AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0161200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0161200 MtrunA17_Chr1g0174481 96.667 180 6 0 1 180 314 493 7.04e-128 371
Msa0161200 MtrunA17_Chr1g0174471 81.111 180 34 0 1 180 335 514 1.36e-110 328
Msa0161200 MtrunA17_Chr1g0174441 81.111 180 34 0 1 180 341 520 9.77e-106 315
Msa0161200 MtrunA17_Chr8g0362701 79.558 181 36 1 1 180 318 498 7.76e-105 312
Msa0161200 MtrunA17_Chr8g0362481 77.901 181 39 1 1 180 249 429 2.11e-104 309
Msa0161200 MtrunA17_Chr1g0174451 78.333 180 39 0 1 180 320 499 2.66e-102 306
Msa0161200 MtrunA17_Chr1g0174461 75.556 180 44 0 1 180 319 498 2.93e-100 300
Msa0161200 MtrunA17_Chr7g0258221 67.403 181 58 1 1 180 318 498 1.24e-87 268
Msa0161200 MtrunA17_Chr3g0084921 59.783 184 70 2 1 180 321 504 2.24e-76 239
Msa0161200 MtrunA17_Chr1g0174431 52.941 187 81 2 1 180 13 199 7.84e-69 210
Msa0161200 MtrunA17_Chr4g0030711 47.368 190 90 3 1 180 325 514 9.27e-64 207
Msa0161200 MtrunA17_Chr1g0207841 47.872 188 89 2 1 180 327 513 4.28e-63 205
Msa0161200 MtrunA17_Chr7g0235551 51.613 186 82 3 1 179 316 500 9.44e-63 204
Msa0161200 MtrunA17_Chr7g0224551 47.396 192 88 2 2 180 311 502 1.03e-61 201
Msa0161200 MtrunA17_Chr7g0224561 46.875 192 89 2 2 180 311 502 8.54e-61 199
Msa0161200 MtrunA17_Chr4g0030701 44.974 189 94 3 1 179 322 510 6.98e-60 197
Msa0161200 MtrunA17_Chr4g0046321 45.596 193 91 2 2 180 314 506 1.07e-58 193
Msa0161200 MtrunA17_Chr4g0046351 45.078 193 92 2 2 180 314 506 1.75e-58 193
Msa0161200 MtrunA17_Chr4g0046331 45.641 195 90 2 2 180 314 508 3.73e-58 192
Msa0161200 MtrunA17_Chr8g0351801 45.026 191 94 3 1 180 322 512 6.18e-58 191
Msa0161200 MtrunA17_Chr7g0258211 43.386 189 96 2 1 180 317 503 1.36e-55 185
Msa0161200 MtrunA17_Chr8g0344181 46.995 183 91 3 1 179 319 499 5.94e-55 183
Msa0161200 MtrunA17_Chr3g0086661 46.032 189 96 3 2 184 316 504 4.02e-54 181
Msa0161200 MtrunA17_Chr3g0086651 46.739 184 92 3 2 179 316 499 9.03e-54 180
Msa0161200 MtrunA17_Chr8g0390881 43.299 194 102 4 1 188 317 508 1.87e-51 174
Msa0161200 MtrunA17_Chr1g0164211 44.022 184 97 3 1 180 307 488 1.96e-51 174
Msa0161200 MtrunA17_Chr8g0344151 43.169 183 98 3 1 179 317 497 2.59e-50 171
Msa0161200 MtrunA17_Chr3g0116741 42.781 187 100 3 1 182 328 512 2.86e-50 171
Msa0161200 MtrunA17_Chr4g0061381 44.324 185 97 3 2 180 313 497 3.35e-50 171
Msa0161200 MtrunA17_Chr4g0058281 42.935 184 98 3 1 179 326 507 1.39e-49 169
Msa0161200 MtrunA17_Chr5g0395331 45.963 161 84 2 1 160 317 475 1.06e-48 167
Msa0161200 MtrunA17_Chr1g0160861 43.716 183 97 3 1 179 151 331 1.32e-48 162
Msa0161200 MtrunA17_Chr8g0390871 40.722 194 107 4 1 188 39 230 1.48e-48 159
Msa0161200 MtrunA17_Chr5g0395381 47.205 161 82 2 1 160 285 443 1.60e-48 166
Msa0161200 MtrunA17_Chr8g0344191 43.478 184 97 4 1 179 350 531 4.95e-48 166
Msa0161200 MtrunA17_Chr4g0039391 43.646 181 98 2 1 180 316 493 5.21e-48 165
Msa0161200 MtrunA17_Chr5g0401691 42.703 185 100 3 1 184 326 505 5.23e-48 165
Msa0161200 MtrunA17_Chr3g0086691 40.000 190 108 3 1 184 315 504 5.54e-48 165
Msa0161200 MtrunA17_Chr3g0094171 45.055 182 97 3 1 179 319 500 7.15e-48 165
Msa0161200 MtrunA17_Chr3g0116681 45.570 158 83 2 1 157 316 471 1.13e-47 164
Msa0161200 MtrunA17_Chr3g0094231 43.646 181 100 2 1 179 312 492 1.19e-47 164
Msa0161200 MtrunA17_Chr4g0053621 42.222 180 96 2 1 179 315 487 1.28e-47 164
Msa0161200 MtrunA17_Chr5g0395321 48.101 158 79 2 1 157 310 465 1.32e-47 164
Msa0161200 MtrunA17_Chr2g0314721 45.455 165 86 3 1 163 321 483 2.62e-47 163
Msa0161200 MtrunA17_Chr4g0035921 41.530 183 103 2 1 180 326 507 3.09e-47 163
Msa0161200 MtrunA17_Chr5g0405001 42.935 184 99 3 1 180 326 507 3.11e-47 163
Msa0161200 MtrunA17_Chr4g0039901 41.848 184 99 4 1 179 312 492 9.44e-47 161
Msa0161200 MtrunA17_Chr4g0052881 43.243 185 97 3 1 184 312 489 1.11e-46 161
Msa0161200 MtrunA17_Chr1g0160851 43.716 183 97 3 1 179 310 490 1.26e-46 161
Msa0161200 MtrunA17_Chr4g0046681 41.667 180 104 1 1 179 43 222 1.29e-46 154
Msa0161200 MtrunA17_Chr1g0213671 43.478 184 97 4 1 179 319 500 1.40e-46 161
Msa0161200 MtrunA17_Chr8g0356001 41.304 184 100 4 1 179 319 499 1.77e-46 161
Msa0161200 MtrunA17_Chr2g0310351 41.304 184 102 3 1 180 13 194 2.37e-46 152
Msa0161200 MtrunA17_Chr2g0310391 42.935 184 99 3 1 180 306 487 3.91e-46 160
Msa0161200 MtrunA17_Chr5g0430071 41.206 199 108 5 1 192 169 365 4.03e-46 157
Msa0161200 MtrunA17_Chr6g0458561 40.722 194 112 2 1 193 340 531 4.64e-46 160
Msa0161200 MtrunA17_Chr2g0314781 43.210 162 88 3 5 164 1 160 7.37e-46 150
Msa0161200 MtrunA17_Chr5g0430131 44.022 184 96 4 1 179 315 496 9.30e-46 159
Msa0161200 MtrunA17_Chr5g0445421 41.436 181 100 3 3 179 368 546 1.08e-45 159
Msa0161200 MtrunA17_Chr8g0382901 42.391 184 100 3 1 180 288 469 1.32e-45 162
Msa0161200 MtrunA17_Chr8g0382901 41.451 193 105 4 1 187 767 957 2.17e-43 156
Msa0161200 MtrunA17_Chr4g0052861 38.889 180 102 2 1 179 311 483 3.05e-45 157
Msa0161200 MtrunA17_Chr8g0339311 40.884 181 105 2 1 179 334 514 3.35e-45 158
Msa0161200 MtrunA17_Chr4g0056951 39.227 181 107 2 1 180 324 502 3.73e-45 157
Msa0161200 MtrunA17_Chr5g0431591 39.227 181 104 3 3 179 133 311 5.74e-45 152
Msa0161200 MtrunA17_Chr2g0304871 41.573 178 103 1 3 179 329 506 6.03e-45 157
Msa0161200 MtrunA17_Chr4g0011921 39.572 187 107 3 3 185 311 495 6.90e-45 156
Msa0161200 MtrunA17_Chr4g0057001 39.779 181 106 2 1 180 329 507 7.11e-45 157
Msa0161200 MtrunA17_Chr5g0431641 39.779 181 103 3 3 179 315 493 7.62e-45 156
Msa0161200 MtrunA17_Chr7g0265611 39.791 191 110 3 1 187 329 518 7.90e-45 157
Msa0161200 MtrunA17_Chr5g0430081 41.206 199 108 5 1 192 314 510 8.42e-45 156
Msa0161200 MtrunA17_Chr2g0310381 42.391 184 100 3 1 180 306 487 8.55e-45 156
Msa0161200 MtrunA17_Chr7g0246121 41.176 187 102 4 1 182 313 496 8.95e-45 156
Msa0161200 MtrunA17_Chr4g0058231 40.884 181 104 2 1 180 314 492 1.10e-44 156
Msa0161200 MtrunA17_Chr6g0451811 40.000 180 107 1 1 179 17 196 1.39e-44 149
Msa0161200 MtrunA17_Chr7g0246221 42.781 187 99 4 1 182 316 499 1.39e-44 156
Msa0161200 MtrunA17_Chr8g0339331 41.111 180 105 1 1 179 327 506 1.53e-44 156
Msa0161200 MtrunA17_Chr5g0445461 42.458 179 97 3 3 177 315 491 2.22e-44 155
Msa0161200 MtrunA17_Chr2g0314731 43.373 166 90 3 1 164 310 473 2.29e-44 155
Msa0161200 MtrunA17_Chr4g0046661 44.444 171 94 1 10 179 46 216 2.63e-44 148
Msa0161200 MtrunA17_Chr3g0101721 38.587 184 107 3 2 181 317 498 2.91e-44 155
Msa0161200 MtrunA17_Chr5g0401681 42.308 182 93 3 1 179 311 483 3.57e-44 154
Msa0161200 MtrunA17_Chr4g0058261 39.459 185 104 3 1 179 344 526 3.76e-44 155
Msa0161200 MtrunA17_Chr4g0011851 39.894 188 105 4 3 185 30 214 4.38e-44 147
Msa0161200 MtrunA17_Chr4g0011961 39.894 188 105 4 3 185 310 494 8.51e-44 154
Msa0161200 MtrunA17_Chr4g0058211 38.462 182 108 3 1 180 31 210 9.26e-44 147
Msa0161200 MtrunA17_Chr6g0451691 43.333 180 101 1 1 179 340 519 1.06e-43 154
Msa0161200 MtrunA17_Chr3g0101731 38.919 185 107 3 1 181 314 496 1.07e-43 154
Msa0161200 MtrunA17_Chr1g0176831 42.771 166 91 3 1 164 340 503 1.15e-43 154
Msa0161200 MtrunA17_Chr1g0156101 40.341 176 98 3 3 173 326 499 1.28e-43 153
Msa0161200 MtrunA17_Chr4g0024771 39.779 181 103 3 3 179 315 493 1.92e-43 153
Msa0161200 MtrunA17_Chr1g0205361 41.530 183 101 3 1 179 310 490 1.98e-43 152
Msa0161200 MtrunA17_Chr6g0451751 41.111 180 105 1 1 179 336 515 2.35e-43 153
Msa0161200 MtrunA17_Chr5g0445441 40.331 181 102 3 3 179 356 534 2.46e-43 153
Msa0161200 MtrunA17_Chr4g0011941 38.122 181 106 3 3 179 15 193 3.38e-43 144
Msa0161200 MtrunA17_Chr4g0011901 40.426 188 104 4 3 185 311 495 8.12e-43 151
Msa0161200 MtrunA17_Chr5g0431671 38.122 181 106 3 3 179 316 494 1.15e-42 150
Msa0161200 MtrunA17_Chr5g0431511 36.464 181 109 3 3 179 317 495 1.62e-42 150
Msa0161200 MtrunA17_Chr5g0430031 38.191 199 114 5 1 192 316 512 1.82e-42 150
Msa0161200 MtrunA17_Chr6g0451781 40.000 180 107 1 1 179 369 548 2.15e-42 151
Msa0161200 MtrunA17_Chr6g0466901 41.341 179 103 2 3 179 330 508 2.18e-42 150
Msa0161200 MtrunA17_Chr5g0445531 38.122 181 106 3 3 179 314 492 2.61e-42 150
Msa0161200 MtrunA17_Chr6g0451641 40.000 180 107 1 1 179 329 508 2.65e-42 150
Msa0161200 MtrunA17_Chr1g0162811 41.935 155 88 1 3 157 316 468 2.79e-42 150
Msa0161200 MtrunA17_Chr5g0403331 40.437 183 103 3 1 179 317 497 4.74e-42 149
Msa0161200 MtrunA17_Chr6g0451771 38.333 180 110 1 1 179 34 213 6.21e-42 142
Msa0161200 MtrunA17_Chr6g0463621 38.503 187 108 3 1 181 13 198 6.50e-42 141
Msa0161200 MtrunA17_Chr7g0255531 38.251 183 107 3 1 179 309 489 6.88e-42 149
Msa0161200 MtrunA17_Chr5g0430101 39.674 184 104 4 1 179 313 494 7.92e-42 149
Msa0161200 MtrunA17_Chr5g0419691 39.362 188 106 4 3 185 311 495 1.17e-41 148
Msa0161200 MtrunA17_Chr8g0372251 40.984 183 104 3 1 180 318 499 1.42e-41 148
Msa0161200 MtrunA17_Chr3g0101611 41.209 182 101 4 2 179 317 496 1.43e-41 148
Msa0161200 MtrunA17_Chr4g0047641 40.000 185 103 4 1 180 329 510 1.69e-41 148
Msa0161200 MtrunA17_Chr5g0446161 38.462 182 107 2 1 179 314 493 1.85e-41 147
Msa0161200 MtrunA17_Chr6g0484811 39.175 194 109 5 1 187 317 508 2.05e-41 147
Msa0161200 MtrunA17_Chr4g0011981 38.298 188 108 4 3 185 311 495 2.14e-41 147
Msa0161200 MtrunA17_Chr7g0246151 37.433 187 109 4 1 182 315 498 2.26e-41 147
Msa0161200 MtrunA17_Chr4g0058191 38.462 182 108 3 1 180 303 482 2.70e-41 147
Msa0161200 MtrunA17_Chr2g0296651 38.333 180 103 2 1 179 311 483 3.78e-41 147
Msa0161200 MtrunA17_Chr4g0008101 40.556 180 106 1 1 179 336 515 4.04e-41 147
Msa0161200 MtrunA17_Chr6g0472311 39.459 185 105 3 1 180 329 511 4.16e-41 147
Msa0161200 MtrunA17_Chr5g0402981 37.569 181 111 1 1 179 4 184 4.37e-41 139
Msa0161200 MtrunA17_Chr4g0047661 40.541 185 102 4 1 180 330 511 4.41e-41 147
Msa0161200 MtrunA17_Chr5g0445381 39.227 181 104 3 3 179 346 524 4.96e-41 147
Msa0161200 MtrunA17_Chr5g0445451 38.122 181 106 3 3 179 315 493 4.98e-41 146
Msa0161200 MtrunA17_Chr4g0047691 40.000 185 103 4 1 180 328 509 5.15e-41 146
Msa0161200 MtrunA17_Chr5g0446151 37.912 182 108 2 1 179 315 494 5.83e-41 146
Msa0161200 MtrunA17_Chr6g0466331 39.873 158 92 2 1 157 314 469 6.15e-41 146
Msa0161200 MtrunA17_Chr6g0463791 40.107 187 105 3 1 181 309 494 6.33e-41 146
Msa0161200 MtrunA17_Chr4g0047631 39.130 184 106 3 1 180 325 506 6.92e-41 146
Msa0161200 MtrunA17_Chr6g0465511 39.873 158 92 2 1 157 314 469 7.03e-41 146
Msa0161200 MtrunA17_Chr5g0403321 41.026 156 89 2 3 157 321 474 7.25e-41 146
Msa0161200 MtrunA17_Chr3g0082701 41.011 178 104 1 3 179 339 516 7.62e-41 146
Msa0161200 MtrunA17_Chr4g0076161 43.478 161 86 2 1 157 312 471 8.02e-41 145
Msa0161200 MtrunA17_Chr3g0101631 42.405 158 88 2 1 157 309 464 8.14e-41 145
Msa0161200 MtrunA17_Chr7g0254641 38.919 185 107 4 2 180 324 508 1.03e-40 145
Msa0161200 MtrunA17_Chr3g0101581 38.251 183 107 4 1 179 315 495 1.22e-40 145
Msa0161200 MtrunA17_Chr5g0431501 39.103 156 92 2 3 157 317 470 1.33e-40 145
Msa0161200 MtrunA17_Chr5g0431461 39.103 156 92 2 3 157 317 470 1.33e-40 145
Msa0161200 MtrunA17_Chr5g0430091 39.674 184 104 4 1 179 316 497 1.76e-40 145
Msa0161200 MtrunA17_Chr3g0101811 38.378 185 108 4 1 181 329 511 1.88e-40 145
Msa0161200 MtrunA17_Chr4g0046701 43.333 150 84 1 31 179 1 150 1.90e-40 136
Msa0161200 MtrunA17_Chr6g0466941 44.444 153 83 2 3 153 331 483 2.03e-40 145
Msa0161200 MtrunA17_Chr1g0205371 44.262 183 96 3 1 179 311 491 2.09e-40 144
Msa0161200 MtrunA17_Chr8g0361471 39.873 158 92 2 1 157 314 469 2.21e-40 144
Msa0161200 MtrunA17_Chr5g0403351 37.705 183 108 3 1 179 316 496 2.67e-40 144
Msa0161200 MtrunA17_Chr3g0101621 42.405 158 89 2 3 159 305 461 2.94e-40 144
Msa0161200 MtrunA17_Chr6g0451741 40.556 180 106 1 1 179 358 537 9.43e-40 144
Msa0161200 MtrunA17_Chr3g0101571 38.798 183 106 3 1 179 312 492 9.75e-40 143
Msa0161200 MtrunA17_Chr4g0046631 40.936 171 100 1 10 179 340 510 1.15e-39 143
Msa0161200 MtrunA17_Chr4g0011871 37.766 188 109 4 3 185 312 496 1.16e-39 142
Msa0161200 MtrunA17_Chr3g0101591 38.798 183 106 4 1 179 51 231 1.39e-39 136
Msa0161200 MtrunA17_Chr6g0484841 36.216 185 111 4 1 180 316 498 1.44e-39 142
Msa0161200 MtrunA17_Chr6g0463801 41.040 173 98 3 1 171 310 480 1.64e-39 142
Msa0161200 MtrunA17_Chr8g0355961 41.848 184 99 4 1 179 319 499 1.66e-39 142
Msa0161200 MtrunA17_Chr2g0296661 40.556 180 99 2 1 179 316 488 1.76e-39 142
Msa0161200 MtrunA17_Chr7g0218611 37.838 185 110 2 3 184 316 498 3.38e-39 141
Msa0161200 MtrunA17_Chr8g0346261 39.267 191 106 4 1 184 356 543 3.68e-39 142
Msa0161200 MtrunA17_Chr3g0101601 37.569 181 108 3 3 179 311 490 4.05e-39 141
Msa0161200 MtrunA17_Chr1g0200961 42.308 182 99 3 2 179 311 490 5.18e-39 141
Msa0161200 MtrunA17_Chr4g0020041 38.122 181 106 3 3 179 317 495 5.22e-39 141
Msa0161200 MtrunA17_Chr4g0017411 40.588 170 89 3 1 167 299 459 6.49e-39 140
Msa0161200 MtrunA17_Chr3g0101671 39.744 156 91 2 3 157 320 473 8.61e-39 140
Msa0161200 MtrunA17_Chr7g0218601 42.581 155 85 2 3 157 317 467 1.02e-38 140
Msa0161200 MtrunA17_Chr4g0052851 37.569 181 104 3 1 179 302 475 1.07e-38 140
Msa0161200 MtrunA17_Chr6g0451681 37.222 180 112 1 1 179 289 468 1.22e-38 139
Msa0161200 MtrunA17_Chr3g0101701 40.000 160 93 2 1 159 318 475 1.76e-38 139
Msa0161200 MtrunA17_Chr4g0058201 39.459 185 105 3 1 180 305 487 2.82e-38 139
Msa0161200 MtrunA17_Chr3g0101711 39.873 158 92 2 1 157 317 472 2.84e-38 139
Msa0161200 MtrunA17_Chr5g0446101 36.943 157 97 1 1 157 127 281 3.93e-38 135
Msa0161200 MtrunA17_Chr5g0445351 38.323 167 97 3 17 179 52 216 4.87e-38 132
Msa0161200 MtrunA17_Chr1g0200951 37.705 183 109 2 2 179 339 521 5.00e-38 139
Msa0161200 MtrunA17_Chr3g0086681 42.484 153 82 3 33 179 9 161 6.84e-38 130
Msa0161200 MtrunA17_Chr5g0423621 39.444 180 99 5 5 179 1 175 2.38e-37 129
Msa0161200 MtrunA17_Chr1g0156061 37.640 178 104 3 3 175 282 457 3.21e-37 135
Msa0161200 MtrunA17_Chr3g0101741 35.484 186 107 5 1 181 241 418 3.71e-37 135
Msa0161200 MtrunA17_Chr5g0430151 40.000 170 95 4 15 179 1 168 8.11e-37 127
Msa0161200 MtrunA17_Chr1g0156081 37.640 178 104 3 3 175 350 525 8.42e-37 135
Msa0161200 MtrunA17_Chr5g0419451 37.363 182 110 2 1 180 332 511 8.96e-37 135
Msa0161200 MtrunA17_Chr4g0030761 40.789 152 63 3 40 180 1 136 1.84e-36 125
Msa0161200 MtrunA17_Chr1g0198191 41.401 157 89 3 1 155 328 483 2.24e-36 134
Msa0161200 MtrunA17_Chr3g0101661 38.125 160 96 2 1 159 317 474 2.82e-36 134
Msa0161200 MtrunA17_Chr5g0432751 39.610 154 92 1 1 153 316 469 3.89e-36 133
Msa0161200 MtrunA17_Chr7g0246181 37.968 187 108 4 1 182 315 498 5.48e-36 132
Msa0161200 MtrunA17_Chr8g0377341 38.122 181 107 3 1 179 341 518 2.46e-35 131
Msa0161200 MtrunA17_Chr4g0011881 41.667 156 88 2 3 157 311 464 4.49e-35 130
Msa0161200 MtrunA17_Chr3g0101651 38.750 160 95 2 1 159 318 475 5.99e-35 130
Msa0161200 MtrunA17_Chr1g0197871 36.025 161 99 3 1 160 309 466 6.48e-35 129
Msa0161200 MtrunA17_Chr1g0197881 36.095 169 100 4 1 168 308 469 1.38e-34 129
Msa0161200 MtrunA17_Chr1g0197891 36.095 169 100 4 1 168 309 470 1.38e-34 129
Msa0161200 MtrunA17_Chr1g0197851 36.095 169 100 4 1 168 309 470 1.38e-34 129
Msa0161200 MtrunA17_Chr3g0101801 38.043 184 108 4 1 180 321 502 1.76e-34 129
Msa0161200 MtrunA17_Chr5g0445761 38.608 158 94 2 1 157 13 168 2.29e-34 122
Msa0161200 MtrunA17_Chr3g0101691 35.152 165 103 3 1 164 318 479 3.39e-34 128
Msa0161200 MtrunA17_Chr5g0406651 41.026 156 89 2 3 157 312 465 4.33e-34 127
Msa0161200 MtrunA17_Chr5g0409051 36.667 180 111 3 3 179 322 501 1.05e-33 126
Msa0161200 MtrunA17_Chr1g0167321 39.011 182 103 4 3 179 315 493 1.29e-33 126
Msa0161200 MtrunA17_Chr5g0430041 37.107 159 93 4 15 168 1 157 3.00e-33 118
Msa0161200 MtrunA17_Chr8g0387101 37.766 188 107 6 1 179 313 499 3.10e-33 125
Msa0161200 MtrunA17_Chr3g0101751 36.216 185 112 4 1 181 321 503 3.58e-33 125
Msa0161200 MtrunA17_Chr3g0101821 37.838 185 109 3 1 181 314 496 3.79e-33 125
Msa0161200 MtrunA17_Chr7g0246131 37.566 189 110 4 1 184 317 502 1.11e-32 124
Msa0161200 MtrunA17_Chr1g0162801 38.122 181 106 3 3 179 318 496 1.55e-32 123
Msa0161200 MtrunA17_Chr3g0117301 42.500 120 66 2 40 158 1 118 1.77e-32 114
Msa0161200 MtrunA17_Chr5g0445371 34.831 178 87 4 6 179 71 223 2.87e-32 118
Msa0161200 MtrunA17_Chr8g0364651 35.870 184 113 4 1 179 308 491 3.21e-32 122
Msa0161200 MtrunA17_Chr3g0101761 36.216 185 112 4 1 181 314 496 5.49e-32 122
Msa0161200 MtrunA17_Chr8g0357421 34.595 185 115 3 1 181 314 496 9.30e-32 121
Msa0161200 MtrunA17_Chr3g0101831 35.135 185 114 3 1 181 315 497 9.77e-32 121
Msa0161200 MtrunA17_Chr1g0210091 36.994 173 103 3 1 168 346 517 1.07e-31 121
Msa0161200 MtrunA17_Chr8g0370651 34.536 194 114 3 1 181 335 528 1.19e-31 121
Msa0161200 MtrunA17_Chr8g0357431 35.519 183 112 3 1 179 315 495 7.25e-31 119
Msa0161200 MtrunA17_Chr8g0370641 35.519 183 114 4 1 180 331 512 7.92e-31 119
Msa0161200 MtrunA17_Chr2g0280261 39.744 156 91 2 1 155 307 460 1.55e-30 118
Msa0161200 MtrunA17_Chr2g0280081 36.559 186 110 4 1 179 813 997 1.81e-30 119
Msa0161200 MtrunA17_Chr2g0280081 35.326 184 111 4 1 177 312 494 5.06e-28 112
Msa0161200 MtrunA17_Chr5g0445361 43.548 124 65 2 59 179 9 130 5.38e-30 108
Msa0161200 MtrunA17_Chr3g0101541 41.803 122 68 2 37 157 1 120 6.06e-30 108
Msa0161200 MtrunA17_Chr4g0028321 39.683 126 72 2 58 180 27 151 6.94e-30 109
Msa0161200 MtrunA17_Chr5g0444981 36.025 161 99 3 1 160 23 180 9.87e-30 110
Msa0161200 MtrunA17_Chr3g0105761 33.333 186 120 3 1 184 12 195 1.31e-29 110
Msa0161200 MtrunA17_Chr2g0280011 36.022 186 111 5 1 179 20 204 1.43e-29 110
Msa0161200 MtrunA17_Chr3g0107551 34.591 159 102 2 1 157 17 175 3.90e-29 108
Msa0161200 MtrunA17_Chr3g0107541 35.032 157 100 2 1 155 338 494 7.27e-29 113
Msa0161200 MtrunA17_Chr5g0413911 34.783 184 114 4 1 179 339 521 7.54e-29 113
Msa0161200 MtrunA17_Chr2g0280061 35.484 186 112 5 1 179 20 204 2.00e-28 107
Msa0161200 MtrunA17_Chr2g0280121 34.946 186 113 4 1 179 318 502 6.31e-28 110
Msa0161200 MtrunA17_Chr3g0107611 35.897 156 98 2 2 155 344 499 6.67e-28 110
Msa0161200 MtrunA17_Chr8g0364631 35.176 199 112 6 1 185 310 505 3.71e-27 108
Msa0161200 MtrunA17_Chr2g0280071 33.333 186 116 4 1 179 345 529 1.35e-26 107
Msa0161200 MtrunA17_Chr8g0383801 62.857 70 26 0 88 157 1 70 2.60e-26 98.2
Msa0161200 MtrunA17_Chr6g0477081 43.000 100 56 1 1 99 143 242 4.53e-26 101
Msa0161200 MtrunA17_Chr2g0334021 34.239 184 115 5 2 184 318 496 1.35e-25 104
Msa0161200 MtrunA17_Chr3g0116731 37.931 145 75 5 42 185 3 133 1.64e-25 97.4
Msa0161200 MtrunA17_Chr5g0430111 44.643 112 60 2 1 110 316 427 2.49e-25 102
Msa0161200 MtrunA17_Chr4g0074581 33.880 183 116 5 1 179 354 535 2.79e-25 103
Msa0161200 MtrunA17_Chr4g0076171 34.177 158 78 3 5 157 1 137 2.86e-25 97.8
Msa0161200 MtrunA17_Chr8g0372591 37.692 130 78 2 1 127 15 144 9.82e-25 95.5
Msa0161200 MtrunA17_Chr2g0280041 34.409 186 114 5 1 179 344 528 1.06e-24 102
Msa0161200 MtrunA17_Chr5g0396521 30.108 186 102 3 1 159 360 544 7.94e-22 93.6
Msa0161200 MtrunA17_Chr0c19g0493771 31.013 158 108 1 1 158 465 621 1.52e-21 92.8
Msa0161200 MtrunA17_Chr8g0371761 34.247 146 83 3 8 140 1 146 9.05e-21 85.1
Msa0161200 MtrunA17_Chr1g0203141 32.086 187 115 6 1 182 334 513 1.11e-18 84.3
Msa0161200 MtrunA17_Chr1g0151221 30.380 158 104 3 11 167 353 505 1.31e-18 84.3
Msa0161200 MtrunA17_Chr5g0429651 32.796 186 110 6 1 173 312 495 3.15e-18 83.2
Msa0161200 MtrunA17_Chr6g0472171 34.328 134 81 3 46 174 21 152 4.00e-18 78.6
Msa0161200 MtrunA17_Chr3g0135841 28.902 173 119 3 11 181 361 531 1.81e-17 80.9
Msa0161200 MtrunA17_Chr8g0351401 29.016 193 119 6 1 179 315 503 2.65e-17 80.5
Msa0161200 MtrunA17_Chr1g0203151 31.016 187 117 6 1 182 330 509 4.45e-17 79.7
Msa0161200 MtrunA17_Chr1g0163451 33.129 163 102 5 1 157 336 497 1.08e-16 78.6
Msa0161200 MtrunA17_Chr1g0204271 29.730 185 115 6 1 173 312 493 1.91e-16 77.8
Msa0161200 MtrunA17_Chr6g0449331 30.337 178 114 5 1 173 328 500 1.93e-16 77.8
Msa0161200 MtrunA17_Chr1g0163421 33.129 163 102 5 1 157 352 513 2.75e-16 77.4
Msa0161200 MtrunA17_Chr6g0479681 29.703 202 116 7 1 182 332 527 3.79e-16 77.0
Msa0161200 MtrunA17_Chr8g0351391 28.108 185 118 6 1 173 317 498 1.15e-15 75.9
Msa0161200 MtrunA17_Chr1g0154731 28.931 159 106 2 1 158 325 477 1.17e-15 75.5
Msa0161200 MtrunA17_Chr1g0182861 31.343 134 85 3 46 174 26 157 1.62e-15 71.6
Msa0161200 MtrunA17_Chr8g0351311 28.191 188 114 6 1 173 318 499 3.60e-15 74.3
Msa0161200 MtrunA17_Chr2g0293411 30.000 140 88 2 3 138 309 442 4.45e-15 73.9
Msa0161200 MtrunA17_Chr8g0381571 27.857 140 91 2 3 138 311 444 5.22e-15 73.6
Msa0161200 MtrunA17_Chr8g0381541 27.857 140 91 2 3 138 311 444 7.35e-15 73.2
Msa0161200 MtrunA17_Chr1g0179811 26.506 166 120 2 1 165 356 520 8.46e-15 73.2
Msa0161200 MtrunA17_Chr1g0163461 33.129 163 102 5 1 157 331 492 1.05e-14 72.8
Msa0161200 MtrunA17_Chr1g0163371 31.288 163 105 4 1 157 34 195 1.24e-14 70.5
Msa0161200 MtrunA17_Chr6g0472221 31.056 161 103 4 1 158 345 500 1.25e-14 72.8
Msa0161200 MtrunA17_Chr7g0215181 30.435 161 104 4 1 160 332 485 1.54e-14 72.4
Msa0161200 MtrunA17_Chr1g0183611 30.675 163 106 5 1 157 237 398 1.57e-14 72.0
Msa0161200 MtrunA17_Chr3g0104351 30.688 189 112 7 1 173 318 503 1.81e-14 72.0
Msa0161200 MtrunA17_Chr4g0038271 29.245 212 129 7 1 198 366 570 2.16e-14 72.0
Msa0161200 MtrunA17_Chr3g0128461 29.299 157 107 4 3 158 345 498 2.68e-14 71.6
Msa0161200 MtrunA17_Chr1g0164371 29.091 165 106 3 1 161 297 454 3.21e-14 71.2
Msa0161200 MtrunA17_Chr8g0351421 28.877 187 115 6 1 173 315 497 4.05e-14 71.2
Msa0161200 MtrunA17_Chr7g0248991 30.328 122 84 1 1 122 247 367 4.17e-14 70.9
Msa0161200 MtrunA17_Chr4g0004481 29.012 162 108 4 14 173 321 477 4.38e-14 70.9
Msa0161200 MtrunA17_Chr4g0056981 41.667 72 41 1 15 85 1 72 6.77e-14 64.7
Msa0161200 MtrunA17_Chr6g0449381 30.263 152 102 4 14 163 334 483 8.72e-14 70.1
Msa0161200 MtrunA17_Chr6g0449341 28.994 169 114 4 1 164 376 543 9.41e-14 70.1
Msa0161200 MtrunA17_Chr5g0400411 29.577 142 86 4 3 138 311 444 1.01e-13 70.1
Msa0161200 MtrunA17_Chr3g0078411 27.673 159 107 3 4 159 288 441 1.20e-13 69.7
Msa0161200 MtrunA17_Chr8g0348751 30.317 221 125 9 1 204 315 523 1.21e-13 69.7
Msa0161200 MtrunA17_Chr7g0262111 30.986 142 91 3 18 158 344 479 1.33e-13 69.7
Msa0161200 MtrunA17_Chr5g0400421 28.873 142 87 4 3 138 312 445 1.74e-13 69.3
Msa0161200 MtrunA17_Chr5g0404861 28.378 148 99 2 35 182 17 157 2.06e-13 65.9
Msa0161200 MtrunA17_Chr2g0293421 26.316 152 101 2 3 150 311 455 2.16e-13 68.9
Msa0161200 MtrunA17_Chr1g0164321 30.508 177 115 5 19 190 378 551 2.20e-13 68.9
Msa0161200 MtrunA17_Chr8g0341951 28.188 149 96 3 35 182 332 470 2.51e-13 68.9
Msa0161200 MtrunA17_Chr6g0455461 27.950 161 107 4 4 160 288 443 2.58e-13 68.6
Msa0161200 MtrunA17_Chr4g0063221 28.302 159 111 3 1 158 337 493 3.11e-13 68.6
Msa0161200 MtrunA17_Chr7g0219961 26.708 161 109 4 4 160 287 442 4.36e-13 68.2
Msa0161200 MtrunA17_Chr8g0380931 28.947 152 98 3 11 157 333 479 4.48e-13 68.2
Msa0161200 MtrunA17_Chr8g0372411 28.082 146 98 2 35 180 336 474 7.99e-12 64.3
Msa0161200 MtrunA17_Chr3g0141801 25.926 189 124 5 1 183 305 483 1.30e-11 63.5
Msa0161200 MtrunA17_Chr3g0089361 29.710 138 88 3 3 138 302 432 1.82e-11 63.2
Msa0161200 MtrunA17_Chr4g0067191 29.319 191 95 6 1 158 304 487 2.06e-11 63.2
Msa0161200 MtrunA17_Chr4g0000151 34.343 99 58 2 40 138 6 97 3.49e-11 59.7
Msa0161200 MtrunA17_Chr1g0184421 28.481 158 105 5 1 153 317 471 3.80e-11 62.4
Msa0161200 MtrunA17_Chr1g0163401 30.201 149 88 5 23 164 353 492 4.47e-11 62.0
Msa0161200 MtrunA17_Chr8g0354571 31.013 158 103 5 3 158 345 498 6.19e-11 61.6
Msa0161200 MtrunA17_Chr8g0380471 28.659 164 103 3 8 168 304 456 7.67e-11 61.2
Msa0161200 MtrunA17_Chr2g0313811 28.025 157 109 4 3 158 349 502 9.47e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0161200 AT2G27010.1 48.087 183 90 3 1 179 296 477 1.46e-58 193
Msa0161200 AT3G20120.2 47.802 182 91 2 1 179 183 363 2.45e-58 189
Msa0161200 AT3G20120.3 47.802 182 91 2 1 179 183 363 2.45e-58 189
Msa0161200 AT3G20120.1 47.802 182 91 2 1 179 183 363 2.45e-58 189
Msa0161200 AT5G06900.1 50.000 180 84 3 1 180 313 486 4.50e-58 192
Msa0161200 AT3G20130.2 46.995 183 92 3 1 179 292 473 2.66e-57 189
Msa0161200 AT3G20120.4 47.802 182 91 2 1 179 319 499 4.71e-57 189
Msa0161200 AT3G20130.1 46.995 183 92 3 1 179 320 501 4.85e-57 189
Msa0161200 AT3G20950.1 47.826 184 91 3 1 180 324 506 1.14e-56 189
Msa0161200 AT1G66540.2 46.961 181 88 2 1 180 137 310 8.17e-56 181
Msa0161200 AT1G66540.1 46.961 181 88 2 1 180 196 369 2.79e-55 181
Msa0161200 AT4G15330.2 46.961 181 93 3 1 179 288 467 3.23e-55 184
Msa0161200 AT3G20100.1 47.514 181 92 1 2 179 321 501 4.06e-55 184
Msa0161200 AT4G15330.1 46.961 181 93 3 1 179 316 495 6.18e-55 184
Msa0161200 AT3G20960.1 46.961 181 92 3 2 179 218 397 7.69e-55 181
Msa0161200 AT2G27000.1 46.995 183 92 3 1 179 318 499 8.46e-55 183
Msa0161200 AT4G37360.1 47.222 180 87 2 1 179 309 481 1.05e-54 183
Msa0161200 AT4G15350.1 46.995 183 92 3 1 179 314 495 1.05e-54 183
Msa0161200 AT3G20090.1 46.961 181 92 3 2 179 185 364 1.21e-54 180
Msa0161200 AT4G15360.1 46.369 179 94 2 2 179 321 498 5.20e-54 182
Msa0161200 AT3G20140.1 49.721 179 87 3 2 179 321 497 6.06e-54 181
Msa0161200 AT3G20960.2 46.961 181 92 3 2 179 321 500 6.20e-54 181
Msa0161200 AT5G47990.1 46.703 182 92 3 1 179 321 500 8.84e-54 181
Msa0161200 AT2G14100.1 46.961 181 93 3 1 179 321 500 9.14e-54 181
Msa0161200 AT3G20090.2 46.961 181 92 3 2 179 323 502 2.79e-53 179
Msa0161200 AT5G42580.1 45.055 182 97 1 1 179 305 486 5.02e-53 178
Msa0161200 AT3G32047.1 46.629 178 92 3 1 176 319 495 1.31e-52 177
Msa0161200 AT4G37310.1 45.213 188 96 4 1 184 314 498 3.77e-52 176
Msa0161200 AT1G50560.1 47.802 182 91 3 1 179 324 504 4.83e-52 176
Msa0161200 AT3G20935.1 43.407 182 98 3 2 179 147 327 7.66e-52 172
Msa0161200 AT4G15380.1 44.262 183 97 3 1 179 316 497 1.61e-51 175
Msa0161200 AT1G28430.1 46.703 182 91 3 3 179 320 500 1.65e-51 175
Msa0161200 AT4G31940.1 45.856 181 96 2 1 179 330 510 2.43e-51 174
Msa0161200 AT4G12300.1 45.304 181 97 2 1 180 323 502 2.46e-51 174
Msa0161200 AT2G45570.1 45.355 183 94 3 1 179 321 501 3.71e-51 174
Msa0161200 AT2G42250.1 40.860 186 104 1 1 180 319 504 4.01e-51 174
Msa0161200 AT3G20110.1 45.251 179 93 2 1 179 317 490 9.11e-51 172
Msa0161200 AT4G37320.1 45.556 180 90 2 1 179 309 481 1.57e-50 172
Msa0161200 AT1G50520.1 43.956 182 98 2 1 179 323 503 1.73e-50 172
Msa0161200 AT5G07990.1 44.211 190 100 3 1 184 311 500 1.88e-50 172
Msa0161200 AT4G31970.1 44.751 181 98 2 1 179 329 509 2.52e-50 172
Msa0161200 AT4G37370.1 45.556 180 89 4 1 179 308 479 4.95e-50 171
Msa0161200 AT4G12330.1 41.436 181 103 2 1 180 326 504 4.98e-50 171
Msa0161200 AT4G31950.1 44.751 181 98 2 1 179 318 498 5.43e-50 171
Msa0161200 AT4G37330.1 45.000 180 91 2 1 179 306 478 9.95e-50 169
Msa0161200 AT4G22710.1 43.889 180 98 2 2 180 334 511 1.01e-49 170
Msa0161200 AT3G20940.1 43.956 182 97 3 2 179 322 502 1.01e-49 170
Msa0161200 AT4G22690.1 43.889 180 98 2 2 180 365 542 1.28e-49 171
Msa0161200 AT5G67310.1 42.162 185 99 2 1 184 320 497 1.95e-49 169
Msa0161200 AT3G20080.4 44.809 183 94 4 2 179 185 365 2.48e-49 166
Msa0161200 AT3G20080.5 44.809 183 94 4 2 179 185 365 2.48e-49 166
Msa0161200 AT3G20080.6 44.809 183 94 4 2 179 185 365 2.48e-49 166
Msa0161200 AT3G20080.3 44.809 183 94 4 2 179 185 365 2.48e-49 166
Msa0161200 AT2G45580.2 42.308 182 100 2 1 179 168 347 3.39e-49 165
Msa0161200 AT4G12310.1 43.094 181 101 2 1 180 327 506 3.49e-49 169
Msa0161200 AT2G45550.1 45.405 185 91 4 1 179 320 500 3.94e-49 168
Msa0161200 AT5G36220.2 46.111 180 89 3 1 179 169 341 5.96e-49 164
Msa0161200 AT5G44620.1 41.989 181 102 2 1 180 327 505 5.97e-49 168
Msa0161200 AT4G12320.1 43.094 181 101 2 1 180 325 504 1.08e-48 167
Msa0161200 AT3G28740.1 44.318 176 90 2 1 175 317 485 2.99e-48 166
Msa0161200 AT1G74550.1 43.646 181 98 3 1 179 295 473 3.66e-48 165
Msa0161200 AT3G20080.2 44.809 183 94 4 2 179 322 502 4.92e-48 166
Msa0161200 AT3G20080.1 44.809 183 94 4 2 179 322 502 4.92e-48 166
Msa0161200 AT2G45580.1 42.308 182 100 2 1 179 322 501 5.98e-48 165
Msa0161200 AT1G33730.1 40.761 184 103 3 1 180 184 365 7.73e-48 162
Msa0161200 AT1G33730.2 40.761 184 103 3 1 180 184 365 7.73e-48 162
Msa0161200 AT1G33720.4 41.304 184 102 3 1 180 188 369 1.10e-47 162
Msa0161200 AT1G33720.3 41.304 184 102 3 1 180 188 369 1.10e-47 162
Msa0161200 AT1G33720.5 41.304 184 102 3 1 180 188 369 1.10e-47 162
Msa0161200 AT1G33720.2 41.304 184 102 3 1 180 213 394 1.79e-47 162
Msa0161200 AT5G36220.1 46.111 180 89 3 1 179 315 487 1.88e-47 164
Msa0161200 AT1G74540.1 42.541 181 100 3 1 179 301 479 1.01e-46 162
Msa0161200 AT3G52970.1 41.622 185 102 4 1 179 322 506 2.53e-46 161
Msa0161200 AT4G37340.1 42.473 186 98 3 1 184 309 487 2.61e-46 160
Msa0161200 AT1G33720.1 41.304 184 102 3 1 180 320 501 2.80e-46 161
Msa0161200 AT3G52970.2 41.622 185 102 4 1 179 336 520 2.97e-46 161
Msa0161200 AT2G45560.1 41.622 185 98 4 1 179 320 500 7.71e-46 160
Msa0161200 AT4G37410.1 40.884 181 101 3 1 179 306 482 1.64e-45 159
Msa0161200 AT3G25180.1 42.778 180 100 2 1 179 322 499 3.42e-45 158
Msa0161200 AT3G26270.1 42.857 182 99 4 1 179 314 493 1.40e-44 156
Msa0161200 AT3G26230.1 41.848 184 99 5 1 179 310 490 2.32e-44 155
Msa0161200 AT4G36220.1 40.437 183 103 3 1 179 328 508 4.77e-44 155
Msa0161200 AT2G23220.1 42.614 176 93 2 1 175 324 492 8.79e-44 154
Msa0161200 AT2G23190.1 41.989 181 97 2 1 180 353 526 1.03e-43 154
Msa0161200 AT2G40890.1 39.773 176 98 4 2 172 309 481 2.19e-43 153
Msa0161200 AT4G37400.1 40.556 180 105 2 1 179 304 482 2.51e-43 153
Msa0161200 AT3G26180.2 42.391 184 99 4 1 179 179 360 3.19e-43 150
Msa0161200 AT4G37430.1 41.111 180 102 3 1 179 309 485 8.07e-43 151
Msa0161200 AT3G61040.1 40.761 184 102 3 1 179 308 489 8.25e-43 151
Msa0161200 AT1G13080.2 41.622 185 99 5 1 179 195 376 2.11e-42 148
Msa0161200 AT3G26180.1 42.391 184 99 4 1 179 313 494 2.34e-42 150
Msa0161200 AT3G26150.1 42.391 184 99 4 1 179 313 494 2.36e-42 150
Msa0161200 AT5G25120.1 40.437 183 103 3 1 179 306 486 3.68e-42 149
Msa0161200 AT5G06905.1 39.572 187 95 3 1 174 310 491 4.37e-42 150
Msa0161200 AT3G26300.1 41.622 185 102 3 1 181 310 492 4.84e-42 149
Msa0161200 AT5G10600.1 40.331 181 103 2 1 180 324 500 6.30e-42 149
Msa0161200 AT3G26170.1 41.848 184 100 4 1 179 313 494 9.85e-42 149
Msa0161200 AT5G25180.1 40.884 181 101 3 3 179 308 486 1.02e-41 148
Msa0161200 AT3G26280.1 40.659 182 100 5 3 179 316 494 1.34e-41 148
Msa0161200 AT3G26280.2 40.659 182 100 5 3 179 333 511 1.53e-41 148
Msa0161200 AT3G26210.1 40.659 182 101 4 3 179 314 493 1.73e-41 148
Msa0161200 AT1G13080.1 41.622 185 99 5 1 179 313 494 2.42e-41 147
Msa0161200 AT5G10610.1 40.884 181 102 3 1 180 308 484 4.90e-41 147
Msa0161200 AT5G25140.1 40.217 184 102 4 1 179 306 486 6.26e-41 146
Msa0161200 AT3G26830.1 43.038 158 86 3 3 158 311 466 1.60e-40 145
Msa0161200 AT5G57220.1 42.614 176 89 5 1 173 304 470 1.64e-40 145
Msa0161200 AT5G04330.1 38.587 184 108 3 1 180 316 498 1.81e-40 145
Msa0161200 AT3G61880.2 37.327 217 128 5 1 212 339 552 4.12e-40 145
Msa0161200 AT3G26310.1 39.459 185 106 3 1 181 309 491 4.99e-40 144
Msa0161200 AT4G31500.1 43.312 157 87 2 3 157 310 466 5.08e-40 144
Msa0161200 AT5G25130.1 38.798 183 106 3 1 179 306 486 5.47e-40 144
Msa0161200 AT3G26160.1 41.341 179 96 5 1 173 313 488 2.23e-39 142
Msa0161200 AT3G26330.1 38.919 185 107 3 1 181 310 492 2.31e-39 142
Msa0161200 AT3G61880.1 37.566 189 113 3 1 184 339 527 2.65e-39 142
Msa0161200 AT2G46660.1 39.344 183 107 2 1 179 339 521 4.18e-39 142
Msa0161200 AT5G57260.1 38.830 188 106 4 1 181 310 495 1.08e-38 140
Msa0161200 AT1G13110.1 36.957 184 109 4 1 179 315 496 1.42e-38 140
Msa0161200 AT1G01190.1 38.919 185 108 3 1 180 341 525 5.88e-38 139
Msa0161200 AT1G01190.2 38.919 185 108 3 1 180 346 530 6.32e-38 139
Msa0161200 AT2G25160.1 38.043 184 103 2 3 179 326 505 9.45e-38 138
Msa0161200 AT2G22330.1 35.602 191 120 2 1 188 347 537 1.82e-37 137
Msa0161200 AT2G30490.1 41.558 154 89 1 1 153 315 468 1.85e-37 137
Msa0161200 AT1G01280.1 37.912 182 107 3 2 179 317 496 1.94e-37 137
Msa0161200 AT2G22330.2 38.037 163 100 1 1 162 370 532 2.18e-37 137
Msa0161200 AT2G02580.1 40.860 186 102 4 1 181 310 492 4.33e-37 136
Msa0161200 AT1G64930.1 37.912 182 110 3 1 179 320 501 9.06e-37 135
Msa0161200 AT3G26220.1 41.530 183 101 4 1 179 313 493 1.72e-36 134
Msa0161200 AT1G74110.1 38.919 185 106 4 1 180 348 530 2.18e-36 134
Msa0161200 AT4G39950.1 35.979 189 116 2 1 188 345 529 2.45e-36 134
Msa0161200 AT1G13090.2 40.000 155 89 3 3 155 311 463 2.88e-36 134
Msa0161200 AT4G39950.2 35.979 189 116 2 1 188 385 569 3.20e-36 134
Msa0161200 AT2G24180.1 37.222 180 108 3 1 179 316 491 3.94e-36 133
Msa0161200 AT5G35715.1 36.957 184 109 4 1 179 248 429 5.86e-36 132
Msa0161200 AT1G13100.1 39.355 155 90 3 3 155 311 463 9.83e-36 132
Msa0161200 AT3G26320.1 36.216 185 112 3 1 181 310 492 1.27e-35 132
Msa0161200 AT1G13710.1 40.110 182 103 4 1 179 327 505 2.52e-35 131
Msa0161200 AT1G79370.1 41.772 158 90 2 1 157 346 502 3.07e-35 131
Msa0161200 AT1G64940.1 37.363 182 109 4 1 179 322 501 4.83e-35 130
Msa0161200 AT2G30770.1 37.433 187 107 6 1 180 307 490 1.21e-34 129
Msa0161200 AT3G26290.1 40.000 185 105 3 1 181 310 492 1.39e-34 129
Msa0161200 AT3G26290.2 40.000 185 105 3 1 181 323 505 1.52e-34 129
Msa0161200 AT4G13310.1 35.135 185 113 4 1 180 309 491 1.01e-33 127
Msa0161200 AT5G09970.1 36.612 183 110 3 2 179 347 528 1.29e-33 127
Msa0161200 AT4G13290.1 34.054 185 115 4 1 180 302 484 1.92e-33 126
Msa0161200 AT5G05260.1 35.938 192 111 4 2 181 304 495 2.49e-33 125
Msa0161200 AT5G05260.2 35.938 192 111 4 2 181 336 527 3.26e-33 125
Msa0161200 AT3G48310.1 32.609 184 117 4 1 179 301 482 5.07e-33 125
Msa0161200 AT1G11610.1 39.572 187 103 6 1 180 307 490 9.56e-33 124
Msa0161200 AT3G48300.1 34.254 181 114 4 1 179 298 475 1.14e-32 124
Msa0161200 AT3G48300.2 34.254 181 114 4 1 179 300 477 1.16e-32 124
Msa0161200 AT2G05180.1 48.113 106 55 0 2 107 321 426 2.54e-32 122
Msa0161200 AT3G48280.1 32.609 184 117 4 1 179 300 481 3.50e-32 122
Msa0161200 AT4G13770.1 34.783 184 111 5 3 179 311 492 4.59e-32 122
Msa0161200 AT3G26190.1 38.587 184 106 4 1 179 310 491 4.70e-32 122
Msa0161200 AT2G12190.1 36.813 182 112 3 1 179 321 502 6.00e-32 122
Msa0161200 AT1G64950.1 37.363 182 109 4 1 179 321 500 8.38e-32 122
Msa0161200 AT1G11610.2 39.011 182 101 6 1 175 307 485 1.63e-31 121
Msa0161200 AT5G24950.1 35.294 187 111 6 1 180 307 490 1.69e-31 120
Msa0161200 AT1G16410.1 36.957 184 110 4 1 179 338 520 1.83e-31 121
Msa0161200 AT3G48270.1 32.065 184 118 4 1 179 300 481 1.95e-31 120
Msa0161200 AT3G26200.1 37.838 185 106 5 1 179 310 491 2.04e-31 120
Msa0161200 AT2G30750.1 37.968 187 106 6 1 180 307 490 4.14e-31 120
Msa0161200 AT1G58260.1 37.423 163 95 3 1 157 329 490 8.70e-31 119
Msa0161200 AT1G16400.1 35.294 187 115 4 1 182 337 522 1.38e-30 119
Msa0161200 AT3G48290.2 32.065 184 118 4 1 179 328 509 1.74e-30 118
Msa0161200 AT3G48290.1 32.065 184 118 4 1 179 302 483 1.86e-30 118
Msa0161200 AT1G64900.1 36.264 182 113 3 1 179 315 496 2.17e-30 118
Msa0161200 AT5G04630.1 38.217 157 95 2 1 155 320 476 2.36e-30 117
Msa0161200 AT5G04660.1 35.714 182 114 3 1 179 323 504 3.70e-30 117
Msa0161200 AT3G53300.1 35.870 184 111 4 1 179 310 491 6.78e-30 116
Msa0161200 AT3G10570.1 38.854 157 93 3 1 155 325 480 2.18e-29 115
Msa0161200 AT3G44250.1 36.022 186 112 4 1 181 309 492 3.62e-29 114
Msa0161200 AT3G03470.1 36.932 176 103 3 1 168 315 490 9.49e-28 110
Msa0161200 AT5G42590.1 33.333 186 116 4 1 180 308 491 1.13e-27 110
Msa0161200 AT3G48320.1 32.609 184 117 4 1 179 301 482 2.82e-27 109
Msa0161200 AT3G53280.1 35.556 180 109 4 1 175 308 485 3.68e-27 108
Msa0161200 AT3G10560.1 38.217 157 94 3 1 155 325 480 5.87e-27 108
Msa0161200 AT5G24960.1 37.433 187 107 6 1 180 308 491 4.68e-26 105
Msa0161200 AT1G11600.1 32.979 188 122 2 1 184 320 507 6.66e-26 105
Msa0161200 AT5G61320.1 37.589 141 86 2 41 179 340 480 2.05e-25 103
Msa0161200 AT3G53290.1 38.125 160 93 3 24 179 241 398 4.07e-25 102
Msa0161200 AT5G25900.1 30.939 181 118 5 2 180 326 501 1.36e-22 96.3
Msa0161200 AT4G20240.1 35.345 116 72 2 1 115 308 421 7.77e-20 88.2
Msa0161200 AT3G53305.1 35.714 154 80 5 35 176 183 329 9.37e-20 87.0
Msa0161200 AT1G31800.1 28.481 158 112 1 1 158 386 542 1.38e-19 87.8
Msa0161200 AT1G47620.1 31.522 184 117 6 1 179 329 508 2.31e-18 84.0
Msa0161200 AT4G39510.1 32.044 181 112 7 3 179 325 498 3.55e-18 83.6
Msa0161200 AT4G15110.1 28.421 190 100 4 1 159 368 552 7.67e-18 82.4
Msa0161200 AT2G26170.2 32.143 140 93 2 20 158 272 410 1.48e-17 81.3
Msa0161200 AT1G57750.1 30.939 181 114 5 1 179 318 489 1.53e-17 81.6
Msa0161200 AT2G26170.1 32.143 140 93 2 20 158 355 493 1.68e-17 81.6
Msa0161200 AT5G35920.1 36.036 111 70 1 46 155 6 116 1.98e-17 77.0
Msa0161200 AT2G23180.1 31.351 185 118 5 1 179 324 505 2.50e-17 80.9
Msa0161200 AT4G39490.1 29.381 194 119 5 1 179 319 509 3.34e-17 80.5
Msa0161200 AT3G53130.1 27.711 166 118 2 1 165 356 520 5.28e-17 80.1
Msa0161200 AT5G52400.1 32.075 159 104 3 1 158 338 493 3.75e-16 77.4
Msa0161200 AT4G39480.1 31.138 167 100 4 1 153 317 482 3.84e-16 77.4
Msa0161200 AT2G45580.3 44.444 81 45 0 1 81 322 402 4.78e-16 77.0
Msa0161200 AT5G35917.1 30.208 192 79 9 2 181 340 488 1.60e-15 75.5
Msa0161200 AT5G24900.2 30.189 159 107 4 1 158 229 384 2.09e-15 75.1
Msa0161200 AT2G26710.1 30.189 159 108 3 1 158 333 489 2.31e-15 75.1
Msa0161200 AT5G24900.1 30.189 159 107 4 1 158 346 501 2.62e-15 75.1
Msa0161200 AT3G44970.1 26.816 179 115 4 4 177 297 464 3.12e-15 74.7
Msa0161200 AT4G32170.1 31.646 158 101 5 3 157 323 476 4.16e-15 74.3
Msa0161200 AT2G45510.1 29.714 175 107 6 1 162 314 485 2.20e-14 72.4
Msa0161200 AT1G65340.1 29.560 159 106 4 1 157 322 476 3.31e-14 71.6
Msa0161200 AT2G44890.1 30.811 185 113 7 1 173 314 495 3.59e-14 71.6
Msa0161200 AT3G61040.2 41.176 85 48 1 1 83 308 392 5.79e-14 70.9
Msa0161200 AT2G45970.1 30.481 187 113 6 1 173 314 497 1.51e-13 69.7
Msa0161200 AT1G75130.1 29.560 159 105 2 1 158 325 477 1.75e-13 69.7
Msa0161200 AT1G16410.2 42.857 77 43 1 1 76 338 414 1.76e-13 69.7
Msa0161200 AT2G29090.2 26.829 164 109 2 1 160 303 459 5.15e-13 68.2
Msa0161200 AT2G29090.1 26.829 164 109 2 1 160 303 459 5.15e-13 68.2
Msa0161200 AT5G58860.1 26.882 186 121 5 1 173 312 495 6.71e-13 67.8
Msa0161200 AT4G20240.2 37.349 83 52 0 1 83 308 390 7.31e-13 67.8
Msa0161200 AT2G29090.3 26.829 164 109 2 1 160 208 364 7.49e-13 67.4
Msa0161200 AT1G19630.1 27.500 160 106 2 1 157 296 448 7.52e-13 67.8
Msa0161200 AT3G14620.1 29.747 158 107 4 3 158 334 489 9.16e-13 67.4
Msa0161200 AT4G19230.1 25.926 162 110 2 1 159 284 438 1.01e-12 67.4
Msa0161200 AT2G25160.2 43.836 73 37 1 3 75 326 394 1.80e-12 66.6
Msa0161200 AT3G19270.2 27.607 163 107 3 1 159 287 442 1.94e-12 66.6
Msa0161200 AT3G30290.1 34.351 131 79 4 11 138 231 357 2.42e-12 66.2
Msa0161200 AT4G20235.1 32.323 99 62 3 61 157 235 330 3.81e-12 65.5
Msa0161200 AT3G26125.1 28.947 152 102 4 16 163 362 511 5.45e-12 65.5
Msa0161200 AT5G05690.3 25.949 158 111 2 1 155 168 322 6.75e-12 64.7
Msa0161200 AT4G13310.2 40.000 80 47 1 1 79 309 388 7.15e-12 64.7
Msa0161200 AT5G23190.1 30.405 148 95 5 36 180 392 534 1.00e-11 64.7
Msa0161200 AT4G19230.2 28.369 141 91 2 1 138 284 417 1.07e-11 64.3
Msa0161200 AT5G05690.1 25.949 158 111 2 1 155 287 441 1.10e-11 64.3
Msa0161200 AT3G30180.1 24.581 179 125 3 4 179 289 460 1.44e-11 63.9
Msa0161200 AT5G38450.1 28.947 152 102 3 10 160 346 492 1.44e-11 63.9
Msa0161200 AT1G19630.3 28.369 141 91 2 1 138 296 429 2.91e-11 63.2
Msa0161200 AT5G24910.1 26.415 159 113 4 1 158 351 506 3.00e-11 63.2
Msa0161200 AT5G38970.2 27.329 161 108 4 4 160 208 363 3.43e-11 62.8
Msa0161200 AT5G38970.4 27.329 161 108 4 4 160 208 363 3.43e-11 62.8
Msa0161200 AT4G27710.1 29.167 144 99 2 16 158 350 491 3.44e-11 62.8
Msa0161200 AT5G38970.1 27.329 161 108 4 4 160 289 444 3.53e-11 62.8

Find 61 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAACAACCCACATTTAA+TGG 0.191628 1_4:-35811836 Msa0161200:CDS
CTGAGAGTTATGTGTTTATA+TGG 0.204261 1_4:-35811141 Msa0161200:CDS
CAATGATACAATGTTTCTAT+TGG 0.280031 1_4:-35811417 Msa0161200:CDS
TTTAGTATTGCATGCAAGTA+TGG 0.293323 1_4:+35811739 None:intergenic
GCATGCAAGTATGGAAGTTT+TGG 0.309720 1_4:+35811748 None:intergenic
TCCGAAAGTTGCGTCGTATA+TGG 0.329687 1_4:-35811667 Msa0161200:CDS
ACCATATACGACGCAACTTT+CGG 0.334259 1_4:+35811666 None:intergenic
ATCATTGCAGCAAGATTTGT+TGG 0.358958 1_4:+35811433 None:intergenic
CTATCAGCGTGGTACCTTGC+TGG 0.366106 1_4:-35810818 Msa0161200:CDS
CAATTATATTTGTTGATTTG+TGG 0.368338 1_4:-35811624 Msa0161200:CDS
AATTTGCAATATATGCCATT+TGG 0.389763 1_4:-35811505 Msa0161200:CDS
ATTTGTTGATTTGTGGTCAA+TGG 0.392318 1_4:-35811617 Msa0161200:CDS
ATATAAACTTGTTGGTGATC+AGG 0.394907 1_4:-35811221 Msa0161200:CDS
TAAACTTATTACAAGGTATA+CGG 0.395914 1_4:+35810846 None:intergenic
CATAACAATGGAGTGGGCTT+TGG 0.395983 1_4:-35811866 None:intergenic
AGCTTTCAATATAAACTTGT+TGG 0.401104 1_4:-35811229 Msa0161200:CDS
CAATATATGCCATTTGGAAC+TGG 0.403393 1_4:-35811499 Msa0161200:CDS
TGGGTAGGGATCCCAAACTA+TGG 0.422413 1_4:-35811597 Msa0161200:CDS
GATGCTTCTTTAACTATAAG+TGG 0.424559 1_4:+35811688 None:intergenic
TGTTTCTATTGGAAGGTTAG+TGG 0.429607 1_4:-35811406 Msa0161200:CDS
TATTGGAAGGTTAGTGGTGA+TGG 0.429752 1_4:-35811400 Msa0161200:CDS
CTTGCTTTCTCCATTAAATG+TGG 0.433160 1_4:+35811826 None:intergenic
TCATTTACAAAAGAAATAAG+AGG 0.434715 1_4:-35811177 Msa0161200:CDS
AACCAGCTTTAACACTTCCT+AGG 0.450450 1_4:-35811357 Msa0161200:CDS
TGAGAGTTATGTGTTTATAT+GGG 0.456487 1_4:-35811140 Msa0161200:intron
CCTTCACTCATAAACCTCTC+TGG 0.471007 1_4:+35811553 None:intergenic
ACAAATATAATTGTCTTCGC+TGG 0.473648 1_4:+35811634 None:intergenic
TTGATTTGTGGTCAATGGGT+AGG 0.479887 1_4:-35811612 Msa0161200:CDS
TTAACTATAAGTGGTACTGT+AGG 0.481791 1_4:+35811697 None:intergenic
TGCCATTTGGAACTGGAAGA+AGG 0.489125 1_4:-35811492 Msa0161200:CDS
GAAAATAGTAGATTAATTCA+AGG 0.489428 1_4:-35811781 Msa0161200:CDS
GATACAATGTTTCTATTGGA+AGG 0.493152 1_4:-35811413 Msa0161200:CDS
TTTGTTGATTTGTGGTCAAT+GGG 0.505091 1_4:-35811616 Msa0161200:CDS
TGATTTGTGGTCAATGGGTA+GGG 0.508029 1_4:-35811611 Msa0161200:CDS
GCCCTTCTTCCAGTTCCAAA+TGG 0.516275 1_4:+35811490 None:intergenic
TTTAATGGAGAAAGCAAGAC+AGG 0.524163 1_4:-35811821 Msa0161200:CDS
GATCAGGAGTTTGAATTGAA+AGG 0.525329 1_4:-35811205 Msa0161200:CDS
TTGCTTTCTCCATTAAATGT+GGG 0.531204 1_4:+35811827 None:intergenic
CATATAAACACATAACTCTC+AGG 0.531242 1_4:+35811142 None:intergenic
CCAGAGAGGTTTATGAGTGA+AGG 0.533149 1_4:-35811553 Msa0161200:CDS
ACTGGAAGAAGGGCTTGCCC+TGG 0.533975 1_4:-35811481 Msa0161200:CDS
CAGAGAGGTTTATGAGTGAA+GGG 0.547165 1_4:-35811552 Msa0161200:CDS
TCTCTGGCTTGAACTCGAGC+GGG 0.549423 1_4:+35811569 None:intergenic
GCCATTTGGAACTGGAAGAA+GGG 0.552147 1_4:-35811491 Msa0161200:CDS
GCCCTAGGAAGTGTTAAAGC+TGG 0.554364 1_4:+35811355 None:intergenic
TGAAGTGCTAATGAAGCACC+AGG 0.555751 1_4:+35811463 None:intergenic
CTCTCTGGCTTGAACTCGAG+CGG 0.562271 1_4:+35811568 None:intergenic
GGGTAGGGATCCCAAACTAT+GGG 0.565172 1_4:-35811596 Msa0161200:CDS
ATCTGCCATAACAATGGAGT+GGG 0.567280 1_4:-35811872 None:intergenic
ACCAGCTTTAACACTTCCTA+GGG 0.569642 1_4:-35811356 Msa0161200:CDS
TAACTATAAGTGGTACTGTA+GGG 0.574888 1_4:+35811698 None:intergenic
AAAGAAATAAGAGGATGAAG+TGG 0.599150 1_4:-35811168 Msa0161200:CDS
CACATCAAAGGATGAGCCCT+AGG 0.605385 1_4:+35811340 None:intergenic
CGCTCGAGTTCAAGCCAGAG+AGG 0.608119 1_4:-35811567 Msa0161200:CDS
TGGTGATGGAACAGTTAACA+TGG 0.624580 1_4:-35811386 Msa0161200:CDS
GGAATAGGGACACACATCAA+AGG 0.625271 1_4:+35811328 None:intergenic
AGTGACATAAACTTATTACA+AGG 0.629048 1_4:+35810839 None:intergenic
AAGTGTTTGTGACGCCAGCA+AGG 0.650638 1_4:+35810804 None:intergenic
CATCTGCCATAACAATGGAG+TGG 0.660472 1_4:-35811873 None:intergenic
AGTTTATGTCACTATCAGCG+TGG 0.739285 1_4:-35810829 Msa0161200:CDS
GAAGTGCTAATGAAGCACCA+GGG 0.787113 1_4:+35811464 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATAGTAGATTAATTCA+AGG - chr1_4:35810880-35810899 Msa0161200:intron 20.0%
!!! CAATTATATTTGTTGATTTG+TGG - chr1_4:35811037-35811056 Msa0161200:intron 20.0%
!! TCATTTACAAAAGAAATAAG+AGG - chr1_4:35811484-35811503 Msa0161200:CDS 20.0%
!! TAAACTTATTACAAGGTATA+CGG + chr1_4:35811818-35811837 None:intergenic 20.0%
!! GAAAATAGTAGATTAATTCA+AGG - chr1_4:35810880-35810899 Msa0161200:intron 20.0%
!!! CAATTATATTTGTTGATTTG+TGG - chr1_4:35811037-35811056 Msa0161200:intron 20.0%
!! TCATTTACAAAAGAAATAAG+AGG - chr1_4:35811484-35811503 Msa0161200:CDS 20.0%
!! TAAACTTATTACAAGGTATA+CGG + chr1_4:35811818-35811837 None:intergenic 20.0%
!!! AGGGAATAAGTTTGATTTTA+AGG - chr1_4:35811128-35811147 Msa0161200:intron 25.0%
!!! GGGAATAAGTTTGATTTTAA+GGG - chr1_4:35811129-35811148 Msa0161200:intron 25.0%
! AATTTGCAATATATGCCATT+TGG - chr1_4:35811156-35811175 Msa0161200:CDS 25.0%
!! CAATGATACAATGTTTCTAT+TGG - chr1_4:35811244-35811263 Msa0161200:intron 25.0%
! TACTATTAAATCGAGGAATA+GGG + chr1_4:35811350-35811369 None:intergenic 25.0%
! ATACTATTAAATCGAGGAAT+AGG + chr1_4:35811351-35811370 None:intergenic 25.0%
!! CAACTGTTTTCTTAATTAGA+AGG + chr1_4:35811375-35811394 None:intergenic 25.0%
! TCTAATTAAGAAAACAGTTG+AGG - chr1_4:35811375-35811394 Msa0161200:CDS 25.0%
! AGCTTTCAATATAAACTTGT+TGG - chr1_4:35811432-35811451 Msa0161200:CDS 25.0%
! TGAGAGTTATGTGTTTATAT+GGG - chr1_4:35811521-35811540 Msa0161200:CDS 25.0%
! AGTGACATAAACTTATTACA+AGG + chr1_4:35811825-35811844 None:intergenic 25.0%
!!! AGGGAATAAGTTTGATTTTA+AGG - chr1_4:35811128-35811147 Msa0161200:intron 25.0%
!!! GGGAATAAGTTTGATTTTAA+GGG - chr1_4:35811129-35811148 Msa0161200:intron 25.0%
! AATTTGCAATATATGCCATT+TGG - chr1_4:35811156-35811175 Msa0161200:CDS 25.0%
!! CAATGATACAATGTTTCTAT+TGG - chr1_4:35811244-35811263 Msa0161200:intron 25.0%
! TACTATTAAATCGAGGAATA+GGG + chr1_4:35811350-35811369 None:intergenic 25.0%
! ATACTATTAAATCGAGGAAT+AGG + chr1_4:35811351-35811370 None:intergenic 25.0%
!! CAACTGTTTTCTTAATTAGA+AGG + chr1_4:35811375-35811394 None:intergenic 25.0%
! TCTAATTAAGAAAACAGTTG+AGG - chr1_4:35811375-35811394 Msa0161200:CDS 25.0%
! AGCTTTCAATATAAACTTGT+TGG - chr1_4:35811432-35811451 Msa0161200:CDS 25.0%
! TGAGAGTTATGTGTTTATAT+GGG - chr1_4:35811521-35811540 Msa0161200:CDS 25.0%
! AGTGACATAAACTTATTACA+AGG + chr1_4:35811825-35811844 None:intergenic 25.0%
GATAAACAACCCACATTTAA+TGG - chr1_4:35810825-35810844 Msa0161200:CDS 30.0%
TTGCTTTCTCCATTAAATGT+GGG + chr1_4:35810837-35810856 None:intergenic 30.0%
TTTAGTATTGCATGCAAGTA+TGG + chr1_4:35810925-35810944 None:intergenic 30.0%
TAACTATAAGTGGTACTGTA+GGG + chr1_4:35810966-35810985 None:intergenic 30.0%
TTAACTATAAGTGGTACTGT+AGG + chr1_4:35810967-35810986 None:intergenic 30.0%
GATGCTTCTTTAACTATAAG+TGG + chr1_4:35810976-35810995 None:intergenic 30.0%
ACAAATATAATTGTCTTCGC+TGG + chr1_4:35811030-35811049 None:intergenic 30.0%
!! ATTTGTTGATTTGTGGTCAA+TGG - chr1_4:35811044-35811063 Msa0161200:intron 30.0%
!! TTTGTTGATTTGTGGTCAAT+GGG - chr1_4:35811045-35811064 Msa0161200:intron 30.0%
! GATACAATGTTTCTATTGGA+AGG - chr1_4:35811248-35811267 Msa0161200:intron 30.0%
GAAGGAATACTATTAAATCG+AGG + chr1_4:35811357-35811376 None:intergenic 30.0%
!! ATATAAACTTGTTGGTGATC+AGG - chr1_4:35811440-35811459 Msa0161200:CDS 30.0%
AAAGAAATAAGAGGATGAAG+TGG - chr1_4:35811493-35811512 Msa0161200:CDS 30.0%
CATATAAACACATAACTCTC+AGG + chr1_4:35811522-35811541 None:intergenic 30.0%
CTGAGAGTTATGTGTTTATA+TGG - chr1_4:35811520-35811539 Msa0161200:CDS 30.0%
!!! TCGTATTCTTTGAGTTGTTT+TGG - chr1_4:35811745-35811764 Msa0161200:CDS 30.0%
!!! TTTTTTGGGATCTTGTGTTT+TGG - chr1_4:35811782-35811801 Msa0161200:CDS 30.0%
!!! TTTTTGGGATCTTGTGTTTT+GGG - chr1_4:35811783-35811802 Msa0161200:CDS 30.0%
GATAAACAACCCACATTTAA+TGG - chr1_4:35810825-35810844 Msa0161200:CDS 30.0%
TTGCTTTCTCCATTAAATGT+GGG + chr1_4:35810837-35810856 None:intergenic 30.0%
TTTAGTATTGCATGCAAGTA+TGG + chr1_4:35810925-35810944 None:intergenic 30.0%
TAACTATAAGTGGTACTGTA+GGG + chr1_4:35810966-35810985 None:intergenic 30.0%
TTAACTATAAGTGGTACTGT+AGG + chr1_4:35810967-35810986 None:intergenic 30.0%
GATGCTTCTTTAACTATAAG+TGG + chr1_4:35810976-35810995 None:intergenic 30.0%
ACAAATATAATTGTCTTCGC+TGG + chr1_4:35811030-35811049 None:intergenic 30.0%
!! ATTTGTTGATTTGTGGTCAA+TGG - chr1_4:35811044-35811063 Msa0161200:intron 30.0%
!! TTTGTTGATTTGTGGTCAAT+GGG - chr1_4:35811045-35811064 Msa0161200:intron 30.0%
! GATACAATGTTTCTATTGGA+AGG - chr1_4:35811248-35811267 Msa0161200:intron 30.0%
GAAGGAATACTATTAAATCG+AGG + chr1_4:35811357-35811376 None:intergenic 30.0%
!! ATATAAACTTGTTGGTGATC+AGG - chr1_4:35811440-35811459 Msa0161200:CDS 30.0%
AAAGAAATAAGAGGATGAAG+TGG - chr1_4:35811493-35811512 Msa0161200:CDS 30.0%
CATATAAACACATAACTCTC+AGG + chr1_4:35811522-35811541 None:intergenic 30.0%
CTGAGAGTTATGTGTTTATA+TGG - chr1_4:35811520-35811539 Msa0161200:CDS 30.0%
!!! TCGTATTCTTTGAGTTGTTT+TGG - chr1_4:35811745-35811764 Msa0161200:CDS 30.0%
!!! TTTTTTGGGATCTTGTGTTT+TGG - chr1_4:35811782-35811801 Msa0161200:CDS 30.0%
!!! TTTTTGGGATCTTGTGTTTT+GGG - chr1_4:35811783-35811802 Msa0161200:CDS 30.0%
CTTGCTTTCTCCATTAAATG+TGG + chr1_4:35810838-35810857 None:intergenic 35.0%
TTTAATGGAGAAAGCAAGAC+AGG - chr1_4:35810840-35810859 Msa0161200:CDS 35.0%
! CAATATATGCCATTTGGAAC+TGG - chr1_4:35811162-35811181 Msa0161200:CDS 35.0%
ATCATTGCAGCAAGATTTGT+TGG + chr1_4:35811231-35811250 None:intergenic 35.0%
! TGTTTCTATTGGAAGGTTAG+TGG - chr1_4:35811255-35811274 Msa0161200:intron 35.0%
GATCAGGAGTTTGAATTGAA+AGG - chr1_4:35811456-35811475 Msa0161200:CDS 35.0%
GTGTTTATATGGGTCTGTTT+CGG - chr1_4:35811531-35811550 Msa0161200:CDS 35.0%
ACTCAAAGAATACGACCATA+AGG + chr1_4:35811740-35811759 None:intergenic 35.0%
!!! TTCTTTGAGTTGTTTTGGCA+TGG - chr1_4:35811750-35811769 Msa0161200:CDS 35.0%
!!! TCTTTGAGTTGTTTTGGCAT+GGG - chr1_4:35811751-35811770 Msa0161200:CDS 35.0%
!!! CATGGGTCTTTGGATTTTTT+GGG - chr1_4:35811768-35811787 Msa0161200:CDS 35.0%
CTTGCTTTCTCCATTAAATG+TGG + chr1_4:35810838-35810857 None:intergenic 35.0%
TTTAATGGAGAAAGCAAGAC+AGG - chr1_4:35810840-35810859 Msa0161200:CDS 35.0%
! CAATATATGCCATTTGGAAC+TGG - chr1_4:35811162-35811181 Msa0161200:CDS 35.0%
ATCATTGCAGCAAGATTTGT+TGG + chr1_4:35811231-35811250 None:intergenic 35.0%
! TGTTTCTATTGGAAGGTTAG+TGG - chr1_4:35811255-35811274 Msa0161200:intron 35.0%
GATCAGGAGTTTGAATTGAA+AGG - chr1_4:35811456-35811475 Msa0161200:CDS 35.0%
GTGTTTATATGGGTCTGTTT+CGG - chr1_4:35811531-35811550 Msa0161200:CDS 35.0%
ACTCAAAGAATACGACCATA+AGG + chr1_4:35811740-35811759 None:intergenic 35.0%
!!! TTCTTTGAGTTGTTTTGGCA+TGG - chr1_4:35811750-35811769 Msa0161200:CDS 35.0%
!!! TCTTTGAGTTGTTTTGGCAT+GGG - chr1_4:35811751-35811770 Msa0161200:CDS 35.0%
!!! CATGGGTCTTTGGATTTTTT+GGG - chr1_4:35811768-35811787 Msa0161200:CDS 35.0%
! GCATGCAAGTATGGAAGTTT+TGG + chr1_4:35810916-35810935 None:intergenic 40.0%
ACCATATACGACGCAACTTT+CGG + chr1_4:35810998-35811017 None:intergenic 40.0%
!! TTGATTTGTGGTCAATGGGT+AGG - chr1_4:35811049-35811068 Msa0161200:intron 40.0%
! TGATTTGTGGTCAATGGGTA+GGG - chr1_4:35811050-35811069 Msa0161200:intron 40.0%
CAGAGAGGTTTATGAGTGAA+GGG - chr1_4:35811109-35811128 Msa0161200:intron 40.0%
TATTGGAAGGTTAGTGGTGA+TGG - chr1_4:35811261-35811280 Msa0161200:intron 40.0%
!! TGGTGATGGAACAGTTAACA+TGG - chr1_4:35811275-35811294 Msa0161200:intron 40.0%
! AACCAGCTTTAACACTTCCT+AGG - chr1_4:35811304-35811323 Msa0161200:intron 40.0%
! ACCAGCTTTAACACTTCCTA+GGG - chr1_4:35811305-35811324 Msa0161200:intron 40.0%
! TTCTCCACCTTAGTTCTCAA+TGG - chr1_4:35811405-35811424 Msa0161200:CDS 40.0%
AGTCAATCCAAACAGCCTTA+TGG - chr1_4:35811722-35811741 Msa0161200:CDS 40.0%
AATACGACCATAAGGCTGTT+TGG + chr1_4:35811732-35811751 None:intergenic 40.0%
!!! GCATGGGTCTTTGGATTTTT+TGG - chr1_4:35811767-35811786 Msa0161200:CDS 40.0%
!!! ATCTTGTGTTTTGGGTTGGT+AGG - chr1_4:35811791-35811810 Msa0161200:CDS 40.0%
AGTTTATGTCACTATCAGCG+TGG - chr1_4:35811832-35811851 Msa0161200:CDS 40.0%
! GCATGCAAGTATGGAAGTTT+TGG + chr1_4:35810916-35810935 None:intergenic 40.0%
ACCATATACGACGCAACTTT+CGG + chr1_4:35810998-35811017 None:intergenic 40.0%
!! TTGATTTGTGGTCAATGGGT+AGG - chr1_4:35811049-35811068 Msa0161200:intron 40.0%
! TGATTTGTGGTCAATGGGTA+GGG - chr1_4:35811050-35811069 Msa0161200:intron 40.0%
CAGAGAGGTTTATGAGTGAA+GGG - chr1_4:35811109-35811128 Msa0161200:intron 40.0%
TATTGGAAGGTTAGTGGTGA+TGG - chr1_4:35811261-35811280 Msa0161200:intron 40.0%
!! TGGTGATGGAACAGTTAACA+TGG - chr1_4:35811275-35811294 Msa0161200:intron 40.0%
! AACCAGCTTTAACACTTCCT+AGG - chr1_4:35811304-35811323 Msa0161200:intron 40.0%
! ACCAGCTTTAACACTTCCTA+GGG - chr1_4:35811305-35811324 Msa0161200:intron 40.0%
! TTCTCCACCTTAGTTCTCAA+TGG - chr1_4:35811405-35811424 Msa0161200:CDS 40.0%
AGTCAATCCAAACAGCCTTA+TGG - chr1_4:35811722-35811741 Msa0161200:CDS 40.0%
AATACGACCATAAGGCTGTT+TGG + chr1_4:35811732-35811751 None:intergenic 40.0%
!!! GCATGGGTCTTTGGATTTTT+TGG - chr1_4:35811767-35811786 Msa0161200:CDS 40.0%
!!! ATCTTGTGTTTTGGGTTGGT+AGG - chr1_4:35811791-35811810 Msa0161200:CDS 40.0%
AGTTTATGTCACTATCAGCG+TGG - chr1_4:35811832-35811851 Msa0161200:CDS 40.0%
TCCGAAAGTTGCGTCGTATA+TGG - chr1_4:35810994-35811013 Msa0161200:intron 45.0%
!! AGCGGGTTTTCCCATAGTTT+GGG + chr1_4:35811078-35811097 None:intergenic 45.0%
CCTTCACTCATAAACCTCTC+TGG + chr1_4:35811111-35811130 None:intergenic 45.0%
CCAGAGAGGTTTATGAGTGA+AGG - chr1_4:35811108-35811127 Msa0161200:intron 45.0%
! TGCCATTTGGAACTGGAAGA+AGG - chr1_4:35811169-35811188 Msa0161200:CDS 45.0%
! GCCATTTGGAACTGGAAGAA+GGG - chr1_4:35811170-35811189 Msa0161200:CDS 45.0%
! GAAGTGCTAATGAAGCACCA+GGG + chr1_4:35811200-35811219 None:intergenic 45.0%
! TGAAGTGCTAATGAAGCACC+AGG + chr1_4:35811201-35811220 None:intergenic 45.0%
GGAATAGGGACACACATCAA+AGG + chr1_4:35811336-35811355 None:intergenic 45.0%
GCAACCATTGAGAACTAAGG+TGG + chr1_4:35811412-35811431 None:intergenic 45.0%
GCTGCAACCATTGAGAACTA+AGG + chr1_4:35811415-35811434 None:intergenic 45.0%
!!! GTTGTTTTGGCATGGGTCTT+TGG - chr1_4:35811758-35811777 Msa0161200:CDS 45.0%
!! TGGGATCTTGTGTTTTGGGT+TGG - chr1_4:35811787-35811806 Msa0161200:CDS 45.0%
TCCGAAAGTTGCGTCGTATA+TGG - chr1_4:35810994-35811013 Msa0161200:intron 45.0%
!! AGCGGGTTTTCCCATAGTTT+GGG + chr1_4:35811078-35811097 None:intergenic 45.0%
CCTTCACTCATAAACCTCTC+TGG + chr1_4:35811111-35811130 None:intergenic 45.0%
CCAGAGAGGTTTATGAGTGA+AGG - chr1_4:35811108-35811127 Msa0161200:intron 45.0%
! TGCCATTTGGAACTGGAAGA+AGG - chr1_4:35811169-35811188 Msa0161200:CDS 45.0%
! GCCATTTGGAACTGGAAGAA+GGG - chr1_4:35811170-35811189 Msa0161200:CDS 45.0%
! GAAGTGCTAATGAAGCACCA+GGG + chr1_4:35811200-35811219 None:intergenic 45.0%
! TGAAGTGCTAATGAAGCACC+AGG + chr1_4:35811201-35811220 None:intergenic 45.0%
GGAATAGGGACACACATCAA+AGG + chr1_4:35811336-35811355 None:intergenic 45.0%
GCAACCATTGAGAACTAAGG+TGG + chr1_4:35811412-35811431 None:intergenic 45.0%
GCTGCAACCATTGAGAACTA+AGG + chr1_4:35811415-35811434 None:intergenic 45.0%
!!! GTTGTTTTGGCATGGGTCTT+TGG - chr1_4:35811758-35811777 Msa0161200:CDS 45.0%
!! TGGGATCTTGTGTTTTGGGT+TGG - chr1_4:35811787-35811806 Msa0161200:CDS 45.0%
TGGGTAGGGATCCCAAACTA+TGG - chr1_4:35811064-35811083 Msa0161200:intron 50.0%
GGGTAGGGATCCCAAACTAT+GGG - chr1_4:35811065-35811084 Msa0161200:intron 50.0%
!! GAGCGGGTTTTCCCATAGTT+TGG + chr1_4:35811079-35811098 None:intergenic 50.0%
GCCCTTCTTCCAGTTCCAAA+TGG + chr1_4:35811174-35811193 None:intergenic 50.0%
!! GCCCTAGGAAGTGTTAAAGC+TGG + chr1_4:35811309-35811328 None:intergenic 50.0%
CACATCAAAGGATGAGCCCT+AGG + chr1_4:35811324-35811343 None:intergenic 50.0%
AAGTGTTTGTGACGCCAGCA+AGG + chr1_4:35811860-35811879 None:intergenic 50.0%
TGGGTAGGGATCCCAAACTA+TGG - chr1_4:35811064-35811083 Msa0161200:intron 50.0%
GGGTAGGGATCCCAAACTAT+GGG - chr1_4:35811065-35811084 Msa0161200:intron 50.0%
!! GAGCGGGTTTTCCCATAGTT+TGG + chr1_4:35811079-35811098 None:intergenic 50.0%
GCCCTTCTTCCAGTTCCAAA+TGG + chr1_4:35811174-35811193 None:intergenic 50.0%
!! GCCCTAGGAAGTGTTAAAGC+TGG + chr1_4:35811309-35811328 None:intergenic 50.0%
CACATCAAAGGATGAGCCCT+AGG + chr1_4:35811324-35811343 None:intergenic 50.0%
AAGTGTTTGTGACGCCAGCA+AGG + chr1_4:35811860-35811879 None:intergenic 50.0%
! TCTCTGGCTTGAACTCGAGC+GGG + chr1_4:35811095-35811114 None:intergenic 55.0%
! CTCTCTGGCTTGAACTCGAG+CGG + chr1_4:35811096-35811115 None:intergenic 55.0%
CTATCAGCGTGGTACCTTGC+TGG - chr1_4:35811843-35811862 Msa0161200:CDS 55.0%
! TCTCTGGCTTGAACTCGAGC+GGG + chr1_4:35811095-35811114 None:intergenic 55.0%
! CTCTCTGGCTTGAACTCGAG+CGG + chr1_4:35811096-35811115 None:intergenic 55.0%
CTATCAGCGTGGTACCTTGC+TGG - chr1_4:35811843-35811862 Msa0161200:CDS 55.0%
CGCTCGAGTTCAAGCCAGAG+AGG - chr1_4:35811094-35811113 Msa0161200:intron 60.0%
ACTGGAAGAAGGGCTTGCCC+TGG - chr1_4:35811180-35811199 Msa0161200:CDS 60.0%
CGCTCGAGTTCAAGCCAGAG+AGG - chr1_4:35811094-35811113 Msa0161200:intron 60.0%
ACTGGAAGAAGGGCTTGCCC+TGG - chr1_4:35811180-35811199 Msa0161200:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 35810802 35811881 35810802 ID=Msa0161200;Name=Msa0161200
chr1_4 mRNA 35810802 35811881 35810802 ID=Msa0161200-mRNA-1;Parent=Msa0161200;Name=Msa0161200-mRNA-1;_AED=0.54;_eAED=0.54;_QI=0|0|0|0.33|1|1|3|0|238
chr1_4 exon 35811343 35811881 35811343 ID=Msa0161200-mRNA-1:exon:10688;Parent=Msa0161200-mRNA-1
chr1_4 exon 35811141 35811249 35811141 ID=Msa0161200-mRNA-1:exon:10687;Parent=Msa0161200-mRNA-1
chr1_4 exon 35810802 35810870 35810802 ID=Msa0161200-mRNA-1:exon:10686;Parent=Msa0161200-mRNA-1
chr1_4 CDS 35811343 35811881 35811343 ID=Msa0161200-mRNA-1:cds;Parent=Msa0161200-mRNA-1
chr1_4 CDS 35811141 35811249 35811141 ID=Msa0161200-mRNA-1:cds;Parent=Msa0161200-mRNA-1
chr1_4 CDS 35810802 35810870 35810802 ID=Msa0161200-mRNA-1:cds;Parent=Msa0161200-mRNA-1
Gene Sequence

>Msa0161200

ATGGAGTGGGCTTTGGCTGAGTTGATAAACAACCCACATTTAATGGAGAAAGCAAGACAGGAGATTGATTCAGTAACAGAAAATAGTAGATTAATTCAAGGATCTGATCTTCCAAAACTTCCATACTTGCATGCAATACTAAAAGAAACTCTTAGAATTCACCCTACAGTACCACTTATAGTTAAAGAAGCATCCGAAAGTTGCGTCGTATATGGTTATGATATTCCAGCGAAGACAATTATATTTGTTGATTTGTGGTCAATGGGTAGGGATCCCAAACTATGGGAAAACCCGCTCGAGTTCAAGCCAGAGAGGTTTATGAGTGAAGGGAATAAGTTTGATTTTAAGGGACAGAATTTGCAATATATGCCATTTGGAACTGGAAGAAGGGCTTGCCCTGGTGCTTCATTAGCACTTCAAGCTGTTCCAACAAATCTTGCTGCAATGATACAATGTTTCTATTGGAAGGTTAGTGGTGATGGAACAGTTAACATGGAAGAGAAACCAGCTTTAACACTTCCTAGGGCTCATCCTTTGATCTTTCAATATAAACTTGTTGGTGATCAGGAGTTTGAATTGAAAGGACATTTCATTTACAAAAGAAATAAGAGGATGAAGTGGCGACCTGAGAGTTATGTGTTTATATGGGTCCGTATACCTTGTAATAAGTTTATGTCACTATCAGCGTGGTACCTTGCTGGCGTCACAAACACTTGA
Protein sequence

>Msa0161200

MEWALAELINNPHLMEKARQEIDSVTENSRLIQGSDLPKLPYLHAILKETLRIHPTVPLIVKEASESCVVYGYDIPAKTIIFVDLWSMGRDPKLWENPLEFKPERFMSEGNKFDFKGQNLQYMPFGTGRRACPGASLALQAVPTNLAAMIQCFYWKVSGDGTVNMEEKPALTLPRAHPLIFQYKLVGDQEFELKGHFIYKRNKRMKWRPESYVFIWVRIPCNKFMSLSAWYLAGVTNT*