AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1406070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406070 MtrunA17_Chr4g0031951 98.541 1028 12 1 1 1028 1 1025 0.0 2093
Msa1406070 MtrunA17_Chr2g0328561 79.773 1058 169 12 1 1026 1 1045 0.0 1585
Msa1406070 MtrunA17_Chr5g0435601 57.564 1051 363 28 1 1024 9 1003 0.0 1071
Msa1406070 MtrunA17_Chr1g0199451 47.628 1033 425 27 20 1020 21 969 0.0 824
Msa1406070 MtrunA17_Chr2g0298151 39.569 1021 501 35 24 1010 35 973 0.0 557
Msa1406070 MtrunA17_Chr2g0298151 28.137 263 181 3 759 1020 650 905 3.54e-27 119
Msa1406070 MtrunA17_Chr5g0425961 32.508 323 205 7 691 1008 393 707 1.62e-45 176
Msa1406070 MtrunA17_Chr1g0207641 26.136 352 245 5 678 1021 118 462 3.86e-31 128
Msa1406070 MtrunA17_Chr3g0134501 26.644 289 201 5 691 974 209 491 1.25e-26 115
Msa1406070 MtrunA17_Chr2g0279091 32.768 177 114 2 831 1007 21 192 7.03e-26 106
Msa1406070 MtrunA17_Chr2g0279091 22.754 167 127 1 695 859 29 195 7.45e-11 62.8
Msa1406070 MtrunA17_Chr1g0202811 25.857 321 218 7 698 1007 94 405 1.98e-24 107
Msa1406070 MtrunA17_Chr2g0279101 33.333 138 88 2 691 824 424 561 1.99e-19 93.6
Msa1406070 MtrunA17_Chr5g0425331 28.402 169 116 3 724 888 19 186 9.55e-15 73.9
Msa1406070 MtrunA17_Chr2g0277761 23.132 281 191 5 696 969 114 376 2.03e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406070 AT2G29190.2 62.149 1033 314 21 1 1024 1 965 0.0 1165
Msa1406070 AT2G29190.1 62.149 1033 314 21 1 1024 1 965 0.0 1165
Msa1406070 AT2G29200.1 61.680 1036 310 22 1 1024 1 961 0.0 1157
Msa1406070 AT2G29200.2 61.680 1036 310 22 1 1024 1 961 0.0 1157
Msa1406070 AT2G29140.2 61.368 1038 312 27 1 1027 2 961 0.0 1130
Msa1406070 AT2G29140.1 61.368 1038 312 27 1 1027 2 961 0.0 1130
Msa1406070 AT3G10360.1 59.612 515 171 10 514 1020 506 991 0.0 598
Msa1406070 AT3G10360.1 32.787 366 223 10 20 365 26 388 4.40e-39 158
Msa1406070 AT3G20250.1 51.318 493 211 9 534 1012 422 899 1.80e-152 476
Msa1406070 AT3G20250.1 26.937 271 189 4 750 1018 564 827 1.49e-23 108
Msa1406070 AT3G20250.1 41.026 117 59 3 13 127 23 131 6.41e-15 80.1
Msa1406070 AT3G20250.3 51.318 493 211 9 534 1012 458 935 5.67e-152 476
Msa1406070 AT3G20250.3 26.937 271 189 4 750 1018 600 863 1.49e-23 108
Msa1406070 AT3G20250.3 41.026 117 59 3 13 127 23 131 5.67e-15 80.5
Msa1406070 AT3G20250.2 51.318 493 211 9 534 1012 458 935 5.67e-152 476
Msa1406070 AT3G20250.2 26.937 271 189 4 750 1018 600 863 1.49e-23 108
Msa1406070 AT3G20250.2 41.026 117 59 3 13 127 23 131 5.67e-15 80.5
Msa1406070 AT4G25880.1 47.746 488 209 8 531 1011 402 850 2.13e-139 440
Msa1406070 AT4G25880.1 27.650 217 125 4 833 1018 528 743 1.65e-15 82.0
Msa1406070 AT4G25880.5 47.746 488 209 8 531 1011 402 850 2.13e-139 440
Msa1406070 AT4G25880.5 27.650 217 125 4 833 1018 528 743 1.65e-15 82.0
Msa1406070 AT4G25880.4 47.746 488 209 8 531 1011 402 850 2.56e-139 440
Msa1406070 AT4G25880.4 27.650 217 125 4 833 1018 528 743 1.68e-15 82.0
Msa1406070 AT4G25880.3 46.721 488 208 9 531 1011 402 844 3.92e-133 424
Msa1406070 AT4G25880.3 27.919 197 110 4 853 1018 542 737 2.46e-13 75.1
Msa1406070 AT4G25880.2 46.721 488 208 9 531 1011 402 844 5.19e-133 423
Msa1406070 AT4G25880.2 27.919 197 110 4 853 1018 542 737 2.66e-13 75.1
Msa1406070 AT1G22240.1 32.198 323 208 6 690 1008 195 510 4.48e-50 186
Msa1406070 AT1G78160.2 31.677 322 209 6 691 1008 333 647 4.90e-47 180
Msa1406070 AT1G78160.1 31.677 322 209 6 691 1008 331 645 5.00e-47 179
Msa1406070 AT5G56510.4 29.907 321 216 4 691 1007 275 590 4.18e-44 170
Msa1406070 AT5G56510.6 29.907 321 216 4 691 1007 275 590 4.18e-44 170
Msa1406070 AT5G56510.2 29.907 321 216 4 691 1007 275 590 4.18e-44 170
Msa1406070 AT5G56510.1 29.907 321 216 4 691 1007 275 590 4.18e-44 170
Msa1406070 AT5G56510.3 29.907 321 216 4 691 1007 275 590 4.18e-44 170
Msa1406070 AT4G08840.1 30.723 332 214 8 684 1008 229 551 9.16e-41 159
Msa1406070 AT5G56510.5 30.796 289 191 4 691 975 275 558 5.36e-40 157
Msa1406070 AT5G56510.5 25.221 226 158 4 754 975 266 484 1.11e-13 75.5
Msa1406070 AT1G35730.2 29.448 326 214 7 691 1008 253 570 1.79e-38 152
Msa1406070 AT1G35730.1 29.448 326 214 7 691 1008 247 564 1.82e-38 152
Msa1406070 AT1G35750.1 30.960 323 208 9 691 1008 211 523 6.03e-36 144
Msa1406070 AT5G43090.1 19.565 322 244 4 696 1009 211 525 7.50e-17 85.5
Msa1406070 AT5G43110.1 19.940 331 245 8 689 1009 196 516 4.95e-14 76.6
Msa1406070 AT5G59280.1 23.350 197 147 3 779 975 96 288 2.52e-12 69.7
Msa1406070 AT1G35850.2 22.275 211 160 2 769 979 11 217 9.99e-12 67.0
Msa1406070 AT1G35850.1 25.000 168 123 1 812 979 100 264 1.96e-11 66.6

Find 311 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAATTAAAATTAAAATTT+TGG 0.042100 tig0023178:-82962 Msa1406070:five_prime_UTR
AATTCATCATTCACTAATTA+TGG 0.174717 tig0023178:-79957 Msa1406070:CDS
AAATCTATGTATAAACTTAA+AGG 0.196753 tig0023178:+76709 None:intergenic
TTTAGGTTGTTTCTGTTATT+AGG 0.204772 tig0023178:-82590 Msa1406070:five_prime_UTR
TATTACCTCCTCCACTAAAA+TGG 0.211836 tig0023178:+80012 None:intergenic
TGTTTGCTAATTCTCTTCTC+TGG 0.222652 tig0023178:+78865 None:intergenic
TTCAGATCATTGTGCCTAAT+TGG 0.235538 tig0023178:+79387 None:intergenic
TCATTTCCCTTATTCTCTTA+TGG 0.237837 tig0023178:-76446 Msa1406070:three_prime_UTR
ATAACTTTCTGCTGTGTTGC+AGG 0.238709 tig0023178:+78341 None:intergenic
GAATTAGCAAACAAGCTTAT+TGG 0.240600 tig0023178:-78855 Msa1406070:CDS
TTAGGTTGTTTCTGTTATTA+GGG 0.246924 tig0023178:-82589 Msa1406070:five_prime_UTR
CTTGGAGGTGGTTTGGCTTC+GGG 0.253219 tig0023178:-79795 Msa1406070:CDS
CCGGACATGTTGTTGAATTC+AGG 0.255779 tig0023178:-79212 Msa1406070:intron
CACATGTTTCCAGCACCTTT+TGG 0.257902 tig0023178:+77123 None:intergenic
CCCTGCTAACTCCTTTATTA+TGG 0.263261 tig0023178:+77861 None:intergenic
GAGTTTGCCATTGGACTTCC+TGG 0.265657 tig0023178:+79435 None:intergenic
CATTCTTCCATAAGAGAATA+AGG 0.268694 tig0023178:+76439 None:intergenic
AAAGAGAGTTGAATATATTT+AGG 0.269459 tig0023178:-82361 Msa1406070:CDS
AATTGCTGGTGGTGCTCTTC+AGG 0.270283 tig0023178:-79724 Msa1406070:CDS
GGCAATAACGAGGGTTGTTT+TGG 0.271807 tig0023178:-82452 Msa1406070:CDS
AAATTTATACTCATAATTAA+AGG 0.287208 tig0023178:+76479 None:intergenic
GATCTTGTGGCTGCTTTATC+CGG 0.292605 tig0023178:-80302 Msa1406070:CDS
TGGGGTGGTGATGGTTTGAT+TGG 0.296056 tig0023178:-81921 Msa1406070:CDS
GCATCTCACTGACTAGTATT+TGG 0.297311 tig0023178:+77758 None:intergenic
GCCTTCAGATGTATGGTTGC+CGG 0.298563 tig0023178:-78815 Msa1406070:CDS
GGTCAATTACCCTAAGGTTT+AGG 0.299499 tig0023178:-83090 Msa1406070:five_prime_UTR
GGTGGTTTGGCTTCGGGAGC+TGG 0.301964 tig0023178:-79789 Msa1406070:CDS
TCCAATCACCATGGTTACTA+TGG 0.303912 tig0023178:-79489 Msa1406070:CDS
GGGTTGTTTGGTGGCGGTGG+TGG 0.308233 tig0023178:-82290 Msa1406070:CDS
TCTTGGAGGTGGTTTGGCTT+CGG 0.314631 tig0023178:-79796 Msa1406070:CDS
TTGTTTGGTGGCGGTGGTGG+TGG 0.318004 tig0023178:-82287 Msa1406070:CDS
GCATGTAGATTCCGGGAATA+TGG 0.319387 tig0023178:-79310 Msa1406070:CDS
CAAGCTTCTGTTGAATAAAT+CGG 0.320765 tig0023178:+79086 None:intergenic
AGGTTTCAACAAAGGCTTAA+AGG 0.320928 tig0023178:-82101 Msa1406070:CDS
AAACATCGGTGGCAGATTAC+TGG 0.323803 tig0023178:+79872 None:intergenic
TTATGTATTTCCTAAACCTT+AGG 0.323813 tig0023178:+83080 None:intergenic
GTCAGTCCAGATTCATTTAA+CGG 0.325283 tig0023178:-80353 Msa1406070:CDS
GATGAATTGGAGAAGGAAAT+AGG 0.331130 tig0023178:-82428 Msa1406070:CDS
TTGGTTCTTGCAAGAACCTT+AGG 0.336788 tig0023178:+82858 None:intergenic
ATAAAGTCGATCGCATCTTC+AGG 0.338577 tig0023178:+78545 None:intergenic
AATTATGGCTTAAGCGGTTA+TGG 0.338972 tig0023178:-79942 Msa1406070:CDS
GCCTCAGCTGTAGGTGGAAT+TGG 0.339799 tig0023178:-82074 Msa1406070:CDS
CTTTGTTGTCAAAGGAAGAT+TGG 0.348632 tig0023178:-82124 Msa1406070:CDS
GGAATGGACTCGAGAATTCT+TGG 0.352909 tig0023178:-79813 Msa1406070:CDS
GGATGAAAATGAGCCTCTTC+AGG 0.353867 tig0023178:-77725 Msa1406070:intron
TCATCTGCAACACAAAATAT+TGG 0.355905 tig0023178:-80530 Msa1406070:CDS
CCTTCTGATGTGCATAATCT+TGG 0.356676 tig0023178:-79762 Msa1406070:CDS
TTTGAGCTCTCTGAAATTGC+CGG 0.357733 tig0023178:-79231 Msa1406070:CDS
GGCCATTGAAGTTGTTGATC+TGG 0.361624 tig0023178:-78669 Msa1406070:CDS
GTAGCTCAGCCTGCCTGTGC+AGG 0.363181 tig0023178:+80087 None:intergenic
GTTTGCTAATTCTCTTCTCT+GGG 0.363844 tig0023178:+78866 None:intergenic
CAAATGTGAATTTGAATCCT+AGG 0.365913 tig0023178:-82157 Msa1406070:CDS
AGAATTCTCGAGTCCATTCC+AGG 0.367598 tig0023178:+79816 None:intergenic
TTTGGTGGCGGTGGTGGTGG+TGG 0.370104 tig0023178:-82284 Msa1406070:CDS
GACTAGAGGTTCTGCTGAAT+GGG 0.370560 tig0023178:-81940 Msa1406070:CDS
GTATGGCAACTACGTTGTTC+AGG 0.371359 tig0023178:-78276 Msa1406070:intron
GCACAACTTGGTGGTAAATC+AGG 0.373213 tig0023178:-79516 Msa1406070:CDS
GCAGATTACTGGTGCCATAT+TGG 0.375025 tig0023178:+79883 None:intergenic
GGAGGGTTGTTTGGTGGCGG+TGG 0.375334 tig0023178:-82293 Msa1406070:CDS
GAAACACCGTTAAATGAATC+TGG 0.376878 tig0023178:+80347 None:intergenic
TCATTTAACGGTGTTTCATC+TGG 0.379811 tig0023178:-80341 Msa1406070:CDS
GAGAATTCTTGGAGGTGGTT+TGG 0.380907 tig0023178:-79802 Msa1406070:CDS
ATAAAATAATAATAAAATTC+TGG 0.382771 tig0023178:-83061 Msa1406070:five_prime_UTR
TTTAAGAATGTTGTCTGAGT+TGG 0.383851 tig0023178:-82492 Msa1406070:exon
TCAGGGCATTTGCAAAGTTC+AGG 0.390626 tig0023178:-80140 Msa1406070:CDS
TCGAATGCATTACGACTTGC+TGG 0.393224 tig0023178:+80608 None:intergenic
AAAGAATCAACTCACGTTGA+TGG 0.394955 tig0023178:+77096 None:intergenic
CTCTGTGGACAGGAACTACT+TGG 0.395612 tig0023178:-79619 Msa1406070:CDS
ACACTTAGCCTTCAGATGTA+TGG 0.398859 tig0023178:-78822 Msa1406070:CDS
GGACCTTGGCATGTAGATTC+CGG 0.398933 tig0023178:-79318 Msa1406070:CDS
TTGATTGGTTTGCCTAGCTT+GGG 0.399163 tig0023178:-81906 Msa1406070:CDS
TCCTTGATGACTAACCAATA+TGG 0.400215 tig0023178:-79897 Msa1406070:CDS
TGCAAATTATGTTGTCCAAA+AGG 0.405660 tig0023178:-77138 Msa1406070:CDS
AATGCTGTTGGAGGGTTGTT+TGG 0.406393 tig0023178:-82302 Msa1406070:CDS
GTTGGCAGTGCCGATCAATA+TGG 0.408770 tig0023178:-79112 Msa1406070:intron
CTTCTTGCCTCCGTTGTTCG+CGG 0.408795 tig0023178:+82396 None:intergenic
TTTGATTGGTTTGCCTAGCT+TGG 0.410527 tig0023178:-81907 Msa1406070:CDS
GACCTTGGCATGTAGATTCC+GGG 0.412369 tig0023178:-79317 Msa1406070:CDS
TGTGCAGGGACAGATTATTA+AGG 0.414026 tig0023178:+80102 None:intergenic
TGGTAATTATGTGGTTCAAA+AGG 0.416660 tig0023178:-78984 Msa1406070:intron
TGAGCGTTCTACCATAATAA+AGG 0.420048 tig0023178:-77872 Msa1406070:CDS
GCTTTGATGACCGATGTCTT+TGG 0.420200 tig0023178:-79004 Msa1406070:CDS
ACATTTCTCCCTCCGCCAAT+AGG 0.420859 tig0023178:+80398 None:intergenic
AGTCCATGTCTCACACCTAT+TGG 0.422924 tig0023178:-80413 Msa1406070:CDS
GCTCAATATCAGTCTATAGA+TGG 0.428519 tig0023178:-79984 Msa1406070:CDS
AAAGCTTTCATCCATATTCC+CGG 0.428951 tig0023178:+79299 None:intergenic
AGACTAGAGGTTCTGCTGAA+TGG 0.433695 tig0023178:-81941 Msa1406070:CDS
TCCATAGTAACCATGGTGAT+TGG 0.434174 tig0023178:+79488 None:intergenic
CGGGAAGGAAGGCCTGTGAC+GGG 0.435937 tig0023178:+80632 None:intergenic
TTAAGAATGTTGTCTGAGTT+GGG 0.438319 tig0023178:-82491 Msa1406070:exon
ATTGTGCCTAATTGGACTTC+CGG 0.440448 tig0023178:+79395 None:intergenic
AAGCTTTGCTTCTTCTCTGT+TGG 0.443609 tig0023178:-79283 Msa1406070:CDS
CTTGCAATATGTTGTGGATC+AGG 0.445916 tig0023178:+80443 None:intergenic
GGGAAGGAAGGCCTGTGACG+GGG 0.448925 tig0023178:+80633 None:intergenic
TCTGCTGAATGGGGTGGTGA+TGG 0.451024 tig0023178:-81930 Msa1406070:CDS
ACGGTGTAAAGAGTATAAAA+TGG 0.452374 tig0023178:-76606 Msa1406070:three_prime_UTR
GCAGAGTTCGCTCATGTTCA+AGG 0.453542 tig0023178:-80554 Msa1406070:CDS
GGTGTTGGGTTGTCTTATCC+AGG 0.455102 tig0023178:-79453 Msa1406070:CDS
TACTATGGAAATCCGGCATA+TGG 0.455469 tig0023178:-79474 Msa1406070:CDS
GTATTTATAATCCTCATAGA+TGG 0.455914 tig0023178:-82889 Msa1406070:five_prime_UTR
ATTGGACTTCCGGATCCAAC+TGG 0.456227 tig0023178:+79405 None:intergenic
CGCTGTTAGCATGCTAGCAC+AGG 0.456310 tig0023178:-78303 Msa1406070:CDS
ATTACCTCCTCCACTAAAAT+GGG 0.458674 tig0023178:+80013 None:intergenic
TATGTATTTCCTAAACCTTA+GGG 0.458701 tig0023178:+83081 None:intergenic
ATACGGTTGTCGTGTGATAC+AGG 0.460160 tig0023178:-78477 Msa1406070:intron
CTGTAGGTGGAATTGGAGAT+AGG 0.461781 tig0023178:-82067 Msa1406070:CDS
TAACTTTCTGCTGTGTTGCA+GGG 0.468153 tig0023178:+78342 None:intergenic
TCTCTATGTCACGCCTAAGC+AGG 0.468281 tig0023178:+76861 None:intergenic
TCTGGTTCTCCAGTTGGATC+CGG 0.471107 tig0023178:-79414 Msa1406070:CDS
TATAATGATAATAAAACAAA+AGG 0.471474 tig0023178:+76407 None:intergenic
CGGATGGGAAATCAAATTGC+TGG 0.471590 tig0023178:-79738 Msa1406070:CDS
ACCATAATAAAGGAGTTAGC+AGG 0.471864 tig0023178:-77862 Msa1406070:CDS
ACTCATAATTAAAGGACAAA+AGG 0.473520 tig0023178:+76487 None:intergenic
ATCTTGTGGCTGCTTTATCC+GGG 0.475055 tig0023178:-80301 Msa1406070:CDS
TTGTTTCTGAGGAAGAGCTT+AGG 0.476657 tig0023178:-82211 Msa1406070:CDS
TTCAGAGAGCTCAAAACACT+TGG 0.477769 tig0023178:+79239 None:intergenic
TCCACCTCCTTTGTTGTCAA+AGG 0.478104 tig0023178:-82132 Msa1406070:CDS
CGCTAAATAACAGCATGTAC+TGG 0.478731 tig0023178:-77911 Msa1406070:intron
TATTCTTATGCTGCTGCACT+AGG 0.479040 tig0023178:-80494 Msa1406070:CDS
ATTCTTCCATAAGAGAATAA+GGG 0.480358 tig0023178:+76440 None:intergenic
TTGAAATATGAGTTATTCAA+AGG 0.480789 tig0023178:+80050 None:intergenic
GTTGATTCTTTCGCGGATCA+AGG 0.482294 tig0023178:-77084 Msa1406070:CDS
TTAACTTTAGGAAGCAAGAA+AGG 0.482450 tig0023178:-81983 Msa1406070:CDS
CTGGAATGAGGAACTTAGCT+GGG 0.483970 tig0023178:-79347 Msa1406070:CDS
TTGGATCCGGAAGTCCAATT+AGG 0.484418 tig0023178:-79401 Msa1406070:CDS
GGCATTAGTCGGTTAGCACT+TGG 0.485355 tig0023178:-83111 Msa1406070:five_prime_UTR
CCTTCAGATGTATGGTTGCC+GGG 0.485940 tig0023178:-78814 Msa1406070:CDS
ACTCAACCTGTGATGGCAAA+TGG 0.486010 tig0023178:+80252 None:intergenic
TTGAATAACTCATATTTCAA+AGG 0.487092 tig0023178:-80047 Msa1406070:CDS
GGTTCTTCGAATGCTGTTGG+AGG 0.487225 tig0023178:-82311 Msa1406070:CDS
TGCATTACGACTTGCTGGAC+GGG 0.489902 tig0023178:+80613 None:intergenic
TGGTTCTTGCAAGAACCTTA+GGG 0.489919 tig0023178:+82859 None:intergenic
TCCTTTGACAACAAAGGAGG+TGG 0.490018 tig0023178:+82131 None:intergenic
ATCAAGGATGTCAATGCTGC+AGG 0.490069 tig0023178:+79912 None:intergenic
TAATAGTATTGAAGATAAGC+TGG 0.491222 tig0023178:+82182 None:intergenic
ACTAGTATTTGGCGTTCTGC+AGG 0.492274 tig0023178:+77769 None:intergenic
CCATGGTTACTATGGAAATC+CGG 0.492697 tig0023178:-79481 Msa1406070:CDS
CATTCCAGGGGATGCCATCA+TGG 0.493072 tig0023178:+79830 None:intergenic
TGAAAACCATTTGCCATCAC+AGG 0.494917 tig0023178:-80258 Msa1406070:CDS
TCTCTAGTGTTGGCATTAGT+CGG 0.496543 tig0023178:-83122 Msa1406070:five_prime_UTR
TTATGTTGTCCAAAAGGTGC+TGG 0.500111 tig0023178:-77132 Msa1406070:CDS
GACTCGAGAATTCTTGGAGG+TGG 0.500582 tig0023178:-79807 Msa1406070:CDS
GAGGAACTTAGCTGGGGTCA+TGG 0.500851 tig0023178:-79340 Msa1406070:CDS
GGAAATCCGGCATATGGTGT+TGG 0.501027 tig0023178:-79468 Msa1406070:CDS
AATTTGAAGCTGGCGGCGAT+TGG 0.502181 tig0023178:+82839 None:intergenic
GTTGGAGGGTTGTTTGGTGG+CGG 0.503596 tig0023178:-82296 Msa1406070:CDS
GCTGTTGGAGGGTTGTTTGG+TGG 0.504057 tig0023178:-82299 Msa1406070:CDS
ATGCTAGCACAGGATCAGTA+TGG 0.504399 tig0023178:-78293 Msa1406070:CDS
AAAGGTGGGGCCTCAGCTGT+AGG 0.506111 tig0023178:-82083 Msa1406070:CDS
GCCATATTGGTTAGTCATCA+AGG 0.506645 tig0023178:+79896 None:intergenic
CCATTCACATCTTTATTCCC+AGG 0.507605 tig0023178:+82236 None:intergenic
GTAGAGAAACTTGTTGCTGC+TGG 0.508762 tig0023178:-77008 Msa1406070:CDS
TCACACGACAACCGTATGGA+TGG 0.509025 tig0023178:+78483 None:intergenic
CGATGTCTTTGGTAATTATG+TGG 0.509063 tig0023178:-78993 Msa1406070:CDS
GCAAACTCTGGTTCTCCAGT+TGG 0.509396 tig0023178:-79420 Msa1406070:CDS
GCATCCATGATGGCATCCCC+TGG 0.510554 tig0023178:-79834 Msa1406070:CDS
AGGAACTTAGCTGGGGTCAT+GGG 0.510621 tig0023178:-79339 Msa1406070:CDS
CGATGTATCTTCAGTATATG+AGG 0.513391 tig0023178:-79686 Msa1406070:CDS
AGCTGCAGAAAGCCTACCTC+GGG 0.513740 tig0023178:-79572 Msa1406070:CDS
ATCCAGATCAACAACTTCAA+TGG 0.514559 tig0023178:+78667 None:intergenic
ACGGGAAGGAAGGCCTGTGA+CGG 0.515589 tig0023178:+80631 None:intergenic
TGCAAAGTTCAGGTAAGAGC+AGG 0.518255 tig0023178:-80130 Msa1406070:CDS
TTAATAATCTGTCCCTGCAC+AGG 0.518328 tig0023178:-80100 Msa1406070:CDS
CATGATGGCATCCCCTGGAA+TGG 0.518574 tig0023178:-79829 Msa1406070:CDS
TAGCTCAGCCTGCCTGTGCA+GGG 0.519401 tig0023178:+80088 None:intergenic
CGCGAACAACGGAGGCAAGA+AGG 0.519552 tig0023178:-82395 Msa1406070:CDS
TTCAACAAAGGCTTAAAGGT+GGG 0.519587 tig0023178:-82097 Msa1406070:CDS
GAGGGTTCTTCGAATGCTGT+TGG 0.520775 tig0023178:-82314 Msa1406070:CDS
GGAAGGAAGGCCTGTGACGG+GGG 0.521269 tig0023178:+80634 None:intergenic
ATGAAGAAGCAGCTTGCACT+AGG 0.523389 tig0023178:+76804 None:intergenic
GACTTGCTGGACGGGAAGGA+AGG 0.525155 tig0023178:+80621 None:intergenic
TGCAACACAGCAGAAAGTTA+TGG 0.525725 tig0023178:-78339 Msa1406070:CDS
AACAGCATGTACTGGAACAT+GGG 0.530673 tig0023178:-77903 Msa1406070:intron
ATGCATTACGACTTGCTGGA+CGG 0.534318 tig0023178:+80612 None:intergenic
CGGATCAGCTCCTCCTACTG+TGG 0.534884 tig0023178:-82336 Msa1406070:CDS
TTCACTAATTATGGCTTAAG+CGG 0.535144 tig0023178:-79948 Msa1406070:CDS
GGAGAACCAGAGTTTGCCAT+TGG 0.537229 tig0023178:+79426 None:intergenic
AACGTGAGTTGATTCTTTCG+CGG 0.537306 tig0023178:-77091 Msa1406070:CDS
CCTGAATTCAACAACATGTC+CGG 0.537327 tig0023178:+79212 None:intergenic
TTGGGAAGAAGACCAGTGAT+TGG 0.538163 tig0023178:-82473 Msa1406070:CDS
TCTGGAATGAGGAACTTAGC+TGG 0.538248 tig0023178:-79348 Msa1406070:CDS
CGTTGCCGCTGCATCCATGA+TGG 0.538440 tig0023178:-79844 Msa1406070:CDS
TTAACGACCCCTCTGTGGAC+AGG 0.539471 tig0023178:-79629 Msa1406070:CDS
GAAATCCGGCATATGGTGTT+GGG 0.539712 tig0023178:-79467 Msa1406070:CDS
TAATCTGTCCCTGCACAGGC+AGG 0.539929 tig0023178:-80096 Msa1406070:CDS
AACAAAGGAGGTGGAAGCCT+AGG 0.542530 tig0023178:+82140 None:intergenic
GGTGGTGGTGGTGTTGCTGG+TGG 0.542676 tig0023178:-82272 Msa1406070:CDS
GCACTTGGTCAATTACCCTA+AGG 0.543543 tig0023178:-83096 Msa1406070:five_prime_UTR
GAGATGGTTAAAGAGCTTGA+TGG 0.544811 tig0023178:-78635 Msa1406070:CDS
CCTGGGAATAAAGATGTGAA+TGG 0.545695 tig0023178:-82236 Msa1406070:CDS
TAGCTGGGGTCATGGGACCT+TGG 0.546671 tig0023178:-79332 Msa1406070:CDS
TGTTGTCAAAGGAAGATTGG+AGG 0.547757 tig0023178:-82121 Msa1406070:CDS
GAAGCAAGAAAGGAGTGAGG+TGG 0.548502 tig0023178:-81973 Msa1406070:CDS
CCCTCGTTATTGCCAATCAC+TGG 0.550459 tig0023178:+82461 None:intergenic
GGAATTGGAGATAGGAGGAA+AGG 0.551298 tig0023178:-82059 Msa1406070:CDS
ATACTAGTCAGTGAGATGCT+TGG 0.551333 tig0023178:-77754 Msa1406070:CDS
ATCAGCTCCTCCTACTGTGG+AGG 0.551480 tig0023178:-82333 Msa1406070:CDS
TAACAGCATGTACTGGAACA+TGG 0.552212 tig0023178:-77904 Msa1406070:intron
TCACAGTACAATGCACAACT+TGG 0.552843 tig0023178:-79528 Msa1406070:CDS
TTCAATCAGCGGAAACACAT+AGG 0.554613 tig0023178:+76775 None:intergenic
AGGAGAGAGGAATTTGAAGC+TGG 0.555109 tig0023178:+82829 None:intergenic
CAGACACTTCTCCACAACAT+TGG 0.558684 tig0023178:+77804 None:intergenic
CAATCTTCCTTTGACAACAA+AGG 0.558768 tig0023178:+82125 None:intergenic
ACACTTCTCCACAACATTGG+AGG 0.559112 tig0023178:+77807 None:intergenic
GCGTTCTGCAGGACCACTGA+AGG 0.559249 tig0023178:+77780 None:intergenic
GTTCTTCGAATGCTGTTGGA+GGG 0.560600 tig0023178:-82310 Msa1406070:CDS
GCAGCATAAGAATATGAAGC+TGG 0.563611 tig0023178:+80503 None:intergenic
TAAAGTCGATCGCATCTTCA+GGG 0.565024 tig0023178:+78546 None:intergenic
TTGCTTCTAAGTCCCAAGCT+AGG 0.565095 tig0023178:+81894 None:intergenic
TCAGACTCCTCAACCTGCTT+AGG 0.568481 tig0023178:-76874 Msa1406070:exon
CCATGTCTCACACCTATTGG+CGG 0.568595 tig0023178:-80410 Msa1406070:CDS
TTCCCGGAATCTACATGCCA+AGG 0.568700 tig0023178:+79315 None:intergenic
AAGATTGGAGGTTTCAACAA+AGG 0.569404 tig0023178:-82109 Msa1406070:CDS
TCAACAAAGGCTTAAAGGTG+GGG 0.569868 tig0023178:-82096 Msa1406070:CDS
CTGATCCACAACATATTGCA+AGG 0.570840 tig0023178:-80442 Msa1406070:CDS
ACTGATTGTGACAAAAGTTG+AGG 0.571111 tig0023178:+82778 None:intergenic
GGAAGTCCAATGGCAAACTC+TGG 0.573092 tig0023178:-79432 Msa1406070:CDS
TGTCTCACACCTATTGGCGG+AGG 0.573681 tig0023178:-80407 Msa1406070:CDS
TGTTGTTGCAGAGAGAAGAA+TGG 0.573757 tig0023178:-76901 Msa1406070:intron
TTCTGCTGACAAGTTCATCC+CGG 0.574635 tig0023178:+80283 None:intergenic
CAGTACAATGCACAACTTGG+TGG 0.574796 tig0023178:-79525 Msa1406070:CDS
GACAACCCAACACCATATGC+CGG 0.575951 tig0023178:+79462 None:intergenic
AAGTAGTTCCTGTCCACAGA+GGG 0.576360 tig0023178:+79621 None:intergenic
TGTATCACACGACAACCGTA+TGG 0.576443 tig0023178:+78479 None:intergenic
AGATACATCGGATCAACAAA+CGG 0.577913 tig0023178:+79699 None:intergenic
GGATGCCATCATGGATGCAG+CGG 0.578490 tig0023178:+79839 None:intergenic
GGAGCCCTTGCAATATGTTG+TGG 0.578921 tig0023178:+80437 None:intergenic
ACAAAAGTTGAGGTTAAGAA+TGG 0.579050 tig0023178:+82788 None:intergenic
CCCGGCAACCATACATCTGA+AGG 0.580730 tig0023178:+78814 None:intergenic
TGGTTGCCGGGTTATTCAGA+AGG 0.581227 tig0023178:-78802 Msa1406070:intron
GAAGAACCCTCCACAGTAGG+AGG 0.582463 tig0023178:+82326 None:intergenic
AAATCGGCTTCCATATTGAT+CGG 0.582623 tig0023178:+79102 None:intergenic
TCTTATGCTGCTGCACTAGG+AGG 0.584290 tig0023178:-80491 Msa1406070:CDS
CAGTGAGATGCTTGGAACCA+CGG 0.584655 tig0023178:-77746 Msa1406070:CDS
TGCTTCCTAAAGTTAAAACC+AGG 0.584967 tig0023178:+81990 None:intergenic
ACATCAGACTCAACCTGTGA+TGG 0.587173 tig0023178:+80245 None:intergenic
GAGCTGCAGAAAGCCTACCT+CGG 0.589123 tig0023178:-79573 Msa1406070:CDS
TATGGCTTAAGCGGTTATGG+TGG 0.589443 tig0023178:-79939 Msa1406070:CDS
CCATAATAAAGGAGTTAGCA+GGG 0.589588 tig0023178:-77861 Msa1406070:CDS
TTACGACTTGCTGGACGGGA+AGG 0.592541 tig0023178:+80617 None:intergenic
TCAGCTCCTCCTACTGTGGA+GGG 0.593400 tig0023178:-82332 Msa1406070:CDS
CTGATGTGCATAATCTTGGT+CGG 0.593961 tig0023178:-79758 Msa1406070:CDS
GAATGTTGCTCCGCGAACAA+CGG 0.594205 tig0023178:-82406 Msa1406070:CDS
TGTGAATGGTGTTGTTTCTG+AGG 0.595945 tig0023178:-82222 Msa1406070:CDS
AAAGTTTGCCTCCAATGTTG+TGG 0.596529 tig0023178:-77815 Msa1406070:CDS
CACACGACAACCGTATGGAT+GGG 0.596629 tig0023178:+78484 None:intergenic
ATAGATGGAACAAAACCCTA+AGG 0.596696 tig0023178:-82874 Msa1406070:five_prime_UTR
GAACGAGTCAGCAGATCTTG+TGG 0.598330 tig0023178:-80315 Msa1406070:CDS
CCAAGATTATGCACATCAGA+AGG 0.600055 tig0023178:+79762 None:intergenic
GAGAAGTGTCTGACCTTCAG+TGG 0.600770 tig0023178:-77793 Msa1406070:CDS
CTCATATACTGAAGATACAT+CGG 0.602572 tig0023178:+79687 None:intergenic
TGTCACGCCTAAGCAGGTTG+AGG 0.603224 tig0023178:+76867 None:intergenic
TGCGACGATGTGCTTTCCAT+AGG 0.603355 tig0023178:+77034 None:intergenic
GGTGGGGCCTCAGCTGTAGG+TGG 0.603539 tig0023178:-82080 Msa1406070:CDS
CGAGAGAACAGACCCGAGGT+AGG 0.604952 tig0023178:+79560 None:intergenic
GAATTCTCGAGTCCATTCCA+GGG 0.606282 tig0023178:+79817 None:intergenic
CCGCCAATAGGTGTGAGACA+TGG 0.607911 tig0023178:+80410 None:intergenic
AGAGAGGAATTTGAAGCTGG+CGG 0.608775 tig0023178:+82832 None:intergenic
ATGGACTCGAGAATTCTTGG+AGG 0.608966 tig0023178:-79810 Msa1406070:CDS
CATAGATTTCAAGCAAGATG+AGG 0.609826 tig0023178:-76695 Msa1406070:three_prime_UTR
ATAGGTGTGAGACATGGACT+AGG 0.610983 tig0023178:+80416 None:intergenic
GTGCATAATCTTGGTCGGAT+GGG 0.611291 tig0023178:-79753 Msa1406070:CDS
ATGCAGGGTGGTCAAGAGCA+CGG 0.614674 tig0023178:-80194 Msa1406070:CDS
GTCATCAAAGCAAGAGCATG+TGG 0.615784 tig0023178:+79016 None:intergenic
ACCAGTGATTGGCAATAACG+AGG 0.616587 tig0023178:-82462 Msa1406070:CDS
GTCTCACACCTATTGGCGGA+GGG 0.618213 tig0023178:-80406 Msa1406070:CDS
ACACTCTCAACCCATCCATA+CGG 0.618697 tig0023178:-78494 Msa1406070:CDS
TCCAATTCCACCTACAGCTG+AGG 0.621356 tig0023178:+82073 None:intergenic
GTCTTATCCAGGAAGTCCAA+TGG 0.621556 tig0023178:-79442 Msa1406070:CDS
CCGGATTTCCATAGTAACCA+TGG 0.622461 tig0023178:+79481 None:intergenic
CCTCCACTAAAATGGGAGGT+AGG 0.624243 tig0023178:+80020 None:intergenic
TTTGCTAATTCTCTTCTCTG+GGG 0.624320 tig0023178:+78867 None:intergenic
TGTGCATAATCTTGGTCGGA+TGG 0.625548 tig0023178:-79754 Msa1406070:CDS
TAGGTGGAATTGGAGATAGG+AGG 0.626161 tig0023178:-82064 Msa1406070:CDS
CGTTGTGTTCGTGATCAGAA+TGG 0.627328 tig0023178:-78602 Msa1406070:CDS
GGTAACATGACTGATGATAG+TGG 0.627522 tig0023178:-82038 Msa1406070:CDS
TCTCTTATGGAAGAATGTGA+CGG 0.634111 tig0023178:-76433 Msa1406070:three_prime_UTR
TGATCCACAACATATTGCAA+GGG 0.637872 tig0023178:-80441 Msa1406070:CDS
TCAATACCTTCTGAATAACC+CGG 0.639404 tig0023178:+78796 None:intergenic
AATGTCTCTTCTGACAAGAG+AGG 0.640214 tig0023178:-80380 Msa1406070:CDS
CACATAATTACCAAAGACAT+CGG 0.640601 tig0023178:+78994 None:intergenic
ATTATGGTAGAACGCTCATG+AGG 0.642626 tig0023178:+77877 None:intergenic
TTTCAACAAAGGCTTAAAGG+TGG 0.643542 tig0023178:-82098 Msa1406070:CDS
TGTTGCTCCGCGAACAACGG+AGG 0.644937 tig0023178:-82403 Msa1406070:CDS
TTCGAAGAACCCTCCACAGT+AGG 0.646124 tig0023178:+82323 None:intergenic
TCTTCCTTTGACAACAAAGG+AGG 0.647413 tig0023178:+82128 None:intergenic
GAGAAACTTGTTGCTGCTGG+AGG 0.648155 tig0023178:-77005 Msa1406070:intron
GTGGAGAATGAAAAGACTAG+AGG 0.648521 tig0023178:-81954 Msa1406070:CDS
ACCTCCTCCACTAAAATGGG+AGG 0.649721 tig0023178:+80016 None:intergenic
TGCTCTTAACGACCCCTCTG+TGG 0.649843 tig0023178:-79634 Msa1406070:CDS
CCAGTGATTGGCAATAACGA+GGG 0.651439 tig0023178:-82461 Msa1406070:CDS
ACTAGAGGTTCTGCTGAATG+GGG 0.652045 tig0023178:-81939 Msa1406070:CDS
AGAGGTTCTGCTGAATGGGG+TGG 0.654652 tig0023178:-81936 Msa1406070:CDS
GTAAAGAGTATAAAATGGTG+AGG 0.656250 tig0023178:-76601 Msa1406070:three_prime_UTR
TCTGGATCAGAAAATAGAGA+TGG 0.657851 tig0023178:-78651 Msa1406070:CDS
GAGTTGAATATATTTAGGAG+CGG 0.659139 tig0023178:-82356 Msa1406070:CDS
TCTGTGGACAGGAACTACTT+GGG 0.660127 tig0023178:-79618 Msa1406070:CDS
AAAGCAATCAATAATTAACA+AGG 0.662281 tig0023178:+82737 None:intergenic
GAAGGCTAAGTGTAAGAACA+TGG 0.665988 tig0023178:+78832 None:intergenic
GAGGCGAGAGAACAGACCCG+AGG 0.669263 tig0023178:+79556 None:intergenic
TTCCTAAAGTTAAAACCAGG+TGG 0.674057 tig0023178:+81993 None:intergenic
TGGAATGAGGAACTTAGCTG+GGG 0.676254 tig0023178:-79346 Msa1406070:CDS
TAGGAAGCAAGAAAGGAGTG+AGG 0.692795 tig0023178:-81976 Msa1406070:CDS
TCAGGCAACTCCAATCACCA+TGG 0.695180 tig0023178:-79498 Msa1406070:CDS
AATTCTCGAGTCCATTCCAG+GGG 0.695829 tig0023178:+79818 None:intergenic
ATGGGAAATCAAATTGCTGG+TGG 0.697193 tig0023178:-79735 Msa1406070:CDS
CAAGTAGTTCCTGTCCACAG+AGG 0.711575 tig0023178:+79620 None:intergenic
TGACTGATGATAGTGGTGGT+AGG 0.714880 tig0023178:-82031 Msa1406070:CDS
GAGGACGTCAGAGTATGCTG+CGG 0.731637 tig0023178:-79667 Msa1406070:CDS
AGTAGTTCCTGTCCACAGAG+GGG 0.733621 tig0023178:+79622 None:intergenic
AACATGACTGATGATAGTGG+TGG 0.782556 tig0023178:-82035 Msa1406070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATACTCATAATTAA+AGG + tig0023178:83070-83089 None:intergenic 10.0%
!!! TAAAATTAAAATTTTGGGTT+TGG - tig0023178:76590-76609 Msa1406070:three_prime_UTR 15.0%
!!! TTAAGAAAGTTTGAATTTTT+AGG - tig0023178:76939-76958 Msa1406070:intron 15.0%
!!! ATTAATCAAAAATTTAGAAC+AGG + tig0023178:77983-78002 None:intergenic 15.0%
!! TATTATAATAAACTACTTTC+AGG - tig0023178:78333-78352 Msa1406070:CDS 15.0%
!!! TTTAAATTTTCAGTTACATA+TGG - tig0023178:78695-78714 Msa1406070:intron 15.0%
!! ATTCAAGAAAATAATAGAAA+AGG + tig0023178:80813-80832 None:intergenic 15.0%
!! TAAAAGTAAAAAAAAGTCAA+GGG + tig0023178:82031-82050 None:intergenic 15.0%
!! TTAAAAGTAAAAAAAAGTCA+AGG + tig0023178:82032-82051 None:intergenic 15.0%
!!! TTTTTTTTACTTTTAACACT+TGG - tig0023178:82036-82055 Msa1406070:CDS 15.0%
!! AAATCTATGTATAAACTTAA+AGG + tig0023178:82840-82859 None:intergenic 15.0%
!!! ATGAGTATAAATTTTCTTTA+AGG - tig0023178:83076-83095 Msa1406070:five_prime_UTR 15.0%
!! AAAGCAATCAATAATTAACA+AGG + tig0023178:76812-76831 None:intergenic 20.0%
!!! TATTAGGGTTTGATAATTTT+TGG - tig0023178:76972-76991 Msa1406070:intron 20.0%
!! AAAGAGAGTTGAATATATTT+AGG - tig0023178:77185-77204 Msa1406070:intron 20.0%
!!! ATTGCAATTCTTTTGATTAA+TGG - tig0023178:78004-78023 Msa1406070:intron 20.0%
!!! CTAACATTTTAGTTTTATGT+TGG - tig0023178:78189-78208 Msa1406070:intron 20.0%
!!! GATTCAGAATTTTTTAGATA+TGG + tig0023178:79388-79407 None:intergenic 20.0%
!! TATCTAAAAAATTCTGAATC+AGG - tig0023178:79388-79407 Msa1406070:CDS 20.0%
!! ATCTAAAAAATTCTGAATCA+GGG - tig0023178:79389-79408 Msa1406070:CDS 20.0%
!! TTGAAATATGAGTTATTCAA+AGG + tig0023178:79499-79518 None:intergenic 20.0%
!! TTGAATAACTCATATTTCAA+AGG - tig0023178:79499-79518 Msa1406070:CDS 20.0%
!! AATTCATCATTCACTAATTA+TGG - tig0023178:79589-79608 Msa1406070:CDS 20.0%
!! GGTAAAAATTATTATTCTCT+CGG - tig0023178:80583-80602 Msa1406070:CDS 20.0%
!!! ATAATAAAAAACCTTTTGCA+TGG - tig0023178:81155-81174 Msa1406070:intron 20.0%
!!! ATGTATTACTCATCAATTTT+AGG - tig0023178:81868-81887 Msa1406070:CDS 20.0%
!! GGATTTAAAAATGTATATTG+TGG + tig0023178:81901-81920 None:intergenic 20.0%
!!! CTTTTTCTTTATCAAATGTA+CGG - tig0023178:83028-83047 Msa1406070:five_prime_UTR 20.0%
! TATGTATTTCCTAAACCTTA+GGG + tig0023178:76468-76487 None:intergenic 25.0%
! TTATGTATTTCCTAAACCTT+AGG + tig0023178:76469-76488 None:intergenic 25.0%
!!! TTAAAATTTTGGGTTTGGTT+TGG - tig0023178:76595-76614 Msa1406070:three_prime_UTR 25.0%
! GTATTTATAATCCTCATAGA+TGG - tig0023178:76657-76676 Msa1406070:three_prime_UTR 25.0%
!!! TTTAGGTTGTTTCTGTTATT+AGG - tig0023178:76956-76975 Msa1406070:intron 25.0%
!!! TTAGGTTGTTTCTGTTATTA+GGG - tig0023178:76957-76976 Msa1406070:intron 25.0%
!! TAATAGTATTGAAGATAAGC+TGG + tig0023178:77367-77386 None:intergenic 25.0%
!!! TTCATTTGTTTTTTTCTGCT+GGG - tig0023178:77827-77846 Msa1406070:CDS 25.0%
! TTCATATCATTCTATCTGTT+TGG - tig0023178:77920-77939 Msa1406070:intron 25.0%
! TCACAATGAGCTATAAATAA+TGG + tig0023178:78069-78088 None:intergenic 25.0%
! TTATTTATAGCTCATTGTGA+TGG - tig0023178:78069-78088 Msa1406070:intron 25.0%
!! CACTAATGTTCTTTTATGAT+CGG - tig0023178:78152-78171 Msa1406070:intron 25.0%
! ACTAAAATGTTAGATACTAC+AGG + tig0023178:78182-78201 None:intergenic 25.0%
!! GTATATGTTTATATTGGTCT+TGG - tig0023178:78446-78465 Msa1406070:intron 25.0%
! TTTCAGTTACATATGGAAAT+TGG - tig0023178:78702-78721 Msa1406070:intron 25.0%
!!! TTTCAGTTACTTTTTGTAAC+TGG - tig0023178:78804-78823 Msa1406070:CDS 25.0%
!! AATCATCAGAGATATCTTTT+TGG - tig0023178:79328-79347 Msa1406070:CDS 25.0%
! AACTACAGAAGAAAAAAACA+TGG - tig0023178:80490-80509 Msa1406070:CDS 25.0%
! AGAAAAAAACATGGTTTATC+AGG - tig0023178:80499-80518 Msa1406070:CDS 25.0%
!! TTATGTGACAAATGAGTTTT+AGG + tig0023178:81139-81158 None:intergenic 25.0%
! AAACAACAAAAAATTCCAGT+AGG + tig0023178:81320-81339 None:intergenic 25.0%
!! TTGGTTCTTCAAATATGATA+TGG - tig0023178:81480-81499 Msa1406070:intron 25.0%
! TGGTTCTTCAAATATGATAT+GGG - tig0023178:81481-81500 Msa1406070:intron 25.0%
!! TCAAATATGATATGGGTTTT+TGG - tig0023178:81488-81507 Msa1406070:intron 25.0%
!! TTGATATTATACCTAGTCTT+AGG - tig0023178:81937-81956 Msa1406070:CDS 25.0%
! AAAACATCATAACTGAACAA+CGG + tig0023178:82319-82338 None:intergenic 25.0%
! TTACAACGATAGAATAAGAA+TGG + tig0023178:82584-82603 None:intergenic 25.0%
!!! ACAACTTTATTTTCAATCAG+CGG + tig0023178:82785-82804 None:intergenic 25.0%
! ACTCATAATTAAAGGACAAA+AGG + tig0023178:83062-83081 None:intergenic 25.0%
! ATTCTTCCATAAGAGAATAA+GGG + tig0023178:83109-83128 None:intergenic 25.0%
!!! TTTTTTTCTCTCTCTAGTGT+TGG - tig0023178:76414-76433 Msa1406070:three_prime_UTR 30.0%
ACAAAAGTTGAGGTTAAGAA+TGG + tig0023178:76761-76780 None:intergenic 30.0%
! GCTGAAAGTTGGAATTTTTA+TGG - tig0023178:76893-76912 Msa1406070:CDS 30.0%
!! TAGGGTTTGATAATTTTTGG+TGG - tig0023178:76975-76994 Msa1406070:intron 30.0%
!!! AGGGTTTGATAATTTTTGGT+GGG - tig0023178:76976-76995 Msa1406070:intron 30.0%
! GTTTTATGTGTGTTAGTGTT+TGG - tig0023178:77013-77032 Msa1406070:CDS 30.0%
TTTAAGAATGTTGTCTGAGT+TGG - tig0023178:77054-77073 Msa1406070:CDS 30.0%
TTAAGAATGTTGTCTGAGTT+GGG - tig0023178:77055-77074 Msa1406070:CDS 30.0%
GAGTTGAATATATTTAGGAG+CGG - tig0023178:77190-77209 Msa1406070:intron 30.0%
CAAATGTGAATTTGAATCCT+AGG - tig0023178:77389-77408 Msa1406070:intron 30.0%
! TTAACTTTAGGAAGCAAGAA+AGG - tig0023178:77563-77582 Msa1406070:intron 30.0%
!!! TTTGTTGTTTTCTGCTGTTA+AGG - tig0023178:77772-77791 Msa1406070:CDS 30.0%
!!! GTTCATTTGTTTTTTTCTGC+TGG - tig0023178:77826-77845 Msa1406070:CDS 30.0%
!!! GATGGTACTTTTGCTATTTA+AGG - tig0023178:77857-77876 Msa1406070:CDS 30.0%
!! TTTGCTATTTAAGGCTGTAT+TGG - tig0023178:77866-77885 Msa1406070:CDS 30.0%
TAACTGACAATATGCATCTT+TGG - tig0023178:78032-78051 Msa1406070:intron 30.0%
AGCATATCATTCAATGCATT+CGG - tig0023178:78099-78118 Msa1406070:intron 30.0%
CGATCATAAAAGAACATTAG+TGG + tig0023178:78154-78173 None:intergenic 30.0%
CATGTCAAATGCTTTATATG+CGG + tig0023178:78270-78289 None:intergenic 30.0%
GGCAGAGTATATGTTTATAT+TGG - tig0023178:78440-78459 Msa1406070:intron 30.0%
GAGAAGAGTTTGAATAACAA+GGG + tig0023178:78635-78654 None:intergenic 30.0%
AGAGAAGAGTTTGAATAACA+AGG + tig0023178:78636-78655 None:intergenic 30.0%
! ATTTATTTGTTGACCTGTAG+AGG - tig0023178:78726-78745 Msa1406070:intron 30.0%
AAAATTGTATTTGCCTCTAC+AGG + tig0023178:78742-78761 None:intergenic 30.0%
ATATCATCCTGCAAAATTAC+CGG + tig0023178:78881-78900 None:intergenic 30.0%
TCATCTGCAACACAAAATAT+TGG - tig0023178:79016-79035 Msa1406070:CDS 30.0%
!! AGATATCTTTTTGGTATGCA+GGG - tig0023178:79337-79356 Msa1406070:CDS 30.0%
TTCACTAATTATGGCTTAAG+CGG - tig0023178:79598-79617 Msa1406070:CDS 30.0%
CTCATATACTGAAGATACAT+CGG + tig0023178:79862-79881 None:intergenic 30.0%
TTGACTTAATTTACGATCGT+TGG - tig0023178:80416-80435 Msa1406070:CDS 30.0%
CAAGCTTCTGTTGAATAAAT+CGG + tig0023178:80463-80482 None:intergenic 30.0%
CACATAATTACCAAAGACAT+CGG + tig0023178:80555-80574 None:intergenic 30.0%
TGGTAATTATGTGGTTCAAA+AGG - tig0023178:80562-80581 Msa1406070:CDS 30.0%
!! CGGTTTATCATTCTTTTTCA+TGG - tig0023178:80603-80622 Msa1406070:CDS 30.0%
!! ATCATTCTTTTTCATGGATC+TGG - tig0023178:80609-80628 Msa1406070:CDS 30.0%
GAATTAGCAAACAAGCTTAT+TGG - tig0023178:80691-80710 Msa1406070:intron 30.0%
!! TCAGAAGGTATTGATGATTT+AGG - tig0023178:80759-80778 Msa1406070:intron 30.0%
!! AAGGTATTGATGATTTAGGT+TGG - tig0023178:80763-80782 Msa1406070:intron 30.0%
TAAAGAGAGTCCATATTGAA+AGG + tig0023178:80857-80876 None:intergenic 30.0%
TTTCAATATGGACTCTCTTT+AGG - tig0023178:80856-80875 Msa1406070:intron 30.0%
! AAAGTTATGGACGAGATTTT+AGG - tig0023178:81220-81239 Msa1406070:intron 30.0%
! CATTTTTAAATCCACTGTCT+CGG - tig0023178:81908-81927 Msa1406070:CDS 30.0%
! ATGATTTGAAACCTAAGACT+AGG + tig0023178:81951-81970 None:intergenic 30.0%
AGTAAAAAAAAGTCAAGGGA+TGG + tig0023178:82027-82046 None:intergenic 30.0%
CAAGAACGAATATGTGATAT+TGG + tig0023178:82208-82227 None:intergenic 30.0%
CAAAGAATTATAAGGATGGT+TGG + tig0023178:82236-82255 None:intergenic 30.0%
CAGTCAAAGAATTATAAGGA+TGG + tig0023178:82240-82259 None:intergenic 30.0%
CATCCTTATAATTCTTTGAC+TGG - tig0023178:82238-82257 Msa1406070:CDS 30.0%
CAACCAGTCAAAGAATTATA+AGG + tig0023178:82244-82263 None:intergenic 30.0%
! ATTTTGCATAACATACGAAG+AGG + tig0023178:82342-82361 None:intergenic 30.0%
TGCAAATTATGTTGTCCAAA+AGG - tig0023178:82408-82427 Msa1406070:CDS 30.0%
! GCATTGAAAAAGTATACCTA+TGG - tig0023178:82496-82515 Msa1406070:exon 30.0%
AAGAATGGAAAGGATTAGAT+AGG + tig0023178:82569-82588 None:intergenic 30.0%
ACGATAGAATAAGAATGGAA+AGG + tig0023178:82579-82598 None:intergenic 30.0%
GTAATCACATCACATGTTAA+TGG - tig0023178:82600-82619 Msa1406070:five_prime_UTR 30.0%
GCAACAACAAATTACATGAA+CGG + tig0023178:82634-82653 None:intergenic 30.0%
! ATATTTTCATCTTCTCTGCA+GGG + tig0023178:82888-82907 None:intergenic 30.0%
! ACGGTGTAAAGAGTATAAAA+TGG - tig0023178:82940-82959 Msa1406070:five_prime_UTR 30.0%
! GTAAAGAGTATAAAATGGTG+AGG - tig0023178:82945-82964 Msa1406070:five_prime_UTR 30.0%
TGTACAAAAATGATGCTATG+TGG - tig0023178:82988-83007 Msa1406070:five_prime_UTR 30.0%
TCATTTCCCTTATTCTCTTA+TGG - tig0023178:83100-83119 Msa1406070:five_prime_UTR 30.0%
CATTCTTCCATAAGAGAATA+AGG + tig0023178:83110-83129 None:intergenic 30.0%
!! TTTTGTTGGGTTTGGGTTTT+TGG - tig0023178:76618-76637 Msa1406070:three_prime_UTR 35.0%
ATAGATGGAACAAAACCCTA+AGG - tig0023178:76672-76691 Msa1406070:three_prime_UTR 35.0%
TAAAGAGAAAAAGAGGAGAG+AGG + tig0023178:76733-76752 None:intergenic 35.0%
GGTGCAATAAAGAGAAAAAG+AGG + tig0023178:76740-76759 None:intergenic 35.0%
ACTGATTGTGACAAAAGTTG+AGG + tig0023178:76771-76790 None:intergenic 35.0%
!! TGCTTTTAGTTGCTGAAAGT+TGG - tig0023178:76882-76901 Msa1406070:CDS 35.0%
!!! TTTTGGTGATGAATTGGAGA+AGG - tig0023178:77111-77130 Msa1406070:CDS 35.0%
GATGAATTGGAGAAGGAAAT+AGG - tig0023178:77118-77137 Msa1406070:CDS 35.0%
!! GTGGTTTTTCAGATTTTCCT+GGG - tig0023178:77293-77312 Msa1406070:intron 35.0%
CAATCTTCCTTTGACAACAA+AGG + tig0023178:77424-77443 None:intergenic 35.0%
! CTTTGTTGTCAAAGGAAGAT+TGG - tig0023178:77422-77441 Msa1406070:intron 35.0%
AAGATTGGAGGTTTCAACAA+AGG - tig0023178:77437-77456 Msa1406070:intron 35.0%
AGGTTTCAACAAAGGCTTAA+AGG - tig0023178:77445-77464 Msa1406070:intron 35.0%
TTTCAACAAAGGCTTAAAGG+TGG - tig0023178:77448-77467 Msa1406070:intron 35.0%
TTCAACAAAGGCTTAAAGGT+GGG - tig0023178:77449-77468 Msa1406070:intron 35.0%
TTCCTAAAGTTAAAACCAGG+TGG + tig0023178:77556-77575 None:intergenic 35.0%
TGCTTCCTAAAGTTAAAACC+AGG + tig0023178:77559-77578 None:intergenic 35.0%
CTACCTGAAAAATTTCAGCA+AGG + tig0023178:77687-77706 None:intergenic 35.0%
! TTGTTTTCTGCTGTTAAGGT+TGG - tig0023178:77776-77795 Msa1406070:CDS 35.0%
!!! CAATATGCATCTTTGGCTTT+TGG - tig0023178:78039-78058 Msa1406070:intron 35.0%
! ATAGCTCATTGTGATGGAAA+TGG - tig0023178:78075-78094 Msa1406070:intron 35.0%
! CGCATATAAAGCATTTGACA+TGG - tig0023178:78268-78287 Msa1406070:intron 35.0%
TATATCCTATACAACCCAAG+TGG + tig0023178:78359-78378 None:intergenic 35.0%
! TTTTATACCTCTCAGTGTTG+AGG - tig0023178:78419-78438 Msa1406070:intron 35.0%
!! TGGTCTTGGAGAATATGTTT+TGG - tig0023178:78460-78479 Msa1406070:intron 35.0%
TAATGCACTAGCAGAAAAAC+AGG - tig0023178:78554-78573 Msa1406070:CDS 35.0%
! GGTAATTTTGCAGGATGATA+TGG - tig0023178:78880-78899 Msa1406070:CDS 35.0%
TGATCCACAACATATTGCAA+GGG - tig0023178:79105-79124 Msa1406070:CDS 35.0%
GTCAGTCCAGATTCATTTAA+CGG - tig0023178:79193-79212 Msa1406070:intron 35.0%
GAAACACCGTTAAATGAATC+TGG + tig0023178:79202-79221 None:intergenic 35.0%
TCATTTAACGGTGTTTCATC+TGG - tig0023178:79205-79224 Msa1406070:intron 35.0%
!! GAGATATCTTTTTGGTATGC+AGG - tig0023178:79336-79355 Msa1406070:CDS 35.0%
ATTACCTCCTCCACTAAAAT+GGG + tig0023178:79536-79555 None:intergenic 35.0%
TATTACCTCCTCCACTAAAA+TGG + tig0023178:79537-79556 None:intergenic 35.0%
GCTCAATATCAGTCTATAGA+TGG - tig0023178:79562-79581 Msa1406070:CDS 35.0%
AATTATGGCTTAAGCGGTTA+TGG - tig0023178:79604-79623 Msa1406070:CDS 35.0%
! TCCTTGATGACTAACCAATA+TGG - tig0023178:79649-79668 Msa1406070:CDS 35.0%
AGATACATCGGATCAACAAA+CGG + tig0023178:79850-79869 None:intergenic 35.0%
CGATGTATCTTCAGTATATG+AGG - tig0023178:79860-79879 Msa1406070:CDS 35.0%
TTCAGATCATTGTGCCTAAT+TGG + tig0023178:80162-80181 None:intergenic 35.0%
AAAGCTTTCATCCATATTCC+CGG + tig0023178:80250-80269 None:intergenic 35.0%
! AAATCGGCTTCCATATTGAT+CGG + tig0023178:80447-80466 None:intergenic 35.0%
! CGATGTCTTTGGTAATTATG+TGG - tig0023178:80553-80572 Msa1406070:CDS 35.0%
AACTGCAAGATATCAACTAC+TGG + tig0023178:80640-80659 None:intergenic 35.0%
!!! ATCTTGCAGTTTTTTGAGCA+TGG - tig0023178:80649-80668 Msa1406070:CDS 35.0%
TTTGCTAATTCTCTTCTCTG+GGG + tig0023178:80682-80701 None:intergenic 35.0%
! GTTTGCTAATTCTCTTCTCT+GGG + tig0023178:80683-80702 None:intergenic 35.0%
! TGTTTGCTAATTCTCTTCTC+TGG + tig0023178:80684-80703 None:intergenic 35.0%
TCAATACCTTCTGAATAACC+CGG + tig0023178:80753-80772 None:intergenic 35.0%
TTTCCTCTGTCCTTTCAATA+TGG - tig0023178:80844-80863 Msa1406070:intron 35.0%
ATCCAGATCAACAACTTCAA+TGG + tig0023178:80882-80901 None:intergenic 35.0%
TCTGGATCAGAAAATAGAGA+TGG - tig0023178:80895-80914 Msa1406070:intron 35.0%
TAGCAAACACTGTAATGTTC+TGG + tig0023178:81544-81563 None:intergenic 35.0%
CGCTTCCTTTGATATACATA+CGG - tig0023178:81565-81584 Msa1406070:intron 35.0%
GCATACCGTATGTATATCAA+AGG + tig0023178:81573-81592 None:intergenic 35.0%
! CAGTACATGCTGTTATTTAG+CGG + tig0023178:81637-81656 None:intergenic 35.0%
TGAGCGTTCTACCATAATAA+AGG - tig0023178:81674-81693 Msa1406070:intron 35.0%
ACCATAATAAAGGAGTTAGC+AGG - tig0023178:81684-81703 Msa1406070:intron 35.0%
CCATAATAAAGGAGTTAGCA+GGG - tig0023178:81685-81704 Msa1406070:intron 35.0%
AGAGTTGAAAAAACCTGAAG+AGG + tig0023178:81837-81856 None:intergenic 35.0%
AATCCTAATATTGCATGAGC+TGG - tig0023178:81993-82012 Msa1406070:CDS 35.0%
!! TAACACTTGGTTGATTTGAG+TGG - tig0023178:82049-82068 Msa1406070:CDS 35.0%
!! TTGGTTGATTTGAGTGGTAA+GGG - tig0023178:82055-82074 Msa1406070:CDS 35.0%
TAACTGAACAACGGACAAAA+TGG + tig0023178:82310-82329 None:intergenic 35.0%
ATCATATCCCTCTTATATGC+AGG - tig0023178:82366-82385 Msa1406070:CDS 35.0%
ATCATTGCCTGCATATAAGA+GGG + tig0023178:82376-82395 None:intergenic 35.0%
AAAGAATCAACTCACGTTGA+TGG + tig0023178:82453-82472 None:intergenic 35.0%
CATAGATTTCAAGCAAGATG+AGG - tig0023178:82851-82870 Msa1406070:five_prime_UTR 35.0%
! CATATTTTCATCTTCTCTGC+AGG + tig0023178:82889-82908 None:intergenic 35.0%
!!! CTATACAAGCCCTTTTTTCA+CGG - tig0023178:82921-82940 Msa1406070:five_prime_UTR 35.0%
CTCTTTACACCGTGAAAAAA+GGG + tig0023178:82933-82952 None:intergenic 35.0%
ACTCTTTACACCGTGAAAAA+AGG + tig0023178:82934-82953 None:intergenic 35.0%
TCTCTTATGGAAGAATGTGA+CGG - tig0023178:83113-83132 Msa1406070:five_prime_UTR 35.0%
!! TCTCTAGTGTTGGCATTAGT+CGG - tig0023178:76424-76443 Msa1406070:three_prime_UTR 40.0%
GGTCAATTACCCTAAGGTTT+AGG - tig0023178:76456-76475 Msa1406070:three_prime_UTR 40.0%
!!! TGGGTTTGGTTTGGTTTTGT+TGG - tig0023178:76604-76623 Msa1406070:three_prime_UTR 40.0%
!!! GGGTTTGGTTTGGTTTTGTT+GGG - tig0023178:76605-76624 Msa1406070:three_prime_UTR 40.0%
!!! TGGTTTGGTTTTGTTGGGTT+TGG - tig0023178:76610-76629 Msa1406070:three_prime_UTR 40.0%
!!! GGTTTGGTTTTGTTGGGTTT+GGG - tig0023178:76611-76630 Msa1406070:three_prime_UTR 40.0%
!!! AGGGTTTTGTTCCATCTATG+AGG + tig0023178:76671-76690 None:intergenic 40.0%
TGGTTCTTGCAAGAACCTTA+GGG + tig0023178:76690-76709 None:intergenic 40.0%
! TTGGTTCTTGCAAGAACCTT+AGG + tig0023178:76691-76710 None:intergenic 40.0%
!!! GGGTTGTTTTGGTGATGAAT+TGG - tig0023178:77105-77124 Msa1406070:CDS 40.0%
!! GGTGGTTTTTCAGATTTTCC+TGG - tig0023178:77292-77311 Msa1406070:intron 40.0%
CCATTCACATCTTTATTCCC+AGG + tig0023178:77313-77332 None:intergenic 40.0%
CCTGGGAATAAAGATGTGAA+TGG - tig0023178:77310-77329 Msa1406070:intron 40.0%
!! TGTGAATGGTGTTGTTTCTG+AGG - tig0023178:77324-77343 Msa1406070:intron 40.0%
!! TTGTTTCTGAGGAAGAGCTT+AGG - tig0023178:77335-77354 Msa1406070:intron 40.0%
TCTTCCTTTGACAACAAAGG+AGG + tig0023178:77421-77440 None:intergenic 40.0%
TGTTGTCAAAGGAAGATTGG+AGG - tig0023178:77425-77444 Msa1406070:intron 40.0%
TCAACAAAGGCTTAAAGGTG+GGG - tig0023178:77450-77469 Msa1406070:intron 40.0%
GGTAACATGACTGATGATAG+TGG - tig0023178:77508-77527 Msa1406070:intron 40.0%
!! AACATGACTGATGATAGTGG+TGG - tig0023178:77511-77530 Msa1406070:intron 40.0%
GTGGAGAATGAAAAGACTAG+AGG - tig0023178:77592-77611 Msa1406070:intron 40.0%
!! TTTGATTGGTTTGCCTAGCT+TGG - tig0023178:77639-77658 Msa1406070:intron 40.0%
!! TTGATTGGTTTGCCTAGCTT+GGG - tig0023178:77640-77659 Msa1406070:intron 40.0%
! GAGCCTTGCTGAAATTTTTC+AGG - tig0023178:77681-77700 Msa1406070:intron 40.0%
! GCTGTTAAGGTTGGTTGATA+TGG - tig0023178:77785-77804 Msa1406070:CDS 40.0%
TTTCTGCTGGGTACAAAAGA+TGG - tig0023178:77839-77858 Msa1406070:CDS 40.0%
TAAACTACTTTCAGGCCACT+TGG - tig0023178:78341-78360 Msa1406070:CDS 40.0%
AAACTACTTTCAGGCCACTT+GGG - tig0023178:78342-78361 Msa1406070:CDS 40.0%
CATCAAAACTGCTGAATGTG+AGG + tig0023178:78384-78403 None:intergenic 40.0%
CACAGAGAAACAGTGAGATA+TGG + tig0023178:78486-78505 None:intergenic 40.0%
!! AAGCTCTGGGTAGAAGAAAA+GGG + tig0023178:78854-78873 None:intergenic 40.0%
!! TAAGCTCTGGGTAGAAGAAA+AGG + tig0023178:78855-78874 None:intergenic 40.0%
AATTACCGGTCATAAGCTCT+GGG + tig0023178:78867-78886 None:intergenic 40.0%
AAATTACCGGTCATAAGCTC+TGG + tig0023178:78868-78887 None:intergenic 40.0%
! CTTATGACCGGTAATTTTGC+AGG - tig0023178:78871-78890 Msa1406070:CDS 40.0%
GCAGCATAAGAATATGAAGC+TGG + tig0023178:79046-79065 None:intergenic 40.0%
TATTCTTATGCTGCTGCACT+AGG - tig0023178:79052-79071 Msa1406070:CDS 40.0%
CTTGCAATATGTTGTGGATC+AGG + tig0023178:79106-79125 None:intergenic 40.0%
CTGATCCACAACATATTGCA+AGG - tig0023178:79104-79123 Msa1406070:CDS 40.0%
AATGTCTCTTCTGACAAGAG+AGG - tig0023178:79166-79185 Msa1406070:intron 40.0%
TGAAAACCATTTGCCATCAC+AGG - tig0023178:79288-79307 Msa1406070:CDS 40.0%
!! TATCTTTTTGGTATGCAGGG+TGG - tig0023178:79340-79359 Msa1406070:CDS 40.0%
TGTGCAGGGACAGATTATTA+AGG + tig0023178:79447-79466 None:intergenic 40.0%
TTAATAATCTGTCCCTGCAC+AGG - tig0023178:79446-79465 Msa1406070:CDS 40.0%
! GCCATATTGGTTAGTCATCA+AGG + tig0023178:79653-79672 None:intergenic 40.0%
CCAAGATTATGCACATCAGA+AGG + tig0023178:79787-79806 None:intergenic 40.0%
CCTTCTGATGTGCATAATCT+TGG - tig0023178:79784-79803 Msa1406070:CDS 40.0%
CTGATGTGCATAATCTTGGT+CGG - tig0023178:79788-79807 Msa1406070:CDS 40.0%
ATGGGAAATCAAATTGCTGG+TGG - tig0023178:79811-79830 Msa1406070:CDS 40.0%
! GCATTGTACTGTGACTTTTG+AGG + tig0023178:80012-80031 None:intergenic 40.0%
TCACAGTACAATGCACAACT+TGG - tig0023178:80018-80037 Msa1406070:CDS 40.0%
TCCAATCACCATGGTTACTA+TGG - tig0023178:80057-80076 Msa1406070:CDS 40.0%
TCCATAGTAACCATGGTGAT+TGG + tig0023178:80061-80080 None:intergenic 40.0%
CCATGGTTACTATGGAAATC+CGG - tig0023178:80065-80084 Msa1406070:CDS 40.0%
TACTATGGAAATCCGGCATA+TGG - tig0023178:80072-80091 Msa1406070:CDS 40.0%
ATTGTGCCTAATTGGACTTC+CGG + tig0023178:80154-80173 None:intergenic 40.0%
! AACAACATGCGTTTTGCTTC+TGG - tig0023178:80180-80199 Msa1406070:CDS 40.0%
AAGCTTTGCTTCTTCTCTGT+TGG - tig0023178:80263-80282 Msa1406070:CDS 40.0%
TTCAGAGAGCTCAAAACACT+TGG + tig0023178:80310-80329 None:intergenic 40.0%
!! TTTGAGCTCTCTGAAATTGC+CGG - tig0023178:80315-80334 Msa1406070:CDS 40.0%
CCTGAATTCAACAACATGTC+CGG + tig0023178:80337-80356 None:intergenic 40.0%
GAAGGCTAAGTGTAAGAACA+TGG + tig0023178:80717-80736 None:intergenic 40.0%
! ACACTTAGCCTTCAGATGTA+TGG - tig0023178:80724-80743 Msa1406070:intron 40.0%
AGTCCATATTGAAAGGACAG+AGG + tig0023178:80850-80869 None:intergenic 40.0%
GAGATGGTTAAAGAGCTTGA+TGG - tig0023178:80911-80930 Msa1406070:intron 40.0%
TAAAGTCGATCGCATCTTCA+GGG + tig0023178:81003-81022 None:intergenic 40.0%
ATAAAGTCGATCGCATCTTC+AGG + tig0023178:81004-81023 None:intergenic 40.0%
TAACTTTCTGCTGTGTTGCA+GGG + tig0023178:81207-81226 None:intergenic 40.0%
ATAACTTTCTGCTGTGTTGC+AGG + tig0023178:81208-81227 None:intergenic 40.0%
TGCAACACAGCAGAAAGTTA+TGG - tig0023178:81207-81226 Msa1406070:intron 40.0%
TTTCTTACTACTCAGCCTAC+TGG - tig0023178:81302-81321 Msa1406070:intron 40.0%
TTTGAAGAACCAACCTCAGA+TGG + tig0023178:81473-81492 None:intergenic 40.0%
! GGTATGCCGTTTAAACATGT+GGG - tig0023178:81586-81605 Msa1406070:intron 40.0%
GATCAGCCCACATGTTTAAA+CGG + tig0023178:81595-81614 None:intergenic 40.0%
CGCTAAATAACAGCATGTAC+TGG - tig0023178:81635-81654 Msa1406070:intron 40.0%
TAACAGCATGTACTGGAACA+TGG - tig0023178:81642-81661 Msa1406070:intron 40.0%
AACAGCATGTACTGGAACAT+GGG - tig0023178:81643-81662 Msa1406070:intron 40.0%
ATTATGGTAGAACGCTCATG+AGG + tig0023178:81672-81691 None:intergenic 40.0%
CCCTGCTAACTCCTTTATTA+TGG + tig0023178:81688-81707 None:intergenic 40.0%
AAAGTTTGCCTCCAATGTTG+TGG - tig0023178:81731-81750 Msa1406070:intron 40.0%
! GCATCTCACTGACTAGTATT+TGG + tig0023178:81791-81810 None:intergenic 40.0%
ATACTAGTCAGTGAGATGCT+TGG - tig0023178:81792-81811 Msa1406070:intron 40.0%
AGTCCAGCTCATGCAATATT+AGG + tig0023178:81999-82018 None:intergenic 40.0%
!! CTTGGTTGATTTGAGTGGTA+AGG - tig0023178:82054-82073 Msa1406070:CDS 40.0%
ATTCACCACGTGTGTTTAAC+TGG - tig0023178:82098-82117 Msa1406070:CDS 40.0%
! GTGTTTAACTGGTTCTCTAG+TGG - tig0023178:82109-82128 Msa1406070:CDS 40.0%
CATCATTGCCTGCATATAAG+AGG + tig0023178:82377-82396 None:intergenic 40.0%
! TTATGTTGTCCAAAAGGTGC+TGG - tig0023178:82414-82433 Msa1406070:CDS 40.0%
!! AACGTGAGTTGATTCTTTCG+CGG - tig0023178:82455-82474 Msa1406070:CDS 40.0%
TGTTGTTGCAGAGAGAAGAA+TGG - tig0023178:82645-82664 Msa1406070:five_prime_UTR 40.0%
TTCAATCAGCGGAAACACAT+AGG + tig0023178:82774-82793 None:intergenic 40.0%
GCACTTGGTCAATTACCCTA+AGG - tig0023178:76450-76469 Msa1406070:three_prime_UTR 45.0%
! AGAGAGGAATTTGAAGCTGG+CGG + tig0023178:76717-76736 None:intergenic 45.0%
! AGGAGAGAGGAATTTGAAGC+TGG + tig0023178:76720-76739 None:intergenic 45.0%
TTGGGAAGAAGACCAGTGAT+TGG - tig0023178:77073-77092 Msa1406070:CDS 45.0%
ACCAGTGATTGGCAATAACG+AGG - tig0023178:77084-77103 Msa1406070:CDS 45.0%
CCAGTGATTGGCAATAACGA+GGG - tig0023178:77085-77104 Msa1406070:CDS 45.0%
! GGCAATAACGAGGGTTGTTT+TGG - tig0023178:77094-77113 Msa1406070:CDS 45.0%
GTTCTTCGAATGCTGTTGGA+GGG - tig0023178:77236-77255 Msa1406070:intron 45.0%
AATGCTGTTGGAGGGTTGTT+TGG - tig0023178:77244-77263 Msa1406070:intron 45.0%
! TCCACCTCCTTTGTTGTCAA+AGG - tig0023178:77414-77433 Msa1406070:intron 45.0%
TCCTTTGACAACAAAGGAGG+TGG + tig0023178:77418-77437 None:intergenic 45.0%
CTGTAGGTGGAATTGGAGAT+AGG - tig0023178:77479-77498 Msa1406070:intron 45.0%
TAGGTGGAATTGGAGATAGG+AGG - tig0023178:77482-77501 Msa1406070:intron 45.0%
GGAATTGGAGATAGGAGGAA+AGG - tig0023178:77487-77506 Msa1406070:intron 45.0%
!! TGACTGATGATAGTGGTGGT+AGG - tig0023178:77515-77534 Msa1406070:intron 45.0%
!!! CGCCACCTGGTTTTAACTTT+AGG - tig0023178:77551-77570 Msa1406070:intron 45.0%
TAGGAAGCAAGAAAGGAGTG+AGG - tig0023178:77570-77589 Msa1406070:intron 45.0%
AGACTAGAGGTTCTGCTGAA+TGG - tig0023178:77605-77624 Msa1406070:intron 45.0%
GACTAGAGGTTCTGCTGAAT+GGG - tig0023178:77606-77625 Msa1406070:intron 45.0%
ACTAGAGGTTCTGCTGAATG+GGG - tig0023178:77607-77626 Msa1406070:intron 45.0%
TTGCTTCTAAGTCCCAAGCT+AGG + tig0023178:77655-77674 None:intergenic 45.0%
! ACAGGCATTACCGAGTCTTT+TGG - tig0023178:78572-78591 Msa1406070:CDS 45.0%
! GCATTACCGAGTCTTTTGGT+AGG - tig0023178:78576-78595 Msa1406070:CDS 45.0%
ACTGAGCCTACCAAAAGACT+CGG + tig0023178:78585-78604 None:intergenic 45.0%
TTCTACCCAGAGCTTATGAC+CGG - tig0023178:78859-78878 Msa1406070:CDS 45.0%
!! ATGCATTACGACTTGCTGGA+CGG + tig0023178:78937-78956 None:intergenic 45.0%
TCGAATGCATTACGACTTGC+TGG + tig0023178:78941-78960 None:intergenic 45.0%
ATAGGTGTGAGACATGGACT+AGG + tig0023178:79133-79152 None:intergenic 45.0%
AGTCCATGTCTCACACCTAT+TGG - tig0023178:79133-79152 Msa1406070:intron 45.0%
! GATCTTGTGGCTGCTTTATC+CGG - tig0023178:79244-79263 Msa1406070:CDS 45.0%
! ATCTTGTGGCTGCTTTATCC+GGG - tig0023178:79245-79264 Msa1406070:CDS 45.0%
TTCTGCTGACAAGTTCATCC+CGG + tig0023178:79266-79285 None:intergenic 45.0%
ACTCAACCTGTGATGGCAAA+TGG + tig0023178:79297-79316 None:intergenic 45.0%
ACATCAGACTCAACCTGTGA+TGG + tig0023178:79304-79323 None:intergenic 45.0%
! TCAGGGCATTTGCAAAGTTC+AGG - tig0023178:79406-79425 Msa1406070:CDS 45.0%
TGCAAAGTTCAGGTAAGAGC+AGG - tig0023178:79416-79435 Msa1406070:CDS 45.0%
! TCACCTACCTCCCATTTTAG+TGG - tig0023178:79523-79542 Msa1406070:CDS 45.0%
TATGGCTTAAGCGGTTATGG+TGG - tig0023178:79607-79626 Msa1406070:CDS 45.0%
ATCAAGGATGTCAATGCTGC+AGG + tig0023178:79637-79656 None:intergenic 45.0%
!! GCAGATTACTGGTGCCATAT+TGG + tig0023178:79666-79685 None:intergenic 45.0%
AAACATCGGTGGCAGATTAC+TGG + tig0023178:79677-79696 None:intergenic 45.0%
! GCAACGTTTTCAAACATCGG+TGG + tig0023178:79688-79707 None:intergenic 45.0%
! GCGGCAACGTTTTCAAACAT+CGG + tig0023178:79691-79710 None:intergenic 45.0%
AATTCTCGAGTCCATTCCAG+GGG + tig0023178:79731-79750 None:intergenic 45.0%
GAATTCTCGAGTCCATTCCA+GGG + tig0023178:79732-79751 None:intergenic 45.0%
AGAATTCTCGAGTCCATTCC+AGG + tig0023178:79733-79752 None:intergenic 45.0%
! GGAATGGACTCGAGAATTCT+TGG - tig0023178:79733-79752 Msa1406070:CDS 45.0%
ATGGACTCGAGAATTCTTGG+AGG - tig0023178:79736-79755 Msa1406070:CDS 45.0%
GAGAATTCTTGGAGGTGGTT+TGG - tig0023178:79744-79763 Msa1406070:CDS 45.0%
TGTGCATAATCTTGGTCGGA+TGG - tig0023178:79792-79811 Msa1406070:CDS 45.0%
GTGCATAATCTTGGTCGGAT+GGG - tig0023178:79793-79812 Msa1406070:CDS 45.0%
CGGATGGGAAATCAAATTGC+TGG - tig0023178:79808-79827 Msa1406070:CDS 45.0%
AAGTAGTTCCTGTCCACAGA+GGG + tig0023178:79928-79947 None:intergenic 45.0%
TCTGTGGACAGGAACTACTT+GGG - tig0023178:79928-79947 Msa1406070:CDS 45.0%
CAGTACAATGCACAACTTGG+TGG - tig0023178:80021-80040 Msa1406070:CDS 45.0%
! GCACAACTTGGTGGTAAATC+AGG - tig0023178:80030-80049 Msa1406070:CDS 45.0%
CCGGATTTCCATAGTAACCA+TGG + tig0023178:80068-80087 None:intergenic 45.0%
GAAATCCGGCATATGGTGTT+GGG - tig0023178:80079-80098 Msa1406070:CDS 45.0%
GTCTTATCCAGGAAGTCCAA+TGG - tig0023178:80104-80123 Msa1406070:CDS 45.0%
TTGGATCCGGAAGTCCAATT+AGG - tig0023178:80145-80164 Msa1406070:CDS 45.0%
!!! TGCGTTTTGCTTCTGGAATG+AGG - tig0023178:80187-80206 Msa1406070:CDS 45.0%
! TCTGGAATGAGGAACTTAGC+TGG - tig0023178:80198-80217 Msa1406070:CDS 45.0%
CTGGAATGAGGAACTTAGCT+GGG - tig0023178:80199-80218 Msa1406070:CDS 45.0%
TGGAATGAGGAACTTAGCTG+GGG - tig0023178:80200-80219 Msa1406070:CDS 45.0%
GCATGTAGATTCCGGGAATA+TGG - tig0023178:80236-80255 Msa1406070:CDS 45.0%
CCGGACATGTTGTTGAATTC+AGG - tig0023178:80334-80353 Msa1406070:CDS 45.0%
! GTCATCAAAGCAAGAGCATG+TGG + tig0023178:80533-80552 None:intergenic 45.0%
! GCTTTGATGACCGATGTCTT+TGG - tig0023178:80542-80561 Msa1406070:CDS 45.0%
GGCCATTGAAGTTGTTGATC+TGG - tig0023178:80877-80896 Msa1406070:intron 45.0%
CGTTGTGTTCGTGATCAGAA+TGG - tig0023178:80944-80963 Msa1406070:intron 45.0%
ACACTCTCAACCCATCCATA+CGG - tig0023178:81052-81071 Msa1406070:intron 45.0%
TGTATCACACGACAACCGTA+TGG + tig0023178:81070-81089 None:intergenic 45.0%
ATACGGTTGTCGTGTGATAC+AGG - tig0023178:81069-81088 Msa1406070:intron 45.0%
AGTACTCTCTGCCATGCAAA+AGG + tig0023178:81169-81188 None:intergenic 45.0%
!! TTTTGCATGGCAGAGAGTAC+TGG - tig0023178:81168-81187 Msa1406070:intron 45.0%
ATGCTAGCACAGGATCAGTA+TGG - tig0023178:81253-81272 Msa1406070:intron 45.0%
GTATGGCAACTACGTTGTTC+AGG - tig0023178:81270-81289 Msa1406070:intron 45.0%
! TCCTTTTGACATGCCATCTG+AGG - tig0023178:81457-81476 Msa1406070:intron 45.0%
ACCTCAGATGGCATGTCAAA+AGG + tig0023178:81461-81480 None:intergenic 45.0%
! TTTGACATGCCATCTGAGGT+TGG - tig0023178:81461-81480 Msa1406070:intron 45.0%
! CGGTATGCCGTTTAAACATG+TGG - tig0023178:81585-81604 Msa1406070:intron 45.0%
ACACTTCTCCACAACATTGG+AGG + tig0023178:81742-81761 None:intergenic 45.0%
CAGACACTTCTCCACAACAT+TGG + tig0023178:81745-81764 None:intergenic 45.0%
ACTAGTATTTGGCGTTCTGC+AGG + tig0023178:81780-81799 None:intergenic 45.0%
! AAGAGGCTCATTTTCATCCG+TGG + tig0023178:81820-81839 None:intergenic 45.0%
GGATGAAAATGAGCCTCTTC+AGG - tig0023178:81821-81840 Msa1406070:intron 45.0%
ATCAAAAGCTTCCGAGACAG+TGG + tig0023178:81922-81941 None:intergenic 45.0%
GATTTGAGTGGTAAGGGACT+CGG - tig0023178:82061-82080 Msa1406070:CDS 45.0%
GAGAACCAGTTAAACACACG+TGG + tig0023178:82106-82125 None:intergenic 45.0%
! ACTGGTTCTCTAGTGGAGAT+AGG - tig0023178:82116-82135 Msa1406070:CDS 45.0%
! CACATGTTTCCAGCACCTTT+TGG + tig0023178:82426-82445 None:intergenic 45.0%
! GTTGATTCTTTCGCGGATCA+AGG - tig0023178:82462-82481 Msa1406070:CDS 45.0%
!! GTAGAGAAACTTGTTGCTGC+TGG - tig0023178:82538-82557 Msa1406070:five_prime_UTR 45.0%
ATGAAGAAGCAGCTTGCACT+AGG + tig0023178:82745-82764 None:intergenic 45.0%
!! ATAAAATAATAATAAAATTC+TGG - tig0023178:76485-76504 Msa1406070:three_prime_UTR 5.0%
!!! TGAAATTAAAATTAAAATTT+TGG - tig0023178:76584-76603 Msa1406070:three_prime_UTR 5.0%
!!! GAAATTAAAATTAAAATTTT+GGG - tig0023178:76585-76604 Msa1406070:three_prime_UTR 5.0%
GGCATTAGTCGGTTAGCACT+TGG - tig0023178:76435-76454 Msa1406070:three_prime_UTR 50.0%
! AATTTGAAGCTGGCGGCGAT+TGG + tig0023178:76710-76729 None:intergenic 50.0%
CCCTCGTTATTGCCAATCAC+TGG + tig0023178:77088-77107 None:intergenic 50.0%
GAATGTTGCTCCGCGAACAA+CGG - tig0023178:77140-77159 Msa1406070:CDS 50.0%
TTCGAAGAACCCTCCACAGT+AGG + tig0023178:77226-77245 None:intergenic 50.0%
GAGGGTTCTTCGAATGCTGT+TGG - tig0023178:77232-77251 Msa1406070:intron 50.0%
GGTTCTTCGAATGCTGTTGG+AGG - tig0023178:77235-77254 Msa1406070:intron 50.0%
AACAAAGGAGGTGGAAGCCT+AGG + tig0023178:77409-77428 None:intergenic 50.0%
TCCAATTCCACCTACAGCTG+AGG + tig0023178:77476-77495 None:intergenic 50.0%
! TCAATGTTTTCGACGCCACC+TGG - tig0023178:77538-77557 Msa1406070:intron 50.0%
GAAGCAAGAAAGGAGTGAGG+TGG - tig0023178:77573-77592 Msa1406070:intron 50.0%
!! TGGGGTGGTGATGGTTTGAT+TGG - tig0023178:77625-77644 Msa1406070:intron 50.0%
! TCAGGCCACTTGGGTTGTAT+AGG - tig0023178:78351-78370 Msa1406070:CDS 50.0%
TACTCTGCCTCAACACTGAG+AGG + tig0023178:78429-78448 None:intergenic 50.0%
!! TGCATTACGACTTGCTGGAC+GGG + tig0023178:78936-78955 None:intergenic 50.0%
GCAGAGTTCGCTCATGTTCA+AGG - tig0023178:78992-79011 Msa1406070:CDS 50.0%
TCTTATGCTGCTGCACTAGG+AGG - tig0023178:79055-79074 Msa1406070:CDS 50.0%
GGAGCCCTTGCAATATGTTG+TGG + tig0023178:79112-79131 None:intergenic 50.0%
CCATGTCTCACACCTATTGG+CGG - tig0023178:79136-79155 Msa1406070:intron 50.0%
ACATTTCTCCCTCCGCCAAT+AGG + tig0023178:79151-79170 None:intergenic 50.0%
GAACGAGTCAGCAGATCTTG+TGG - tig0023178:79231-79250 Msa1406070:CDS 50.0%
CCTCCACTAAAATGGGAGGT+AGG + tig0023178:79529-79548 None:intergenic 50.0%
!! CCTACCTCCCATTTTAGTGG+AGG - tig0023178:79526-79545 Msa1406070:CDS 50.0%
!! ACCTCCCATTTTAGTGGAGG+AGG - tig0023178:79529-79548 Msa1406070:CDS 50.0%
ACCTCCTCCACTAAAATGGG+AGG + tig0023178:79533-79552 None:intergenic 50.0%
GACTCGAGAATTCTTGGAGG+TGG - tig0023178:79739-79758 Msa1406070:CDS 50.0%
! TCTTGGAGGTGGTTTGGCTT+CGG - tig0023178:79750-79769 Msa1406070:CDS 50.0%
! AATTGCTGGTGGTGCTCTTC+AGG - tig0023178:79822-79841 Msa1406070:CDS 50.0%
AGTAGTTCCTGTCCACAGAG+GGG + tig0023178:79927-79946 None:intergenic 50.0%
CAAGTAGTTCCTGTCCACAG+AGG + tig0023178:79929-79948 None:intergenic 50.0%
CTCTGTGGACAGGAACTACT+TGG - tig0023178:79927-79946 Msa1406070:CDS 50.0%
TCAGGCAACTCCAATCACCA+TGG - tig0023178:80048-80067 Msa1406070:CDS 50.0%
GGAAATCCGGCATATGGTGT+TGG - tig0023178:80078-80097 Msa1406070:CDS 50.0%
GACAACCCAACACCATATGC+CGG + tig0023178:80087-80106 None:intergenic 50.0%
! GGTGTTGGGTTGTCTTATCC+AGG - tig0023178:80093-80112 Msa1406070:CDS 50.0%
GAGTTTGCCATTGGACTTCC+TGG + tig0023178:80114-80133 None:intergenic 50.0%
GGAAGTCCAATGGCAAACTC+TGG - tig0023178:80114-80133 Msa1406070:CDS 50.0%
GGAGAACCAGAGTTTGCCAT+TGG + tig0023178:80123-80142 None:intergenic 50.0%
!! GCAAACTCTGGTTCTCCAGT+TGG - tig0023178:80126-80145 Msa1406070:CDS 50.0%
!! TCTGGTTCTCCAGTTGGATC+CGG - tig0023178:80132-80151 Msa1406070:CDS 50.0%
ATTGGACTTCCGGATCCAAC+TGG + tig0023178:80144-80163 None:intergenic 50.0%
AGGAACTTAGCTGGGGTCAT+GGG - tig0023178:80207-80226 Msa1406070:CDS 50.0%
GGACCTTGGCATGTAGATTC+CGG - tig0023178:80228-80247 Msa1406070:CDS 50.0%
GACCTTGGCATGTAGATTCC+GGG - tig0023178:80229-80248 Msa1406070:CDS 50.0%
TTCCCGGAATCTACATGCCA+AGG + tig0023178:80234-80253 None:intergenic 50.0%
!! GTTGGCAGTGCCGATCAATA+TGG - tig0023178:80434-80453 Msa1406070:CDS 50.0%
GCCTTCAGATGTATGGTTGC+CGG - tig0023178:80731-80750 Msa1406070:intron 50.0%
CCTTCAGATGTATGGTTGCC+GGG - tig0023178:80732-80751 Msa1406070:intron 50.0%
TGGTTGCCGGGTTATTCAGA+AGG - tig0023178:80744-80763 Msa1406070:intron 50.0%
CACACGACAACCGTATGGAT+GGG + tig0023178:81065-81084 None:intergenic 50.0%
TCACACGACAACCGTATGGA+TGG + tig0023178:81066-81085 None:intergenic 50.0%
! CTCTACTCCGCCTGATTTTG+TGG - tig0023178:81512-81531 Msa1406070:intron 50.0%
GACGTGACCACAAAATCAGG+CGG + tig0023178:81522-81541 None:intergenic 50.0%
CTGGACGTGACCACAAAATC+AGG + tig0023178:81525-81544 None:intergenic 50.0%
!! GAGAAGTGTCTGACCTTCAG+TGG - tig0023178:81753-81772 Msa1406070:intron 50.0%
CAGTGAGATGCTTGGAACCA+CGG - tig0023178:81800-81819 Msa1406070:intron 50.0%
TGCGACGATGTGCTTTCCAT+AGG + tig0023178:82515-82534 None:intergenic 50.0%
!! GAGAAACTTGTTGCTGCTGG+AGG - tig0023178:82541-82560 Msa1406070:five_prime_UTR 50.0%
TCAGACTCCTCAACCTGCTT+AGG - tig0023178:82672-82691 Msa1406070:five_prime_UTR 50.0%
TCTCTATGTCACGCCTAAGC+AGG + tig0023178:82688-82707 None:intergenic 50.0%
CTTCTTGCCTCCGTTGTTCG+CGG + tig0023178:77153-77172 None:intergenic 55.0%
ATCAGCTCCTCCTACTGTGG+AGG - tig0023178:77213-77232 Msa1406070:intron 55.0%
TCAGCTCCTCCTACTGTGGA+GGG - tig0023178:77214-77233 Msa1406070:intron 55.0%
GAAGAACCCTCCACAGTAGG+AGG + tig0023178:77223-77242 None:intergenic 55.0%
GCTGTTGGAGGGTTGTTTGG+TGG - tig0023178:77247-77266 Msa1406070:intron 55.0%
! GTTGGAGGGTTGTTTGGTGG+CGG - tig0023178:77250-77269 Msa1406070:intron 55.0%
GCCTCAGCTGTAGGTGGAAT+TGG - tig0023178:77472-77491 Msa1406070:intron 55.0%
AGAGGTTCTGCTGAATGGGG+TGG - tig0023178:77610-77629 Msa1406070:intron 55.0%
TCTGCTGAATGGGGTGGTGA+TGG - tig0023178:77616-77635 Msa1406070:intron 55.0%
!! TTACGACTTGCTGGACGGGA+AGG + tig0023178:78932-78951 None:intergenic 55.0%
CCGCCAATAGGTGTGAGACA+TGG + tig0023178:79139-79158 None:intergenic 55.0%
TGTCTCACACCTATTGGCGG+AGG - tig0023178:79139-79158 Msa1406070:intron 55.0%
GTCTCACACCTATTGGCGGA+GGG - tig0023178:79140-79159 Msa1406070:intron 55.0%
ATGCAGGGTGGTCAAGAGCA+CGG - tig0023178:79352-79371 Msa1406070:CDS 55.0%
TAATCTGTCCCTGCACAGGC+AGG - tig0023178:79450-79469 Msa1406070:CDS 55.0%
GGATGCCATCATGGATGCAG+CGG + tig0023178:79710-79729 None:intergenic 55.0%
CATTCCAGGGGATGCCATCA+TGG + tig0023178:79719-79738 None:intergenic 55.0%
CATGATGGCATCCCCTGGAA+TGG - tig0023178:79717-79736 Msa1406070:CDS 55.0%
! CTTGGAGGTGGTTTGGCTTC+GGG - tig0023178:79751-79770 Msa1406070:CDS 55.0%
GAGGACGTCAGAGTATGCTG+CGG - tig0023178:79879-79898 Msa1406070:CDS 55.0%
TGCTCTTAACGACCCCTCTG+TGG - tig0023178:79912-79931 Msa1406070:CDS 55.0%
TTAACGACCCCTCTGTGGAC+AGG - tig0023178:79917-79936 Msa1406070:CDS 55.0%
GAGCTGCAGAAAGCCTACCT+CGG - tig0023178:79973-79992 Msa1406070:CDS 55.0%
AGCTGCAGAAAGCCTACCTC+GGG - tig0023178:79974-79993 Msa1406070:CDS 55.0%
GAGGAACTTAGCTGGGGTCA+TGG - tig0023178:80206-80225 Msa1406070:CDS 55.0%
CCCGGCAACCATACATCTGA+AGG + tig0023178:80735-80754 None:intergenic 55.0%
CGCTGTTAGCATGCTAGCAC+AGG - tig0023178:81243-81262 Msa1406070:intron 55.0%
TGTCACGCCTAAGCAGGTTG+AGG + tig0023178:82682-82701 None:intergenic 55.0%
TGTTGCTCCGCGAACAACGG+AGG - tig0023178:77143-77162 Msa1406070:CDS 60.0%
CGCGAACAACGGAGGCAAGA+AGG - tig0023178:77151-77170 Msa1406070:CDS 60.0%
CGGATCAGCTCCTCCTACTG+TGG - tig0023178:77210-77229 Msa1406070:intron 60.0%
!! TTGTTTGGTGGCGGTGGTGG+TGG - tig0023178:77259-77278 Msa1406070:intron 60.0%
AAAGGTGGGGCCTCAGCTGT+AGG - tig0023178:77463-77482 Msa1406070:intron 60.0%
ACGGGAAGGAAGGCCTGTGA+CGG + tig0023178:78918-78937 None:intergenic 60.0%
!! GACTTGCTGGACGGGAAGGA+AGG + tig0023178:78928-78947 None:intergenic 60.0%
TAGCTCAGCCTGCCTGTGCA+GGG + tig0023178:79461-79480 None:intergenic 60.0%
CGTTGCCGCTGCATCCATGA+TGG - tig0023178:79702-79721 Msa1406070:CDS 60.0%
GCATCCATGATGGCATCCCC+TGG - tig0023178:79712-79731 Msa1406070:CDS 60.0%
CGAGAGAACAGACCCGAGGT+AGG + tig0023178:79989-80008 None:intergenic 60.0%
TAGCTGGGGTCATGGGACCT+TGG - tig0023178:80214-80233 Msa1406070:CDS 60.0%
GCGTTCTGCAGGACCACTGA+AGG + tig0023178:81769-81788 None:intergenic 60.0%
!! GGAGGGTTGTTTGGTGGCGG+TGG - tig0023178:77253-77272 Msa1406070:intron 65.0%
!! GGGTTGTTTGGTGGCGGTGG+TGG - tig0023178:77256-77275 Msa1406070:intron 65.0%
!! TTTGGTGGCGGTGGTGGTGG+TGG - tig0023178:77262-77281 Msa1406070:intron 65.0%
!! GGTGGTGGTGGTGGTGTTGC+TGG - tig0023178:77271-77290 Msa1406070:intron 65.0%
!! GGTGGTGGTGGTGTTGCTGG+TGG - tig0023178:77274-77293 Msa1406070:intron 65.0%
GAGCGTAACACCCCCGTCAC+AGG - tig0023178:78902-78921 Msa1406070:intron 65.0%
GGAAGGAAGGCCTGTGACGG+GGG + tig0023178:78915-78934 None:intergenic 65.0%
GGGAAGGAAGGCCTGTGACG+GGG + tig0023178:78916-78935 None:intergenic 65.0%
CGGGAAGGAAGGCCTGTGAC+GGG + tig0023178:78917-78936 None:intergenic 65.0%
GTAGCTCAGCCTGCCTGTGC+AGG + tig0023178:79462-79481 None:intergenic 65.0%
! GGTGGTTTGGCTTCGGGAGC+TGG - tig0023178:79757-79776 Msa1406070:CDS 65.0%
GAGGCGAGAGAACAGACCCG+AGG + tig0023178:79993-80012 None:intergenic 65.0%
GGTGGGGCCTCAGCTGTAGG+TGG - tig0023178:77466-77485 Msa1406070:intron 70.0%
Chromosome Type Strat End Strand Name
tig0023178 gene 76410 83158 76410 ID=Msa1406070;Name=Msa1406070
tig0023178 mRNA 76410 83158 76410 ID=Msa1406070-mRNA-1;Parent=Msa1406070;Name=Msa1406070-mRNA-1;_AED=0.04;_eAED=0.04;_QI=651|1|1|1|1|1|9|465|1028
tig0023178 exon 76410 76912 76410 ID=Msa1406070-mRNA-1:exon:24378;Parent=Msa1406070-mRNA-1
tig0023178 exon 77006 77180 77006 ID=Msa1406070-mRNA-1:exon:24377;Parent=Msa1406070-mRNA-1
tig0023178 exon 77726 77920 77726 ID=Msa1406070-mRNA-1:exon:24376;Parent=Msa1406070-mRNA-1
tig0023178 exon 78277 78387 78277 ID=Msa1406070-mRNA-1:exon:24375;Parent=Msa1406070-mRNA-1
tig0023178 exon 78478 78690 78478 ID=Msa1406070-mRNA-1:exon:24374;Parent=Msa1406070-mRNA-1
tig0023178 exon 78803 78910 78803 ID=Msa1406070-mRNA-1:exon:24373;Parent=Msa1406070-mRNA-1
tig0023178 exon 78985 79126 78985 ID=Msa1406070-mRNA-1:exon:24372;Parent=Msa1406070-mRNA-1
tig0023178 exon 79213 80675 79213 ID=Msa1406070-mRNA-1:exon:24371;Parent=Msa1406070-mRNA-1
tig0023178 exon 81866 83158 81866 ID=Msa1406070-mRNA-1:exon:24370;Parent=Msa1406070-mRNA-1
tig0023178 five_prime_UTR 82508 83158 82508 ID=Msa1406070-mRNA-1:five_prime_utr;Parent=Msa1406070-mRNA-1
tig0023178 CDS 81866 82507 81866 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 CDS 79213 80675 79213 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 CDS 78985 79126 78985 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 CDS 78803 78910 78803 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 CDS 78478 78690 78478 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 CDS 78277 78387 78277 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 CDS 77726 77920 77726 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 CDS 77006 77180 77006 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 CDS 76875 76912 76875 ID=Msa1406070-mRNA-1:cds;Parent=Msa1406070-mRNA-1
tig0023178 three_prime_UTR 76410 76874 76410 ID=Msa1406070-mRNA-1:three_prime_utr;Parent=Msa1406070-mRNA-1
Gene Sequence

>Msa1406070

ATGTTGTCTGAGTTGGGAAGAAGACCAGTGATTGGCAATAACGAGGGTTGTTTTGGTGATGAATTGGAGAAGGAAATAGGAATGTTGCTCCGCGAACAACGGAGGCAAGAAGGCGATGATCGCGAAAGAGAGTTGAATATATTTAGGAGCGGATCAGCTCCTCCTACTGTGGAGGGTTCTTCGAATGCTGTTGGAGGGTTGTTTGGTGGCGGTGGTGGTGGTGGTGTTGCTGGTGGTTTTTCAGATTTTCCTGGGAATAAAGATGTGAATGGTGTTGTTTCTGAGGAAGAGCTTAGGTCTGATCCAGCTTATCTTCAATACTATTATTCAAATGTGAATTTGAATCCTAGGCTTCCACCTCCTTTGTTGTCAAAGGAAGATTGGAGGTTTCAACAAAGGCTTAAAGGTGGGGCCTCAGCTGTAGGTGGAATTGGAGATAGGAGGAAAGGTAACATGACTGATGATAGTGGTGGTAGGTCAATGTTTTCGACGCCACCTGGTTTTAACTTTAGGAAGCAAGAAAGGAGTGAGGTGGAGAATGAAAAGACTAGAGGTTCTGCTGAATGGGGTGGTGATGGTTTGATTGGTTTGCCTAGCTTGGGACTTAGAAGCAAACAAAAGAGCCTTGCTGAAATTTTTCAGGATGATATGGAGCGTAACACCCCCGTCACAGGCCTTCCTTCCCGTCCAGCAAGTCGTAATGCATTCGATGAAAATGTTGATAAAGTAAATACTTCTGAAGCAGAGTTCGCTCATGTTCAAGGATCATCTGCAACACAAAATATTGGTCTGCCAGCTTCATATTCTTATGCTGCTGCACTAGGAGGATCTTCATTGTCAAGAAGCACTACTCCTGATCCACAACATATTGCAAGGGCTCCTAGTCCATGTCTCACACCTATTGGCGGAGGGAGAAATGTCTCTTCTGACAAGAGAGGCATTGTCAGTCCAGATTCATTTAACGGTGTTTCATCTGGCATGAACGAGTCAGCAGATCTTGTGGCTGCTTTATCCGGGATGAACTTGTCAGCAGAAGATGAAAACCATTTGCCATCACAGGTTGAGTCTGATGTCGATAATCATCAGAGATATCTTTTTGGTATGCAGGGTGGTCAAGAGCACGGCAAGCAACATCCATATCTAAAAAATTCTGAATCAGGGCATTTGCAAAGTTCAGGTAAGAGCAGGTCAGACCTTAATAATCTGTCCCTGCACAGGCAGGCTGAGCTACAAAACTCGACTGCTCCTTTGAATAACTCATATTTCAAAGGATCACCTACCTCCCATTTTAGTGGAGGAGGTAATATGCAAGCTCAATATCAGTCTATAGATGGTATGAATTCATCATTCACTAATTATGGCTTAAGCGGTTATGGTGGAAATCCTGCAGCATTGACATCCTTGATGACTAACCAATATGGCACCAGTAATCTGCCACCGATGTTTGAAAACGTTGCCGCTGCATCCATGATGGCATCCCCTGGAATGGACTCGAGAATTCTTGGAGGTGGTTTGGCTTCGGGAGCTGGTTCTCCTTCTGATGTGCATAATCTTGGTCGGATGGGAAATCAAATTGCTGGTGGTGCTCTTCAGGCTCCGTTTGTTGATCCGATGTATCTTCAGTATATGAGGACGTCAGAGTATGCTGCGGCACAACTCGCTGCTCTTAACGACCCCTCTGTGGACAGGAACTACTTGGGTAATTCGTACATGAATTTACTTGAGCTGCAGAAAGCCTACCTCGGGTCTGTTCTCTCGCCTCAAAAGTCACAGTACAATGCACAACTTGGTGGTAAATCAGGCAACTCCAATCACCATGGTTACTATGGAAATCCGGCATATGGTGTTGGGTTGTCTTATCCAGGAAGTCCAATGGCAAACTCTGGTTCTCCAGTTGGATCCGGAAGTCCAATTAGGCACAATGATCTGAACAACATGCGTTTTGCTTCTGGAATGAGGAACTTAGCTGGGGTCATGGGACCTTGGCATGTAGATTCCGGGAATATGGATGAAAGCTTTGCTTCTTCTCTGTTGGAAGAGTTTAAAAGCAATAAAGCCAAGTGTTTTGAGCTCTCTGAAATTGCCGGACATGTTGTTGAATTCAGTGCCGATCAATATGGAAGCCGATTTATTCAACAGAAGCTTGAAACAGCAACTACAGAAGAAAAAAACATGGTTTATCAGGAAATCATGCCACATGCTCTTGCTTTGATGACCGATGTCTTTGGTAATTATGTGGTTCAAAAGTTTTTTGAGCATGGACTTGCACCCCAGAGAAGAGAATTAGCAAACAAGCTTATTGGCCATGTTCTTACACTTAGCCTTCAGATGTATGGTTGCCGGGTTATTCAGAAGGCCATTGAAGTTGTTGATCTGGATCAGAAAATAGAGATGGTTAAAGAGCTTGATGGTAATATCATGCGTTGTGTTCGTGATCAGAATGGTAATCATGTCATTCAAAAATGTATTGAATGTGTCCCTGAAGATGCGATCGACTTTATTGTTTCAACATTTTTCGATCAAGTTGTGACACTCTCAACCCATCCATACGGTTGTCGTGTGATACAGAGAGTACTGGAGCACTGTGAAAGCCCTGCAACACAGCAGAAAGTTATGGACGAGATTTTAGGCGCTGTTAGCATGCTAGCACAGGATCAGTATGGCAACTACGTTGTTCAGCATGTACTGGAACATGGGAAGCCTCATGAGCGTTCTACCATAATAAAGGAGTTAGCAGGGAAGATAGTTCAAATGAGTCAACAAAAGTTTGCCTCCAATGTTGTGGAGAAGTGTCTGACCTTCAGTGGTCCTGCAGAACGCCAAATACTAGTCAGTGAGATGCTTGGAACCACGGATGAAAATGAGCCTCTTCAGGCAATGATGAAAGATCAATTTGCAAATTATGTTGTCCAAAAGGTGCTGGAAACATGTGACGACCATCAACGTGAGTTGATTCTTTCGCGGATCAAGGTTCATTTGAACGCATTGAAAAAGTATACCTATGGAAAGCACATCGTCGCACGTGTAGAGAAACTTGTTGCTGCTGGAGAGAGAAGAATGGCTGCTCAGACTCCTCAACCTGCTTAG
Protein sequence

>Msa1406070

MLSELGRRPVIGNNEGCFGDELEKEIGMLLREQRRQEGDDRERELNIFRSGSAPPTVEGSSNAVGGLFGGGGGGGVAGGFSDFPGNKDVNGVVSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASAVGGIGDRRKGNMTDDSGGRSMFSTPPGFNFRKQERSEVENEKTRGSAEWGGDGLIGLPSLGLRSKQKSLAEIFQDDMERNTPVTGLPSRPASRNAFDENVDKVNTSEAEFAHVQGSSATQNIGLPASYSYAAALGGSSLSRSTTPDPQHIARAPSPCLTPIGGGRNVSSDKRGIVSPDSFNGVSSGMNESADLVAALSGMNLSAEDENHLPSQVESDVDNHQRYLFGMQGGQEHGKQHPYLKNSESGHLQSSGKSRSDLNNLSLHRQAELQNSTAPLNNSYFKGSPTSHFSGGGNMQAQYQSIDGMNSSFTNYGLSGYGGNPAALTSLMTNQYGTSNLPPMFENVAAASMMASPGMDSRILGGGLASGAGSPSDVHNLGRMGNQIAGGALQAPFVDPMYLQYMRTSEYAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSVLSPQKSQYNAQLGGKSGNSNHHGYYGNPAYGVGLSYPGSPMANSGSPVGSGSPIRHNDLNNMRFASGMRNLAGVMGPWHVDSGNMDESFASSLLEEFKSNKAKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAPQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEKCLTFSGPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMAAQTPQPA*