%
!! GCTTGTGCTGCTTGTACCTT+GGG - Chr1:28537047-28537066 MsG0180001873.01.T01:three_prime_UTR 50.0%
!! TGCTTGTGCTGCTTGTACCT+TGG - Chr1:28537046-28537065 MsG0180001873.01.T01:three_prime_UTR 50.0%
!!! CCAAGTTTTGGAGCTCACCA+AGG + Chr1:28543696-28543715 None:intergenic 50.0%
!!! CGGCCAACCCAATTTTTTGG+AGG - Chr1:28537012-28537031 MsG0180001873.01.T01:three_prime_UTR 50.0%
AATCCCTCCTCGTCCACAAC+CGG - Chr1:28536992-28537011 MsG0180001873.01.T01:three_prime_UTR 55.0%
ACAACAGGGCAACCAGCTCT+GGG + Chr1:28538689-28538708 None:intergenic 55.0%
ACCACACTGCTTCCTGTTCC+CGG + Chr1:28545665-28545684 None:intergenic 55.0%
AGATAGGAGAGAAGGGAGGG+TGG - Chr1:28539932-28539951 MsG0180001873.01.T01:intron 55.0%
AGGGAGGGAAAGGAATAGGG+AGG - Chr1:28539970-28539989 MsG0180001873.01.T01:intron 55.0%
CAAAGGGGTGGCCGCAATTA+AGG - Chr1:28548148-28548167 MsG0180001873.01.T01:intron 55.0%
CGGAAAGTTTCAAGGGGGAG+TGG - Chr1:28537537-28537556 MsG0180001873.01.T01:intron 55.0%
CGGAATGACACCTGAGATGC+AGG + Chr1:28541491-28541510 None:intergenic 55.0%
CTACTATGGGGAACAGGTCG+GGG - Chr1:28536914-28536933 MsG0180001873.01.T01:three_prime_UTR 55.0%
CTGCTGATGTGAGATTGGGG+AGG - Chr1:28539033-28539052 MsG0180001873.01.T01:intron 55.0%
CTTAATTGCGGCCACCCCTT+TGG + Chr1:28548150-28548169 None:intergenic 55.0%
GAAGAGCCTATAGTCACCGG+GGG + Chr1:28550086-28550105 None:intergenic 55.0%
GAGAGAGAGAGGGAAGAGAG+AGG + Chr1:28535946-28535965 None:intergenic 55.0%
GATAGGAGAGAAGGGAGGGT+GGG - Chr1:28539933-28539952 MsG0180001873.01.T01:intron 55.0%
GATGTCCAACAGGGCCTACA+TGG - Chr1:28543003-28543022 MsG0180001873.01.T01:intron 55.0%
GCTACTATGGGGAACAGGTC+GGG - Chr1:28536913-28536932 MsG0180001873.01.T01:three_prime_UTR 55.0%
GGACAGAGACCGCTGTCAAT+TGG + Chr1:28539570-28539589 None:intergenic 55.0%
GGCTACTATGGGGAACAGGT+CGG - Chr1:28536912-28536931 MsG0180001873.01.T01:three_prime_UTR 55.0%
TCAGATAGCATCCCCAGAGC+TGG - Chr1:28538674-28538693 MsG0180001873.01.T01:intron 55.0%
TCGTTGTGTTGTGCGTGTGG+CGG - Chr1:28535688-28535707 MsG0180001873.01.T01:three_prime_UTR 55.0%
TGATGTGAGATTGGGGAGGG+TGG - Chr1:28539037-28539056 MsG0180001873.01.T01:intron 55.0%
TGCGACTTCACATCCACACC+TGG + Chr1:28545273-28545292 None:intergenic 55.0%
TTCCGTGGACAAAGCAGCTG+AGG - Chr1:28545439-28545458 MsG0180001873.01.T01:intron 55.0%
! GCATTGGGTTAGGGAGGGAA+AGG - Chr1:28539960-28539979 MsG0180001873.01.T01:intron 55.0%
! GGGCAGAATTTGGTGAAGGG+GGG - Chr1:28541114-28541133 MsG0180001873.01.T01:intron 55.0%
! GTCCTCAGCTGCTTTGTCCA+CGG + Chr1:28545444-28545463 None:intergenic 55.0%
!! TCAGGTGTCATTCCGACGGA+TGG - Chr1:28541496-28541515 MsG0180001873.01.T01:intron 55.0%
!! TGGCAGGCTAGGCTTTTTCC+TGG + Chr1:28550847-28550866 None:intergenic 55.0%
AACCCAGTAGCCACCCACGT+GGG + Chr1:28543656-28543675 None:intergenic 60.0%
AGGTGGAGGCCGCCTTATCA+AGG - Chr1:28545811-28545830 MsG0180001873.01.T01:CDS 60.0%
CAACAGGGCAACCAGCTCTG+GGG + Chr1:28538688-28538707 None:intergenic 60.0%
CACAACAGGGCAACCAGCTC+TGG + Chr1:28538690-28538709 None:intergenic 60.0%
CAGAGCTGGTTGCCCTGTTG+TGG - Chr1:28538688-28538707 MsG0180001873.01.T01:intron 60.0%
GGTGGAGGCCGCCTTATCAA+GGG - Chr1:28545812-28545831 MsG0180001873.01.T01:CDS 60.0%
TAACCCAGTAGCCACCCACG+TGG + Chr1:28543657-28543676 None:intergenic 60.0%
TCCGGGAACAGGAAGCAGTG+TGG - Chr1:28545661-28545680 MsG0180001873.01.T01:intron 60.0%
TGGCGGAAGAGTCCCTCACT+CGG - Chr1:28535705-28535724 MsG0180001873.01.T01:three_prime_UTR 60.0%
TGGTGAAGGGGGGCTGTTGT+GGG - Chr1:28541124-28541143 MsG0180001873.01.T01:intron 60.0%
TTGGTGAAGGGGGGCTGTTG+TGG - Chr1:28541123-28541142 MsG0180001873.01.T01:intron 60.0%
! GGAATCACGGCGGATTCAGC+AGG + Chr1:28547792-28547811 None:intergenic 60.0%
!! ATGGACTGGTACCCCTGGAG+AGG - Chr1:28545713-28545732 MsG0180001873.01.T01:CDS 60.0%
!! GTGGGGCATTGGGTTAGGGA+GGG - Chr1:28539955-28539974 MsG0180001873.01.T01:intron 60.0%
!! GTGGGTGGGGCATTGGGTTA+GGG - Chr1:28539951-28539970 MsG0180001873.01.T01:intron 60.0%
AGGAGAGAAGGGAGGGTGGG+TGG - Chr1:28539936-28539955 MsG0180001873.01.T01:intron 65.0%
CACTAGGGAATGGCCACCCC+CGG - Chr1:28550067-28550086 MsG0180001873.01.T01:intron 65.0%
GAGAGAAGGGAGGGTGGGTG+GGG - Chr1:28539938-28539957 MsG0180001873.01.T01:intron 65.0%
GAGCCTATAGTCACCGGGGG+TGG + Chr1:28550083-28550102 None:intergenic 65.0%
GGAGAGAAGGGAGGGTGGGT+GGG - Chr1:28539937-28539956 MsG0180001873.01.T01:intron 65.0%
GGTGAAGGGGGGCTGTTGTG+GGG - Chr1:28541125-28541144 MsG0180001873.01.T01:intron 65.0%
GTCCCACGTGGGTGGCTACT+GGG - Chr1:28543651-28543670 MsG0180001873.01.T01:intron 65.0%
TGGCCACCCCCGGTGACTAT+AGG - Chr1:28550077-28550096 MsG0180001873.01.T01:intron 65.0%
TGGCCGGTTGTGGACGAGGA+GGG + Chr1:28536998-28537017 None:intergenic 65.0%
TTGGCCGGTTGTGGACGAGG+AGG + Chr1:28536999-28537018 None:intergenic 65.0%
!! GGTGGGGCATTGGGTTAGGG+AGG - Chr1:28539954-28539973 MsG0180001873.01.T01:intron 65.0%
!! GGTGGGTGGGGCATTGGGTT+AGG - Chr1:28539950-28539969 MsG0180001873.01.T01:intron 65.0%
AGGGAGGGTGGGTGGGGCAT+TGG - Chr1:28539944-28539963 MsG0180001873.01.T01:intron 70.0%
GGCGGCCTCCACCTTCGTAG+TGG + Chr1:28545805-28545824 None:intergenic 70.0%
GGTCCCACGTGGGTGGCTAC+TGG - Chr1:28543650-28543669 MsG0180001873.01.T01:intron 70.0%
! GGGAGGGTGGGTGGGGCATT+GGG - Chr1:28539945-28539964 MsG0180001873.01.T01:intron 70.0%
!! GGGTTGGCCGGTTGTGGACG+AGG + Chr1:28537002-28537021 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 28535649 28551315 28535649 ID=MsG0180001873.01;Name=MsG0180001873.01
Chr1 mRNA 28535649 28551315 28535649 ID=MsG0180001873.01.T01;Parent=MsG0180001873.01;Name=MsG0180001873.01.T01;_AED=0.34;_eAED=0.35;_QI=421|0.41|0.5|0.88|0.41|0.44|18|836|541
Chr1 exon 28535649 28536201 28535649 ID=MsG0180001873.01.T01:exon:41890;Parent=MsG0180001873.01.T01
Chr1 exon 28536810 28537518 28536810 ID=MsG0180001873.01.T01:exon:41889;Parent=MsG0180001873.01.T01
Chr1 exon 28538140 28538206 28538140 ID=MsG0180001873.01.T01:exon:41888;Parent=MsG0180001873.01.T01
Chr1 exon 28541274 28541386 28541274 ID=MsG0180001873.01.T01:exon:41887;Parent=MsG0180001873.01.T01
Chr1 exon 28541621 28541690 28541621 ID=MsG0180001873.01.T01:exon:41886;Parent=MsG0180001873.01.T01
Chr1 exon 28543292 28543440 28543292 ID=MsG0180001873.01.T01:exon:41885;Parent=MsG0180001873.01.T01
Chr1 exon 28544357 28544424 28544357 ID=MsG0180001873.01.T01:exon:41884;Parent=MsG0180001873.01.T01
Chr1 exon 28544573 28544631 28544573 ID=MsG0180001873.01.T01:exon:41883;Parent=MsG0180001873.01.T01
Chr1 exon 28545685 28545872 28545685 ID=MsG0180001873.01.T01:exon:41882;Parent=MsG0180001873.01.T01
Chr1 exon 28546998 28547044 28546998 ID=MsG0180001873.01.T01:exon:41881;Parent=MsG0180001873.01.T01
Chr1 exon 28547160 28547231 28547160 ID=MsG0180001873.01.T01:exon:41880;Parent=MsG0180001873.01.T01
Chr1 exon 28547414 28547477 28547414 ID=MsG0180001873.01.T01:exon:41879;Parent=MsG0180001873.01.T01
Chr1 exon 28547680 28547727 28547680 ID=MsG0180001873.01.T01:exon:41878;Parent=MsG0180001873.01.T01
Chr1 exon 28548269 28548373 28548269 ID=MsG0180001873.01.T01:exon:41877;Parent=MsG0180001873.01.T01
Chr1 exon 28548641 28548701 28548641 ID=MsG0180001873.01.T01:exon:41876;Parent=MsG0180001873.01.T01
Chr1 exon 28549102 28549199 28549102 ID=MsG0180001873.01.T01:exon:41875;Parent=MsG0180001873.01.T01
Chr1 exon 28549327 28549467 28549327 ID=MsG0180001873.01.T01:exon:41874;Parent=MsG0180001873.01.T01
Chr1 exon 28551045 28551315 28551045 ID=MsG0180001873.01.T01:exon:41873;Parent=MsG0180001873.01.T01
Chr1 five_prime_UTR 28551045 28551315 28551045 ID=MsG0180001873.01.T01:five_prime_utr;Parent=MsG0180001873.01.T01
Chr1 five_prime_UTR 28549327 28549467 28549327 ID=MsG0180001873.01.T01:five_prime_utr;Parent=MsG0180001873.01.T01
Chr1 five_prime_UTR 28549191 28549199 28549191 ID=MsG0180001873.01.T01:five_prime_utr;Parent=MsG0180001873.01.T01
Chr1 CDS 28549102 28549190 28549102 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28548641 28548701 28548641 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28548269 28548373 28548269 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28547680 28547727 28547680 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28547414 28547477 28547414 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28547160 28547231 28547160 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28546998 28547044 28546998 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28545685 28545872 28545685 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28544573 28544631 28544573 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28544357 28544424 28544357 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28543292 28543440 28543292 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28541621 28541690 28541621 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28541274 28541386 28541274 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28538140 28538206 28538140 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 CDS 28537093 28537518 28537093 ID=MsG0180001873.01.T01:cds;Parent=MsG0180001873.01.T01
Chr1 three_prime_UTR 28536810 28537092 28536810 ID=MsG0180001873.01.T01:three_prime_utr;Parent=MsG0180001873.01.T01
Chr1 three_prime_UTR 28535649 28536201 28535649 ID=MsG0180001873.01.T01:three_prime_utr;Parent=MsG0180001873.01.T01
Gene Sequence

>MsG0180001873.01.T01

ATGTGCAAAAAACCCTCAACAATGAATCTAATTGAAAGGCTTGAATACTCAAATTTGCTTGGCATAGATTCTAACTTGAAGAATGGAAGTCTGAAGGCAGGAACACTTAACTGTGACATATTGCAGTTCAAGTCGCAATTTCCACGTCAAGTTGGAGACTTCTATGAAACTCTTGGGATAGACGCTTGTATTCTAGTTGAATATGCGGGTTTAAATCCCTTGGCGGTCTACGATCAGATAGCATCCCCAGAGCTGAATCTTAGGCAAACTTTGGATGATCTTACACGCAATGGTTATTCAGTGTGTATTGTGGAGGAAGTTCAAGGCCCAGCTCAAGCTCGAACAAGAAACGTCGTTTTATATCTGGGAAACCCCTATGTATATGGACTTATTGGGGCTGATCATGATATTGACTTTCCAGAACCTATGCCTGTAGTAGGCTTTGTTTGGAAGATAGGAGAGAAGGGAGGGTGGGTGGGGCATTGGCGTATTTCAGGAACGTCCAAGTGGGCAGAATTTGGTGAAGGGGGGCTGTTGTGGGGAGAATGTAGTTCCAGACATTCTGAATGGTTTGATGGCGACCCTGTTTCTGATCTTTGGTCAAGGTGTGATTCTAAACAGGATATATGTCTTTTGCATTTTTGTTTAATTTTGAATTTAACTGATATAAATAAGTATGTTAGGGATCTTCTTTTGAACCCTCCTTCTTATGAGATTGCATCCAAAATTCAAGCAACATGTAGACTTATGAGCAGTGTAACATGCTCAATTCCGGAATTTACGTGTGTTTCTTCAGCAAAGATTGCTAAGCTACTTGAATGGAAGGAGGCCAATCATATTGAACTTTGTAGAATAAAGAATGTGCTAGATGAAATATTGCACATGTACAGAAAACCTGAGCTCAATGAAATATTGAAACATTTAATTGGTCCCACGTGGGTGGCTACTGGGTGTGGATGTGAAGTCGCATCGCGTAAGATTGACGAAGTAATATCTCTGGATGGTGAGACAGATCAGAAAGTCACTGAAGATTTCACTCCTGTAGTTTCTAGAATAAAAGCTTCCATGTCTCAACTTAGAGCTCCTAAGGGAGAAATATCTTATCCGGGAACAGGAAGCAGTGTGGTTCAAGGGTTAATCAAGATTTATGTAGTGTCTAGTAAAAATGTATGTTTGTGGTCCTTAACAGTCCCACATTGGGTGGAAATGTCCGAACTTCGATCCATCATTGCTGGAACCACCAAAAGGAGCCTTGTGCTTGTTGATGAAATATGCGAGGAACAGAGACTGCAAAAGGGACTTGCATTGCAGGCAGCATCATTGAAACTCTTGATAGAAGTGGCTGTTGGGGGTGTGTCTACTCACTTGCATGATATATTTACCTTGCCACTGAACATCAAAAACACTGTACACAAAGCAATGGGCACAACTTGCATTGATGGACAAACAAAAACTACTTGGATGCTGCAAGATGGAGTTTGTAAAGAAAGTCTTGCTTTTGAAACTGCCAAGAGGGAAGGAATTCCTGAGATTGTTATCCAAAGAGCTGAAGATCTTTATCTGTCAGTTTATGCTAAGAAAACGCTTCTGCTGCAGAAAACTATGCAAACAGGAAGAATTGTCTAG

Protein sequence

>MsG0180001873.01.T01

MCKKPSTMNLIERLEYSNLLGIDSNLKNGSLKAGTLNCDILQFKSQFPRQVGDFYETLGIDACILVEYAGLNPLAVYDQIASPELNLRQTLDDLTRNGYSVCIVEEVQGPAQARTRNVVLYLGNPYVYGLIGADHDIDFPEPMPVVGFVWKIGEKGGWVGHWRISGTSKWAEFGEGGLLWGECSSRHSEWFDGDPVSDLWSRCDSKQDICLLHFCLILNLTDINKYVRDLLLNPPSYEIASKIQATCRLMSSVTCSIPEFTCVSSAKIAKLLEWKEANHIELCRIKNVLDEILHMYRKPELNEILKHLIGPTWVATGCGCEVASRKIDEVISLDGETDQKVTEDFTPVVSRIKASMSQLRAPKGEISYPGTGSSVVQGLIKIYVVSSKNVCLWSLTVPHWVEMSELRSIIAGTTKRSLVLVDEICEEQRLQKGLALQAASLKLLIEVAVGGVSTHLHDIFTLPLNIKNTVHKAMGTTCIDGQTKTTWMLQDGVCKESLAFETAKREGIPEIVIQRAEDLYLSVYAKKTLLLQKTMQTGRIV*